Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
14:39:37 (17539): wrapper (7.7.26015): starting
14:39:37 (17539): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 14:39:37] Arguments: --nthreads 12
[2024-05-17 14:39:37] Threads: 12
[2024-05-17 14:39:37] Checking for CVMFS
[2024-05-17 14:39:37] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 14:39:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 14:39:37] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 14:39:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 14:39:37] 2.10.1.0 269156 184027 165988 132855 3 64 30272395 45568001 10428 130560 0 1057599859 99.763 648964591 19299 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 14:39:37] CVMFS is ok
[2024-05-17 14:39:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 14:39:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 14:39:37] Further information can be found at the LHC@home message board.
[2024-05-17 14:39:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 14:39:37] Checking for apptainer binary...
[2024-05-17 14:39:37] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 14:39:37] Running /usr/bin/apptainer --version
[2024-05-17 14:39:37] apptainer version 1.1.8-1.el7
[2024-05-17 14:39:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 14:39:38] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0111.triumf.lcg
[2024-05-17 14:39:38] apptainer works
[2024-05-17 14:39:38] Set ATHENA_PROC_NUMBER=12
[2024-05-17 14:39:38] Set ATHENA_CORE_NUMBER=12
[2024-05-17 14:39:38] Starting ATLAS job with PandaID=6208126492
[2024-05-17 14:39:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 15:54:44]  *** The last 200 lines of the pilot log: ***
[2024-05-17 15:54:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 15:54:44]  is_tar=False
[2024-05-17 15:54:44]  lfn=log.38776125._014734.job.log.tgz.1
[2024-05-17 15:54:44]  mtime=0
[2024-05-17 15:54:44]  protocol_id=None
[2024-05-17 15:54:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 15:54:44]  replicas=None
[2024-05-17 15:54:44]  scope=mc23_13p6TeV
[2024-05-17 15:54:44]  status=None
[2024-05-17 15:54:44]  status_code=0
[2024-05-17 15:54:44]  storage_token=
[2024-05-17 15:54:44]  surl=/home/boinc/slots/0/PanDA_Pilot-6208126492/log.38776125._014734.job.log.tgz.1
[2024-05-17 15:54:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/4f/log.38776125._014734.job.log.tgz.1
[2024-05-17 15:54:44]  workdir=None
[2024-05-17 15:54:44] ]
[2024-05-17 15:54:44] 2024-05-17 22:54:14,299 | INFO     | transferring file log.38776125._014734.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208126492/log.38776125._014734.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 15:54:44] 2024-05-17 22:54:14,299 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208126492/log.38776125._014734.job.log.tgz.1 /home/boinc/slots/0/log.38776125._014734.job.log.t
[2024-05-17 15:54:44] 2024-05-17 22:54:14,328 | INFO     | adding to output.list: log.38776125._014734.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/4f/log.38776125._014734.job.log.tg
[2024-05-17 15:54:44] 2024-05-17 22:54:14,330 | INFO     | summary of transferred files:
[2024-05-17 15:54:44] 2024-05-17 22:54:14,330 | INFO     |  -- lfn=log.38776125._014734.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 15:54:44] 2024-05-17 22:54:14,330 | INFO     | stage-out finished correctly
[2024-05-17 15:54:44] 2024-05-17 22:54:16,094 | INFO     | monitor loop #351: job 0:6208126492 is in state 'finished'
[2024-05-17 15:54:44] 2024-05-17 22:54:16,095 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 15:54:44] 2024-05-17 22:54:17,094 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 15:54:44] 2024-05-17 22:54:17,162 | INFO     | job 6208126492 has state=finished
[2024-05-17 15:54:44] 2024-05-17 22:54:17,162 | INFO     | preparing for final server update for job 6208126492 in state='finished'
[2024-05-17 15:54:44] 2024-05-17 22:54:17,163 | INFO     | this job has now completed (state=finished)
[2024-05-17 15:54:44] 2024-05-17 22:54:17,163 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 15:54:44] 2024-05-17 22:54:17,164 | INFO     | job 6208126492 has finished - writing final server update
[2024-05-17 15:54:44] 2024-05-17 22:54:17,164 | INFO     | total number of processed events: 400 (read)
[2024-05-17 15:54:44] 2024-05-17 22:54:17,170 | INFO     | executing command: lscpu
[2024-05-17 15:54:44] 2024-05-17 22:54:17,223 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 15:54:44] 2024-05-17 22:54:17,223 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 15:54:44] 2024-05-17 22:54:17,279 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 15:54:44] 2024-05-17 22:54:18,603 | INFO     | monitor loop #352: job 0:6208126492 is in state 'finished'
[2024-05-17 15:54:44] 2024-05-17 22:54:18,604 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 15:54:44] 2024-05-17 22:54:21,107 | INFO     | monitor loop #353: job 0:6208126492 is in state 'finished'
[2024-05-17 15:54:44] 2024-05-17 22:54:21,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 15:54:44] 2024-05-17 22:54:22,491 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 15:54:44] 2024-05-17 22:54:22,491 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208126492/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 15:54:44] 2024-05-17 22:54:22,492 | INFO     | extracted standard info from prmon json
[2024-05-17 15:54:44] 2024-05-17 22:54:22,492 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 15:54:44] 2024-05-17 22:54:22,492 | WARNING  | GPU info not found in prmon json
[2024-05-17 15:54:44] 2024-05-17 22:54:22,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 15:54:44] 2024-05-17 22:54:22,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 15:54:44] 2024-05-17 22:54:22,494 | INFO     | fitting pss+swap vs Time
[2024-05-17 15:54:44] 2024-05-17 22:54:22,494 | INFO     | model: linear, x: [1715982326.0, 1715982387.0, 1715982448.0, 1715982509.0, 1715982570.0, 1715982631.0, 1715982692.0, 1715982753.0, 1715982814.0, 1715982875.0, 1715
[2024-05-17 15:54:44] 2024-05-17 22:54:22,494 | INFO     | sum of square deviations: 89127252.5
[2024-05-17 15:54:44] 2024-05-17 22:54:22,494 | INFO     | sum of deviations: 17857323366.000004
[2024-05-17 15:54:44] 2024-05-17 22:54:22,494 | INFO     | mean x: 1715984308.5
[2024-05-17 15:54:44] 2024-05-17 22:54:22,494 | INFO     | mean y: 2628868.1818181816
[2024-05-17 15:54:44] 2024-05-17 22:54:22,494 | INFO     | -- intersect: -343807887313.3465
[2024-05-17 15:54:44] 2024-05-17 22:54:22,494 | INFO     | intersect: -343807887313.3465
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | chi2: 2.33710906638481
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | -- intersect: -343807887313.3465
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | current memory leak: 200.36 B/s (using 66 data points, chi2=2.34)
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | ..............................
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | . Timing measurements:
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | . get job = 0 s
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | . initial setup = 2 s
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | . payload setup = 7 s
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | . stage-in = 0 s
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | . payload execution = 4434 s
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | . stage-out = 0 s
[2024-05-17 15:54:44] 2024-05-17 22:54:22,495 | INFO     | . log creation = 0 s
[2024-05-17 15:54:44] 2024-05-17 22:54:22,496 | INFO     | ..............................
[2024-05-17 15:54:44] 2024-05-17 22:54:22,780 | INFO     | 
[2024-05-17 15:54:44] 2024-05-17 22:54:22,781 | INFO     | job summary report
[2024-05-17 15:54:44] 2024-05-17 22:54:22,781 | INFO     | --------------------------------------------------
[2024-05-17 15:54:44] 2024-05-17 22:54:22,781 | INFO     | PanDA job id: 6208126492
[2024-05-17 15:54:44] 2024-05-17 22:54:22,781 | INFO     | task id: 38776125
[2024-05-17 15:54:44] 2024-05-17 22:54:22,781 | INFO     | errors: (none)
[2024-05-17 15:54:44] 2024-05-17 22:54:22,781 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 15:54:44] 2024-05-17 22:54:22,782 | INFO     | pilot state: finished 
[2024-05-17 15:54:44] 2024-05-17 22:54:22,782 | INFO     | transexitcode: 0
[2024-05-17 15:54:44] 2024-05-17 22:54:22,782 | INFO     | exeerrorcode: 0
[2024-05-17 15:54:44] 2024-05-17 22:54:22,782 | INFO     | exeerrordiag: 
[2024-05-17 15:54:44] 2024-05-17 22:54:22,782 | INFO     | exitcode: 0
[2024-05-17 15:54:44] 2024-05-17 22:54:22,782 | INFO     | exitmsg: OK
[2024-05-17 15:54:44] 2024-05-17 22:54:22,782 | INFO     | cpuconsumptiontime: 41937 s
[2024-05-17 15:54:44] 2024-05-17 22:54:22,782 | INFO     | nevents: 400
[2024-05-17 15:54:44] 2024-05-17 22:54:22,783 | INFO     | neventsw: 0
[2024-05-17 15:54:44] 2024-05-17 22:54:22,783 | INFO     | pid: 30487
[2024-05-17 15:54:44] 2024-05-17 22:54:22,783 | INFO     | pgrp: 30487
[2024-05-17 15:54:44] 2024-05-17 22:54:22,783 | INFO     | corecount: 12
[2024-05-17 15:54:44] 2024-05-17 22:54:22,783 | INFO     | event service: False
[2024-05-17 15:54:44] 2024-05-17 22:54:22,783 | INFO     | sizes: {0: 2392068, 1: 2392267, 6: 2392473, 11: 2392501, 4444: 2418601, 4445: 2427555, 4448: 2427739, 4453: 2427909}
[2024-05-17 15:54:44] 2024-05-17 22:54:22,783 | INFO     | --------------------------------------------------
[2024-05-17 15:54:44] 2024-05-17 22:54:22,783 | INFO     | 
[2024-05-17 15:54:44] 2024-05-17 22:54:22,784 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 15:54:44] 2024-05-17 22:54:22,814 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,815 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,815 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,815 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,817 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,817 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,817 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,817 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 15:54:44] 2024-05-17 22:54:22,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,817 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 15:54:44] 2024-05-17 22:54:22,817 | INFO     | job 6208126492 has completed (purged errors)
[2024-05-17 15:54:44] 2024-05-17 22:54:22,818 | INFO     | overall cleanup function is called
[2024-05-17 15:54:44] 2024-05-17 22:54:23,824 | INFO     | --- collectZombieJob: --- 10, [30487]
[2024-05-17 15:54:44] 2024-05-17 22:54:23,824 | INFO     | zombie collector waiting for pid 30487
[2024-05-17 15:54:44] 2024-05-17 22:54:23,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 15:54:44] 2024-05-17 22:54:24,830 | INFO     | collected zombie processes
[2024-05-17 15:54:44] 2024-05-17 22:54:24,830 | INFO     | will now attempt to kill all subprocesses of pid=30487
[2024-05-17 15:54:44] 2024-05-17 22:54:24,989 | INFO     | process IDs to be killed: [30487] (in reverse order)
[2024-05-17 15:54:44] 2024-05-17 22:54:25,104 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 15:54:44] 2024-05-17 22:54:25,105 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 15:54:44] 2024-05-17 22:54:25,116 | INFO     | did not find any defunct processes belonging to 30487
[2024-05-17 15:54:44] 2024-05-17 22:54:25,121 | INFO     | did not find any defunct processes belonging to 30487
[2024-05-17 15:54:44] 2024-05-17 22:54:25,122 | INFO     | ready for new job
[2024-05-17 15:54:44] 2024-05-17 22:54:25,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 15:54:44] 2024-05-17 22:54:25,123 | INFO     | *************************************
[2024-05-17 15:54:44] 2024-05-17 22:54:25,123 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 15:54:44] 2024-05-17 22:54:25,123 | INFO     | *************************************
[2024-05-17 15:54:44] 2024-05-17 22:54:25,123 | INFO     | 
[2024-05-17 15:54:44] 2024-05-17 22:54:25,126 | INFO     | architecture information:
[2024-05-17 15:54:44] 2024-05-17 22:54:25,126 | INFO     | executing command: cat /etc/os-release
[2024-05-17 15:54:44] 2024-05-17 22:54:25,150 | INFO     | cat /etc/os-release:
[2024-05-17 15:54:44] NAME="CentOS Linux"
[2024-05-17 15:54:44] VERSION="7 (Core)"
[2024-05-17 15:54:44] ID="centos"
[2024-05-17 15:54:44] ID_LIKE="rhel fedora"
[2024-05-17 15:54:44] VERSION_ID="7"
[2024-05-17 15:54:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 15:54:44] ANSI_COLOR="0;31"
[2024-05-17 15:54:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 15:54:44] HOME_URL="https://www.centos.org/"
[2024-05-17 15:54:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 15:54:44] 
[2024-05-17 15:54:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 15:54:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 15:54:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 15:54:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 15:54:44] 
[2024-05-17 15:54:44] 2024-05-17 22:54:25,150 | INFO     | *************************************
[2024-05-17 15:54:44] 2024-05-17 22:54:25,654 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 15:54:44] 2024-05-17 22:54:25,679 | INFO     | sufficient remaining disk space (2125352402944 B)
[2024-05-17 15:54:44] 2024-05-17 22:54:25,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 15:54:44] 2024-05-17 22:54:25,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 15:54:44] 2024-05-17 22:54:25,680 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 15:54:44] 2024-05-17 22:54:25,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 15:54:44] 2024-05-17 22:54:25,681 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 15:54:44] 2024-05-17 22:54:25,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 15:54:44] 2024-05-17 22:54:25,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 15:54:44] 2024-05-17 22:54:26,115 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-17 15:54:44] 2024-05-17 22:54:26,116 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-17 15:54:44] 2024-05-17 22:54:26,116 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 15:54:44] 2024-05-17 22:54:26,116 | INFO     | will abort loop
[2024-05-17 15:54:44] 2024-05-17 22:54:26,270 | INFO     | all job control threads have been joined
[2024-05-17 15:54:44] 2024-05-17 22:54:26,624 | INFO     | all data control threads have been joined
[2024-05-17 15:54:44] 2024-05-17 22:54:26,685 | INFO     | [job] retrieve thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:26,802 | INFO     | [job] validate thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:26,816 | INFO     | [data] copytool_in thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:26,858 | INFO     | all payload control threads have been joined
[2024-05-17 15:54:44] 2024-05-17 22:54:26,994 | INFO     | [payload] validate_post thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:27,070 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:27,121 | INFO     | [job] job monitor thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:27,217 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:27,272 | INFO     | [job] control thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:27,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 15:54:44] 2024-05-17 22:54:27,617 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:27,629 | INFO     | [data] control thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:27,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 15:54:44] 2024-05-17 22:54:27,690 | INFO     | [data] copytool_out thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:27,765 | INFO     | [payload] failed_post thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:27,863 | INFO     | [payload] control thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:28,573 | INFO     | [job] queue monitor thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:31,678 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:36,722 | INFO     | job.realtimelogging is not enabled
[2024-05-17 15:54:44] 2024-05-17 22:54:37,728 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 15:54:44] 2024-05-17 22:54:38,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198312277824)>', '<ExcThread(monitor, started 140198025340672)>']
[2024-05-17 15:54:44] 2024-05-17 22:54:39,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 15:54:44] 2024-05-17 22:54:39,747 | INFO     | [monitor] control thread has ended
[2024-05-17 15:54:44] 2024-05-17 22:54:43,889 | INFO     | all workflow threads have been joined
[2024-05-17 15:54:44] 2024-05-17 22:54:43,890 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 15:54:44] 2024-05-17 22:54:43,890 | INFO     | traces error code: 0
[2024-05-17 15:54:44] 2024-05-17 22:54:43,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 15:54:44] 2024-05-17 22:54:43,969 [wrapper] ==== pilot stdout END ====
[2024-05-17 15:54:44] 2024-05-17 22:54:43,972 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 15:54:44] 2024-05-17 22:54:43,976 [wrapper] pilotpid: 21747
[2024-05-17 15:54:44] 2024-05-17 22:54:43,979 [wrapper] Pilot exit status: 0
[2024-05-17 15:54:44] 2024-05-17 22:54:43,994 [wrapper] pandaids: 6208126492
[2024-05-17 15:54:44] 2024-05-17 22:54:44,064 [wrapper] cleanup: SIGTERM to supervisor_pilot 176203 21748
[2024-05-17 15:54:44] 2024-05-17 22:54:44,069 [wrapper] Test setup, not cleaning
[2024-05-17 15:54:44] 2024-05-17 22:54:44,074 [wrapper] ==== wrapper stdout END ====
[2024-05-17 15:54:44] 2024-05-17 22:54:44,078 [wrapper] ==== wrapper stderr END ====
[2024-05-17 15:54:44] 2024-05-17 22:54:44,087 [wrapper] apfmon messages muted
[2024-05-17 15:54:44]  *** Error codes and diagnostics ***
[2024-05-17 15:54:44]     "exeErrorCode": 0,
[2024-05-17 15:54:44]     "exeErrorDiag": "",
[2024-05-17 15:54:44]     "pilotErrorCode": 0,
[2024-05-17 15:54:44]     "pilotErrorDiag": "",
[2024-05-17 15:54:44]  *** Listing of results directory ***
[2024-05-17 15:54:44] total 834128
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc    467845 May 17 07:44 pilot3.tar.gz
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc      5633 May 17 07:51 queuedata.json
[2024-05-17 15:54:44] -rwx------ 1 boinc boinc     32251 May 17 07:52 runpilot2-wrapper.sh
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc       100 May 17 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 15:54:44] -rwxr-xr-x 1 boinc boinc      7986 May 17 14:39 run_atlas
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc       105 May 17 14:39 job.xml
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc      6622 May 17 14:39 init_data.xml
[2024-05-17 15:54:44] -rw-r--r-- 2 boinc boinc 599974933 May 17 14:39 EVNT.38776119._000048.pool.root.1
[2024-05-17 15:54:44] -rw-r--r-- 2 boinc boinc     17537 May 17 14:39 start_atlas.sh
[2024-05-17 15:54:44] drwxrwx--x 2 boinc boinc      4096 May 17 14:39 shared
[2024-05-17 15:54:44] -rw-r--r-- 2 boinc boinc    480012 May 17 14:39 input.tar.gz
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc         0 May 17 14:39 boinc_lockfile
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc      2632 May 17 14:39 pandaJob.out
[2024-05-17 15:54:44] -rw------- 1 boinc boinc       424 May 17 14:39 setup.sh.local
[2024-05-17 15:54:44] -rw------- 1 boinc boinc   1019089 May 17 14:39 agis_schedconf.cvmfs.json
[2024-05-17 15:54:44] -rw------- 1 boinc boinc         0 May 17 14:39 agis_ddmendpoints.agis.ALL.json
[2024-05-17 15:54:44] -rw------- 1 boinc boinc   1324701 May 17 14:39 cric_ddmendpoints.json
[2024-05-17 15:54:44] drwx------ 4 boinc boinc      4096 May 17 14:39 pilot3
[2024-05-17 15:54:44] -rw------- 1 boinc boinc 249014584 May 17 15:53 HITS.38776125._014734.pool.root.1
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc       530 May 17 15:53 boinc_task_state.xml
[2024-05-17 15:54:44] -rw------- 1 boinc boinc        95 May 17 15:54 pilot_heartbeat.json
[2024-05-17 15:54:44] -rw------- 1 boinc boinc      1056 May 17 15:54 memory_monitor_summary.json
[2024-05-17 15:54:44] -rw------- 1 boinc boinc    366177 May 17 15:54 log.38776125._014734.job.log.tgz.1
[2024-05-17 15:54:44] -rw------- 1 boinc boinc      7772 May 17 15:54 heartbeat.json
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc      8192 May 17 15:54 boinc_mmap_file
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc        27 May 17 15:54 wrapper_checkpoint.txt
[2024-05-17 15:54:44] -rw------- 1 boinc boinc      4591 May 17 15:54 pilotlog.txt
[2024-05-17 15:54:44] -rw------- 1 boinc boinc    444164 May 17 15:54 log.38776125._014734.job.log.1
[2024-05-17 15:54:44] -rw------- 1 boinc boinc       357 May 17 15:54 output.list
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc       620 May 17 15:54 runtime_log
[2024-05-17 15:54:44] -rw------- 1 boinc boinc    829440 May 17 15:54 result.tar.gz
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc     11286 May 17 15:54 runtime_log.err
[2024-05-17 15:54:44] -rw------- 1 boinc boinc       653 May 17 15:54 NdsMDms7DS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmaBRKDmRNjurn.diag
[2024-05-17 15:54:44] -rw-r--r-- 1 boinc boinc     21847 May 17 15:54 stderr.txt
[2024-05-17 15:54:44] HITS file was successfully produced:
[2024-05-17 15:54:44] -rw------- 1 boinc boinc 249014584 May 17 15:53 shared/HITS.pool.root.1
[2024-05-17 15:54:44]  *** Contents of shared directory: ***
[2024-05-17 15:54:44] total 830408
[2024-05-17 15:54:44] -rw-r--r-- 2 boinc boinc 599974933 May 17 14:39 ATLAS.root_0
[2024-05-17 15:54:44] -rw-r--r-- 2 boinc boinc     17537 May 17 14:39 start_atlas.sh
[2024-05-17 15:54:44] -rw-r--r-- 2 boinc boinc    480012 May 17 14:39 input.tar.gz
[2024-05-17 15:54:44] -rw------- 1 boinc boinc 249014584 May 17 15:53 HITS.pool.root.1
[2024-05-17 15:54:44] -rw------- 1 boinc boinc    829440 May 17 15:54 result.tar.gz
15:54:46 (17539): run_atlas exited; CPU time 41615.277330
15:54:46 (17539): called boinc_finish(0)

</stderr_txt>
]]>

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