Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:09:03 (56227): wrapper (7.7.26015): starting
14:09:03 (56227): wrapper: running run_atlas (--nthreads 4)
[2024-05-21 14:09:03] Arguments: --nthreads 4
[2024-05-21 14:09:03] Threads: 4
[2024-05-21 14:09:03] Checking for CVMFS
[2024-05-21 14:09:03] No cvmfs_config command found, will try listing directly
[2024-05-21 14:09:03] CVMFS is ok
[2024-05-21 14:09:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-21 14:09:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-21 14:09:03] Further information can be found at the LHC@home message board.
[2024-05-21 14:09:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-21 14:09:03] Checking for apptainer binary...
[2024-05-21 14:09:03] which: no apptainer in ((null))
[2024-05-21 14:09:03] apptainer is not installed, using version from CVMFS
[2024-05-21 14:09:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-21 14:09:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2024-05-21 14:09:04] apptainer works
[2024-05-21 14:09:04] Set ATHENA_PROC_NUMBER=4
[2024-05-21 14:09:04] Set ATHENA_CORE_NUMBER=4
[2024-05-21 14:09:04] Starting ATLAS job with PandaID=6208126093
[2024-05-21 14:09:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-21 17:15:04]  *** The last 200 lines of the pilot log: ***
[2024-05-21 17:15:04] 2024-05-21 15:07:52,821 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-21 17:15:04] 2024-05-21 15:07:52,821 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-21 17:15:04] 2024-05-21 15:07:52,823 | INFO     | fitting pss+swap vs Time
[2024-05-21 17:15:04] 2024-05-21 15:07:52,824 | INFO     | model: linear, x: [1716293373.0, 1716293434.0, 1716293495.0, 1716293556.0, 1716293617.0, 1716293678.0, 1716293739.0, 1716293800.0, 1716293861.0, 1716293922.0, 1716
[2024-05-21 17:15:04] 2024-05-21 15:07:52,824 | INFO     | sum of square deviations: 1690450300.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,824 | INFO     | sum of deviations: 59778860093.00003
[2024-05-21 17:15:04] 2024-05-21 15:07:52,824 | INFO     | mean x: 1716298710.5
[2024-05-21 17:15:04] 2024-05-21 15:07:52,825 | INFO     | mean y: 2271349.7613636362
[2024-05-21 17:15:04] 2024-05-21 15:07:52,825 | INFO     | -- intersect: -60690657920.490395
[2024-05-21 17:15:04] 2024-05-21 15:07:52,825 | INFO     | intersect: -60690657920.490395
[2024-05-21 17:15:04] 2024-05-21 15:07:52,825 | INFO     | chi2: 5.1002283972156475
[2024-05-21 17:15:04] 2024-05-21 15:07:52,825 | INFO     | model: linear, x: [1716293373.0, 1716293434.0, 1716293495.0, 1716293556.0, 1716293617.0, 1716293678.0, 1716293739.0, 1716293800.0, 1716293861.0, 1716293922.0, 1716
[2024-05-21 17:15:04] 2024-05-21 15:07:52,825 | INFO     | sum of square deviations: 1550429070.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,826 | INFO     | sum of deviations: 69072561392.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,826 | INFO     | mean x: 1716298558.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,826 | INFO     | mean y: 2281192.3157894737
[2024-05-21 17:15:04] 2024-05-21 15:07:52,826 | INFO     | -- intersect: -76459867130.57141
[2024-05-21 17:15:04] 2024-05-21 15:07:52,826 | INFO     | intersect: -76459867130.57141
[2024-05-21 17:15:04] 2024-05-21 15:07:52,826 | INFO     | chi2: 4.323372203369953
[2024-05-21 17:15:04] 2024-05-21 15:07:52,826 | INFO     | current chi2=4.323372203369953 (change=15.231792252084267 %)
[2024-05-21 17:15:04] 2024-05-21 15:07:52,826 | INFO     | right removable region: 170
[2024-05-21 17:15:04] 2024-05-21 15:07:52,827 | INFO     | model: linear, x: [1716293678.0, 1716293739.0, 1716293800.0, 1716293861.0, 1716293922.0, 1716293983.0, 1716294044.0, 1716294105.0, 1716294166.0, 1716294227.0, 1716
[2024-05-21 17:15:04] 2024-05-21 15:07:52,827 | INFO     | sum of square deviations: 1550429070.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,827 | INFO     | sum of deviations: 20377315045.000008
[2024-05-21 17:15:04] 2024-05-21 15:07:52,827 | INFO     | mean x: 1716298863.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,827 | INFO     | mean y: 2314114.7251461986
[2024-05-21 17:15:04] 2024-05-21 15:07:52,827 | INFO     | -- intersect: -22555030377.48455
[2024-05-21 17:15:04] 2024-05-21 15:07:52,828 | INFO     | intersect: -22555030377.48455
[2024-05-21 17:15:04] 2024-05-21 15:07:52,828 | INFO     | chi2: 2.653959673025518
[2024-05-21 17:15:04] 2024-05-21 15:07:52,828 | INFO     | current chi2=2.653959673025518 (change=47.963905411091275 %)
[2024-05-21 17:15:04] 2024-05-21 15:07:52,828 | INFO     | model: linear, x: [1716293983.0, 1716294044.0, 1716294105.0, 1716294166.0, 1716294227.0, 1716294288.0, 1716294349.0, 1716294410.0, 1716294471.0, 1716294532.0, 1716
[2024-05-21 17:15:04] 2024-05-21 15:07:52,828 | INFO     | sum of square deviations: 1418361477.5
[2024-05-21 17:15:04] 2024-05-21 15:07:52,829 | INFO     | sum of deviations: -13995869798.5
[2024-05-21 17:15:04] 2024-05-21 15:07:52,829 | INFO     | mean x: 1716299015.5
[2024-05-21 17:15:04] 2024-05-21 15:07:52,829 | INFO     | mean y: 2353809.9096385543
[2024-05-21 17:15:04] 2024-05-21 15:07:52,829 | INFO     | -- intersect: 16938161738.485968
[2024-05-21 17:15:04] 2024-05-21 15:07:52,829 | INFO     | intersect: 16938161738.485968
[2024-05-21 17:15:04] 2024-05-21 15:07:52,829 | INFO     | chi2: 0.9534399300895393
[2024-05-21 17:15:04] 2024-05-21 15:07:52,829 | INFO     | current chi2=0.9534399300895393 (change=64.07481470874738 %)
[2024-05-21 17:15:04] 2024-05-21 15:07:52,829 | INFO     | model: linear, x: [1716294288.0, 1716294349.0, 1716294410.0, 1716294471.0, 1716294532.0, 1716294593.0, 1716294654.0, 1716294715.0, 1716294776.0, 1716294837.0, 1716
[2024-05-21 17:15:04] 2024-05-21 15:07:52,829 | INFO     | sum of square deviations: 1294014960.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,830 | INFO     | sum of deviations: -19954686854.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,830 | INFO     | mean x: 1716299168.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,830 | INFO     | mean y: 2360995.434782609
[2024-05-21 17:15:04] 2024-05-21 15:07:52,830 | INFO     | -- intersect: 26468988896.877853
[2024-05-21 17:15:04] 2024-05-21 15:07:52,830 | INFO     | intersect: 26468988896.877853
[2024-05-21 17:15:04] 2024-05-21 15:07:52,830 | INFO     | chi2: 0.8363457580292109
[2024-05-21 17:15:04] 2024-05-21 15:07:52,831 | INFO     | current chi2=0.8363457580292109 (change=12.28123223760221 %)
[2024-05-21 17:15:04] 2024-05-21 15:07:52,831 | INFO     | left removable region: 30
[2024-05-21 17:15:04] 2024-05-21 15:07:52,831 | INFO     | model: linear, x: [1716295203.0, 1716295264.0, 1716295325.0, 1716295386.0, 1716295447.0, 1716295508.0, 1716295569.0, 1716295630.0, 1716295691.0, 1716295752.0, 1716
[2024-05-21 17:15:04] 2024-05-21 15:07:52,831 | INFO     | sum of square deviations: 850825255.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,831 | INFO     | sum of deviations: -7010337587.0
[2024-05-21 17:15:04] 2024-05-21 15:07:52,831 | INFO     | mean x: 1716299442.5
[2024-05-21 17:15:04] 2024-05-21 15:07:52,831 | INFO     | mean y: 2371433.685714286
[2024-05-21 17:15:04] 2024-05-21 15:07:52,832 | INFO     | -- intersect: 14143745848.22974
[2024-05-21 17:15:04] 2024-05-21 15:07:52,832 | INFO     | intersect: 14143745848.22974
[2024-05-21 17:15:04] 2024-05-21 15:07:52,832 | INFO     | chi2: 0.011472400273961294
[2024-05-21 17:15:04] 2024-05-21 15:07:52,832 | INFO     | -- intersect: 14143745848.22974
[2024-05-21 17:15:04] 2024-05-21 15:07:52,832 | INFO     | current memory leak: -8.24 B/s (using 140 data points, chi2=0.01)
[2024-05-21 17:15:04] 2024-05-21 15:07:52,832 | INFO     | ..............................
[2024-05-21 17:15:04] 2024-05-21 15:07:52,832 | INFO     | . Timing measurements:
[2024-05-21 17:15:04] 2024-05-21 15:07:52,832 | INFO     | . get job = 0 s
[2024-05-21 17:15:04] 2024-05-21 15:07:52,833 | INFO     | . initial setup = 1 s
[2024-05-21 17:15:04] 2024-05-21 15:07:52,833 | INFO     | . payload setup = 4 s
[2024-05-21 17:15:04] 2024-05-21 15:07:52,833 | INFO     | . stage-in = 0 s
[2024-05-21 17:15:04] 2024-05-21 15:07:52,833 | INFO     | . payload execution = 10689 s
[2024-05-21 17:15:04] 2024-05-21 15:07:52,833 | INFO     | . stage-out = 0 s
[2024-05-21 17:15:04] 2024-05-21 15:07:52,833 | INFO     | . log creation = 0 s
[2024-05-21 17:15:04] 2024-05-21 15:07:52,833 | INFO     | ..............................
[2024-05-21 17:15:04] 2024-05-21 15:07:53,108 | INFO     | 
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | job summary report
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | --------------------------------------------------
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | PanDA job id: 6208126093
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | task id: 38776125
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | errors: (none)
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | pilot state: finished 
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | transexitcode: 0
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | exeerrorcode: 0
[2024-05-21 17:15:04] 2024-05-21 15:07:53,109 | INFO     | exeerrordiag: 
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | exitcode: 0
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | exitmsg: OK
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | cpuconsumptiontime: 39824 s
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | nevents: 400
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | neventsw: 0
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | pid: 67238
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | pgrp: 67238
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | corecount: 4
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | event service: False
[2024-05-21 17:15:04] 2024-05-21 15:07:53,110 | INFO     | sizes: {0: 2392030, 1: 2392229, 4: 2392435, 11: 2392463, 10697: 2421481, 10698: 2430463, 10702: 2430647, 10707: 2430817}
[2024-05-21 17:15:04] 2024-05-21 15:07:53,111 | INFO     | --------------------------------------------------
[2024-05-21 17:15:04] 2024-05-21 15:07:53,111 | INFO     | 
[2024-05-21 17:15:04] 2024-05-21 15:07:53,111 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-05-21 17:15:04] 2024-05-21 15:07:53,129 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,130 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,130 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,130 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,130 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,130 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,130 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,131 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,131 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,131 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,131 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,131 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,131 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-21 17:15:04] 2024-05-21 15:07:53,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,132 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-21 17:15:04] 2024-05-21 15:07:53,132 | INFO     | job 6208126093 has completed (purged errors)
[2024-05-21 17:15:04] 2024-05-21 15:07:53,132 | INFO     | overall cleanup function is called
[2024-05-21 17:15:04] 2024-05-21 15:07:54,138 | INFO     | --- collectZombieJob: --- 10, [67238]
[2024-05-21 17:15:04] 2024-05-21 15:07:54,138 | INFO     | zombie collector waiting for pid 67238
[2024-05-21 17:15:04] 2024-05-21 15:07:54,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-21 17:15:04] 2024-05-21 15:07:55,144 | INFO     | collected zombie processes
[2024-05-21 17:15:04] 2024-05-21 15:07:55,144 | INFO     | will now attempt to kill all subprocesses of pid=67238
[2024-05-21 17:15:04] 2024-05-21 15:07:55,292 | INFO     | process IDs to be killed: [67238] (in reverse order)
[2024-05-21 17:15:04] 2024-05-21 15:07:55,359 | WARNING  | found no corresponding commands to process id(s)
[2024-05-21 17:15:04] 2024-05-21 15:07:55,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-21 17:15:04] 2024-05-21 15:07:55,368 | INFO     | did not find any defunct processes belonging to 67238
[2024-05-21 17:15:04] 2024-05-21 15:07:55,375 | INFO     | did not find any defunct processes belonging to 67238
[2024-05-21 17:15:04] 2024-05-21 15:07:55,375 | INFO     | ready for new job
[2024-05-21 17:15:04] 2024-05-21 15:07:55,376 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-21 17:15:04] 2024-05-21 15:07:55,377 | INFO     | *************************************
[2024-05-21 17:15:04] 2024-05-21 15:07:55,378 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-21 17:15:04] 2024-05-21 15:07:55,378 | INFO     | *************************************
[2024-05-21 17:15:04] 2024-05-21 15:07:55,378 | INFO     | 
[2024-05-21 17:15:04] 2024-05-21 15:07:55,380 | INFO     | architecture information:
[2024-05-21 17:15:04] 2024-05-21 15:07:55,380 | INFO     | executing command: cat /etc/os-release
[2024-05-21 17:15:04] 2024-05-21 15:07:55,394 | INFO     | cat /etc/os-release:
[2024-05-21 17:15:04] NAME="CentOS Linux"
[2024-05-21 17:15:04] VERSION="7 (Core)"
[2024-05-21 17:15:04] ID="centos"
[2024-05-21 17:15:04] ID_LIKE="rhel fedora"
[2024-05-21 17:15:04] VERSION_ID="7"
[2024-05-21 17:15:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-21 17:15:04] ANSI_COLOR="0;31"
[2024-05-21 17:15:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-21 17:15:04] HOME_URL="https://www.centos.org/"
[2024-05-21 17:15:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-21 17:15:04] 
[2024-05-21 17:15:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-21 17:15:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-21 17:15:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-21 17:15:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-21 17:15:04] 
[2024-05-21 17:15:04] 2024-05-21 15:07:55,394 | INFO     | *************************************
[2024-05-21 17:15:04] 2024-05-21 15:07:55,897 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-05-21 17:15:04] 2024-05-21 15:07:55,916 | INFO     | sufficient remaining disk space (1623393828864 B)
[2024-05-21 17:15:04] 2024-05-21 15:07:55,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-21 17:15:04] 2024-05-21 15:07:55,916 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-21 17:15:04] 2024-05-21 15:07:55,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-21 17:15:04] 2024-05-21 15:07:55,917 | INFO     | aborting loop
[2024-05-21 17:15:04] 2024-05-21 15:07:56,627 | INFO     | found 0 job(s) in 20 queues
[2024-05-21 17:15:04] 2024-05-21 15:07:56,627 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-21 17:15:04] 2024-05-21 15:07:56,627 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-21 17:15:04] 2024-05-21 15:07:56,684 | INFO     | all data control threads have been joined
[2024-05-21 17:15:04] 2024-05-21 15:07:56,921 | INFO     | [job] retrieve thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:56,922 | INFO     | [job] job monitor thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:56,997 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-21 17:15:04] 2024-05-21 15:07:57,028 | INFO     | [payload] validate_post thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:57,078 | INFO     | [job] create_data_payload thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:57,114 | INFO     | [job] validate thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:57,330 | INFO     | all payload control threads have been joined
[2024-05-21 17:15:04] 2024-05-21 15:07:57,335 | INFO     | [payload] execute_payloads thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:57,348 | INFO     | [payload] validate_pre thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:57,427 | INFO     | all job control threads have been joined
[2024-05-21 17:15:04] 2024-05-21 15:07:57,614 | INFO     | [data] copytool_in thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:57,689 | INFO     | [data] control thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:57,901 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-21 17:15:04] 2024-05-21 15:07:57,986 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-21 17:15:04] 2024-05-21 15:07:58,253 | INFO     | [payload] failed_post thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:58,335 | INFO     | [payload] control thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:58,432 | INFO     | [job] control thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:58,906 | INFO     | [job] queue monitor thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:07:59,002 | INFO     | [data] copytool_out thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:08:01,991 | INFO     | [data] queue_monitor thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:08:06,592 | INFO     | job.realtimelogging is not enabled
[2024-05-21 17:15:04] 2024-05-21 15:08:07,597 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-21 17:15:04] 2024-05-21 15:08:08,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47960709424192)>', '<ExcThread(monitor, started 47960878573312)>']
[2024-05-21 17:15:04] 2024-05-21 15:08:09,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-21 17:15:04] 2024-05-21 15:08:09,680 | INFO     | [monitor] control thread has ended
[2024-05-21 17:15:04] 2024-05-21 15:08:14,011 | INFO     | all workflow threads have been joined
[2024-05-21 17:15:04] 2024-05-21 15:08:14,011 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-21 17:15:04] 2024-05-21 15:08:14,012 | INFO     | traces error code: 0
[2024-05-21 17:15:04] 2024-05-21 15:08:14,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-21 17:15:04] 2024-05-21 15:08:14,080 [wrapper] ==== pilot stdout END ====
[2024-05-21 17:15:04] 2024-05-21 15:08:14,082 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-21 17:15:04] 2024-05-21 15:08:14,084 [wrapper] pilotpid: 60417
[2024-05-21 17:15:04] 2024-05-21 15:08:14,086 [wrapper] Pilot exit status: 0
[2024-05-21 17:15:04] 2024-05-21 15:08:14,093 [wrapper] pandaids: 6208126093
[2024-05-21 17:15:04] 2024-05-21 15:08:14,140 [wrapper] cleanup: SIGTERM to supervisor_pilot  232808 60418
[2024-05-21 17:15:04] 2024-05-21 15:08:14,142 [wrapper] Test setup, not cleaning
[2024-05-21 17:15:04] 2024-05-21 15:08:14,144 [wrapper] ==== wrapper stdout END ====
[2024-05-21 17:15:04] 2024-05-21 15:08:14,146 [wrapper] ==== wrapper stderr END ====
[2024-05-21 17:15:04] 2024-05-21 15:08:14,150 [wrapper] apfmon messages muted
[2024-05-21 17:15:04]  *** Error codes and diagnostics ***
[2024-05-21 17:15:04]     "exeErrorCode": 0,
[2024-05-21 17:15:04]     "exeErrorDiag": "",
[2024-05-21 17:15:04]     "pilotErrorCode": 0,
[2024-05-21 17:15:04]     "pilotErrorDiag": "",
[2024-05-21 17:15:04]  *** Listing of results directory ***
[2024-05-21 17:15:04] total 834780
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc    467845 May 17 16:23 pilot3.tar.gz
[2024-05-21 17:15:04] -rwx------ 1 boinc boinc     32251 May 17 16:28 runpilot2-wrapper.sh
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc      5633 May 17 16:28 queuedata.json
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc       100 May 21 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-21 17:15:04] -rwxr-xr-x 1 boinc boinc      7986 May 21 14:08 run_atlas
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc       105 May 21 14:08 job.xml
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc      6456 May 21 14:09 init_data.xml
[2024-05-21 17:15:04] -rw-r--r-- 2 boinc boinc 599591287 May 21 14:09 EVNT.38776119._000106.pool.root.1
[2024-05-21 17:15:04] drwxrwx--x 2 boinc boinc      4096 May 21 14:09 shared
[2024-05-21 17:15:04] -rw-r--r-- 2 boinc boinc    480011 May 21 14:09 input.tar.gz
[2024-05-21 17:15:04] -rw-r--r-- 2 boinc boinc     17537 May 21 14:09 start_atlas.sh
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc         0 May 21 14:09 boinc_lockfile
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc      2631 May 21 14:09 pandaJob.out
[2024-05-21 17:15:04] -rw------- 1 boinc boinc       424 May 21 14:09 setup.sh.local
[2024-05-21 17:15:04] -rw------- 1 boinc boinc   1013557 May 21 14:09 agis_schedconf.cvmfs.json
[2024-05-21 17:15:04] -rw------- 1 boinc boinc         0 May 21 14:09 agis_ddmendpoints.agis.ALL.json
[2024-05-21 17:15:04] -rw------- 1 boinc boinc   1324700 May 21 14:09 cric_ddmendpoints.json
[2024-05-21 17:15:04] drwx------ 4 boinc boinc      4096 May 21 14:09 pilot3
[2024-05-21 17:15:04] -rw------- 1 boinc boinc 248864782 May 21 17:07 HITS.38776125._014558.pool.root.1
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc       531 May 21 17:07 boinc_task_state.xml
[2024-05-21 17:15:04] -rw------- 1 boinc boinc        95 May 21 17:07 pilot_heartbeat.json
[2024-05-21 17:15:04] -rw------- 1 boinc boinc      1049 May 21 17:07 memory_monitor_summary.json
[2024-05-21 17:15:04] -rw------- 1 boinc boinc    298150 May 21 17:07 log.38776125._014558.job.log.tgz.1
[2024-05-21 17:15:04] -rw------- 1 boinc boinc      7764 May 21 17:07 heartbeat.json
[2024-05-21 17:15:04] -rw------- 1 boinc boinc      4294 May 21 17:08 pilotlog.txt
[2024-05-21 17:15:04] -rw------- 1 boinc boinc   1115912 May 21 17:08 log.38776125._014558.job.log.1
[2024-05-21 17:15:04] -rw------- 1 boinc boinc       357 May 21 17:08 output.list
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc       620 May 21 17:08 runtime_log
[2024-05-21 17:15:04] -rw------- 1 boinc boinc   1433600 May 21 17:08 result.tar.gz
[2024-05-21 17:15:04] -rw------- 1 boinc boinc       658 May 21 17:08 zJoKDmakDS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmb9QKDmSNqHtn.diag
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc     11410 May 21 17:08 runtime_log.err
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc        27 May 21 17:15 wrapper_checkpoint.txt
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc      8192 May 21 17:15 boinc_mmap_file
[2024-05-21 17:15:04] -rw-r--r-- 1 boinc boinc     21262 May 21 17:15 stderr.txt
[2024-05-21 17:15:04] HITS file was successfully produced:
[2024-05-21 17:15:04] -rw------- 1 boinc boinc 248864782 May 21 17:07 shared/HITS.pool.root.1
[2024-05-21 17:15:04]  *** Contents of shared directory: ***
[2024-05-21 17:15:04] total 830476
[2024-05-21 17:15:04] -rw-r--r-- 2 boinc boinc 599591287 May 21 14:09 ATLAS.root_0
[2024-05-21 17:15:04] -rw-r--r-- 2 boinc boinc    480011 May 21 14:09 input.tar.gz
[2024-05-21 17:15:04] -rw-r--r-- 2 boinc boinc     17537 May 21 14:09 start_atlas.sh
[2024-05-21 17:15:04] -rw------- 1 boinc boinc 248864782 May 21 17:07 HITS.pool.root.1
[2024-05-21 17:15:04] -rw------- 1 boinc boinc   1433600 May 21 17:08 result.tar.gz
17:15:06 (56227): run_atlas exited; CPU time 39598.884540
17:15:06 (56227): called boinc_finish(0)

</stderr_txt>
]]>

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