Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
14:38:00 (155211): wrapper (7.7.26015): starting
14:38:00 (155211): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 14:38:00] Arguments: --nthreads 12
[2024-05-17 14:38:00] Threads: 12
[2024-05-17 14:38:00] Checking for CVMFS
[2024-05-17 14:38:00] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 14:38:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 14:38:00] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 14:38:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 14:38:01] 2.10.1.0 79574 20496 122268 132855 0 64 25569917 45568001 11016 130560 0 100265553 99.842 43901785 19765 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-17 14:38:01] CVMFS is ok
[2024-05-17 14:38:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 14:38:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 14:38:01] Further information can be found at the LHC@home message board.
[2024-05-17 14:38:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 14:38:01] Checking for apptainer binary...
[2024-05-17 14:38:01] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 14:38:01] Running /usr/bin/apptainer --version
[2024-05-17 14:38:01] apptainer version 1.1.8-1.el7
[2024-05-17 14:38:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 14:38:02] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0040.triumf.lcg
[2024-05-17 14:38:02] apptainer works
[2024-05-17 14:38:02] Set ATHENA_PROC_NUMBER=12
[2024-05-17 14:38:02] Set ATHENA_CORE_NUMBER=12
[2024-05-17 14:38:02] Starting ATLAS job with PandaID=6208106399
[2024-05-17 14:38:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 15:56:49]  *** The last 200 lines of the pilot log: ***
[2024-05-17 15:56:49]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 15:56:49]  is_tar=False
[2024-05-17 15:56:49]  lfn=log.38776146._015357.job.log.tgz.1
[2024-05-17 15:56:49]  mtime=0
[2024-05-17 15:56:49]  protocol_id=None
[2024-05-17 15:56:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 15:56:49]  replicas=None
[2024-05-17 15:56:49]  scope=mc23_13p6TeV
[2024-05-17 15:56:49]  status=None
[2024-05-17 15:56:49]  status_code=0
[2024-05-17 15:56:49]  storage_token=
[2024-05-17 15:56:49]  surl=/home/boinc/slots/0/PanDA_Pilot-6208106399/log.38776146._015357.job.log.tgz.1
[2024-05-17 15:56:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/c1/log.38776146._015357.job.log.tgz.1
[2024-05-17 15:56:49]  workdir=None
[2024-05-17 15:56:49] ]
[2024-05-17 15:56:49] 2024-05-17 22:56:25,221 | INFO     | transferring file log.38776146._015357.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208106399/log.38776146._015357.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 15:56:49] 2024-05-17 22:56:25,221 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208106399/log.38776146._015357.job.log.tgz.1 /home/boinc/slots/0/log.38776146._015357.job.log.t
[2024-05-17 15:56:49] 2024-05-17 22:56:25,243 | INFO     | adding to output.list: log.38776146._015357.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/c1/log.38776146._015357.job.log.tg
[2024-05-17 15:56:49] 2024-05-17 22:56:25,244 | INFO     | summary of transferred files:
[2024-05-17 15:56:49] 2024-05-17 22:56:25,244 | INFO     |  -- lfn=log.38776146._015357.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 15:56:49] 2024-05-17 22:56:25,244 | INFO     | stage-out finished correctly
[2024-05-17 15:56:49] 2024-05-17 22:56:25,877 | WARNING  | process 165888 is no longer using CPU - aborting
[2024-05-17 15:56:49] 2024-05-17 22:56:25,878 | INFO     | will not send any job update
[2024-05-17 15:56:49] 2024-05-17 22:56:26,477 | INFO     | 4696s have passed since pilot start
[2024-05-17 15:56:49] 2024-05-17 22:56:27,593 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 15:56:49] 2024-05-17 22:56:28,380 | INFO     | monitor loop #368: job 0:6208106399 is in state 'finished'
[2024-05-17 15:56:49] 2024-05-17 22:56:28,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 15:56:49] 2024-05-17 22:56:30,159 | INFO     | job 6208106399 has state=finished
[2024-05-17 15:56:49] 2024-05-17 22:56:30,159 | INFO     | preparing for final server update for job 6208106399 in state='finished'
[2024-05-17 15:56:49] 2024-05-17 22:56:30,160 | INFO     | this job has now completed (state=finished)
[2024-05-17 15:56:49] 2024-05-17 22:56:30,160 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 15:56:49] 2024-05-17 22:56:30,160 | INFO     | job 6208106399 has finished - writing final server update
[2024-05-17 15:56:49] 2024-05-17 22:56:30,161 | INFO     | total number of processed events: 400 (read)
[2024-05-17 15:56:49] 2024-05-17 22:56:30,168 | INFO     | executing command: lscpu
[2024-05-17 15:56:49] 2024-05-17 22:56:30,230 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 15:56:49] 2024-05-17 22:56:30,231 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 15:56:49] 2024-05-17 22:56:30,280 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 15:56:49] 2024-05-17 22:56:30,883 | INFO     | monitor loop #369: job 0:6208106399 is in state 'finished'
[2024-05-17 15:56:49] 2024-05-17 22:56:30,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 15:56:49] 2024-05-17 22:56:33,386 | INFO     | monitor loop #370: job 0:6208106399 is in state 'finished'
[2024-05-17 15:56:49] 2024-05-17 22:56:33,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 15:56:49] 2024-05-17 22:56:33,497 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 15:56:49] 2024-05-17 22:56:33,497 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208106399/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 15:56:49] 2024-05-17 22:56:33,499 | INFO     | extracted standard info from prmon json
[2024-05-17 15:56:49] 2024-05-17 22:56:33,499 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 15:56:49] 2024-05-17 22:56:33,499 | WARNING  | GPU info not found in prmon json
[2024-05-17 15:56:49] 2024-05-17 22:56:33,500 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 15:56:49] 2024-05-17 22:56:33,500 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 15:56:49] 2024-05-17 22:56:33,503 | INFO     | fitting pss+swap vs Time
[2024-05-17 15:56:49] 2024-05-17 22:56:33,503 | INFO     | model: linear, x: [1715982220.0, 1715982281.0, 1715982342.0, 1715982403.0, 1715982464.0, 1715982525.0, 1715982586.0, 1715982647.0, 1715982708.0, 1715982769.0, 1715
[2024-05-17 15:56:49] 2024-05-17 22:56:33,504 | INFO     | sum of square deviations: 106336877.5
[2024-05-17 15:56:49] 2024-05-17 22:56:33,504 | INFO     | sum of deviations: 18958646218.999996
[2024-05-17 15:56:49] 2024-05-17 22:56:33,504 | INFO     | mean x: 1715984324.5
[2024-05-17 15:56:49] 2024-05-17 22:56:33,504 | INFO     | mean y: 2644982.3714285716
[2024-05-17 15:56:49] 2024-05-17 22:56:33,505 | INFO     | -- intersect: -305937688140.02246
[2024-05-17 15:56:49] 2024-05-17 22:56:33,505 | INFO     | intersect: -305937688140.02246
[2024-05-17 15:56:49] 2024-05-17 22:56:33,505 | INFO     | chi2: 2.3398432138353975
[2024-05-17 15:56:49] 2024-05-17 22:56:33,505 | INFO     | -- intersect: -305937688140.02246
[2024-05-17 15:56:49] 2024-05-17 22:56:33,505 | INFO     | current memory leak: 178.29 B/s (using 70 data points, chi2=2.34)
[2024-05-17 15:56:49] 2024-05-17 22:56:33,506 | INFO     | ..............................
[2024-05-17 15:56:49] 2024-05-17 22:56:33,506 | INFO     | . Timing measurements:
[2024-05-17 15:56:49] 2024-05-17 22:56:33,506 | INFO     | . get job = 0 s
[2024-05-17 15:56:49] 2024-05-17 22:56:33,506 | INFO     | . initial setup = 2 s
[2024-05-17 15:56:49] 2024-05-17 22:56:33,506 | INFO     | . payload setup = 4 s
[2024-05-17 15:56:49] 2024-05-17 22:56:33,506 | INFO     | . stage-in = 0 s
[2024-05-17 15:56:49] 2024-05-17 22:56:33,506 | INFO     | . payload execution = 4668 s
[2024-05-17 15:56:49] 2024-05-17 22:56:33,507 | INFO     | . stage-out = 0 s
[2024-05-17 15:56:49] 2024-05-17 22:56:33,507 | INFO     | . log creation = 0 s
[2024-05-17 15:56:49] 2024-05-17 22:56:33,507 | INFO     | ..............................
[2024-05-17 15:56:49] 2024-05-17 22:56:33,601 | INFO     | 
[2024-05-17 15:56:49] 2024-05-17 22:56:33,601 | INFO     | job summary report
[2024-05-17 15:56:49] 2024-05-17 22:56:33,601 | INFO     | --------------------------------------------------
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | PanDA job id: 6208106399
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | task id: 38776146
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | errors: (none)
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | pilot state: finished 
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | transexitcode: 0
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | exeerrorcode: 0
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | exeerrordiag: 
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | exitcode: 0
[2024-05-17 15:56:49] 2024-05-17 22:56:33,602 | INFO     | exitmsg: OK
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | cpuconsumptiontime: 43251 s
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | nevents: 400
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | neventsw: 0
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | pid: 165888
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | pgrp: 165888
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | corecount: 12
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | event service: False
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | sizes: {0: 2392166, 4: 2392372, 11: 2392400, 4676: 2418579, 4678: 2427533, 4680: 2427589, 4686: 2427887}
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | --------------------------------------------------
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | 
[2024-05-17 15:56:49] 2024-05-17 22:56:33,603 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 15:56:49] 2024-05-17 22:56:33,628 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,629 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,629 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,629 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 15:56:49] 2024-05-17 22:56:33,630 | INFO     | job 6208106399 has completed (purged errors)
[2024-05-17 15:56:49] 2024-05-17 22:56:33,631 | INFO     | overall cleanup function is called
[2024-05-17 15:56:49] 2024-05-17 22:56:34,637 | INFO     | --- collectZombieJob: --- 10, [165888]
[2024-05-17 15:56:49] 2024-05-17 22:56:34,637 | INFO     | zombie collector waiting for pid 165888
[2024-05-17 15:56:49] 2024-05-17 22:56:34,638 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 15:56:49] 2024-05-17 22:56:35,643 | INFO     | collected zombie processes
[2024-05-17 15:56:49] 2024-05-17 22:56:35,643 | INFO     | will now attempt to kill all subprocesses of pid=165888
[2024-05-17 15:56:49] 2024-05-17 22:56:35,815 | INFO     | process IDs to be killed: [165888] (in reverse order)
[2024-05-17 15:56:49] 2024-05-17 22:56:35,890 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 15:56:49] 2024-05-17 22:56:35,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 15:56:49] 2024-05-17 22:56:35,897 | INFO     | did not find any defunct processes belonging to 165888
[2024-05-17 15:56:49] 2024-05-17 22:56:35,903 | INFO     | did not find any defunct processes belonging to 165888
[2024-05-17 15:56:49] 2024-05-17 22:56:35,903 | INFO     | ready for new job
[2024-05-17 15:56:49] 2024-05-17 22:56:35,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 15:56:49] 2024-05-17 22:56:35,905 | INFO     | *************************************
[2024-05-17 15:56:49] 2024-05-17 22:56:35,905 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 15:56:49] 2024-05-17 22:56:35,905 | INFO     | *************************************
[2024-05-17 15:56:49] 2024-05-17 22:56:35,905 | INFO     | 
[2024-05-17 15:56:49] 2024-05-17 22:56:35,908 | INFO     | architecture information:
[2024-05-17 15:56:49] 2024-05-17 22:56:35,908 | INFO     | executing command: cat /etc/os-release
[2024-05-17 15:56:49] 2024-05-17 22:56:35,929 | INFO     | cat /etc/os-release:
[2024-05-17 15:56:49] NAME="CentOS Linux"
[2024-05-17 15:56:49] VERSION="7 (Core)"
[2024-05-17 15:56:49] ID="centos"
[2024-05-17 15:56:49] ID_LIKE="rhel fedora"
[2024-05-17 15:56:49] VERSION_ID="7"
[2024-05-17 15:56:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 15:56:49] ANSI_COLOR="0;31"
[2024-05-17 15:56:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 15:56:49] HOME_URL="https://www.centos.org/"
[2024-05-17 15:56:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 15:56:49] 
[2024-05-17 15:56:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 15:56:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 15:56:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 15:56:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 15:56:49] 
[2024-05-17 15:56:49] 2024-05-17 22:56:35,930 | INFO     | *************************************
[2024-05-17 15:56:49] 2024-05-17 22:56:36,433 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 15:56:49] 2024-05-17 22:56:36,458 | INFO     | sufficient remaining disk space (2163542589440 B)
[2024-05-17 15:56:49] 2024-05-17 22:56:36,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 15:56:49] 2024-05-17 22:56:36,458 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 15:56:49] 2024-05-17 22:56:36,459 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 15:56:49] 2024-05-17 22:56:36,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 15:56:49] 2024-05-17 22:56:36,460 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 15:56:49] 2024-05-17 22:56:36,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 15:56:49] 2024-05-17 22:56:36,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 15:56:49] 2024-05-17 22:56:36,893 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 15:56:49] 2024-05-17 22:56:36,894 | INFO     | aborting loop
[2024-05-17 15:56:49] 2024-05-17 22:56:37,003 | INFO     | all payload control threads have been joined
[2024-05-17 15:56:49] 2024-05-17 22:56:37,187 | INFO     | all job control threads have been joined
[2024-05-17 15:56:49] 2024-05-17 22:56:37,464 | INFO     | [job] retrieve thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:37,476 | INFO     | all data control threads have been joined
[2024-05-17 15:56:49] 2024-05-17 22:56:37,489 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:37,490 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:37,546 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:37,749 | INFO     | [data] copytool_in thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:37,897 | INFO     | [job] job monitor thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:38,008 | INFO     | [payload] control thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:38,190 | INFO     | [job] control thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:38,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 15:56:49] 2024-05-17 22:56:38,361 | INFO     | [payload] failed_post thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:38,412 | INFO     | [job] validate thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:38,463 | INFO     | [data] copytool_out thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:38,482 | INFO     | [data] control thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:38,485 | INFO     | [payload] validate_post thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:38,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 15:56:49] 2024-05-17 22:56:38,895 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:39,618 | INFO     | [job] queue monitor thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:42,204 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 15:56:49] 2024-05-17 22:56:43,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629547562816)>', '<ExcThread(monitor, started 139629334841088)>']
[2024-05-17 15:56:49] 2024-05-17 22:56:44,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 15:56:49] 2024-05-17 22:56:44,494 | INFO     | [monitor] control thread has ended
[2024-05-17 15:56:49] 2024-05-17 22:56:48,779 | INFO     | all workflow threads have been joined
[2024-05-17 15:56:49] 2024-05-17 22:56:48,779 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 15:56:49] 2024-05-17 22:56:48,779 | INFO     | traces error code: 0
[2024-05-17 15:56:49] 2024-05-17 22:56:48,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 15:56:49] 2024-05-17 22:56:48,869 [wrapper] ==== pilot stdout END ====
[2024-05-17 15:56:49] 2024-05-17 22:56:48,874 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 15:56:49] 2024-05-17 22:56:48,877 [wrapper] pilotpid: 159385
[2024-05-17 15:56:49] 2024-05-17 22:56:48,881 [wrapper] Pilot exit status: 0
[2024-05-17 15:56:49] 2024-05-17 22:56:48,892 [wrapper] pandaids: 6208106399
[2024-05-17 15:56:49] 2024-05-17 22:56:48,984 [wrapper] cleanup: SIGTERM to supervisor_pilot 134029 159386
[2024-05-17 15:56:49] 2024-05-17 22:56:48,988 [wrapper] Test setup, not cleaning
[2024-05-17 15:56:49] 2024-05-17 22:56:48,992 [wrapper] ==== wrapper stdout END ====
[2024-05-17 15:56:49] 2024-05-17 22:56:48,996 [wrapper] ==== wrapper stderr END ====
[2024-05-17 15:56:49] 2024-05-17 22:56:49,003 [wrapper] apfmon messages muted
[2024-05-17 15:56:49]  *** Error codes and diagnostics ***
[2024-05-17 15:56:49]     "exeErrorCode": 0,
[2024-05-17 15:56:49]     "exeErrorDiag": "",
[2024-05-17 15:56:49]     "pilotErrorCode": 0,
[2024-05-17 15:56:49]     "pilotErrorDiag": "",
[2024-05-17 15:56:49]  *** Listing of results directory ***
[2024-05-17 15:56:49] total 872376
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc    467845 May 17 06:56 pilot3.tar.gz
[2024-05-17 15:56:49] -rwx------ 1 boinc boinc     32251 May 17 07:05 runpilot2-wrapper.sh
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc      5633 May 17 07:05 queuedata.json
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc       100 May 17 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 15:56:49] -rwxr-xr-x 1 boinc boinc      7986 May 17 14:37 run_atlas
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc       105 May 17 14:37 job.xml
[2024-05-17 15:56:49] -rw-r--r-- 2 boinc boinc 610026992 May 17 14:38 EVNT.38776140._000272.pool.root.1
[2024-05-17 15:56:49] -rw-r--r-- 2 boinc boinc     17537 May 17 14:38 start_atlas.sh
[2024-05-17 15:56:49] drwxrwx--x 2 boinc boinc      4096 May 17 14:38 shared
[2024-05-17 15:56:49] -rw-r--r-- 2 boinc boinc    479997 May 17 14:38 input.tar.gz
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc      6627 May 17 14:38 init_data.xml
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc         0 May 17 14:38 boinc_lockfile
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc      2611 May 17 14:38 pandaJob.out
[2024-05-17 15:56:49] -rw------- 1 boinc boinc       424 May 17 14:38 setup.sh.local
[2024-05-17 15:56:49] -rw------- 1 boinc boinc   1019089 May 17 14:38 agis_schedconf.cvmfs.json
[2024-05-17 15:56:49] -rw------- 1 boinc boinc         0 May 17 14:38 agis_ddmendpoints.agis.ALL.json
[2024-05-17 15:56:49] -rw------- 1 boinc boinc   1324701 May 17 14:38 cric_ddmendpoints.json
[2024-05-17 15:56:49] drwx------ 4 boinc boinc      4096 May 17 14:38 pilot3
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc       530 May 17 15:55 boinc_task_state.xml
[2024-05-17 15:56:49] -rw------- 1 boinc boinc 278125210 May 17 15:55 HITS.38776146._015357.pool.root.1
[2024-05-17 15:56:49] -rw------- 1 boinc boinc      1056 May 17 15:56 memory_monitor_summary.json
[2024-05-17 15:56:49] -rw------- 1 boinc boinc        95 May 17 15:56 pilot_heartbeat.json
[2024-05-17 15:56:49] -rw------- 1 boinc boinc    349142 May 17 15:56 log.38776146._015357.job.log.tgz.1
[2024-05-17 15:56:49] -rw------- 1 boinc boinc      7768 May 17 15:56 heartbeat.json
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc      8192 May 17 15:56 boinc_mmap_file
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc        27 May 17 15:56 wrapper_checkpoint.txt
[2024-05-17 15:56:49] -rw------- 1 boinc boinc      4333 May 17 15:56 pilotlog.txt
[2024-05-17 15:56:49] -rw------- 1 boinc boinc    465387 May 17 15:56 log.38776146._015357.job.log.1
[2024-05-17 15:56:49] -rw------- 1 boinc boinc       357 May 17 15:56 output.list
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc       620 May 17 15:56 runtime_log
[2024-05-17 15:56:49] -rw------- 1 boinc boinc    829440 May 17 15:56 result.tar.gz
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc     11286 May 17 15:56 runtime_log.err
[2024-05-17 15:56:49] -rw------- 1 boinc boinc       654 May 17 15:56 9pVLDmWODS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmf8QKDmEsawTn.diag
[2024-05-17 15:56:49] -rw-r--r-- 1 boinc boinc     21816 May 17 15:56 stderr.txt
[2024-05-17 15:56:49] HITS file was successfully produced:
[2024-05-17 15:56:49] -rw------- 1 boinc boinc 278125210 May 17 15:55 shared/HITS.pool.root.1
[2024-05-17 15:56:49]  *** Contents of shared directory: ***
[2024-05-17 15:56:49] total 868652
[2024-05-17 15:56:49] -rw-r--r-- 2 boinc boinc 610026992 May 17 14:38 ATLAS.root_0
[2024-05-17 15:56:49] -rw-r--r-- 2 boinc boinc     17537 May 17 14:38 start_atlas.sh
[2024-05-17 15:56:49] -rw-r--r-- 2 boinc boinc    479997 May 17 14:38 input.tar.gz
[2024-05-17 15:56:49] -rw------- 1 boinc boinc 278125210 May 17 15:55 HITS.pool.root.1
[2024-05-17 15:56:49] -rw------- 1 boinc boinc    829440 May 17 15:56 result.tar.gz
15:56:51 (155211): run_atlas exited; CPU time 42875.917062
15:56:51 (155211): called boinc_finish(0)

</stderr_txt>
]]>

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