Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:52:01 (298474): wrapper (7.7.26015): starting
13:52:01 (298474): wrapper: running run_atlas (--nthreads 8)
[2024-05-17 13:52:01] Arguments: --nthreads 8
[2024-05-17 13:52:01] Threads: 8
[2024-05-17 13:52:01] Checking for CVMFS
[2024-05-17 13:52:02] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 13:52:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 13:52:02] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 13:52:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 13:52:03] 2.11.2.0 134330 1974 98676 132849 3 114 15888946 18432000 21221 130560 0 6866272 98.432 22178294 40622 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-17 13:52:03] CVMFS is ok
[2024-05-17 13:52:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 13:52:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 13:52:03] Further information can be found at the LHC@home message board.
[2024-05-17 13:52:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 13:52:03] Checking for apptainer binary...
[2024-05-17 13:52:03] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 13:52:03] Running /usr/bin/apptainer --version
[2024-05-17 13:52:03] apptainer version 1.3.0-1.el7
[2024-05-17 13:52:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 13:52:38] c6-12-27-3.aglt2.org
[2024-05-17 13:52:38] apptainer works
[2024-05-17 13:52:38] Set ATHENA_PROC_NUMBER=8
[2024-05-17 13:52:38] Set ATHENA_CORE_NUMBER=8
[2024-05-17 13:52:39] Starting ATLAS job with PandaID=6208106341
[2024-05-17 13:52:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 22:18:21]  *** The last 200 lines of the pilot log: ***
[2024-05-17 22:18:21] 2024-05-18 02:17:44,841 | INFO     | monitor loop #2018: job 0:6208106341 is in state 'finished'
[2024-05-17 22:18:21] 2024-05-18 02:17:44,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 22:18:21] 2024-05-18 02:17:47,346 | INFO     | monitor loop #2019: job 0:6208106341 is in state 'finished'
[2024-05-17 22:18:21] 2024-05-18 02:17:47,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 22:18:21] 2024-05-18 02:17:49,854 | INFO     | monitor loop #2020: job 0:6208106341 is in state 'finished'
[2024-05-17 22:18:21] 2024-05-18 02:17:49,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 22:18:21] 2024-05-18 02:17:52,372 | INFO     | monitor loop #2021: job 0:6208106341 is in state 'finished'
[2024-05-17 22:18:21] 2024-05-18 02:17:52,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 22:18:21] 2024-05-18 02:17:54,877 | INFO     | monitor loop #2022: job 0:6208106341 is in state 'finished'
[2024-05-17 22:18:21] 2024-05-18 02:17:54,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 22:18:21] 2024-05-18 02:17:57,382 | INFO     | monitor loop #2023: job 0:6208106341 is in state 'finished'
[2024-05-17 22:18:21] 2024-05-18 02:17:57,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 22:18:21] 2024-05-18 02:17:59,898 | INFO     | monitor loop #2024: job 0:6208106341 is in state 'finished'
[2024-05-17 22:18:21] 2024-05-18 02:17:59,898 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 22:18:21] 2024-05-18 02:18:00,781 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 22:18:21] 2024-05-18 02:18:00,782 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6208106341/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 22:18:21] 2024-05-18 02:18:00,782 | INFO     | extracted standard info from prmon json
[2024-05-17 22:18:21] 2024-05-18 02:18:00,783 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 22:18:21] 2024-05-18 02:18:00,783 | WARNING  | GPU info not found in prmon json
[2024-05-17 22:18:21] 2024-05-18 02:18:00,785 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 22:18:21] 2024-05-18 02:18:00,785 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 22:18:21] 2024-05-18 02:18:00,804 | INFO     | fitting pss+swap vs Time
[2024-05-17 22:18:21] 2024-05-18 02:18:00,805 | INFO     | model: linear, x: [1715968822.0, 1715968883.0, 1715968944.0, 1715969005.0, 1715969066.0, 1715969127.0, 1715969188.0, 1715969249.0, 1715969310.0, 1715969371.0, 1715
[2024-05-17 22:18:21] 2024-05-18 02:18:00,805 | INFO     | sum of square deviations: 36258009802.80154
[2024-05-17 22:18:21] 2024-05-18 02:18:00,825 | INFO     | sum of deviations: 1118321060238.6755
[2024-05-17 22:18:21] 2024-05-18 02:18:00,825 | INFO     | mean x: 1715983706.1513293
[2024-05-17 22:18:21] 2024-05-18 02:18:00,825 | INFO     | mean y: 2360438.4233128834
[2024-05-17 22:18:21] 2024-05-18 02:18:00,826 | INFO     | -- intersect: -52924447404.934105
[2024-05-17 22:18:21] 2024-05-18 02:18:00,826 | INFO     | intersect: -52924447404.934105
[2024-05-17 22:18:21] 2024-05-18 02:18:00,830 | INFO     | chi2: 23.879745783198125
[2024-05-17 22:18:21] 2024-05-18 02:18:00,830 | INFO     | model: linear, x: [1715968822.0, 1715968883.0, 1715968944.0, 1715969005.0, 1715969066.0, 1715969127.0, 1715969188.0, 1715969249.0, 1715969310.0, 1715969371.0, 1715
[2024-05-17 22:18:21] 2024-05-18 02:18:00,831 | INFO     | sum of square deviations: 35157155917.68608
[2024-05-17 22:18:21] 2024-05-18 02:18:00,843 | INFO     | sum of deviations: 1172808122635.9177
[2024-05-17 22:18:21] 2024-05-18 02:18:00,843 | INFO     | mean x: 1715983553.6528926
[2024-05-17 22:18:21] 2024-05-18 02:18:00,843 | INFO     | mean y: 2367927.737603306
[2024-05-17 22:18:21] 2024-05-18 02:18:00,843 | INFO     | -- intersect: -57241154692.399765
[2024-05-17 22:18:21] 2024-05-18 02:18:00,843 | INFO     | intersect: -57241154692.399765
[2024-05-17 22:18:21] 2024-05-18 02:18:00,844 | INFO     | chi2: 22.300501071515036
[2024-05-17 22:18:21] 2024-05-18 02:18:00,847 | INFO     | current chi2=22.300501071515036 (change=6.6133229642429905 %)
[2024-05-17 22:18:21] 2024-05-18 02:18:00,847 | INFO     | right removable region: 483
[2024-05-17 22:18:21] 2024-05-18 02:18:00,848 | INFO     | model: linear, x: [1715969127.0, 1715969188.0, 1715969249.0, 1715969310.0, 1715969371.0, 1715969432.0, 1715969493.0, 1715969554.0, 1715969615.0, 1715969676.0, 1715
[2024-05-17 22:18:21] 2024-05-18 02:18:00,848 | INFO     | sum of square deviations: 35157110777.68609
[2024-05-17 22:18:21] 2024-05-18 02:18:00,860 | INFO     | sum of deviations: 952438938780.4381
[2024-05-17 22:18:21] 2024-05-18 02:18:00,860 | INFO     | mean x: 1715983858.6528926
[2024-05-17 22:18:21] 2024-05-18 02:18:00,860 | INFO     | mean y: 2383410.115702479
[2024-05-17 22:18:21] 2024-05-18 02:18:00,861 | INFO     | -- intersect: -46485220637.741455
[2024-05-17 22:18:21] 2024-05-18 02:18:00,861 | INFO     | intersect: -46485220637.741455
[2024-05-17 22:18:21] 2024-05-18 02:18:00,861 | INFO     | chi2: 18.72814929885617
[2024-05-17 22:18:21] 2024-05-18 02:18:00,862 | INFO     | current chi2=18.72814929885617 (change=21.573079257680526 %)
[2024-05-17 22:18:21] 2024-05-18 02:18:00,862 | INFO     | left removable region: 10
[2024-05-17 22:18:21] 2024-05-18 02:18:00,865 | INFO     | model: linear, x: [1715969432.0, 1715969493.0, 1715969554.0, 1715969615.0, 1715969676.0, 1715969737.0, 1715969798.0, 1715969859.0, 1715969920.0, 1715969981.0, 1715
[2024-05-17 22:18:21] 2024-05-18 02:18:00,866 | INFO     | sum of square deviations: 32814102058.42275
[2024-05-17 22:18:21] 2024-05-18 02:18:00,876 | INFO     | sum of deviations: 867705697953.6292
[2024-05-17 22:18:21] 2024-05-18 02:18:00,876 | INFO     | mean x: 1715983828.1564481
[2024-05-17 22:18:21] 2024-05-18 02:18:00,877 | INFO     | mean y: 2410856.6131078224
[2024-05-17 22:18:21] 2024-05-18 02:18:00,877 | INFO     | -- intersect: -45373474871.926636
[2024-05-17 22:18:21] 2024-05-18 02:18:00,877 | INFO     | intersect: -45373474871.926636
[2024-05-17 22:18:21] 2024-05-18 02:18:00,877 | INFO     | chi2: 13.752459899759797
[2024-05-17 22:18:21] 2024-05-18 02:18:00,877 | INFO     | -- intersect: -45373474871.926636
[2024-05-17 22:18:21] 2024-05-18 02:18:00,878 | INFO     | current memory leak: 26.44 B/s (using 473 data points, chi2=13.75)
[2024-05-17 22:18:21] 2024-05-18 02:18:00,878 | INFO     | ..............................
[2024-05-17 22:18:21] 2024-05-18 02:18:00,878 | INFO     | . Timing measurements:
[2024-05-17 22:18:21] 2024-05-18 02:18:00,878 | INFO     | . get job = 0 s
[2024-05-17 22:18:21] 2024-05-18 02:18:00,879 | INFO     | . initial setup = 5 s
[2024-05-17 22:18:21] 2024-05-18 02:18:00,879 | INFO     | . payload setup = 95 s
[2024-05-17 22:18:21] 2024-05-18 02:18:00,879 | INFO     | . stage-in = 0 s
[2024-05-17 22:18:21] 2024-05-18 02:18:00,879 | INFO     | . payload execution = 29887 s
[2024-05-17 22:18:21] 2024-05-18 02:18:00,879 | INFO     | . stage-out = 5 s
[2024-05-17 22:18:21] 2024-05-18 02:18:00,882 | INFO     | . log creation = 1 s
[2024-05-17 22:18:21] 2024-05-18 02:18:00,882 | INFO     | ..............................
[2024-05-17 22:18:21] 2024-05-18 02:18:01,018 | INFO     | 
[2024-05-17 22:18:21] 2024-05-18 02:18:01,018 | INFO     | job summary report
[2024-05-17 22:18:21] 2024-05-18 02:18:01,018 | INFO     | --------------------------------------------------
[2024-05-17 22:18:21] 2024-05-18 02:18:01,018 | INFO     | PanDA job id: 6208106341
[2024-05-17 22:18:21] 2024-05-18 02:18:01,018 | INFO     | task id: 38776146
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | errors: (none)
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | pilot state: finished 
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | transexitcode: 0
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | exeerrorcode: 0
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | exeerrordiag: 
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | exitcode: 0
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | exitmsg: OK
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | cpuconsumptiontime: 73678 s
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | nevents: 400
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | neventsw: 0
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | pid: 47816
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | pgrp: 47816
[2024-05-17 22:18:21] 2024-05-18 02:18:01,019 | INFO     | corecount: 8
[2024-05-17 22:18:21] 2024-05-18 02:18:01,020 | INFO     | event service: False
[2024-05-17 22:18:21] 2024-05-18 02:18:01,020 | INFO     | sizes: {0: 2390718, 1: 2392083, 2: 2392282, 13: 2392282, 24: 2392338, 34: 2392366, 45: 2392522, 55: 2392756, 56: 2392784, 29987: 2425433, 29993: 2434393, 29994: 24
[2024-05-17 22:18:21] 2024-05-18 02:18:01,020 | INFO     | --------------------------------------------------
[2024-05-17 22:18:21] 2024-05-18 02:18:01,020 | INFO     | 
[2024-05-17 22:18:21] 2024-05-18 02:18:01,020 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2024-05-17 22:18:21] 2024-05-18 02:18:01,320 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,320 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,320 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,320 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 22:18:21] 2024-05-18 02:18:01,321 | INFO     | job 6208106341 has completed (purged errors)
[2024-05-17 22:18:21] 2024-05-18 02:18:01,322 | INFO     | overall cleanup function is called
[2024-05-17 22:18:21] 2024-05-18 02:18:02,329 | INFO     | --- collectZombieJob: --- 10, [47816]
[2024-05-17 22:18:21] 2024-05-18 02:18:02,329 | INFO     | zombie collector waiting for pid 47816
[2024-05-17 22:18:21] 2024-05-18 02:18:02,329 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 22:18:21] 2024-05-18 02:18:03,335 | INFO     | collected zombie processes
[2024-05-17 22:18:21] 2024-05-18 02:18:03,335 | INFO     | will now attempt to kill all subprocesses of pid=47816
[2024-05-17 22:18:21] 2024-05-18 02:18:03,578 | INFO     | process IDs to be killed: [47816] (in reverse order)
[2024-05-17 22:18:21] 2024-05-18 02:18:05,225 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 22:18:21] 2024-05-18 02:18:05,225 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 22:18:21] 2024-05-18 02:18:05,313 | INFO     | did not find any defunct processes belonging to 47816
[2024-05-17 22:18:21] 2024-05-18 02:18:05,370 | INFO     | did not find any defunct processes belonging to 47816
[2024-05-17 22:18:21] 2024-05-18 02:18:05,371 | INFO     | ready for new job
[2024-05-17 22:18:21] 2024-05-18 02:18:05,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 22:18:21] 2024-05-18 02:18:05,387 | INFO     | *************************************
[2024-05-17 22:18:21] 2024-05-18 02:18:05,388 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 22:18:21] 2024-05-18 02:18:05,388 | INFO     | *************************************
[2024-05-17 22:18:21] 2024-05-18 02:18:05,388 | INFO     | 
[2024-05-17 22:18:21] 2024-05-18 02:18:05,412 | INFO     | architecture information:
[2024-05-17 22:18:21] 2024-05-18 02:18:05,425 | INFO     | executing command: cat /etc/os-release
[2024-05-17 22:18:21] 2024-05-18 02:18:05,606 | INFO     | cat /etc/os-release:
[2024-05-17 22:18:21] NAME="CentOS Linux"
[2024-05-17 22:18:21] VERSION="7 (Core)"
[2024-05-17 22:18:21] ID="centos"
[2024-05-17 22:18:21] ID_LIKE="rhel fedora"
[2024-05-17 22:18:21] VERSION_ID="7"
[2024-05-17 22:18:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 22:18:21] ANSI_COLOR="0;31"
[2024-05-17 22:18:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 22:18:21] HOME_URL="https://www.centos.org/"
[2024-05-17 22:18:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 22:18:21] 
[2024-05-17 22:18:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 22:18:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 22:18:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 22:18:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 22:18:21] 
[2024-05-17 22:18:21] 2024-05-18 02:18:05,606 | INFO     | *************************************
[2024-05-17 22:18:21] 2024-05-18 02:18:06,125 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2024-05-17 22:18:21] 2024-05-18 02:18:06,320 | INFO     | sufficient remaining disk space (98779004928 B)
[2024-05-17 22:18:21] 2024-05-18 02:18:06,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 22:18:21] 2024-05-18 02:18:06,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 22:18:21] 2024-05-18 02:18:06,321 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 22:18:21] 2024-05-18 02:18:06,322 | INFO     | aborting loop
[2024-05-17 22:18:21] 2024-05-18 02:18:06,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 22:18:21] 2024-05-18 02:18:06,465 | INFO     | all job control threads have been joined
[2024-05-17 22:18:21] 2024-05-18 02:18:06,571 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 22:18:21] 2024-05-18 02:18:06,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 22:18:21] 2024-05-18 02:18:06,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 22:18:21] 2024-05-18 02:18:06,623 | INFO     | all payload control threads have been joined
[2024-05-17 22:18:21] 2024-05-18 02:18:06,890 | INFO     | all data control threads have been joined
[2024-05-17 22:18:21] 2024-05-18 02:18:07,326 | INFO     | [job] retrieve thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,327 | INFO     | [job] job monitor thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,327 | INFO     | [job] queue monitor thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 22:18:21] 2024-05-18 02:18:07,471 | INFO     | [job] control thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,561 | INFO     | [payload] failed_post thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,566 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,575 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,629 | INFO     | [payload] control thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,896 | INFO     | [data] control thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,960 | INFO     | [data] copytool_in thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:07,973 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:08,067 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:08,140 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 22:18:21] 2024-05-18 02:18:08,165 | INFO     | [payload] validate_post thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:08,565 | INFO     | [job] validate thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:09,429 | INFO     | [data] copytool_out thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:12,149 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 22:18:21] 2024-05-18 02:18:13,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750650439488)>', '<ExcThread(monitor, started 139750216283904)>']
[2024-05-17 22:18:21] 2024-05-18 02:18:13,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 22:18:21] 2024-05-18 02:18:13,613 | INFO     | [monitor] control thread has ended
[2024-05-17 22:18:21] 2024-05-18 02:18:18,284 | INFO     | all workflow threads have been joined
[2024-05-17 22:18:21] 2024-05-18 02:18:18,284 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 22:18:21] 2024-05-18 02:18:18,284 | INFO     | traces error code: 0
[2024-05-17 22:18:21] 2024-05-18 02:18:18,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 22:18:21] 2024-05-18 02:18:18,638 [wrapper] ==== pilot stdout END ====
[2024-05-17 22:18:21] 2024-05-18 02:18:18,708 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 22:18:21] 2024-05-18 02:18:18,749 [wrapper] pilotpid: 5184
[2024-05-17 22:18:21] 2024-05-18 02:18:18,857 [wrapper] Pilot exit status: 0
[2024-05-17 22:18:21] 2024-05-18 02:18:19,216 [wrapper] pandaids: 6208106341
[2024-05-17 22:18:21] 2024-05-18 02:18:19,682 [wrapper] cleanup: SIGTERM to supervisor_pilot 159354 5185
[2024-05-17 22:18:21] 2024-05-18 02:18:19,740 [wrapper] Test setup, not cleaning
[2024-05-17 22:18:21] 2024-05-18 02:18:19,784 [wrapper] ==== wrapper stdout END ====
[2024-05-17 22:18:21] 2024-05-18 02:18:19,831 [wrapper] ==== wrapper stderr END ====
[2024-05-17 22:18:21] 2024-05-18 02:18:19,900 [wrapper] apfmon messages muted
[2024-05-17 22:18:21]  *** Error codes and diagnostics ***
[2024-05-17 22:18:21]     "exeErrorCode": 0,
[2024-05-17 22:18:21]     "exeErrorDiag": "",
[2024-05-17 22:18:21]     "pilotErrorCode": 0,
[2024-05-17 22:18:21]     "pilotErrorDiag": "",
[2024-05-17 22:18:21]  *** Listing of results directory ***
[2024-05-17 22:18:21] total 870664
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas    467845 May 17 09:56 pilot3.tar.gz
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas      5633 May 17 10:02 queuedata.json
[2024-05-17 22:18:21] -rwx------ 1 boincer umatlas     32251 May 17 10:03 runpilot2-wrapper.sh
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas       100 May 17 13:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 22:18:21] -rwxr-xr-x 1 boincer umatlas      7986 May 17 13:51 run_atlas
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas       105 May 17 13:51 job.xml
[2024-05-17 22:18:21] -rw-r--r-- 2 boincer umatlas 604905122 May 17 13:52 EVNT.38776140._000268.pool.root.1
[2024-05-17 22:18:21] -rw-r--r-- 2 boincer umatlas     17537 May 17 13:52 start_atlas.sh
[2024-05-17 22:18:21] drwxrwx--x 2 boincer umatlas      4096 May 17 13:52 shared
[2024-05-17 22:18:21] -rw-r--r-- 2 boincer umatlas    480004 May 17 13:52 input.tar.gz
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas         0 May 17 13:52 boinc_lockfile
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas      2615 May 17 13:52 pandaJob.out
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas       467 May 17 13:53 setup.sh.local
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas   1019099 May 17 13:55 agis_schedconf.cvmfs.json
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas   1324701 May 17 13:55 cric_ddmendpoints.json
[2024-05-17 22:18:21] drwx------ 4 boincer umatlas      4096 May 17 13:55 pilot3
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas      6385 May 17 22:12 init_data.xml
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas 276274498 May 17 22:14 HITS.38776146._015308.pool.root.1
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas       532 May 17 22:15 boinc_task_state.xml
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas      1066 May 17 22:16 memory_monitor_summary.json
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas         0 May 17 22:17 agis_ddmendpoints.agis.ALL.json
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas    559198 May 17 22:17 log.38776146._015308.job.log.tgz.1
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas        95 May 17 22:17 pilot_heartbeat.json
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas      6147 May 17 22:18 heartbeat.json
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas      8192 May 17 22:18 boinc_mmap_file
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas        28 May 17 22:18 wrapper_checkpoint.txt
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas      4211 May 17 22:18 pilotlog.txt
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas   2867773 May 17 22:18 log.38776146._015308.job.log.1
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas       357 May 17 22:18 output.list
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas       620 May 17 22:18 runtime_log
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas   3440640 May 17 22:18 result.tar.gz
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas     11415 May 17 22:18 runtime_log.err
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas       654 May 17 22:18 iCtKDmFMDS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmA8QKDm1Xrmpm.diag
[2024-05-17 22:18:21] -rw-r--r-- 1 boincer umatlas     21933 May 17 22:18 stderr.txt
[2024-05-17 22:18:21] HITS file was successfully produced:
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas 276274498 May 17 22:14 shared/HITS.pool.root.1
[2024-05-17 22:18:21]  *** Contents of shared directory: ***
[2024-05-17 22:18:21] total 864388
[2024-05-17 22:18:21] -rw-r--r-- 2 boincer umatlas 604905122 May 17 13:52 ATLAS.root_0
[2024-05-17 22:18:21] -rw-r--r-- 2 boincer umatlas     17537 May 17 13:52 start_atlas.sh
[2024-05-17 22:18:21] -rw-r--r-- 2 boincer umatlas    480004 May 17 13:52 input.tar.gz
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas 276274498 May 17 22:14 HITS.pool.root.1
[2024-05-17 22:18:21] -rw------- 1 boincer umatlas   3440640 May 17 22:18 result.tar.gz
22:18:23 (298474): run_atlas exited; CPU time 73163.138224
22:18:23 (298474): called boinc_finish(0)

</stderr_txt>
]]>

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