Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:03:59 (3427407): wrapper (7.7.26015): starting
22:03:59 (3427407): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 22:03:59] Arguments: --nthreads 4
[2024-05-23 22:03:59] Threads: 4
[2024-05-23 22:03:59] Checking for CVMFS
[2024-05-23 22:03:59] No cvmfs_config command found, will try listing directly
[2024-05-23 22:03:59] CVMFS is ok
[2024-05-23 22:03:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 22:03:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 22:03:59] Further information can be found at the LHC@home message board.
[2024-05-23 22:03:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 22:03:59] Checking for apptainer binary...
[2024-05-23 22:03:59] which: no apptainer in ((null))
[2024-05-23 22:03:59] apptainer is not installed, using version from CVMFS
[2024-05-23 22:03:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 22:04:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-05-23 22:04:00] apptainer works
[2024-05-23 22:04:00] Set ATHENA_PROC_NUMBER=4
[2024-05-23 22:04:00] Set ATHENA_CORE_NUMBER=4
[2024-05-23 22:04:00] Starting ATLAS job with PandaID=6208106372
[2024-05-23 22:04:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-24 03:07:07]  *** The last 200 lines of the pilot log: ***
[2024-05-24 03:07:07] 2024-05-24 01:06:54,460 | INFO     | fitting pss+swap vs Time
[2024-05-24 03:07:07] 2024-05-24 01:06:54,461 | INFO     | model: linear, x: [1716494679.0, 1716494740.0, 1716494801.0, 1716494862.0, 1716494923.0, 1716494984.0, 1716495045.0, 1716495106.0, 1716495167.0, 1716495228.0, 1716
[2024-05-24 03:07:07] 2024-05-24 01:06:54,461 | INFO     | sum of square deviations: 8205826414.5
[2024-05-24 03:07:07] 2024-05-24 01:06:54,462 | INFO     | sum of deviations: 104214496753.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,462 | INFO     | mean x: 1716503737.5
[2024-05-24 03:07:07] 2024-05-24 01:06:54,462 | INFO     | mean y: 2300754.9194630873
[2024-05-24 03:07:07] 2024-05-24 01:06:54,462 | INFO     | -- intersect: -21797401571.480038
[2024-05-24 03:07:07] 2024-05-24 01:06:54,462 | INFO     | intersect: -21797401571.480038
[2024-05-24 03:07:07] 2024-05-24 01:06:54,463 | INFO     | chi2: 4.018282994573424
[2024-05-24 03:07:07] 2024-05-24 01:06:54,463 | INFO     | model: linear, x: [1716494679.0, 1716494740.0, 1716494801.0, 1716494862.0, 1716494923.0, 1716494984.0, 1716495045.0, 1716495106.0, 1716495167.0, 1716495228.0, 1716
[2024-05-24 03:07:07] 2024-05-24 01:06:54,463 | INFO     | sum of square deviations: 7799669962.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,465 | INFO     | sum of deviations: 121230208853.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,465 | INFO     | mean x: 1716503585.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,465 | INFO     | mean y: 2307047.068259386
[2024-05-24 03:07:07] 2024-05-24 01:06:54,465 | INFO     | -- intersect: -26677294669.45284
[2024-05-24 03:07:07] 2024-05-24 01:06:54,465 | INFO     | intersect: -26677294669.45284
[2024-05-24 03:07:07] 2024-05-24 01:06:54,465 | INFO     | chi2: 3.2200624859468685
[2024-05-24 03:07:07] 2024-05-24 01:06:54,465 | INFO     | current chi2=3.2200624859468685 (change=19.864716091537833 %)
[2024-05-24 03:07:07] 2024-05-24 01:06:54,465 | INFO     | right removable region: 292
[2024-05-24 03:07:07] 2024-05-24 01:06:54,466 | INFO     | model: linear, x: [1716494984.0, 1716495045.0, 1716495106.0, 1716495167.0, 1716495228.0, 1716495289.0, 1716495350.0, 1716495411.0, 1716495472.0, 1716495533.0, 1716
[2024-05-24 03:07:07] 2024-05-24 01:06:54,466 | INFO     | sum of square deviations: 7799669962.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,467 | INFO     | sum of deviations: 40381165825.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,467 | INFO     | mean x: 1716503890.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,467 | INFO     | mean y: 2324662.1740614334
[2024-05-24 03:07:07] 2024-05-24 01:06:54,467 | INFO     | -- intersect: -8884516519.446127
[2024-05-24 03:07:07] 2024-05-24 01:06:54,467 | INFO     | intersect: -8884516519.446127
[2024-05-24 03:07:07] 2024-05-24 01:06:54,468 | INFO     | chi2: 1.9117352233710303
[2024-05-24 03:07:07] 2024-05-24 01:06:54,468 | INFO     | current chi2=1.9117352233710303 (change=52.42407700122729 %)
[2024-05-24 03:07:07] 2024-05-24 01:06:54,468 | INFO     | model: linear, x: [1716495289.0, 1716495350.0, 1716495411.0, 1716495472.0, 1716495533.0, 1716495594.0, 1716495655.0, 1716495716.0, 1716495777.0, 1716495838.0, 1716
[2024-05-24 03:07:07] 2024-05-24 01:06:54,468 | INFO     | sum of square deviations: 7407141672.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,470 | INFO     | sum of deviations: -7045586254.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,470 | INFO     | mean x: 1716504042.5
[2024-05-24 03:07:07] 2024-05-24 01:06:54,470 | INFO     | mean y: 2343087.8958333335
[2024-05-24 03:07:07] 2024-05-24 01:06:54,470 | INFO     | -- intersect: 1635061594.2111032
[2024-05-24 03:07:07] 2024-05-24 01:06:54,470 | INFO     | intersect: 1635061594.2111032
[2024-05-24 03:07:07] 2024-05-24 01:06:54,470 | INFO     | chi2: 0.8717710050748959
[2024-05-24 03:07:07] 2024-05-24 01:06:54,470 | INFO     | current chi2=0.8717710050748959 (change=54.398967261916575 %)
[2024-05-24 03:07:07] 2024-05-24 01:06:54,470 | INFO     | model: linear, x: [1716495594.0, 1716495655.0, 1716495716.0, 1716495777.0, 1716495838.0, 1716495899.0, 1716495960.0, 1716496021.0, 1716496082.0, 1716496143.0, 1716
[2024-05-24 03:07:07] 2024-05-24 01:06:54,471 | INFO     | sum of square deviations: 7028008982.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,472 | INFO     | sum of deviations: -15663889574.999998
[2024-05-24 03:07:07] 2024-05-24 01:06:54,472 | INFO     | mean x: 1716504195.0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,472 | INFO     | mean y: 2346541.1024734983
[2024-05-24 03:07:07] 2024-05-24 01:06:54,472 | INFO     | -- intersect: 3828057668.445518
[2024-05-24 03:07:07] 2024-05-24 01:06:54,472 | INFO     | intersect: 3828057668.445518
[2024-05-24 03:07:07] 2024-05-24 01:06:54,472 | INFO     | chi2: 0.8241849631718802
[2024-05-24 03:07:07] 2024-05-24 01:06:54,472 | INFO     | current chi2=0.8241849631718802 (change=5.458548360291876 %)
[2024-05-24 03:07:07] 2024-05-24 01:06:54,472 | INFO     | left removable region: 30
[2024-05-24 03:07:07] 2024-05-24 01:06:54,473 | INFO     | model: linear, x: [1716496509.0, 1716496570.0, 1716496631.0, 1716496692.0, 1716496753.0, 1716496814.0, 1716496875.0, 1716496936.0, 1716496997.0, 1716497058.0, 1716
[2024-05-24 03:07:07] 2024-05-24 01:06:54,473 | INFO     | sum of square deviations: 5576683165.5
[2024-05-24 03:07:07] 2024-05-24 01:06:54,474 | INFO     | sum of deviations: 2032691318.4999998
[2024-05-24 03:07:07] 2024-05-24 01:06:54,474 | INFO     | mean x: 1716504469.5
[2024-05-24 03:07:07] 2024-05-24 01:06:54,474 | INFO     | mean y: 2354149.080152672
[2024-05-24 03:07:07] 2024-05-24 01:06:54,474 | INFO     | -- intersect: -623308745.8292207
[2024-05-24 03:07:07] 2024-05-24 01:06:54,474 | INFO     | intersect: -623308745.8292207
[2024-05-24 03:07:07] 2024-05-24 01:06:54,475 | INFO     | chi2: 0.0015052275273419787
[2024-05-24 03:07:07] 2024-05-24 01:06:54,475 | INFO     | -- intersect: -623308745.8292207
[2024-05-24 03:07:07] 2024-05-24 01:06:54,475 | INFO     | current memory leak: 0.36 B/s (using 262 data points, chi2=0.00)
[2024-05-24 03:07:07] 2024-05-24 01:06:54,475 | INFO     | ..............................
[2024-05-24 03:07:07] 2024-05-24 01:06:54,475 | INFO     | . Timing measurements:
[2024-05-24 03:07:07] 2024-05-24 01:06:54,475 | INFO     | . get job = 0 s
[2024-05-24 03:07:07] 2024-05-24 01:06:54,475 | INFO     | . initial setup = 1 s
[2024-05-24 03:07:07] 2024-05-24 01:06:54,475 | INFO     | . payload setup = 5 s
[2024-05-24 03:07:07] 2024-05-24 01:06:54,476 | INFO     | . stage-in = 0 s
[2024-05-24 03:07:07] 2024-05-24 01:06:54,476 | INFO     | . payload execution = 18133 s
[2024-05-24 03:07:07] 2024-05-24 01:06:54,476 | INFO     | . stage-out = 0 s
[2024-05-24 03:07:07] 2024-05-24 01:06:54,476 | INFO     | . log creation = 0 s
[2024-05-24 03:07:07] 2024-05-24 01:06:54,476 | INFO     | ..............................
[2024-05-24 03:07:07] 2024-05-24 01:06:54,532 | INFO     | 
[2024-05-24 03:07:07] 2024-05-24 01:06:54,533 | INFO     | job summary report
[2024-05-24 03:07:07] 2024-05-24 01:06:54,533 | INFO     | --------------------------------------------------
[2024-05-24 03:07:07] 2024-05-24 01:06:54,533 | INFO     | PanDA job id: 6208106372
[2024-05-24 03:07:07] 2024-05-24 01:06:54,533 | INFO     | task id: 38776146
[2024-05-24 03:07:07] 2024-05-24 01:06:54,533 | INFO     | errors: (none)
[2024-05-24 03:07:07] 2024-05-24 01:06:54,533 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-24 03:07:07] 2024-05-24 01:06:54,533 | INFO     | pilot state: finished 
[2024-05-24 03:07:07] 2024-05-24 01:06:54,534 | INFO     | transexitcode: 0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,534 | INFO     | exeerrorcode: 0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,534 | INFO     | exeerrordiag: 
[2024-05-24 03:07:07] 2024-05-24 01:06:54,534 | INFO     | exitcode: 0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,534 | INFO     | exitmsg: OK
[2024-05-24 03:07:07] 2024-05-24 01:06:54,534 | INFO     | cpuconsumptiontime: 69512 s
[2024-05-24 03:07:07] 2024-05-24 01:06:54,534 | INFO     | nevents: 400
[2024-05-24 03:07:07] 2024-05-24 01:06:54,534 | INFO     | neventsw: 0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,534 | INFO     | pid: 3438557
[2024-05-24 03:07:07] 2024-05-24 01:06:54,535 | INFO     | pgrp: 3438557
[2024-05-24 03:07:07] 2024-05-24 01:06:54,535 | INFO     | corecount: 4
[2024-05-24 03:07:07] 2024-05-24 01:06:54,535 | INFO     | event service: False
[2024-05-24 03:07:07] 2024-05-24 01:06:54,535 | INFO     | sizes: {0: 2378713, 5: 2378919, 11: 2378975, 18142: 2411653, 18143: 2420691, 18147: 2420805}
[2024-05-24 03:07:07] 2024-05-24 01:06:54,535 | INFO     | --------------------------------------------------
[2024-05-24 03:07:07] 2024-05-24 01:06:54,535 | INFO     | 
[2024-05-24 03:07:07] 2024-05-24 01:06:54,535 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2024-05-24 03:07:07] 2024-05-24 01:06:54,554 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,554 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,554 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,554 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-24 03:07:07] 2024-05-24 01:06:54,555 | INFO     | job 6208106372 has completed (purged errors)
[2024-05-24 03:07:07] 2024-05-24 01:06:54,556 | INFO     | overall cleanup function is called
[2024-05-24 03:07:07] 2024-05-24 01:06:55,562 | INFO     | --- collectZombieJob: --- 10, [3438557]
[2024-05-24 03:07:07] 2024-05-24 01:06:55,563 | INFO     | zombie collector waiting for pid 3438557
[2024-05-24 03:07:07] 2024-05-24 01:06:55,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-24 03:07:07] 2024-05-24 01:06:56,516 | WARNING  | process 3438557 is no longer using CPU - aborting
[2024-05-24 03:07:07] 2024-05-24 01:06:56,516 | INFO     | aborting job monitoring since job object (job id=6208106372) has expired
[2024-05-24 03:07:07] 2024-05-24 01:06:56,567 | INFO     | collected zombie processes
[2024-05-24 03:07:07] 2024-05-24 01:06:56,568 | INFO     | will now attempt to kill all subprocesses of pid=3438557
[2024-05-24 03:07:07] 2024-05-24 01:06:56,701 | INFO     | process IDs to be killed: [3438557] (in reverse order)
[2024-05-24 03:07:07] 2024-05-24 01:06:56,797 | WARNING  | found no corresponding commands to process id(s)
[2024-05-24 03:07:07] 2024-05-24 01:06:56,797 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-24 03:07:07] 2024-05-24 01:06:56,804 | INFO     | did not find any defunct processes belonging to 3438557
[2024-05-24 03:07:07] 2024-05-24 01:06:56,807 | INFO     | did not find any defunct processes belonging to 3438557
[2024-05-24 03:07:07] 2024-05-24 01:06:56,808 | INFO     | ready for new job
[2024-05-24 03:07:07] 2024-05-24 01:06:56,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-24 03:07:07] 2024-05-24 01:06:56,809 | INFO     | *************************************
[2024-05-24 03:07:07] 2024-05-24 01:06:56,809 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-24 03:07:07] 2024-05-24 01:06:56,809 | INFO     | *************************************
[2024-05-24 03:07:07] 2024-05-24 01:06:56,810 | INFO     | 
[2024-05-24 03:07:07] 2024-05-24 01:06:56,811 | INFO     | architecture information:
[2024-05-24 03:07:07] 2024-05-24 01:06:56,811 | INFO     | executing command: cat /etc/os-release
[2024-05-24 03:07:07] 2024-05-24 01:06:56,824 | INFO     | cat /etc/os-release:
[2024-05-24 03:07:07] NAME="CentOS Linux"
[2024-05-24 03:07:07] VERSION="7 (Core)"
[2024-05-24 03:07:07] ID="centos"
[2024-05-24 03:07:07] ID_LIKE="rhel fedora"
[2024-05-24 03:07:07] VERSION_ID="7"
[2024-05-24 03:07:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-24 03:07:07] ANSI_COLOR="0;31"
[2024-05-24 03:07:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-24 03:07:07] HOME_URL="https://www.centos.org/"
[2024-05-24 03:07:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-24 03:07:07] 
[2024-05-24 03:07:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-24 03:07:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-24 03:07:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-24 03:07:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-24 03:07:07] 
[2024-05-24 03:07:07] 2024-05-24 01:06:56,824 | INFO     | *************************************
[2024-05-24 03:07:07] 2024-05-24 01:06:57,327 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2024-05-24 03:07:07] 2024-05-24 01:06:57,348 | INFO     | sufficient remaining disk space (1646407974912 B)
[2024-05-24 03:07:07] 2024-05-24 01:06:57,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-24 03:07:07] 2024-05-24 01:06:57,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-24 03:07:07] 2024-05-24 01:06:57,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-24 03:07:07] 2024-05-24 01:06:57,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-24 03:07:07] 2024-05-24 01:06:57,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-24 03:07:07] 2024-05-24 01:06:57,349 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-24 03:07:07] 2024-05-24 01:06:57,350 | INFO     | will abort loop
[2024-05-24 03:07:07] 2024-05-24 01:06:57,351 | INFO     | found 0 job(s) in 20 queues
[2024-05-24 03:07:07] 2024-05-24 01:06:57,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-24 03:07:07] 2024-05-24 01:06:57,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-24 03:07:07] 2024-05-24 01:06:57,648 | INFO     | all payload control threads have been joined
[2024-05-24 03:07:07] 2024-05-24 01:06:58,029 | INFO     | all data control threads have been joined
[2024-05-24 03:07:07] 2024-05-24 01:06:58,154 | INFO     | all job control threads have been joined
[2024-05-24 03:07:07] 2024-05-24 01:06:58,354 | INFO     | [job] retrieve thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:58,355 | INFO     | [job] job monitor thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:58,356 | INFO     | [job] validate thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:58,408 | INFO     | [job] create_data_payload thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:58,634 | INFO     | [data] copytool_in thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:58,654 | INFO     | [payload] control thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:58,687 | INFO     | [payload] validate_pre thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:58,690 | INFO     | [payload] execute_payloads thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:58,725 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:59,030 | INFO     | [data] control thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:59,038 | INFO     | [payload] failed_post thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:59,159 | INFO     | [job] control thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:59,242 | INFO     | [payload] validate_post thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:59,355 | INFO     | [data] copytool_out thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:06:59,542 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-24 03:07:07] 2024-05-24 01:07:00,548 | INFO     | [job] queue monitor thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:07:01,356 | INFO     | [data] queue_monitor thread has finished
[2024-05-24 03:07:07] 2024-05-24 01:07:01,663 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47666574566464)>', '<ExcThread(monitor, started 47666747918080)>']
[2024-05-24 03:07:07] 2024-05-24 01:07:02,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-24 03:07:07] 2024-05-24 01:07:02,376 | INFO     | [monitor] control thread has ended
[2024-05-24 03:07:07] 2024-05-24 01:07:06,689 | INFO     | all workflow threads have been joined
[2024-05-24 03:07:07] 2024-05-24 01:07:06,689 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-24 03:07:07] 2024-05-24 01:07:06,690 | INFO     | traces error code: 0
[2024-05-24 03:07:07] 2024-05-24 01:07:06,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-24 03:07:07] 2024-05-24 01:07:06,754 [wrapper] ==== pilot stdout END ====
[2024-05-24 03:07:07] 2024-05-24 01:07:06,756 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-24 03:07:07] 2024-05-24 01:07:06,758 [wrapper] pilotpid: 3431643
[2024-05-24 03:07:07] 2024-05-24 01:07:06,760 [wrapper] Pilot exit status: 0
[2024-05-24 03:07:07] 2024-05-24 01:07:06,766 [wrapper] pandaids: 6208106372
[2024-05-24 03:07:07] 2024-05-24 01:07:06,806 [wrapper] cleanup: SIGTERM to supervisor_pilot 3897923 3431644
[2024-05-24 03:07:07] 2024-05-24 01:07:06,808 [wrapper] Test setup, not cleaning
[2024-05-24 03:07:07] 2024-05-24 01:07:06,810 [wrapper] ==== wrapper stdout END ====
[2024-05-24 03:07:07] 2024-05-24 01:07:06,811 [wrapper] ==== wrapper stderr END ====
[2024-05-24 03:07:07] 2024-05-24 01:07:06,816 [wrapper] apfmon messages muted
[2024-05-24 03:07:07]  *** Error codes and diagnostics ***
[2024-05-24 03:07:07]     "exeErrorCode": 0,
[2024-05-24 03:07:07]     "exeErrorDiag": "",
[2024-05-24 03:07:07]     "pilotErrorCode": 0,
[2024-05-24 03:07:07]     "pilotErrorDiag": "",
[2024-05-24 03:07:07]  *** Listing of results directory ***
[2024-05-24 03:07:07] total 870488
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc    467845 May 17 15:56 pilot3.tar.gz
[2024-05-24 03:07:07] -rwx------ 1 boinc boinc     32251 May 17 16:02 runpilot2-wrapper.sh
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc      5633 May 17 16:02 queuedata.json
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc       100 May 23 22:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-24 03:07:07] -rwxr-xr-x 1 boinc boinc      7986 May 23 22:03 run_atlas
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc       105 May 23 22:03 job.xml
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc      6457 May 23 22:03 init_data.xml
[2024-05-24 03:07:07] -rw-r--r-- 2 boinc boinc 612564827 May 23 22:03 EVNT.38776140._000269.pool.root.1
[2024-05-24 03:07:07] drwxrwx--x 2 boinc boinc      4096 May 23 22:03 shared
[2024-05-24 03:07:07] -rw-r--r-- 2 boinc boinc    480001 May 23 22:03 input.tar.gz
[2024-05-24 03:07:07] -rw-r--r-- 2 boinc boinc     17537 May 23 22:03 start_atlas.sh
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc         0 May 23 22:03 boinc_lockfile
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc      2614 May 23 22:04 pandaJob.out
[2024-05-24 03:07:07] -rw------- 1 boinc boinc       424 May 23 22:04 setup.sh.local
[2024-05-24 03:07:07] -rw------- 1 boinc boinc   1009203 May 23 22:04 agis_schedconf.cvmfs.json
[2024-05-24 03:07:07] -rw------- 1 boinc boinc   1317222 May 23 22:04 cric_ddmendpoints.json
[2024-05-24 03:07:07] drwx------ 4 boinc boinc      4096 May 23 22:04 pilot3
[2024-05-24 03:07:07] -rw------- 1 boinc boinc        95 May 24 03:06 pilot_heartbeat.json
[2024-05-24 03:07:07] -rw------- 1 boinc boinc 270364523 May 24 03:06 HITS.38776146._015331.pool.root.1
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc       532 May 24 03:06 boinc_task_state.xml
[2024-05-24 03:07:07] -rw------- 1 boinc boinc      1053 May 24 03:06 memory_monitor_summary.json
[2024-05-24 03:07:07] -rw------- 1 boinc boinc         0 May 24 03:06 agis_ddmendpoints.agis.ALL.json
[2024-05-24 03:07:07] -rw------- 1 boinc boinc    408152 May 24 03:06 log.38776146._015331.job.log.tgz.1
[2024-05-24 03:07:07] -rw------- 1 boinc boinc      7783 May 24 03:06 heartbeat.json
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc      8192 May 24 03:07 boinc_mmap_file
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc        28 May 24 03:07 wrapper_checkpoint.txt
[2024-05-24 03:07:07] -rw------- 1 boinc boinc      4347 May 24 03:07 pilotlog.txt
[2024-05-24 03:07:07] -rw------- 1 boinc boinc   2057870 May 24 03:07 log.38776146._015331.job.log.1
[2024-05-24 03:07:07] -rw------- 1 boinc boinc       357 May 24 03:07 output.list
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc       620 May 24 03:07 runtime_log
[2024-05-24 03:07:07] -rw------- 1 boinc boinc   2488320 May 24 03:07 result.tar.gz
[2024-05-24 03:07:07] -rw------- 1 boinc boinc       659 May 24 03:07 x5QMDmZLDS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm77QKDmJDM4Lo.diag
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc     11410 May 24 03:07 runtime_log.err
[2024-05-24 03:07:07] -rw-r--r-- 1 boinc boinc     21357 May 24 03:07 stderr.txt
[2024-05-24 03:07:07] HITS file was successfully produced:
[2024-05-24 03:07:07] -rw------- 1 boinc boinc 270364523 May 24 03:06 shared/HITS.pool.root.1
[2024-05-24 03:07:07]  *** Contents of shared directory: ***
[2024-05-24 03:07:07] total 865168
[2024-05-24 03:07:07] -rw-r--r-- 2 boinc boinc 612564827 May 23 22:03 ATLAS.root_0
[2024-05-24 03:07:07] -rw-r--r-- 2 boinc boinc    480001 May 23 22:03 input.tar.gz
[2024-05-24 03:07:07] -rw-r--r-- 2 boinc boinc     17537 May 23 22:03 start_atlas.sh
[2024-05-24 03:07:07] -rw------- 1 boinc boinc 270364523 May 24 03:06 HITS.pool.root.1
[2024-05-24 03:07:07] -rw------- 1 boinc boinc   2488320 May 24 03:07 result.tar.gz
03:07:09 (3427407): run_atlas exited; CPU time 69167.569346
03:07:09 (3427407): called boinc_finish(0)

</stderr_txt>
]]>

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