Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:57:19 (621849): wrapper (7.7.26015): starting
11:57:19 (621849): wrapper: running run_atlas (--nthreads 6)
[2024-05-20 11:57:19] Arguments: --nthreads 6
[2024-05-20 11:57:19] Threads: 6
[2024-05-20 11:57:19] Checking for CVMFS
[2024-05-20 11:57:20] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-20 11:57:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-20 11:57:20] Running cvmfs_config stat atlas.cern.ch
[2024-05-20 11:57:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-20 11:57:20] 2.10.1.0 2030 2896 66752 132945 0 56 5576542 6144000 0 130560 0 2596891 99.990 368220 7580 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.202:3128 1
[2024-05-20 11:57:20] CVMFS is ok
[2024-05-20 11:57:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 11:57:20] Checking for apptainer binary...
[2024-05-20 11:57:20] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-20 11:57:20] Running /usr/bin/apptainer --version
[2024-05-20 11:57:20] apptainer version 1.3.0
[2024-05-20 11:57:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 11:57:20] Beta
[2024-05-20 11:57:20] apptainer works
[2024-05-20 11:57:20] Set ATHENA_PROC_NUMBER=6
[2024-05-20 11:57:20] Set ATHENA_CORE_NUMBER=6
[2024-05-20 11:57:20] Starting ATLAS job with PandaID=6208083740
[2024-05-20 11:57:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 15:33:24]  *** The last 200 lines of the pilot log: ***
[2024-05-20 15:33:24] 2024-05-20 13:33:02,074 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 15:33:24] 2024-05-20 13:33:02,074 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 15:33:24] 2024-05-20 13:33:02,075 | INFO     | fitting pss+swap vs Time
[2024-05-20 15:33:24] 2024-05-20 13:33:02,076 | INFO     | model: linear, x: [1716199064.0, 1716199125.0, 1716199186.0, 1716199247.0, 1716199308.0, 1716199369.0, 1716199430.0, 1716199491.0, 1716199552.0, 1716199613.0, 1716
[2024-05-20 15:33:24] 2024-05-20 13:33:02,076 | INFO     | sum of square deviations: 2954447953.0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,076 | INFO     | sum of deviations: 45673254649.5
[2024-05-20 15:33:24] 2024-05-20 13:33:02,076 | INFO     | mean x: 1716205499.5
[2024-05-20 15:33:24] 2024-05-20 13:33:02,076 | INFO     | mean y: 2530707.787735849
[2024-05-20 15:33:24] 2024-05-20 13:33:02,076 | INFO     | -- intersect: -26528547874.910805
[2024-05-20 15:33:24] 2024-05-20 13:33:02,076 | INFO     | intersect: -26528547874.910805
[2024-05-20 15:33:24] 2024-05-20 13:33:02,077 | INFO     | chi2: 1.6971950688209145
[2024-05-20 15:33:24] 2024-05-20 13:33:02,077 | INFO     | model: linear, x: [1716199064.0, 1716199125.0, 1716199186.0, 1716199247.0, 1716199308.0, 1716199369.0, 1716199430.0, 1716199491.0, 1716199552.0, 1716199613.0, 1716
[2024-05-20 15:33:24] 2024-05-20 13:33:02,077 | INFO     | sum of square deviations: 2750295288.0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,077 | INFO     | sum of deviations: 44998980505.0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,077 | INFO     | mean x: 1716205347.0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,077 | INFO     | mean y: 2530204.4830917874
[2024-05-20 15:33:24] 2024-05-20 13:33:02,077 | INFO     | -- intersect: -28077178650.484688
[2024-05-20 15:33:24] 2024-05-20 13:33:02,077 | INFO     | intersect: -28077178650.484688
[2024-05-20 15:33:24] 2024-05-20 13:33:02,078 | INFO     | chi2: 1.6967729327718017
[2024-05-20 15:33:24] 2024-05-20 13:33:02,078 | INFO     | current chi2=1.6967729327718017 (change=0.024872571036048067 %)
[2024-05-20 15:33:24] 2024-05-20 13:33:02,078 | INFO     | right removable region: 206
[2024-05-20 15:33:24] 2024-05-20 13:33:02,078 | INFO     | model: linear, x: [1716199369.0, 1716199430.0, 1716199491.0, 1716199552.0, 1716199613.0, 1716199674.0, 1716199735.0, 1716199796.0, 1716199857.0, 1716199918.0, 1716
[2024-05-20 15:33:24] 2024-05-20 13:33:02,078 | INFO     | sum of square deviations: 2750295288.0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,078 | INFO     | sum of deviations: 5724906608.000001
[2024-05-20 15:33:24] 2024-05-20 13:33:02,078 | INFO     | mean x: 1716205652.0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,079 | INFO     | mean y: 2560332.275362319
[2024-05-20 15:33:24] 2024-05-20 13:33:02,079 | INFO     | -- intersect: -3569825920.462802
[2024-05-20 15:33:24] 2024-05-20 13:33:02,079 | INFO     | intersect: -3569825920.462802
[2024-05-20 15:33:24] 2024-05-20 13:33:02,079 | INFO     | chi2: 0.0421432251293136
[2024-05-20 15:33:24] 2024-05-20 13:33:02,079 | INFO     | current chi2=0.0421432251293136 (change=97.51688972567003 %)
[2024-05-20 15:33:24] 2024-05-20 13:33:02,079 | INFO     | model: linear, x: [1716199674.0, 1716199735.0, 1716199796.0, 1716199857.0, 1716199918.0, 1716199979.0, 1716200040.0, 1716200101.0, 1716200162.0, 1716200223.0, 1716
[2024-05-20 15:33:24] 2024-05-20 13:33:02,079 | INFO     | sum of square deviations: 2555770710.5
[2024-05-20 15:33:24] 2024-05-20 13:33:02,079 | INFO     | sum of deviations: 6299831028.499994
[2024-05-20 15:33:24] 2024-05-20 13:33:02,080 | INFO     | mean x: 1716205804.5
[2024-05-20 15:33:24] 2024-05-20 13:33:02,080 | INFO     | mean y: 2559910.0247524753
[2024-05-20 15:33:24] 2024-05-20 13:33:02,080 | INFO     | -- intersect: -4227790854.2524233
[2024-05-20 15:33:24] 2024-05-20 13:33:02,080 | INFO     | intersect: -4227790854.2524233
[2024-05-20 15:33:24] 2024-05-20 13:33:02,080 | INFO     | chi2: 0.021669728758153643
[2024-05-20 15:33:24] 2024-05-20 13:33:02,080 | INFO     | current chi2=0.021669728758153643 (change=48.58075362846208 %)
[2024-05-20 15:33:24] 2024-05-20 13:33:02,080 | INFO     | model: linear, x: [1716199979.0, 1716200040.0, 1716200101.0, 1716200162.0, 1716200223.0, 1716200284.0, 1716200345.0, 1716200406.0, 1716200467.0, 1716200528.0, 1716
[2024-05-20 15:33:24] 2024-05-20 13:33:02,080 | INFO     | sum of square deviations: 2370641658.0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,080 | INFO     | sum of deviations: 3480343226.9999986
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | mean x: 1716205957.0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | mean y: 2562225.7157360404
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | -- intersect: -2517002786.7463884
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | intersect: -2517002786.7463884
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | chi2: 0.016319349510730684
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | current chi2=0.016319349510730684 (change=24.690568613646253 %)
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | left removable region: 30
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | model: linear, x: [1716200894.0, 1716200955.0, 1716201016.0, 1716201077.0, 1716201138.0, 1716201199.0, 1716201260.0, 1716201321.0, 1716201382.0, 1716201443.0, 1716
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | sum of square deviations: 1690450300.0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,081 | INFO     | sum of deviations: 281590304.4999997
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | mean x: 1716206231.5
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | mean y: 2565995.0511363638
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | -- intersect: -283314657.7624258
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | intersect: -283314657.7624258
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | chi2: 0.011734600378078866
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | -- intersect: -283314657.7624258
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | current memory leak: 0.17 B/s (using 176 data points, chi2=0.01)
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | ..............................
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | . Timing measurements:
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | . get job = 0 s
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | . initial setup = 0 s
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | . payload setup = 2 s
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | . stage-in = 0 s
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | . payload execution = 12911 s
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | . stage-out = 0 s
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | . log creation = 0 s
[2024-05-20 15:33:24] 2024-05-20 13:33:02,082 | INFO     | ..............................
[2024-05-20 15:33:24] 2024-05-20 13:33:02,413 | INFO     | 
[2024-05-20 15:33:24] 2024-05-20 13:33:02,413 | INFO     | job summary report
[2024-05-20 15:33:24] 2024-05-20 13:33:02,413 | INFO     | --------------------------------------------------
[2024-05-20 15:33:24] 2024-05-20 13:33:02,413 | INFO     | PanDA job id: 6208083740
[2024-05-20 15:33:24] 2024-05-20 13:33:02,413 | INFO     | task id: 38920995
[2024-05-20 15:33:24] 2024-05-20 13:33:02,414 | INFO     | errors: (none)
[2024-05-20 15:33:24] 2024-05-20 13:33:02,414 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 15:33:24] 2024-05-20 13:33:02,414 | INFO     | pilot state: finished 
[2024-05-20 15:33:24] 2024-05-20 13:33:02,414 | INFO     | transexitcode: 0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,414 | INFO     | exeerrorcode: 0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,414 | INFO     | exeerrordiag: 
[2024-05-20 15:33:24] 2024-05-20 13:33:02,415 | INFO     | exitcode: 0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,415 | INFO     | exitmsg: OK
[2024-05-20 15:33:24] 2024-05-20 13:33:02,415 | INFO     | cpuconsumptiontime: 74692 s
[2024-05-20 15:33:24] 2024-05-20 13:33:02,415 | INFO     | nevents: 400
[2024-05-20 15:33:24] 2024-05-20 13:33:02,415 | INFO     | neventsw: 0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,415 | INFO     | pid: 632481
[2024-05-20 15:33:24] 2024-05-20 13:33:02,415 | INFO     | pgrp: 632481
[2024-05-20 15:33:24] 2024-05-20 13:33:02,416 | INFO     | corecount: 6
[2024-05-20 15:33:24] 2024-05-20 13:33:02,416 | INFO     | event service: False
[2024-05-20 15:33:24] 2024-05-20 13:33:02,416 | INFO     | sizes: {0: 2392172, 2: 2392378, 11: 2392406, 12917: 2422370, 12918: 2431330, 12920: 2431386, 12923: 2431684}
[2024-05-20 15:33:24] 2024-05-20 13:33:02,416 | INFO     | --------------------------------------------------
[2024-05-20 15:33:24] 2024-05-20 13:33:02,416 | INFO     | 
[2024-05-20 15:33:24] 2024-05-20 13:33:02,416 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-05-20 15:33:24] 2024-05-20 13:33:02,435 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,435 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,435 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,435 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,436 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 15:33:24] 2024-05-20 13:33:02,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,437 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 15:33:24] 2024-05-20 13:33:02,437 | INFO     | job 6208083740 has completed (purged errors)
[2024-05-20 15:33:24] 2024-05-20 13:33:02,437 | INFO     | overall cleanup function is called
[2024-05-20 15:33:24] 2024-05-20 13:33:03,445 | INFO     | --- collectZombieJob: --- 10, [632481]
[2024-05-20 15:33:24] 2024-05-20 13:33:03,445 | INFO     | zombie collector waiting for pid 632481
[2024-05-20 15:33:24] 2024-05-20 13:33:03,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 15:33:24] 2024-05-20 13:33:04,451 | INFO     | collected zombie processes
[2024-05-20 15:33:24] 2024-05-20 13:33:04,452 | INFO     | will now attempt to kill all subprocesses of pid=632481
[2024-05-20 15:33:24] 2024-05-20 13:33:04,500 | INFO     | process IDs to be killed: [632481] (in reverse order)
[2024-05-20 15:33:24] 2024-05-20 13:33:04,557 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 15:33:24] 2024-05-20 13:33:04,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 15:33:24] 2024-05-20 13:33:04,562 | INFO     | did not find any defunct processes belonging to 632481
[2024-05-20 15:33:24] 2024-05-20 13:33:04,566 | INFO     | did not find any defunct processes belonging to 632481
[2024-05-20 15:33:24] 2024-05-20 13:33:04,566 | INFO     | ready for new job
[2024-05-20 15:33:24] 2024-05-20 13:33:04,566 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 15:33:24] 2024-05-20 13:33:04,569 | INFO     | *************************************
[2024-05-20 15:33:24] 2024-05-20 13:33:04,569 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 15:33:24] 2024-05-20 13:33:04,569 | INFO     | *************************************
[2024-05-20 15:33:24] 2024-05-20 13:33:04,569 | INFO     | 
[2024-05-20 15:33:24] 2024-05-20 13:33:04,570 | INFO     | architecture information:
[2024-05-20 15:33:24] 2024-05-20 13:33:04,571 | INFO     | executing command: cat /etc/os-release
[2024-05-20 15:33:24] 2024-05-20 13:33:04,591 | INFO     | cat /etc/os-release:
[2024-05-20 15:33:24] NAME="CentOS Linux"
[2024-05-20 15:33:24] VERSION="7 (Core)"
[2024-05-20 15:33:24] ID="centos"
[2024-05-20 15:33:24] ID_LIKE="rhel fedora"
[2024-05-20 15:33:24] VERSION_ID="7"
[2024-05-20 15:33:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 15:33:24] ANSI_COLOR="0;31"
[2024-05-20 15:33:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 15:33:24] HOME_URL="https://www.centos.org/"
[2024-05-20 15:33:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 15:33:24] 
[2024-05-20 15:33:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 15:33:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 15:33:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 15:33:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 15:33:24] 
[2024-05-20 15:33:24] 2024-05-20 13:33:04,591 | INFO     | *************************************
[2024-05-20 15:33:24] 2024-05-20 13:33:05,095 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-05-20 15:33:24] 2024-05-20 13:33:05,108 | INFO     | sufficient remaining disk space (273453940736 B)
[2024-05-20 15:33:24] 2024-05-20 13:33:05,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 15:33:24] 2024-05-20 13:33:05,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 15:33:24] 2024-05-20 13:33:05,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 15:33:24] 2024-05-20 13:33:05,181 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 15:33:24] 2024-05-20 13:33:05,267 | INFO     | all payload control threads have been joined
[2024-05-20 15:33:24] 2024-05-20 13:33:05,281 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 15:33:24] 2024-05-20 13:33:05,281 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 15:33:24] 2024-05-20 13:33:05,281 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 15:33:24] 2024-05-20 13:33:05,486 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 15:33:24] 2024-05-20 13:33:05,486 | INFO     | aborting loop
[2024-05-20 15:33:24] 2024-05-20 13:33:06,115 | INFO     | [job] retrieve thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:06,120 | INFO     | all data control threads have been joined
[2024-05-20 15:33:24] 2024-05-20 13:33:06,271 | INFO     | [payload] control thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:06,422 | INFO     | all job control threads have been joined
[2024-05-20 15:33:24] 2024-05-20 13:33:06,492 | INFO     | [job] job monitor thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:06,519 | INFO     | [job] validate thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:06,545 | INFO     | [payload] failed_post thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:06,660 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:06,726 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:07,008 | INFO     | [payload] validate_post thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:07,115 | INFO     | [data] copytool_out thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:07,126 | INFO     | [data] control thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:07,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 15:33:24] 2024-05-20 13:33:07,346 | INFO     | [data] copytool_in thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:07,367 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:07,428 | INFO     | [job] control thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:08,137 | INFO     | [job] queue monitor thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:09,188 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:16,119 | INFO     | job.realtimelogging is not enabled
[2024-05-20 15:33:24] 2024-05-20 13:33:17,125 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 15:33:24] 2024-05-20 13:33:19,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501296326464)>', '<ExcThread(monitor, started 140500963145472)>']
[2024-05-20 15:33:24] 2024-05-20 13:33:19,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 15:33:24] 2024-05-20 13:33:19,356 | INFO     | [monitor] control thread has ended
[2024-05-20 15:33:24] 2024-05-20 13:33:24,116 | INFO     | all workflow threads have been joined
[2024-05-20 15:33:24] 2024-05-20 13:33:24,117 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 15:33:24] 2024-05-20 13:33:24,117 | INFO     | traces error code: 0
[2024-05-20 15:33:24] 2024-05-20 13:33:24,118 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 15:33:24] 2024-05-20 13:33:24,169 [wrapper] ==== pilot stdout END ====
[2024-05-20 15:33:24] 2024-05-20 13:33:24,170 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 15:33:24] 2024-05-20 13:33:24,172 [wrapper] pilotpid: 626039
[2024-05-20 15:33:24] 2024-05-20 13:33:24,174 [wrapper] Pilot exit status: 0
[2024-05-20 15:33:24] 2024-05-20 13:33:24,179 [wrapper] pandaids: 6208083740
[2024-05-20 15:33:24] 2024-05-20 13:33:24,193 [wrapper] cleanup: SIGTERM to supervisor_pilot  656876 626040
[2024-05-20 15:33:24] 2024-05-20 13:33:24,195 [wrapper] Test setup, not cleaning
[2024-05-20 15:33:24] 2024-05-20 13:33:24,197 [wrapper] ==== wrapper stdout END ====
[2024-05-20 15:33:24] 2024-05-20 13:33:24,198 [wrapper] ==== wrapper stderr END ====
[2024-05-20 15:33:24] 2024-05-20 13:33:24,201 [wrapper] apfmon messages muted
[2024-05-20 15:33:24]  *** Error codes and diagnostics ***
[2024-05-20 15:33:24]     "exeErrorCode": 0,
[2024-05-20 15:33:24]     "exeErrorDiag": "",
[2024-05-20 15:33:24]     "pilotErrorCode": 0,
[2024-05-20 15:33:24]     "pilotErrorDiag": "",
[2024-05-20 15:33:24]  *** Listing of results directory ***
[2024-05-20 15:33:24] insgesamt 968816
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc    467845 17. Mai 14:59 pilot3.tar.gz
[2024-05-20 15:33:24] -rwx------ 1 boinc boinc     32251 17. Mai 15:15 runpilot2-wrapper.sh
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc      5633 17. Mai 15:15 queuedata.json
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc       100 20. Mai 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 15:33:24] -rwxr-xr-x 1 boinc boinc      7986 20. Mai 11:57 run_atlas
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc       105 20. Mai 11:57 job.xml
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc      6703 20. Mai 11:57 init_data.xml
[2024-05-20 15:33:24] -rw-r--r-- 2 boinc boinc 631497499 20. Mai 11:57 EVNT.38776180._000058.pool.root.1
[2024-05-20 15:33:24] drwxrwx--x 2 boinc boinc      4096 20. Mai 11:57 shared
[2024-05-20 15:33:24] -rw-r--r-- 2 boinc boinc    480004 20. Mai 11:57 input.tar.gz
[2024-05-20 15:33:24] -rw-r--r-- 2 boinc boinc     17537 20. Mai 11:57 start_atlas.sh
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc         0 20. Mai 11:57 boinc_lockfile
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc      2612 20. Mai 11:57 pandaJob.out
[2024-05-20 15:33:24] -rw------- 1 boinc boinc       462 20. Mai 11:57 setup.sh.local
[2024-05-20 15:33:24] -rw------- 1 boinc boinc   1013914 20. Mai 11:57 agis_schedconf.cvmfs.json
[2024-05-20 15:33:24] -rw------- 1 boinc boinc   1324701 20. Mai 11:57 cric_ddmendpoints.json
[2024-05-20 15:33:24] drwx------ 4 boinc boinc      4096 20. Mai 11:57 pilot3
[2024-05-20 15:33:24] -rw------- 1 boinc boinc 353608250 20. Mai 15:32 HITS.38920995._004853.pool.root.1
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc       531 20. Mai 15:32 boinc_task_state.xml
[2024-05-20 15:33:24] -rw------- 1 boinc boinc      1026 20. Mai 15:32 memory_monitor_summary.json
[2024-05-20 15:33:24] -rw------- 1 boinc boinc        95 20. Mai 15:32 pilot_heartbeat.json
[2024-05-20 15:33:24] -rw------- 1 boinc boinc         0 20. Mai 15:32 agis_ddmendpoints.agis.ALL.json
[2024-05-20 15:33:24] -rw------- 1 boinc boinc    352767 20. Mai 15:32 log.38920995._004853.job.log.tgz.1
[2024-05-20 15:33:24] -rw------- 1 boinc boinc      7670 20. Mai 15:33 heartbeat.json
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc      8192 20. Mai 15:33 boinc_mmap_file
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc        28 20. Mai 15:33 wrapper_checkpoint.txt
[2024-05-20 15:33:24] -rw------- 1 boinc boinc      4284 20. Mai 15:33 pilotlog.txt
[2024-05-20 15:33:24] -rw------- 1 boinc boinc   1362924 20. Mai 15:33 log.38920995._004853.job.log.1
[2024-05-20 15:33:24] -rw------- 1 boinc boinc       357 20. Mai 15:33 output.list
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc       620 20. Mai 15:33 runtime_log
[2024-05-20 15:33:24] -rw------- 1 boinc boinc   1730560 20. Mai 15:33 result.tar.gz
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc     11317 20. Mai 15:33 runtime_log.err
[2024-05-20 15:33:24] -rw------- 1 boinc boinc       631 20. Mai 15:33 DwVMDmQcCS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz4QKDm1DHv1n.diag
[2024-05-20 15:33:24] -rw-r--r-- 1 boinc boinc     21182 20. Mai 15:33 stderr.txt
[2024-05-20 15:33:24] HITS file was successfully produced:
[2024-05-20 15:33:24] -rw------- 1 boinc boinc 353608250 20. Mai 15:32 shared/HITS.pool.root.1
[2024-05-20 15:33:24]  *** Contents of shared directory: ***
[2024-05-20 15:33:24] insgesamt 964216
[2024-05-20 15:33:24] -rw-r--r-- 2 boinc boinc 631497499 20. Mai 11:57 ATLAS.root_0
[2024-05-20 15:33:24] -rw-r--r-- 2 boinc boinc    480004 20. Mai 11:57 input.tar.gz
[2024-05-20 15:33:24] -rw-r--r-- 2 boinc boinc     17537 20. Mai 11:57 start_atlas.sh
[2024-05-20 15:33:24] -rw------- 1 boinc boinc 353608250 20. Mai 15:32 HITS.pool.root.1
[2024-05-20 15:33:24] -rw------- 1 boinc boinc   1730560 20. Mai 15:33 result.tar.gz
15:33:25 (621849): run_atlas exited; CPU time 74670.850974
15:33:25 (621849): called boinc_finish(0)

</stderr_txt>
]]>

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