Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
18:41:53 (68017): wrapper (7.7.26015): starting
18:41:53 (68017): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 18:41:53] Arguments: --nthreads 12
[2024-05-17 18:41:53] Threads: 12
[2024-05-17 18:41:53] Checking for CVMFS
[2024-05-17 18:41:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 18:41:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 18:41:53] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 18:41:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 18:41:54] 2.9.2.0 9154 184272 203004 132861 3 395 34128420 45568001 13574 130560 0 1179976292 99.802 665147065 3767 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 18:41:54] CVMFS is ok
[2024-05-17 18:41:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 18:41:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 18:41:54] Further information can be found at the LHC@home message board.
[2024-05-17 18:41:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 18:41:54] Checking for apptainer binary...
[2024-05-17 18:41:54] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 18:41:54] Running /usr/bin/apptainer --version
[2024-05-17 18:41:54] apptainer version 1.1.8-1.el7
[2024-05-17 18:41:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 18:41:55] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0053.triumf.lcg
[2024-05-17 18:41:55] apptainer works
[2024-05-17 18:41:55] Set ATHENA_PROC_NUMBER=12
[2024-05-17 18:41:55] Set ATHENA_CORE_NUMBER=12
[2024-05-17 18:41:55] Starting ATLAS job with PandaID=6208061321
[2024-05-17 18:41:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 20:39:39]  *** The last 200 lines of the pilot log: ***
[2024-05-17 20:39:39] 2024-05-18 03:39:18,280 | INFO     | sum of square deviations: 412674268.7636355
[2024-05-17 20:39:39] 2024-05-18 03:39:18,280 | INFO     | sum of deviations: 61546405123.56363
[2024-05-17 20:39:39] 2024-05-18 03:39:18,280 | INFO     | mean x: 1715999895.7818182
[2024-05-17 20:39:39] 2024-05-18 03:39:18,280 | INFO     | mean y: 2578068.481818182
[2024-05-17 20:39:39] 2024-05-18 03:39:18,280 | INFO     | -- intersect: -255922331168.523
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | intersect: -255922331168.523
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | chi2: 4.975993027059472
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | current chi2=4.975993027059472 (change=13.719385494669492 %)
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | right removable region: 109
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | model: linear, x: [1715996876.0, 1715996937.0, 1715996998.0, 1715997059.0, 1715997120.0, 1715997181.0, 1715997242.0, 1715997303.0, 1715997364.0, 1715997425.0, 1715
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | sum of square deviations: 412680740.3636357
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | sum of deviations: 25390546838.999992
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | mean x: 1716000200.8181818
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | mean y: 2644042.0
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | -- intersect: -105575783088.41406
[2024-05-17 20:39:39] 2024-05-18 03:39:18,281 | INFO     | intersect: -105575783088.41406
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | chi2: 3.080677102367767
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | current chi2=3.080677102367767 (change=46.58298111766725 %)
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | model: linear, x: [1715997181.0, 1715997242.0, 1715997303.0, 1715997364.0, 1715997425.0, 1715997486.0, 1715997547.0, 1715997608.0, 1715997674.0, 1715997730.0, 1715
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | sum of square deviations: 358910917.33333224
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | sum of deviations: 1845901797.333331
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | mean x: 1716000353.3333333
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | mean y: 2710858.904761905
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | -- intersect: -8822788682.81246
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | intersect: -8822788682.81246
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | chi2: 1.582702935324607
[2024-05-17 20:39:39] 2024-05-18 03:39:18,282 | INFO     | current chi2=1.582702935324607 (change=48.62483529649496 %)
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | model: linear, x: [1715997486.0, 1715997547.0, 1715997608.0, 1715997674.0, 1715997730.0, 1715997791.0, 1715997852.0, 1715997913.0, 1715997975.0, 1715998035.0, 1715
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | sum of square deviations: 310024906.75000066
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | sum of deviations: -12033878726.449997
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | mean x: 1716000505.85
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | mean y: 2753539.97
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | -- intersect: 66610763194.42562
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | intersect: 66610763194.42562
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | chi2: 0.8620327466529598
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | current chi2=0.8620327466529598 (change=45.53414115731327 %)
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | model: linear, x: [1715997791.0, 1715997852.0, 1715997913.0, 1715997975.0, 1715998035.0, 1715998101.0, 1715998157.0, 1715998219.0, 1715998279.0, 1715998340.0, 1715
[2024-05-17 20:39:39] 2024-05-18 03:39:18,283 | INFO     | sum of square deviations: 265820014.5263156
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | sum of deviations: -9416066045.315788
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | mean x: 1716000658.3157895
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | mean y: 2744454.010526316
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | -- intersect: 60788143030.186
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | intersect: 60788143030.186
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | chi2: 0.8549314240727064
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | current chi2=0.8549314240727064 (change=0.8237880298429425 %)
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | left removable region: 40
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | model: linear, x: [1715999011.0, 1715999072.0, 1715999133.0, 1715999194.0, 1715999255.0, 1715999316.0, 1715999378.0, 1715999439.0, 1715999499.0, 1715999560.0, 1715
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | sum of square deviations: 101833439.768116
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | sum of deviations: 440849073.52173907
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | mean x: 1716001085.2753623
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | mean y: 2759548.1304347827
[2024-05-17 20:39:39] 2024-05-18 03:39:18,284 | INFO     | -- intersect: -7426013262.928052
[2024-05-17 20:39:39] 2024-05-18 03:39:18,285 | INFO     | intersect: -7426013262.928052
[2024-05-17 20:39:39] 2024-05-18 03:39:18,285 | INFO     | chi2: 0.00010526844857884643
[2024-05-17 20:39:39] 2024-05-18 03:39:18,285 | INFO     | -- intersect: -7426013262.928052
[2024-05-17 20:39:39] 2024-05-18 03:39:18,285 | INFO     | current memory leak: 4.33 B/s (using 69 data points, chi2=0.00)
[2024-05-17 20:39:39] 2024-05-18 03:39:18,285 | INFO     | ..............................
[2024-05-17 20:39:39] 2024-05-18 03:39:18,285 | INFO     | . Timing measurements:
[2024-05-17 20:39:39] 2024-05-18 03:39:18,285 | INFO     | . get job = 0 s
[2024-05-17 20:39:39] 2024-05-18 03:39:18,286 | INFO     | . initial setup = 2 s
[2024-05-17 20:39:39] 2024-05-18 03:39:18,286 | INFO     | . payload setup = 8 s
[2024-05-17 20:39:39] 2024-05-18 03:39:18,286 | INFO     | . stage-in = 0 s
[2024-05-17 20:39:39] 2024-05-18 03:39:18,286 | INFO     | . payload execution = 6979 s
[2024-05-17 20:39:39] 2024-05-18 03:39:18,286 | INFO     | . stage-out = 0 s
[2024-05-17 20:39:39] 2024-05-18 03:39:18,286 | INFO     | . log creation = 0 s
[2024-05-17 20:39:39] 2024-05-18 03:39:18,286 | INFO     | ..............................
[2024-05-17 20:39:39] 2024-05-18 03:39:18,342 | INFO     | 
[2024-05-17 20:39:39] 2024-05-18 03:39:18,342 | INFO     | job summary report
[2024-05-17 20:39:39] 2024-05-18 03:39:18,342 | INFO     | --------------------------------------------------
[2024-05-17 20:39:39] 2024-05-18 03:39:18,342 | INFO     | PanDA job id: 6208061321
[2024-05-17 20:39:39] 2024-05-18 03:39:18,342 | INFO     | task id: 38776146
[2024-05-17 20:39:39] 2024-05-18 03:39:18,342 | INFO     | errors: (none)
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | pilot state: finished 
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | transexitcode: 0
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | exeerrorcode: 0
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | exeerrordiag: 
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | exitcode: 0
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | exitmsg: OK
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | cpuconsumptiontime: 42991 s
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | nevents: 400
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | neventsw: 0
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | pid: 90118
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | pgrp: 90118
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | corecount: 12
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | event service: False
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | sizes: {0: 2391315, 1: 2392250, 9: 2392456, 11: 2392484, 6991: 2419189, 6992: 2428143, 6995: 2428327, 7007: 2428497}
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | --------------------------------------------------
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | 
[2024-05-17 20:39:39] 2024-05-18 03:39:18,343 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 20:39:39] 2024-05-18 03:39:18,460 | WARNING  | process 90118 is no longer using CPU - aborting
[2024-05-17 20:39:39] 2024-05-18 03:39:18,461 | INFO     | aborting job monitoring since job object (job id=6208061321) has expired
[2024-05-17 20:39:39] 2024-05-18 03:39:18,513 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,513 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,513 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,513 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,515 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,515 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 20:39:39] 2024-05-18 03:39:18,515 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,515 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 20:39:39] 2024-05-18 03:39:18,515 | INFO     | job 6208061321 has completed (purged errors)
[2024-05-17 20:39:39] 2024-05-18 03:39:18,515 | INFO     | overall cleanup function is called
[2024-05-17 20:39:39] 2024-05-18 03:39:19,523 | INFO     | --- collectZombieJob: --- 10, [90118]
[2024-05-17 20:39:39] 2024-05-18 03:39:19,523 | INFO     | zombie collector waiting for pid 90118
[2024-05-17 20:39:39] 2024-05-18 03:39:19,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 20:39:39] 2024-05-18 03:39:20,527 | INFO     | collected zombie processes
[2024-05-17 20:39:39] 2024-05-18 03:39:20,528 | INFO     | will now attempt to kill all subprocesses of pid=90118
[2024-05-17 20:39:39] 2024-05-18 03:39:20,716 | INFO     | process IDs to be killed: [90118] (in reverse order)
[2024-05-17 20:39:39] 2024-05-18 03:39:20,834 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 20:39:39] 2024-05-18 03:39:20,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 20:39:39] 2024-05-18 03:39:20,842 | INFO     | did not find any defunct processes belonging to 90118
[2024-05-17 20:39:39] 2024-05-18 03:39:20,848 | INFO     | did not find any defunct processes belonging to 90118
[2024-05-17 20:39:39] 2024-05-18 03:39:20,848 | INFO     | ready for new job
[2024-05-17 20:39:39] 2024-05-18 03:39:20,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 20:39:39] 2024-05-18 03:39:20,850 | INFO     | *************************************
[2024-05-17 20:39:39] 2024-05-18 03:39:20,850 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 20:39:39] 2024-05-18 03:39:20,850 | INFO     | *************************************
[2024-05-17 20:39:39] 2024-05-18 03:39:20,850 | INFO     | 
[2024-05-17 20:39:39] 2024-05-18 03:39:20,852 | INFO     | architecture information:
[2024-05-17 20:39:39] 2024-05-18 03:39:20,853 | INFO     | executing command: cat /etc/os-release
[2024-05-17 20:39:39] 2024-05-18 03:39:20,880 | INFO     | cat /etc/os-release:
[2024-05-17 20:39:39] NAME="CentOS Linux"
[2024-05-17 20:39:39] VERSION="7 (Core)"
[2024-05-17 20:39:39] ID="centos"
[2024-05-17 20:39:39] ID_LIKE="rhel fedora"
[2024-05-17 20:39:39] VERSION_ID="7"
[2024-05-17 20:39:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 20:39:39] ANSI_COLOR="0;31"
[2024-05-17 20:39:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 20:39:39] HOME_URL="https://www.centos.org/"
[2024-05-17 20:39:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 20:39:39] 
[2024-05-17 20:39:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 20:39:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 20:39:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 20:39:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 20:39:39] 
[2024-05-17 20:39:39] 2024-05-18 03:39:20,881 | INFO     | *************************************
[2024-05-17 20:39:39] 2024-05-18 03:39:21,385 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 20:39:39] 2024-05-18 03:39:21,490 | INFO     | sufficient remaining disk space (1982942150656 B)
[2024-05-17 20:39:39] 2024-05-18 03:39:21,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 20:39:39] 2024-05-18 03:39:21,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 20:39:39] 2024-05-18 03:39:21,491 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 20:39:39] 2024-05-18 03:39:21,491 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 20:39:39] 2024-05-18 03:39:21,491 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 20:39:39] 2024-05-18 03:39:21,491 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 20:39:39] 2024-05-18 03:39:21,786 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 20:39:39] 2024-05-18 03:39:21,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 20:39:39] 2024-05-18 03:39:21,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 20:39:39] 2024-05-18 03:39:21,967 | INFO     | aborting loop
[2024-05-17 20:39:39] 2024-05-18 03:39:22,270 | INFO     | all data control threads have been joined
[2024-05-17 20:39:39] 2024-05-18 03:39:22,496 | INFO     | [job] retrieve thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:22,579 | INFO     | all payload control threads have been joined
[2024-05-17 20:39:39] 2024-05-18 03:39:22,917 | INFO     | all job control threads have been joined
[2024-05-17 20:39:39] 2024-05-18 03:39:22,967 | INFO     | [job] job monitor thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,095 | INFO     | [payload] validate_post thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,190 | INFO     | [payload] failed_post thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,193 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,275 | INFO     | [data] control thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,285 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 20:39:39] 2024-05-18 03:39:23,348 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,585 | INFO     | [payload] control thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,662 | INFO     | [job] validate thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,672 | INFO     | [data] copytool_in thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,792 | INFO     | [data] copytool_out thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:23,924 | INFO     | [job] control thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:24,353 | INFO     | [job] queue monitor thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:25,847 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:31,915 | INFO     | job.realtimelogging is not enabled
[2024-05-17 20:39:39] 2024-05-18 03:39:32,920 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 20:39:39] 2024-05-18 03:39:33,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185776625472)>', '<ExcThread(monitor, started 140185358550784)>']
[2024-05-17 20:39:39] 2024-05-18 03:39:33,534 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 20:39:39] 2024-05-18 03:39:33,535 | INFO     | [monitor] control thread has ended
[2024-05-17 20:39:39] 2024-05-18 03:39:38,396 | INFO     | all workflow threads have been joined
[2024-05-17 20:39:39] 2024-05-18 03:39:38,396 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 20:39:39] 2024-05-18 03:39:38,396 | INFO     | traces error code: 0
[2024-05-17 20:39:39] 2024-05-18 03:39:38,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 20:39:39] 2024-05-18 03:39:38,526 [wrapper] ==== pilot stdout END ====
[2024-05-17 20:39:39] 2024-05-18 03:39:38,536 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 20:39:39] 2024-05-18 03:39:38,545 [wrapper] pilotpid: 74943
[2024-05-17 20:39:39] 2024-05-18 03:39:38,554 [wrapper] Pilot exit status: 0
[2024-05-17 20:39:39] 2024-05-18 03:39:38,589 [wrapper] pandaids: 6208061321
[2024-05-17 20:39:39] 2024-05-18 03:39:38,684 [wrapper] cleanup: SIGTERM to supervisor_pilot  87582 74944
[2024-05-17 20:39:39] 2024-05-18 03:39:38,698 [wrapper] Test setup, not cleaning
[2024-05-17 20:39:39] 2024-05-18 03:39:38,709 [wrapper] ==== wrapper stdout END ====
[2024-05-17 20:39:39] 2024-05-18 03:39:38,721 [wrapper] ==== wrapper stderr END ====
[2024-05-17 20:39:39] 2024-05-18 03:39:38,749 [wrapper] apfmon messages muted
[2024-05-17 20:39:39]  *** Error codes and diagnostics ***
[2024-05-17 20:39:39]     "exeErrorCode": 0,
[2024-05-17 20:39:39]     "exeErrorDiag": "",
[2024-05-17 20:39:39]     "pilotErrorCode": 0,
[2024-05-17 20:39:39]     "pilotErrorDiag": "",
[2024-05-17 20:39:39]  *** Listing of results directory ***
[2024-05-17 20:39:39] total 874748
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc    467845 May 17 05:21 pilot3.tar.gz
[2024-05-17 20:39:39] -rwx------ 1 boinc boinc     32251 May 17 05:25 runpilot2-wrapper.sh
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc      5633 May 17 05:25 queuedata.json
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc       100 May 17 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 20:39:39] -rwxr-xr-x 1 boinc boinc      7986 May 17 18:41 run_atlas
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc       105 May 17 18:41 job.xml
[2024-05-17 20:39:39] -rw-r--r-- 2 boinc boinc 616685457 May 17 18:41 EVNT.38776140._000148.pool.root.1
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc      6626 May 17 18:41 init_data.xml
[2024-05-17 20:39:39] -rw-r--r-- 2 boinc boinc     17537 May 17 18:41 start_atlas.sh
[2024-05-17 20:39:39] drwxrwx--x 2 boinc boinc      4096 May 17 18:41 shared
[2024-05-17 20:39:39] -rw-r--r-- 2 boinc boinc    480001 May 17 18:41 input.tar.gz
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc         0 May 17 18:41 boinc_lockfile
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc      2614 May 17 18:41 pandaJob.out
[2024-05-17 20:39:39] -rw------- 1 boinc boinc       424 May 17 18:41 setup.sh.local
[2024-05-17 20:39:39] -rw------- 1 boinc boinc   1019073 May 17 18:42 agis_schedconf.cvmfs.json
[2024-05-17 20:39:39] -rw------- 1 boinc boinc         0 May 17 18:42 agis_ddmendpoints.agis.ALL.json
[2024-05-17 20:39:39] -rw------- 1 boinc boinc   1324701 May 17 18:42 cric_ddmendpoints.json
[2024-05-17 20:39:39] drwx------ 4 boinc boinc      4096 May 17 18:42 pilot3
[2024-05-17 20:39:39] -rw------- 1 boinc boinc 273720630 May 17 20:38 HITS.38776146._015052.pool.root.1
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc       531 May 17 20:38 boinc_task_state.xml
[2024-05-17 20:39:39] -rw------- 1 boinc boinc      1060 May 17 20:38 memory_monitor_summary.json
[2024-05-17 20:39:39] -rw------- 1 boinc boinc    367415 May 17 20:39 log.38776146._015052.job.log.tgz.1
[2024-05-17 20:39:39] -rw------- 1 boinc boinc        95 May 17 20:39 pilot_heartbeat.json
[2024-05-17 20:39:39] -rw------- 1 boinc boinc      7771 May 17 20:39 heartbeat.json
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc      8192 May 17 20:39 boinc_mmap_file
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc        27 May 17 20:39 wrapper_checkpoint.txt
[2024-05-17 20:39:39] -rw------- 1 boinc boinc      4405 May 17 20:39 pilotlog.txt
[2024-05-17 20:39:39] -rw------- 1 boinc boinc    533748 May 17 20:39 log.38776146._015052.job.log.1
[2024-05-17 20:39:39] -rw------- 1 boinc boinc       357 May 17 20:39 output.list
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc       620 May 17 20:39 runtime_log
[2024-05-17 20:39:39] -rw------- 1 boinc boinc    921600 May 17 20:39 result.tar.gz
[2024-05-17 20:39:39] -rw------- 1 boinc boinc       659 May 17 20:39 YjvKDmTpBS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmtjZKDmqFb5Eo.diag
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc     11286 May 17 20:39 runtime_log.err
[2024-05-17 20:39:39] -rw-r--r-- 1 boinc boinc     21837 May 17 20:39 stderr.txt
[2024-05-17 20:39:39] HITS file was successfully produced:
[2024-05-17 20:39:39] -rw------- 1 boinc boinc 273720630 May 17 20:38 shared/HITS.pool.root.1
[2024-05-17 20:39:39]  *** Contents of shared directory: ***
[2024-05-17 20:39:39] total 870940
[2024-05-17 20:39:39] -rw-r--r-- 2 boinc boinc 616685457 May 17 18:41 ATLAS.root_0
[2024-05-17 20:39:39] -rw-r--r-- 2 boinc boinc     17537 May 17 18:41 start_atlas.sh
[2024-05-17 20:39:39] -rw-r--r-- 2 boinc boinc    480001 May 17 18:41 input.tar.gz
[2024-05-17 20:39:39] -rw------- 1 boinc boinc 273720630 May 17 20:38 HITS.pool.root.1
[2024-05-17 20:39:39] -rw------- 1 boinc boinc    921600 May 17 20:39 result.tar.gz
20:39:41 (68017): run_atlas exited; CPU time 42475.811673
20:39:41 (68017): called boinc_finish(0)

</stderr_txt>
]]>

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