Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:50:59 (1789421): wrapper (7.7.26015): starting
09:50:59 (1789421): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 09:50:59] Arguments: --nthreads 4
[2024-05-20 09:50:59] Threads: 4
[2024-05-20 09:50:59] Checking for CVMFS
[2024-05-20 09:50:59] No cvmfs_config command found, will try listing directly
[2024-05-20 09:50:59] CVMFS is ok
[2024-05-20 09:50:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 09:50:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 09:50:59] Further information can be found at the LHC@home message board.
[2024-05-20 09:50:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 09:50:59] Checking for apptainer binary...
[2024-05-20 09:50:59] which: no apptainer in ((null))
[2024-05-20 09:50:59] apptainer is not installed, using version from CVMFS
[2024-05-20 09:50:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 09:51:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-20 09:51:00] apptainer works
[2024-05-20 09:51:00] Set ATHENA_PROC_NUMBER=4
[2024-05-20 09:51:00] Set ATHENA_CORE_NUMBER=4
[2024-05-20 09:51:00] Starting ATLAS job with PandaID=6208000530
[2024-05-20 09:51:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 17:48:22]  *** The last 200 lines of the pilot log: ***
[2024-05-20 17:48:22] 2024-05-20 15:48:00,933 | INFO     | model: linear, x: [1716191491.0, 1716191552.0, 1716191613.0, 1716191674.0, 1716191735.0, 1716191796.0, 1716191857.0, 1716191918.0, 1716191979.0, 1716192040.0, 1716
[2024-05-20 17:48:22] 2024-05-20 15:48:00,933 | INFO     | sum of square deviations: 31988581170.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,939 | INFO     | sum of deviations: 203512552532.99997
[2024-05-20 17:48:22] 2024-05-20 15:48:00,939 | INFO     | mean x: 1716205765.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,939 | INFO     | mean y: 2312828.8208955224
[2024-05-20 17:48:22] 2024-05-20 15:48:00,939 | INFO     | -- intersect: -10916252582.093822
[2024-05-20 17:48:22] 2024-05-20 15:48:00,939 | INFO     | intersect: -10916252582.093822
[2024-05-20 17:48:22] 2024-05-20 15:48:00,940 | INFO     | chi2: 4.600427675579035
[2024-05-20 17:48:22] 2024-05-20 15:48:00,940 | INFO     | model: linear, x: [1716191491.0, 1716191552.0, 1716191613.0, 1716191674.0, 1716191735.0, 1716191796.0, 1716191857.0, 1716191918.0, 1716191979.0, 1716192040.0, 1716
[2024-05-20 17:48:22] 2024-05-20 15:48:00,941 | INFO     | sum of square deviations: 30976357540.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,946 | INFO     | sum of deviations: 231355498062.99997
[2024-05-20 17:48:22] 2024-05-20 15:48:00,946 | INFO     | mean x: 1716205612.5
[2024-05-20 17:48:22] 2024-05-20 15:48:00,946 | INFO     | mean y: 2316983.8922413792
[2024-05-20 17:48:22] 2024-05-20 15:48:00,946 | INFO     | -- intersect: -12815639541.362066
[2024-05-20 17:48:22] 2024-05-20 15:48:00,946 | INFO     | intersect: -12815639541.362066
[2024-05-20 17:48:22] 2024-05-20 15:48:00,947 | INFO     | chi2: 3.77230977832502
[2024-05-20 17:48:22] 2024-05-20 15:48:00,947 | INFO     | current chi2=3.77230977832502 (change=18.000889387958562 %)
[2024-05-20 17:48:22] 2024-05-20 15:48:00,947 | INFO     | right removable region: 463
[2024-05-20 17:48:22] 2024-05-20 15:48:00,948 | INFO     | model: linear, x: [1716191796.0, 1716191857.0, 1716191918.0, 1716191979.0, 1716192040.0, 1716192101.0, 1716192162.0, 1716192223.0, 1716192284.0, 1716192345.0, 1716
[2024-05-20 17:48:22] 2024-05-20 15:48:00,948 | INFO     | sum of square deviations: 30976357540.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,953 | INFO     | sum of deviations: 95668667349.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,953 | INFO     | mean x: 1716205917.5
[2024-05-20 17:48:22] 2024-05-20 15:48:00,953 | INFO     | mean y: 2329055.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,953 | INFO     | -- intersect: -5298072479.030487
[2024-05-20 17:48:22] 2024-05-20 15:48:00,953 | INFO     | intersect: -5298072479.030487
[2024-05-20 17:48:22] 2024-05-20 15:48:00,954 | INFO     | chi2: 2.2669676186730046
[2024-05-20 17:48:22] 2024-05-20 15:48:00,954 | INFO     | current chi2=2.2669676186730046 (change=50.722676704450706 %)
[2024-05-20 17:48:22] 2024-05-20 15:48:00,955 | INFO     | model: linear, x: [1716192101.0, 1716192162.0, 1716192223.0, 1716192284.0, 1716192345.0, 1716192406.0, 1716192467.0, 1716192528.0, 1716192589.0, 1716192650.0, 1716
[2024-05-20 17:48:22] 2024-05-20 15:48:00,955 | INFO     | sum of square deviations: 29985715710.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,960 | INFO     | sum of deviations: 10070102223.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,960 | INFO     | mean x: 1716206070.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,960 | INFO     | mean y: 2342232.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,960 | INFO     | -- intersect: -574011213.3462973
[2024-05-20 17:48:22] 2024-05-20 15:48:00,960 | INFO     | intersect: -574011213.3462973
[2024-05-20 17:48:22] 2024-05-20 15:48:00,960 | INFO     | chi2: 0.9243177199993026
[2024-05-20 17:48:22] 2024-05-20 15:48:00,961 | INFO     | current chi2=0.9243177199993026 (change=59.22669065117204 %)
[2024-05-20 17:48:22] 2024-05-20 15:48:00,961 | INFO     | model: linear, x: [1716192406.0, 1716192467.0, 1716192528.0, 1716192589.0, 1716192650.0, 1716192711.0, 1716192772.0, 1716192833.0, 1716192894.0, 1716192955.0, 1716
[2024-05-20 17:48:22] 2024-05-20 15:48:00,961 | INFO     | sum of square deviations: 29016423117.5
[2024-05-20 17:48:22] 2024-05-20 15:48:00,966 | INFO     | sum of deviations: -2010132359.4999962
[2024-05-20 17:48:22] 2024-05-20 15:48:00,966 | INFO     | mean x: 1716206222.5
[2024-05-20 17:48:22] 2024-05-20 15:48:00,966 | INFO     | mean y: 2344124.0682819383
[2024-05-20 17:48:22] 2024-05-20 15:48:00,966 | INFO     | -- intersect: 121235472.2352413
[2024-05-20 17:48:22] 2024-05-20 15:48:00,966 | INFO     | intersect: 121235472.2352413
[2024-05-20 17:48:22] 2024-05-20 15:48:00,967 | INFO     | chi2: 0.8714802311366415
[2024-05-20 17:48:22] 2024-05-20 15:48:00,967 | INFO     | current chi2=0.8714802311366415 (change=5.71637735806914 %)
[2024-05-20 17:48:22] 2024-05-20 15:48:00,967 | INFO     | left removable region: 30
[2024-05-20 17:48:22] 2024-05-20 15:48:00,968 | INFO     | model: linear, x: [1716193321.0, 1716193382.0, 1716193443.0, 1716193504.0, 1716193565.0, 1716193626.0, 1716193687.0, 1716193748.0, 1716193809.0, 1716193870.0, 1716
[2024-05-20 17:48:22] 2024-05-20 15:48:00,968 | INFO     | sum of square deviations: 25173279432.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,972 | INFO     | sum of deviations: 25329545999.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,972 | INFO     | mean x: 1716206497.0
[2024-05-20 17:48:22] 2024-05-20 15:48:00,972 | INFO     | mean y: 2349050.0115473443
[2024-05-20 17:48:22] 2024-05-20 15:48:00,972 | INFO     | -- intersect: -1724511032.9971302
[2024-05-20 17:48:22] 2024-05-20 15:48:00,972 | INFO     | intersect: -1724511032.9971302
[2024-05-20 17:48:22] 2024-05-20 15:48:00,973 | INFO     | chi2: 0.002365499555467317
[2024-05-20 17:48:22] 2024-05-20 15:48:00,973 | INFO     | -- intersect: -1724511032.9971302
[2024-05-20 17:48:22] 2024-05-20 15:48:00,973 | INFO     | current memory leak: 1.01 B/s (using 433 data points, chi2=0.00)
[2024-05-20 17:48:22] 2024-05-20 15:48:00,973 | INFO     | ..............................
[2024-05-20 17:48:22] 2024-05-20 15:48:00,974 | INFO     | . Timing measurements:
[2024-05-20 17:48:22] 2024-05-20 15:48:00,974 | INFO     | . get job = 0 s
[2024-05-20 17:48:22] 2024-05-20 15:48:00,974 | INFO     | . initial setup = 1 s
[2024-05-20 17:48:22] 2024-05-20 15:48:00,974 | INFO     | . payload setup = 4 s
[2024-05-20 17:48:22] 2024-05-20 15:48:00,974 | INFO     | . stage-in = 0 s
[2024-05-20 17:48:22] 2024-05-20 15:48:00,974 | INFO     | . payload execution = 28583 s
[2024-05-20 17:48:22] 2024-05-20 15:48:00,974 | INFO     | . stage-out = 1 s
[2024-05-20 17:48:22] 2024-05-20 15:48:00,974 | INFO     | . log creation = 0 s
[2024-05-20 17:48:22] 2024-05-20 15:48:00,974 | INFO     | ..............................
[2024-05-20 17:48:22] 2024-05-20 15:48:01,087 | WARNING  | process 1801549 is no longer using CPU - aborting
[2024-05-20 17:48:22] 2024-05-20 15:48:01,087 | INFO     | aborting job monitoring since job object (job id=6208000530) has expired
[2024-05-20 17:48:22] 2024-05-20 15:48:01,244 | INFO     | 
[2024-05-20 17:48:22] 2024-05-20 15:48:01,244 | INFO     | job summary report
[2024-05-20 17:48:22] 2024-05-20 15:48:01,244 | INFO     | --------------------------------------------------
[2024-05-20 17:48:22] 2024-05-20 15:48:01,244 | INFO     | PanDA job id: 6208000530
[2024-05-20 17:48:22] 2024-05-20 15:48:01,244 | INFO     | task id: 38921013
[2024-05-20 17:48:22] 2024-05-20 15:48:01,244 | INFO     | errors: (none)
[2024-05-20 17:48:22] 2024-05-20 15:48:01,244 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 17:48:22] 2024-05-20 15:48:01,244 | INFO     | pilot state: finished 
[2024-05-20 17:48:22] 2024-05-20 15:48:01,244 | INFO     | transexitcode: 0
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | exeerrorcode: 0
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | exeerrordiag: 
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | exitcode: 0
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | exitmsg: OK
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | cpuconsumptiontime: 111386 s
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | nevents: 400
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | neventsw: 0
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | pid: 1801549
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | pgrp: 1801549
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | corecount: 4
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | event service: False
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | sizes: {0: 2392058, 1: 2392172, 4: 2392406, 11: 2392434, 28592: 2429921, 28593: 2438903, 28594: 2439087, 28599: 2439257}
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | --------------------------------------------------
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | 
[2024-05-20 17:48:22] 2024-05-20 15:48:01,245 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2024-05-20 17:48:22] 2024-05-20 15:48:01,276 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,276 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,277 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,277 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,277 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,277 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,277 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,277 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,278 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 17:48:22] 2024-05-20 15:48:01,279 | INFO     | job 6208000530 has completed (purged errors)
[2024-05-20 17:48:22] 2024-05-20 15:48:01,279 | INFO     | overall cleanup function is called
[2024-05-20 17:48:22] 2024-05-20 15:48:02,287 | INFO     | --- collectZombieJob: --- 10, [1801549]
[2024-05-20 17:48:22] 2024-05-20 15:48:02,288 | INFO     | zombie collector waiting for pid 1801549
[2024-05-20 17:48:22] 2024-05-20 15:48:02,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 17:48:22] 2024-05-20 15:48:03,293 | INFO     | collected zombie processes
[2024-05-20 17:48:22] 2024-05-20 15:48:03,293 | INFO     | will now attempt to kill all subprocesses of pid=1801549
[2024-05-20 17:48:22] 2024-05-20 15:48:03,492 | INFO     | process IDs to be killed: [1801549] (in reverse order)
[2024-05-20 17:48:22] 2024-05-20 15:48:03,606 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 17:48:22] 2024-05-20 15:48:03,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 17:48:22] 2024-05-20 15:48:03,615 | INFO     | did not find any defunct processes belonging to 1801549
[2024-05-20 17:48:22] 2024-05-20 15:48:03,622 | INFO     | did not find any defunct processes belonging to 1801549
[2024-05-20 17:48:22] 2024-05-20 15:48:03,622 | INFO     | ready for new job
[2024-05-20 17:48:22] 2024-05-20 15:48:03,623 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 17:48:22] 2024-05-20 15:48:03,625 | INFO     | *************************************
[2024-05-20 17:48:22] 2024-05-20 15:48:03,625 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 17:48:22] 2024-05-20 15:48:03,625 | INFO     | *************************************
[2024-05-20 17:48:22] 2024-05-20 15:48:03,625 | INFO     | 
[2024-05-20 17:48:22] 2024-05-20 15:48:03,629 | INFO     | architecture information:
[2024-05-20 17:48:22] 2024-05-20 15:48:03,629 | INFO     | executing command: cat /etc/os-release
[2024-05-20 17:48:22] 2024-05-20 15:48:03,652 | INFO     | cat /etc/os-release:
[2024-05-20 17:48:22] NAME="CentOS Linux"
[2024-05-20 17:48:22] VERSION="7 (Core)"
[2024-05-20 17:48:22] ID="centos"
[2024-05-20 17:48:22] ID_LIKE="rhel fedora"
[2024-05-20 17:48:22] VERSION_ID="7"
[2024-05-20 17:48:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 17:48:22] ANSI_COLOR="0;31"
[2024-05-20 17:48:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 17:48:22] HOME_URL="https://www.centos.org/"
[2024-05-20 17:48:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 17:48:22] 
[2024-05-20 17:48:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 17:48:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 17:48:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 17:48:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 17:48:22] 
[2024-05-20 17:48:22] 2024-05-20 15:48:03,653 | INFO     | *************************************
[2024-05-20 17:48:22] 2024-05-20 15:48:04,156 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2024-05-20 17:48:22] 2024-05-20 15:48:04,183 | INFO     | sufficient remaining disk space (586329096192 B)
[2024-05-20 17:48:22] 2024-05-20 15:48:04,183 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 17:48:22] 2024-05-20 15:48:04,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 17:48:22] 2024-05-20 15:48:04,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 17:48:22] 2024-05-20 15:48:04,184 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 17:48:22] 2024-05-20 15:48:04,185 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 17:48:22] 2024-05-20 15:48:04,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 17:48:22] 2024-05-20 15:48:04,185 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 17:48:22] 2024-05-20 15:48:04,373 | INFO     | all payload control threads have been joined
[2024-05-20 17:48:22] 2024-05-20 15:48:04,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 17:48:22] 2024-05-20 15:48:04,596 | INFO     | aborting loop
[2024-05-20 17:48:22] 2024-05-20 15:48:04,675 | INFO     | all data control threads have been joined
[2024-05-20 17:48:22] 2024-05-20 15:48:04,771 | INFO     | all job control threads have been joined
[2024-05-20 17:48:22] 2024-05-20 15:48:05,189 | INFO     | [job] retrieve thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:05,195 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:05,254 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:05,378 | INFO     | [payload] control thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:05,601 | INFO     | [job] job monitor thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:05,606 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:05,659 | INFO     | [payload] failed_post thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:05,681 | INFO     | [data] control thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:05,776 | INFO     | [job] control thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:05,850 | INFO     | [data] copytool_in thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:06,049 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 17:48:22] 2024-05-20 15:48:06,189 | INFO     | [data] copytool_out thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:06,278 | INFO     | [payload] validate_post thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:06,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 17:48:22] 2024-05-20 15:48:06,638 | INFO     | [job] validate thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:07,055 | INFO     | [job] queue monitor thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:10,309 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:14,671 | INFO     | job.realtimelogging is not enabled
[2024-05-20 17:48:22] 2024-05-20 15:48:15,675 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 17:48:22] 2024-05-20 15:48:16,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47948332360768)>', '<ExcThread(monitor, started 47948507813632)>']
[2024-05-20 17:48:22] 2024-05-20 15:48:17,248 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 17:48:22] 2024-05-20 15:48:17,248 | INFO     | [monitor] control thread has ended
[2024-05-20 17:48:22] 2024-05-20 15:48:21,620 | INFO     | all workflow threads have been joined
[2024-05-20 17:48:22] 2024-05-20 15:48:21,620 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 17:48:22] 2024-05-20 15:48:21,620 | INFO     | traces error code: 0
[2024-05-20 17:48:22] 2024-05-20 15:48:21,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 17:48:22] 2024-05-20 15:48:21,722 [wrapper] ==== pilot stdout END ====
[2024-05-20 17:48:22] 2024-05-20 15:48:21,726 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 17:48:22] 2024-05-20 15:48:21,729 [wrapper] pilotpid: 1793962
[2024-05-20 17:48:22] 2024-05-20 15:48:21,732 [wrapper] Pilot exit status: 0
[2024-05-20 17:48:22] 2024-05-20 15:48:21,742 [wrapper] pandaids: 6208000530
[2024-05-20 17:48:22] 2024-05-20 15:48:21,819 [wrapper] cleanup: SIGTERM to supervisor_pilot 2971599 1793963
[2024-05-20 17:48:22] 2024-05-20 15:48:21,823 [wrapper] Test setup, not cleaning
[2024-05-20 17:48:22] 2024-05-20 15:48:21,826 [wrapper] ==== wrapper stdout END ====
[2024-05-20 17:48:22] 2024-05-20 15:48:21,830 [wrapper] ==== wrapper stderr END ====
[2024-05-20 17:48:22] 2024-05-20 15:48:21,836 [wrapper] apfmon messages muted
[2024-05-20 17:48:22]  *** Error codes and diagnostics ***
[2024-05-20 17:48:22]     "exeErrorCode": 0,
[2024-05-20 17:48:22]     "exeErrorDiag": "",
[2024-05-20 17:48:22]     "pilotErrorCode": 0,
[2024-05-20 17:48:22]     "pilotErrorDiag": "",
[2024-05-20 17:48:22]  *** Listing of results directory ***
[2024-05-20 17:48:22] total 874612
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc      5633 May 17 13:29 queuedata.json
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc    467845 May 17 13:29 pilot3.tar.gz
[2024-05-20 17:48:22] -rwx------ 1 boinc boinc     32251 May 17 13:31 runpilot2-wrapper.sh
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc       100 May 20 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 17:48:22] -rwxr-xr-x 1 boinc boinc      7986 May 20 09:50 run_atlas
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc       105 May 20 09:50 job.xml
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc      6663 May 20 09:50 init_data.xml
[2024-05-20 17:48:22] -rw-r--r-- 2 boinc boinc 543597845 May 20 09:50 EVNT.38776210._000082.pool.root.1
[2024-05-20 17:48:22] -rw-r--r-- 2 boinc boinc     17537 May 20 09:50 start_atlas.sh
[2024-05-20 17:48:22] drwxrwx--x 2 boinc boinc      4096 May 20 09:50 shared
[2024-05-20 17:48:22] -rw-r--r-- 2 boinc boinc    480005 May 20 09:50 input.tar.gz
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc         0 May 20 09:50 boinc_lockfile
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc      2643 May 20 09:51 pandaJob.out
[2024-05-20 17:48:22] -rw------- 1 boinc boinc       424 May 20 09:51 setup.sh.local
[2024-05-20 17:48:22] -rw------- 1 boinc boinc   1013883 May 20 09:51 agis_schedconf.cvmfs.json
[2024-05-20 17:48:22] -rw------- 1 boinc boinc   1324701 May 20 09:51 cric_ddmendpoints.json
[2024-05-20 17:48:22] drwx------ 4 boinc boinc      4096 May 20 09:51 pilot3
[2024-05-20 17:48:22] -rw------- 1 boinc boinc 340131955 May 20 17:47 HITS.38921013._001856.pool.root.1
[2024-05-20 17:48:22] -rw------- 1 boinc boinc        95 May 20 17:47 pilot_heartbeat.json
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc       533 May 20 17:47 boinc_task_state.xml
[2024-05-20 17:48:22] -rw------- 1 boinc boinc      1051 May 20 17:47 memory_monitor_summary.json
[2024-05-20 17:48:22] -rw------- 1 boinc boinc         0 May 20 17:47 agis_ddmendpoints.agis.ALL.json
[2024-05-20 17:48:22] -rw------- 1 boinc boinc    510075 May 20 17:47 log.38921013._001856.job.log.tgz.1
[2024-05-20 17:48:22] -rw------- 1 boinc boinc      7767 May 20 17:48 heartbeat.json
[2024-05-20 17:48:22] -rw------- 1 boinc boinc      4416 May 20 17:48 pilotlog.txt
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc        29 May 20 17:48 wrapper_checkpoint.txt
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc      8192 May 20 17:48 boinc_mmap_file
[2024-05-20 17:48:22] -rw------- 1 boinc boinc   3658932 May 20 17:48 log.38921013._001856.job.log.1
[2024-05-20 17:48:22] -rw------- 1 boinc boinc       357 May 20 17:48 output.list
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc       620 May 20 17:48 runtime_log
[2024-05-20 17:48:22] -rw------- 1 boinc boinc   4188160 May 20 17:48 result.tar.gz
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc     11410 May 20 17:48 runtime_log.err
[2024-05-20 17:48:22] -rw------- 1 boinc boinc       660 May 20 17:48 XFJKDmazAS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmVALKDmxYxsZm.diag
[2024-05-20 17:48:22] -rw-r--r-- 1 boinc boinc     21385 May 20 17:48 stderr.txt
[2024-05-20 17:48:22] HITS file was successfully produced:
[2024-05-20 17:48:22] -rw------- 1 boinc boinc 340131955 May 20 17:47 shared/HITS.pool.root.1
[2024-05-20 17:48:22]  *** Contents of shared directory: ***
[2024-05-20 17:48:22] total 867616
[2024-05-20 17:48:22] -rw-r--r-- 2 boinc boinc 543597845 May 20 09:50 ATLAS.root_0
[2024-05-20 17:48:22] -rw-r--r-- 2 boinc boinc     17537 May 20 09:50 start_atlas.sh
[2024-05-20 17:48:22] -rw-r--r-- 2 boinc boinc    480005 May 20 09:50 input.tar.gz
[2024-05-20 17:48:22] -rw------- 1 boinc boinc 340131955 May 20 17:47 HITS.pool.root.1
[2024-05-20 17:48:22] -rw------- 1 boinc boinc   4188160 May 20 17:48 result.tar.gz
17:48:23 (1789421): run_atlas exited; CPU time 110652.180991
17:48:23 (1789421): called boinc_finish(0)

</stderr_txt>
]]>

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