Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:40:17 (2742046): wrapper (7.7.26015): starting
22:40:17 (2742046): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 22:40:17] Arguments: --nthreads 4
[2024-05-23 22:40:17] Threads: 4
[2024-05-23 22:40:17] Checking for CVMFS
[2024-05-23 22:40:17] No cvmfs_config command found, will try listing directly
[2024-05-23 22:40:18] CVMFS is ok
[2024-05-23 22:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 22:40:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 22:40:18] Further information can be found at the LHC@home message board.
[2024-05-23 22:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 22:40:18] Checking for apptainer binary...
[2024-05-23 22:40:18] which: no apptainer in ((null))
[2024-05-23 22:40:18] apptainer is not installed, using version from CVMFS
[2024-05-23 22:40:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 22:40:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-23 22:40:19] apptainer works
[2024-05-23 22:40:19] Set ATHENA_PROC_NUMBER=4
[2024-05-23 22:40:19] Set ATHENA_CORE_NUMBER=4
[2024-05-23 22:40:19] Starting ATLAS job with PandaID=6207918582
[2024-05-23 22:40:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-24 04:48:26]  *** The last 200 lines of the pilot log: ***
[2024-05-24 04:48:26] 2024-05-24 02:48:00,299 | INFO     | chi2: 0.04933955732896012
[2024-05-24 04:48:26] 2024-05-24 02:48:00,299 | INFO     | current chi2=0.04933955732896012 (change=96.53928654281104 %)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,300 | INFO     | model: linear, x: [1716497765.0, 1716497826.0, 1716497887.0, 1716497948.0, 1716498009.0, 1716498070.0, 1716498131.0, 1716498192.0, 1716498253.0, 1716498314.0, 1716
[2024-05-24 04:48:26] 2024-05-24 02:48:00,300 | INFO     | sum of square deviations: 12844082682.5
[2024-05-24 04:48:26] 2024-05-24 02:48:00,303 | INFO     | sum of deviations: 20439842698.5
[2024-05-24 04:48:26] 2024-05-24 02:48:00,303 | INFO     | mean x: 1716508287.5
[2024-05-24 04:48:26] 2024-05-24 02:48:00,303 | INFO     | mean y: 2361261.7485549133
[2024-05-24 04:48:26] 2024-05-24 02:48:00,303 | INFO     | -- intersect: -2729259224.856921
[2024-05-24 04:48:26] 2024-05-24 02:48:00,303 | INFO     | intersect: -2729259224.856921
[2024-05-24 04:48:26] 2024-05-24 02:48:00,304 | INFO     | chi2: 0.010894583888630642
[2024-05-24 04:48:26] 2024-05-24 02:48:00,304 | INFO     | current chi2=0.010894583888630642 (change=77.9191697728589 %)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,304 | INFO     | model: linear, x: [1716498070.0, 1716498131.0, 1716498192.0, 1716498253.0, 1716498314.0, 1716498375.0, 1716498436.0, 1716498497.0, 1716498558.0, 1716498619.0, 1716
[2024-05-24 04:48:26] 2024-05-24 02:48:00,305 | INFO     | sum of square deviations: 12295263090.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,307 | INFO     | sum of deviations: 23457031317.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,308 | INFO     | mean x: 1716508440.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,308 | INFO     | mean y: 2360421.8944281526
[2024-05-24 04:48:26] 2024-05-24 02:48:00,308 | INFO     | -- intersect: -3272412304.662561
[2024-05-24 04:48:26] 2024-05-24 02:48:00,308 | INFO     | intersect: -3272412304.662561
[2024-05-24 04:48:26] 2024-05-24 02:48:00,308 | INFO     | chi2: 0.005491966356191552
[2024-05-24 04:48:26] 2024-05-24 02:48:00,308 | INFO     | current chi2=0.005491966356191552 (change=49.58993925483605 %)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,309 | INFO     | model: linear, x: [1716498375.0, 1716498436.0, 1716498497.0, 1716498558.0, 1716498619.0, 1716498680.0, 1716498741.0, 1716498802.0, 1716498863.0, 1716498924.0, 1716
[2024-05-24 04:48:26] 2024-05-24 02:48:00,309 | INFO     | sum of square deviations: 11762304260.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,312 | INFO     | sum of deviations: 21794431512.500004
[2024-05-24 04:48:26] 2024-05-24 02:48:00,312 | INFO     | mean x: 1716508592.5
[2024-05-24 04:48:26] 2024-05-24 02:48:00,312 | INFO     | mean y: 2360901.6160714286
[2024-05-24 04:48:26] 2024-05-24 02:48:00,312 | INFO     | -- intersect: -3178166326.121109
[2024-05-24 04:48:26] 2024-05-24 02:48:00,312 | INFO     | intersect: -3178166326.121109
[2024-05-24 04:48:26] 2024-05-24 02:48:00,313 | INFO     | chi2: 0.0029420100376660245
[2024-05-24 04:48:26] 2024-05-24 02:48:00,313 | INFO     | current chi2=0.0029420100376660245 (change=46.430661681871904 %)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,313 | INFO     | model: linear, x: [1716498680.0, 1716498741.0, 1716498802.0, 1716498863.0, 1716498924.0, 1716498985.0, 1716499046.0, 1716499107.0, 1716499168.0, 1716499229.0, 1716
[2024-05-24 04:48:26] 2024-05-24 02:48:00,313 | INFO     | sum of square deviations: 11244973630.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,316 | INFO     | sum of deviations: 19380661116.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,316 | INFO     | mean x: 1716508745.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,316 | INFO     | mean y: 2361612.5679758308
[2024-05-24 04:48:26] 2024-05-24 02:48:00,316 | INFO     | -- intersect: -2956033434.330454
[2024-05-24 04:48:26] 2024-05-24 02:48:00,316 | INFO     | intersect: -2956033434.330454
[2024-05-24 04:48:26] 2024-05-24 02:48:00,317 | INFO     | chi2: 0.002141285071981105
[2024-05-24 04:48:26] 2024-05-24 02:48:00,317 | INFO     | current chi2=0.002141285071981105 (change=27.216935205297816 %)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,317 | INFO     | model: linear, x: [1716498985.0, 1716499046.0, 1716499107.0, 1716499168.0, 1716499229.0, 1716499290.0, 1716499351.0, 1716499412.0, 1716499473.0, 1716499534.0, 1716
[2024-05-24 04:48:26] 2024-05-24 02:48:00,318 | INFO     | sum of square deviations: 10743038637.5
[2024-05-24 04:48:26] 2024-05-24 02:48:00,320 | INFO     | sum of deviations: 17544097485.499996
[2024-05-24 04:48:26] 2024-05-24 02:48:00,320 | INFO     | mean x: 1716508897.5
[2024-05-24 04:48:26] 2024-05-24 02:48:00,321 | INFO     | mean y: 2362170.3773006136
[2024-05-24 04:48:26] 2024-05-24 02:48:00,321 | INFO     | -- intersect: -2800811163.4082747
[2024-05-24 04:48:26] 2024-05-24 02:48:00,321 | INFO     | intersect: -2800811163.4082747
[2024-05-24 04:48:26] 2024-05-24 02:48:00,321 | INFO     | chi2: 0.0017822113868610897
[2024-05-24 04:48:26] 2024-05-24 02:48:00,321 | INFO     | current chi2=0.0017822113868610897 (change=16.769074319833656 %)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,321 | INFO     | left removable region: 70
[2024-05-24 04:48:26] 2024-05-24 02:48:00,322 | INFO     | model: linear, x: [1716501120.0, 1716501181.0, 1716501242.0, 1716501303.0, 1716501364.0, 1716501425.0, 1716501486.0, 1716501547.0, 1716501608.0, 1716501669.0, 1716
[2024-05-24 04:48:26] 2024-05-24 02:48:00,322 | INFO     | sum of square deviations: 7178069470.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,324 | INFO     | sum of deviations: 8823495304.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,324 | INFO     | mean x: 1716509782.0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,324 | INFO     | mean y: 2364862.154385965
[2024-05-24 04:48:26] 2024-05-24 02:48:00,324 | INFO     | -- intersect: -2107619732.456547
[2024-05-24 04:48:26] 2024-05-24 02:48:00,325 | INFO     | intersect: -2107619732.456547
[2024-05-24 04:48:26] 2024-05-24 02:48:00,325 | INFO     | chi2: 0.0007480366489996584
[2024-05-24 04:48:26] 2024-05-24 02:48:00,325 | INFO     | -- intersect: -2107619732.456547
[2024-05-24 04:48:26] 2024-05-24 02:48:00,325 | INFO     | current memory leak: 1.23 B/s (using 285 data points, chi2=0.00)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,326 | INFO     | ..............................
[2024-05-24 04:48:26] 2024-05-24 02:48:00,326 | INFO     | . Timing measurements:
[2024-05-24 04:48:26] 2024-05-24 02:48:00,326 | INFO     | . get job = 0 s
[2024-05-24 04:48:26] 2024-05-24 02:48:00,326 | INFO     | . initial setup = 1 s
[2024-05-24 04:48:26] 2024-05-24 02:48:00,326 | INFO     | . payload setup = 4 s
[2024-05-24 04:48:26] 2024-05-24 02:48:00,326 | INFO     | . stage-in = 0 s
[2024-05-24 04:48:26] 2024-05-24 02:48:00,326 | INFO     | . payload execution = 22020 s
[2024-05-24 04:48:26] 2024-05-24 02:48:00,326 | INFO     | . stage-out = 0 s
[2024-05-24 04:48:26] 2024-05-24 02:48:00,326 | INFO     | . log creation = 0 s
[2024-05-24 04:48:26] 2024-05-24 02:48:00,327 | INFO     | ..............................
[2024-05-24 04:48:26] 2024-05-24 02:48:00,789 | INFO     | 
[2024-05-24 04:48:26] 2024-05-24 02:48:00,789 | INFO     | job summary report
[2024-05-24 04:48:26] 2024-05-24 02:48:00,789 | INFO     | --------------------------------------------------
[2024-05-24 04:48:26] 2024-05-24 02:48:00,789 | INFO     | PanDA job id: 6207918582
[2024-05-24 04:48:26] 2024-05-24 02:48:00,789 | INFO     | task id: 38920987
[2024-05-24 04:48:26] 2024-05-24 02:48:00,789 | INFO     | errors: (none)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,789 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-24 04:48:26] 2024-05-24 02:48:00,789 | INFO     | pilot state: finished 
[2024-05-24 04:48:26] 2024-05-24 02:48:00,789 | INFO     | transexitcode: 0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | exeerrorcode: 0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | exeerrordiag: 
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | exitcode: 0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | exitmsg: OK
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | cpuconsumptiontime: 84985 s
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | nevents: 400
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | neventsw: 0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | pid: 2753609
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | pgrp: 2753609
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | corecount: 4
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | event service: False
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | sizes: {0: 2378663, 1: 2378663, 4: 2378897, 11: 2378925, 22028: 2413264, 22030: 2422430, 22039: 2422544}
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | --------------------------------------------------
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | 
[2024-05-24 04:48:26] 2024-05-24 02:48:00,790 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2024-05-24 04:48:26] 2024-05-24 02:48:00,810 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,810 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,812 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,812 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-24 04:48:26] 2024-05-24 02:48:00,812 | INFO     | job 6207918582 has completed (purged errors)
[2024-05-24 04:48:26] 2024-05-24 02:48:00,812 | INFO     | overall cleanup function is called
[2024-05-24 04:48:26] 2024-05-24 02:48:01,819 | INFO     | --- collectZombieJob: --- 10, [2753609]
[2024-05-24 04:48:26] 2024-05-24 02:48:01,819 | INFO     | zombie collector waiting for pid 2753609
[2024-05-24 04:48:26] 2024-05-24 02:48:01,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-24 04:48:26] 2024-05-24 02:48:02,824 | INFO     | collected zombie processes
[2024-05-24 04:48:26] 2024-05-24 02:48:02,824 | INFO     | will now attempt to kill all subprocesses of pid=2753609
[2024-05-24 04:48:26] 2024-05-24 02:48:03,024 | INFO     | process IDs to be killed: [2753609] (in reverse order)
[2024-05-24 04:48:26] 2024-05-24 02:48:03,132 | WARNING  | found no corresponding commands to process id(s)
[2024-05-24 04:48:26] 2024-05-24 02:48:03,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-24 04:48:26] 2024-05-24 02:48:03,142 | INFO     | did not find any defunct processes belonging to 2753609
[2024-05-24 04:48:26] 2024-05-24 02:48:03,150 | INFO     | did not find any defunct processes belonging to 2753609
[2024-05-24 04:48:26] 2024-05-24 02:48:03,150 | INFO     | ready for new job
[2024-05-24 04:48:26] 2024-05-24 02:48:03,150 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-24 04:48:26] 2024-05-24 02:48:03,152 | INFO     | *************************************
[2024-05-24 04:48:26] 2024-05-24 02:48:03,153 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-24 04:48:26] 2024-05-24 02:48:03,153 | INFO     | *************************************
[2024-05-24 04:48:26] 2024-05-24 02:48:03,153 | INFO     | 
[2024-05-24 04:48:26] 2024-05-24 02:48:03,156 | INFO     | architecture information:
[2024-05-24 04:48:26] 2024-05-24 02:48:03,156 | INFO     | executing command: cat /etc/os-release
[2024-05-24 04:48:26] 2024-05-24 02:48:03,173 | INFO     | cat /etc/os-release:
[2024-05-24 04:48:26] NAME="CentOS Linux"
[2024-05-24 04:48:26] VERSION="7 (Core)"
[2024-05-24 04:48:26] ID="centos"
[2024-05-24 04:48:26] ID_LIKE="rhel fedora"
[2024-05-24 04:48:26] VERSION_ID="7"
[2024-05-24 04:48:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-24 04:48:26] ANSI_COLOR="0;31"
[2024-05-24 04:48:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-24 04:48:26] HOME_URL="https://www.centos.org/"
[2024-05-24 04:48:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-24 04:48:26] 
[2024-05-24 04:48:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-24 04:48:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-24 04:48:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-24 04:48:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-24 04:48:26] 
[2024-05-24 04:48:26] 2024-05-24 02:48:03,173 | INFO     | *************************************
[2024-05-24 04:48:26] 2024-05-24 02:48:03,676 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2024-05-24 04:48:26] 2024-05-24 02:48:03,699 | INFO     | sufficient remaining disk space (621796130816 B)
[2024-05-24 04:48:26] 2024-05-24 02:48:03,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-24 04:48:26] 2024-05-24 02:48:03,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-24 04:48:26] 2024-05-24 02:48:03,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-24 04:48:26] 2024-05-24 02:48:03,700 | INFO     | aborting loop
[2024-05-24 04:48:26] 2024-05-24 02:48:03,700 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-24 04:48:26] 2024-05-24 02:48:03,701 | INFO     | found 0 job(s) in 20 queues
[2024-05-24 04:48:26] 2024-05-24 02:48:03,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-24 04:48:26] 2024-05-24 02:48:03,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-24 04:48:26] 2024-05-24 02:48:03,783 | INFO     | all data control threads have been joined
[2024-05-24 04:48:26] 2024-05-24 02:48:04,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-24 04:48:26] 2024-05-24 02:48:04,361 | INFO     | all payload control threads have been joined
[2024-05-24 04:48:26] 2024-05-24 02:48:04,390 | INFO     | all job control threads have been joined
[2024-05-24 04:48:26] 2024-05-24 02:48:04,705 | INFO     | [job] retrieve thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:04,706 | INFO     | [job] job monitor thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:04,788 | INFO     | [data] control thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:04,918 | INFO     | [payload] validate_pre thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:05,128 | INFO     | [job] create_data_payload thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:05,129 | INFO     | [job] validate thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:05,143 | INFO     | [payload] execute_payloads thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:05,366 | INFO     | [payload] control thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:05,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-24 04:48:26] 2024-05-24 02:48:05,396 | INFO     | [job] control thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:05,549 | INFO     | [data] copytool_in thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:06,013 | INFO     | [data] copytool_out thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:06,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-24 04:48:26] 2024-05-24 02:48:06,080 | INFO     | [payload] failed_post thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:06,195 | INFO     | [payload] validate_post thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:06,397 | INFO     | [job] queue monitor thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:10,068 | INFO     | [data] queue_monitor thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:13,801 | INFO     | job.realtimelogging is not enabled
[2024-05-24 04:48:26] 2024-05-24 02:48:14,806 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-24 04:48:26] 2024-05-24 02:48:16,429 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47929064039488)>', '<ExcThread(monitor, started 47929237391104)>']
[2024-05-24 04:48:26] 2024-05-24 02:48:16,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-24 04:48:26] 2024-05-24 02:48:16,758 | INFO     | [monitor] control thread has ended
[2024-05-24 04:48:26] 2024-05-24 02:48:21,454 | INFO     | all workflow threads have been joined
[2024-05-24 04:48:26] 2024-05-24 02:48:21,454 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-24 04:48:26] 2024-05-24 02:48:21,454 | INFO     | traces error code: 0
[2024-05-24 04:48:26] 2024-05-24 02:48:21,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-24 04:48:26] 2024-05-24 02:48:21,532 [wrapper] ==== pilot stdout END ====
[2024-05-24 04:48:26] 2024-05-24 02:48:21,534 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-24 04:48:26] 2024-05-24 02:48:21,549 [wrapper] pilotpid: 2746484
[2024-05-24 04:48:26] 2024-05-24 02:48:21,551 [wrapper] Pilot exit status: 0
[2024-05-24 04:48:26] 2024-05-24 02:48:21,599 [wrapper] pandaids: 6207918582
[2024-05-24 04:48:26] 2024-05-24 02:48:21,684 [wrapper] cleanup: SIGTERM to supervisor_pilot 3832350 2746485
[2024-05-24 04:48:26] 2024-05-24 02:48:21,687 [wrapper] Test setup, not cleaning
[2024-05-24 04:48:26] 2024-05-24 02:48:21,689 [wrapper] ==== wrapper stdout END ====
[2024-05-24 04:48:26] 2024-05-24 02:48:21,692 [wrapper] ==== wrapper stderr END ====
[2024-05-24 04:48:26] 2024-05-24 02:48:21,695 [wrapper] apfmon messages muted
[2024-05-24 04:48:26]  *** Error codes and diagnostics ***
[2024-05-24 04:48:26]     "exeErrorCode": 0,
[2024-05-24 04:48:26]     "exeErrorDiag": "",
[2024-05-24 04:48:26]     "pilotErrorCode": 0,
[2024-05-24 04:48:26]     "pilotErrorDiag": "",
[2024-05-24 04:48:26]  *** Listing of results directory ***
[2024-05-24 04:48:26] total 959424
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc    467845 May 17 11:57 pilot3.tar.gz
[2024-05-24 04:48:26] -rwx------ 1 boinc boinc     32251 May 17 12:06 runpilot2-wrapper.sh
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc      5633 May 17 12:06 queuedata.json
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc       100 May 23 22:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-24 04:48:26] -rwxr-xr-x 1 boinc boinc      7986 May 23 22:40 run_atlas
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc       105 May 23 22:40 job.xml
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc      6663 May 23 22:40 init_data.xml
[2024-05-24 04:48:26] -rw-r--r-- 2 boinc boinc 638994359 May 23 22:40 EVNT.38776170._000145.pool.root.1
[2024-05-24 04:48:26] -rw-r--r-- 2 boinc boinc     17537 May 23 22:40 start_atlas.sh
[2024-05-24 04:48:26] drwxrwx--x 2 boinc boinc      4096 May 23 22:40 shared
[2024-05-24 04:48:26] -rw-r--r-- 2 boinc boinc    479995 May 23 22:40 input.tar.gz
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc         0 May 23 22:40 boinc_lockfile
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc      2615 May 23 22:40 pandaJob.out
[2024-05-24 04:48:26] -rw------- 1 boinc boinc       424 May 23 22:40 setup.sh.local
[2024-05-24 04:48:26] -rw------- 1 boinc boinc   1009195 May 23 22:40 agis_schedconf.cvmfs.json
[2024-05-24 04:48:26] -rw------- 1 boinc boinc   1317222 May 23 22:40 cric_ddmendpoints.json
[2024-05-24 04:48:26] drwx------ 4 boinc boinc      4096 May 23 22:40 pilot3
[2024-05-24 04:48:26] -rw------- 1 boinc boinc 333691019 May 24 04:47 HITS.38920987._003777.pool.root.1
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc       532 May 24 04:47 boinc_task_state.xml
[2024-05-24 04:48:26] -rw------- 1 boinc boinc        95 May 24 04:47 pilot_heartbeat.json
[2024-05-24 04:48:26] -rw------- 1 boinc boinc      1051 May 24 04:47 memory_monitor_summary.json
[2024-05-24 04:48:26] -rw------- 1 boinc boinc         0 May 24 04:47 agis_ddmendpoints.agis.ALL.json
[2024-05-24 04:48:26] -rw------- 1 boinc boinc    431711 May 24 04:47 log.38920987._003777.job.log.tgz.1
[2024-05-24 04:48:26] -rw------- 1 boinc boinc      7767 May 24 04:48 heartbeat.json
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc        28 May 24 04:48 wrapper_checkpoint.txt
[2024-05-24 04:48:26] -rw------- 1 boinc boinc      4416 May 24 04:48 pilotlog.txt
[2024-05-24 04:48:26] -rw------- 1 boinc boinc   2688988 May 24 04:48 log.38920987._003777.job.log.1
[2024-05-24 04:48:26] -rw------- 1 boinc boinc       357 May 24 04:48 output.list
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc       620 May 24 04:48 runtime_log
[2024-05-24 04:48:26] -rw------- 1 boinc boinc   3143680 May 24 04:48 result.tar.gz
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc     11410 May 24 04:48 runtime_log.err
[2024-05-24 04:48:26] -rw------- 1 boinc boinc       657 May 24 04:48 KKzLDmAf9R5nsSi4apGgGQJmABFKDmABFKDm4ySLDm6sQKDmOJiFcn.diag
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc      8192 May 24 04:48 boinc_mmap_file
[2024-05-24 04:48:26] -rw-r--r-- 1 boinc boinc     21403 May 24 04:48 stderr.txt
[2024-05-24 04:48:26] HITS file was successfully produced:
[2024-05-24 04:48:26] -rw------- 1 boinc boinc 333691019 May 24 04:47 shared/HITS.pool.root.1
[2024-05-24 04:48:26]  *** Contents of shared directory: ***
[2024-05-24 04:48:26] total 953464
[2024-05-24 04:48:26] -rw-r--r-- 2 boinc boinc 638994359 May 23 22:40 ATLAS.root_0
[2024-05-24 04:48:26] -rw-r--r-- 2 boinc boinc     17537 May 23 22:40 start_atlas.sh
[2024-05-24 04:48:26] -rw-r--r-- 2 boinc boinc    479995 May 23 22:40 input.tar.gz
[2024-05-24 04:48:26] -rw------- 1 boinc boinc 333691019 May 24 04:47 HITS.pool.root.1
[2024-05-24 04:48:26] -rw------- 1 boinc boinc   3143680 May 24 04:48 result.tar.gz
04:48:28 (2742046): run_atlas exited; CPU time 84525.524367
04:48:28 (2742046): called boinc_finish(0)

</stderr_txt>
]]>

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