Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
16:21:58 (234777): wrapper (7.7.26015): starting
16:21:58 (234777): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 16:21:58] Arguments: --nthreads 12
[2024-05-17 16:21:58] Threads: 12
[2024-05-17 16:21:58] Checking for CVMFS
[2024-05-17 16:21:59] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 16:21:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 16:21:59] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 16:22:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 16:22:00] 2.10.1.0 70285 184133 162964 132859 0 59 23491521 45568001 5104 130560 0 617902468 99.754 409816730 3828 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 16:22:00] CVMFS is ok
[2024-05-17 16:22:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 16:22:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 16:22:00] Further information can be found at the LHC@home message board.
[2024-05-17 16:22:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 16:22:00] Checking for apptainer binary...
[2024-05-17 16:22:00] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 16:22:00] Running /usr/bin/apptainer --version
[2024-05-17 16:22:00] apptainer version 1.1.8-1.el7
[2024-05-17 16:22:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 16:22:01] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0055.triumf.lcg
[2024-05-17 16:22:01] apptainer works
[2024-05-17 16:22:01] Set ATHENA_PROC_NUMBER=12
[2024-05-17 16:22:01] Set ATHENA_CORE_NUMBER=12
[2024-05-17 16:22:01] Starting ATLAS job with PandaID=6207900145
[2024-05-17 16:22:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 17:15:39]  *** The last 200 lines of the pilot log: ***
[2024-05-17 17:15:39]  is_tar=False
[2024-05-17 17:15:39]  lfn=log.38776104._012979.job.log.tgz.1
[2024-05-17 17:15:39]  mtime=0
[2024-05-17 17:15:39]  protocol_id=None
[2024-05-17 17:15:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 17:15:39]  replicas=None
[2024-05-17 17:15:39]  scope=mc23_13p6TeV
[2024-05-17 17:15:39]  status=None
[2024-05-17 17:15:39]  status_code=0
[2024-05-17 17:15:39]  storage_token=
[2024-05-17 17:15:39]  surl=/home/boinc/slots/0/PanDA_Pilot-6207900145/log.38776104._012979.job.log.tgz.1
[2024-05-17 17:15:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/85/log.38776104._012979.job.log.tgz.1
[2024-05-17 17:15:39]  workdir=None
[2024-05-17 17:15:39] ]
[2024-05-17 17:15:39] 2024-05-18 00:15:05,509 | INFO     | transferring file log.38776104._012979.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207900145/log.38776104._012979.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 17:15:39] 2024-05-18 00:15:05,509 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207900145/log.38776104._012979.job.log.tgz.1 /home/boinc/slots/0/log.38776104._012979.job.log.t
[2024-05-17 17:15:39] 2024-05-18 00:15:05,538 | INFO     | adding to output.list: log.38776104._012979.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ad/85/log.38776104._012979.job.log.tg
[2024-05-17 17:15:39] 2024-05-18 00:15:05,538 | INFO     | summary of transferred files:
[2024-05-17 17:15:39] 2024-05-18 00:15:05,538 | INFO     |  -- lfn=log.38776104._012979.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 17:15:39] 2024-05-18 00:15:05,539 | INFO     | stage-out finished correctly
[2024-05-17 17:15:39] 2024-05-18 00:15:05,590 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 17:15:39] 2024-05-18 00:15:06,923 | INFO     | monitor loop #252: job 0:6207900145 is in state 'finished'
[2024-05-17 17:15:39] 2024-05-18 00:15:06,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 17:15:39] 2024-05-18 00:15:07,555 | INFO     | job 6207900145 has state=finished
[2024-05-17 17:15:39] 2024-05-18 00:15:07,555 | INFO     | preparing for final server update for job 6207900145 in state='finished'
[2024-05-17 17:15:39] 2024-05-18 00:15:07,556 | INFO     | this job has now completed (state=finished)
[2024-05-17 17:15:39] 2024-05-18 00:15:07,556 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 17:15:39] 2024-05-18 00:15:07,556 | INFO     | job 6207900145 has finished - writing final server update
[2024-05-17 17:15:39] 2024-05-18 00:15:07,557 | INFO     | total number of processed events: 400 (read)
[2024-05-17 17:15:39] 2024-05-18 00:15:07,564 | INFO     | executing command: lscpu
[2024-05-17 17:15:39] 2024-05-18 00:15:07,611 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 17:15:39] 2024-05-18 00:15:07,612 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 17:15:39] 2024-05-18 00:15:07,675 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 17:15:39] 2024-05-18 00:15:09,428 | INFO     | monitor loop #253: job 0:6207900145 is in state 'finished'
[2024-05-17 17:15:39] 2024-05-18 00:15:09,429 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 17:15:39] 2024-05-18 00:15:11,931 | INFO     | monitor loop #254: job 0:6207900145 is in state 'finished'
[2024-05-17 17:15:39] 2024-05-18 00:15:11,932 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 17:15:39] 2024-05-18 00:15:14,434 | INFO     | monitor loop #255: job 0:6207900145 is in state 'finished'
[2024-05-17 17:15:39] 2024-05-18 00:15:14,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 17:15:39] 2024-05-18 00:15:16,938 | INFO     | monitor loop #256: job 0:6207900145 is in state 'finished'
[2024-05-17 17:15:39] 2024-05-18 00:15:16,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 17:15:39] 2024-05-18 00:15:17,384 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 17:15:39] 2024-05-18 00:15:17,385 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207900145/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 17:15:39] 2024-05-18 00:15:17,386 | INFO     | extracted standard info from prmon json
[2024-05-17 17:15:39] 2024-05-18 00:15:17,387 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 17:15:39] 2024-05-18 00:15:17,387 | WARNING  | GPU info not found in prmon json
[2024-05-17 17:15:39] 2024-05-18 00:15:17,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 17:15:39] 2024-05-18 00:15:17,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 17:15:39] 2024-05-18 00:15:17,390 | INFO     | fitting pss+swap vs Time
[2024-05-17 17:15:39] 2024-05-18 00:15:17,390 | INFO     | model: linear, x: [1715988460.0, 1715988521.0, 1715988582.0, 1715988643.0, 1715988704.0, 1715988765.0, 1715988826.0, 1715988887.0, 1715988948.0, 1715989009.0, 1715
[2024-05-17 17:15:39] 2024-05-18 00:15:17,390 | INFO     | sum of square deviations: 28242390.0
[2024-05-17 17:15:39] 2024-05-18 00:15:17,391 | INFO     | sum of deviations: 16137413482.0
[2024-05-17 17:15:39] 2024-05-18 00:15:17,391 | INFO     | mean x: 1715989802.0
[2024-05-17 17:15:39] 2024-05-18 00:15:17,391 | INFO     | mean y: 2715226.4444444445
[2024-05-17 17:15:39] 2024-05-18 00:15:17,391 | INFO     | -- intersect: -980496348973.4802
[2024-05-17 17:15:39] 2024-05-18 00:15:17,391 | INFO     | intersect: -980496348973.4802
[2024-05-17 17:15:39] 2024-05-18 00:15:17,392 | INFO     | chi2: 1.7951283541050722
[2024-05-17 17:15:39] 2024-05-18 00:15:17,392 | INFO     | -- intersect: -980496348973.4802
[2024-05-17 17:15:39] 2024-05-18 00:15:17,392 | INFO     | current memory leak: 571.39 B/s (using 45 data points, chi2=1.80)
[2024-05-17 17:15:39] 2024-05-18 00:15:17,393 | INFO     | ..............................
[2024-05-17 17:15:39] 2024-05-18 00:15:17,393 | INFO     | . Timing measurements:
[2024-05-17 17:15:39] 2024-05-18 00:15:17,393 | INFO     | . get job = 0 s
[2024-05-17 17:15:39] 2024-05-18 00:15:17,393 | INFO     | . initial setup = 2 s
[2024-05-17 17:15:39] 2024-05-18 00:15:17,393 | INFO     | . payload setup = 5 s
[2024-05-17 17:15:39] 2024-05-18 00:15:17,393 | INFO     | . stage-in = 0 s
[2024-05-17 17:15:39] 2024-05-18 00:15:17,393 | INFO     | . payload execution = 3148 s
[2024-05-17 17:15:39] 2024-05-18 00:15:17,393 | INFO     | . stage-out = 0 s
[2024-05-17 17:15:39] 2024-05-18 00:15:17,393 | INFO     | . log creation = 0 s
[2024-05-17 17:15:39] 2024-05-18 00:15:17,394 | INFO     | ..............................
[2024-05-17 17:15:39] 2024-05-18 00:15:17,486 | INFO     | 
[2024-05-17 17:15:39] 2024-05-18 00:15:17,487 | INFO     | job summary report
[2024-05-17 17:15:39] 2024-05-18 00:15:17,487 | INFO     | --------------------------------------------------
[2024-05-17 17:15:39] 2024-05-18 00:15:17,487 | INFO     | PanDA job id: 6207900145
[2024-05-17 17:15:39] 2024-05-18 00:15:17,487 | INFO     | task id: 38776104
[2024-05-17 17:15:39] 2024-05-18 00:15:17,487 | INFO     | errors: (none)
[2024-05-17 17:15:39] 2024-05-18 00:15:17,487 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 17:15:39] 2024-05-18 00:15:17,487 | INFO     | pilot state: finished 
[2024-05-17 17:15:39] 2024-05-18 00:15:17,487 | INFO     | transexitcode: 0
[2024-05-17 17:15:39] 2024-05-18 00:15:17,487 | INFO     | exeerrorcode: 0
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | exeerrordiag: 
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | exitcode: 0
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | exitmsg: OK
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | cpuconsumptiontime: 26943 s
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | nevents: 400
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | neventsw: 0
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | pid: 245386
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | pgrp: 245386
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | corecount: 12
[2024-05-17 17:15:39] 2024-05-18 00:15:17,488 | INFO     | event service: False
[2024-05-17 17:15:39] 2024-05-18 00:15:17,489 | INFO     | sizes: {0: 2392250, 4: 2392456, 11: 2392484, 3157: 2418006, 3158: 2427016, 3170: 2427130}
[2024-05-17 17:15:39] 2024-05-18 00:15:17,489 | INFO     | --------------------------------------------------
[2024-05-17 17:15:39] 2024-05-18 00:15:17,489 | INFO     | 
[2024-05-17 17:15:39] 2024-05-18 00:15:17,489 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 17:15:39] 2024-05-18 00:15:17,521 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,521 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,521 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,521 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,523 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,523 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,523 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 17:15:39] 2024-05-18 00:15:17,523 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,523 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 17:15:39] 2024-05-18 00:15:17,523 | INFO     | job 6207900145 has completed (purged errors)
[2024-05-17 17:15:39] 2024-05-18 00:15:17,523 | INFO     | overall cleanup function is called
[2024-05-17 17:15:39] 2024-05-18 00:15:18,530 | INFO     | --- collectZombieJob: --- 10, [245386]
[2024-05-17 17:15:39] 2024-05-18 00:15:18,530 | INFO     | zombie collector waiting for pid 245386
[2024-05-17 17:15:39] 2024-05-18 00:15:18,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 17:15:39] 2024-05-18 00:15:19,536 | INFO     | collected zombie processes
[2024-05-17 17:15:39] 2024-05-18 00:15:19,536 | INFO     | will now attempt to kill all subprocesses of pid=245386
[2024-05-17 17:15:39] 2024-05-18 00:15:19,657 | INFO     | process IDs to be killed: [245386] (in reverse order)
[2024-05-17 17:15:39] 2024-05-18 00:15:19,769 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 17:15:39] 2024-05-18 00:15:19,769 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 17:15:39] 2024-05-18 00:15:19,776 | INFO     | did not find any defunct processes belonging to 245386
[2024-05-17 17:15:39] 2024-05-18 00:15:19,781 | INFO     | did not find any defunct processes belonging to 245386
[2024-05-17 17:15:39] 2024-05-18 00:15:19,781 | INFO     | ready for new job
[2024-05-17 17:15:39] 2024-05-18 00:15:19,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 17:15:39] 2024-05-18 00:15:19,783 | INFO     | *************************************
[2024-05-17 17:15:39] 2024-05-18 00:15:19,783 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 17:15:39] 2024-05-18 00:15:19,783 | INFO     | *************************************
[2024-05-17 17:15:39] 2024-05-18 00:15:19,783 | INFO     | 
[2024-05-17 17:15:39] 2024-05-18 00:15:19,787 | INFO     | architecture information:
[2024-05-17 17:15:39] 2024-05-18 00:15:19,787 | INFO     | executing command: cat /etc/os-release
[2024-05-17 17:15:39] 2024-05-18 00:15:19,810 | INFO     | cat /etc/os-release:
[2024-05-17 17:15:39] NAME="CentOS Linux"
[2024-05-17 17:15:39] VERSION="7 (Core)"
[2024-05-17 17:15:39] ID="centos"
[2024-05-17 17:15:39] ID_LIKE="rhel fedora"
[2024-05-17 17:15:39] VERSION_ID="7"
[2024-05-17 17:15:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 17:15:39] ANSI_COLOR="0;31"
[2024-05-17 17:15:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 17:15:39] HOME_URL="https://www.centos.org/"
[2024-05-17 17:15:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 17:15:39] 
[2024-05-17 17:15:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 17:15:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 17:15:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 17:15:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 17:15:39] 
[2024-05-17 17:15:39] 2024-05-18 00:15:19,810 | INFO     | *************************************
[2024-05-17 17:15:39] 2024-05-18 00:15:20,313 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 17:15:39] 2024-05-18 00:15:20,340 | INFO     | sufficient remaining disk space (2232395235328 B)
[2024-05-17 17:15:39] 2024-05-18 00:15:20,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 17:15:39] 2024-05-18 00:15:20,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 17:15:39] 2024-05-18 00:15:20,430 | INFO     | all payload control threads have been joined
[2024-05-17 17:15:39] 2024-05-18 00:15:20,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:15:39] 2024-05-18 00:15:20,452 | INFO     | aborting loop
[2024-05-17 17:15:39] 2024-05-18 00:15:20,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 17:15:39] 2024-05-18 00:15:20,865 | INFO     | all job control threads have been joined
[2024-05-17 17:15:39] 2024-05-18 00:15:21,095 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 17:15:39] 2024-05-18 00:15:21,095 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 17:15:39] 2024-05-18 00:15:21,095 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 17:15:39] 2024-05-18 00:15:21,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 17:15:39] 2024-05-18 00:15:21,337 | INFO     | all data control threads have been joined
[2024-05-17 17:15:39] 2024-05-18 00:15:21,346 | INFO     | [job] retrieve thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:21,432 | INFO     | [payload] control thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:21,459 | INFO     | [job] job monitor thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:21,604 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:21,656 | INFO     | [payload] validate_post thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:21,871 | INFO     | [job] control thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:22,065 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:22,328 | INFO     | [payload] failed_post thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:22,340 | INFO     | [data] control thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:22,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:15:39] 2024-05-18 00:15:22,599 | INFO     | [job] validate thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:22,606 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:22,770 | INFO     | [data] copytool_in thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:23,116 | INFO     | [data] copytool_out thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:23,505 | INFO     | [job] queue monitor thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:24,703 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:30,924 | INFO     | job.realtimelogging is not enabled
[2024-05-17 17:15:39] 2024-05-18 00:15:31,930 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 17:15:39] 2024-05-18 00:15:33,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139777971115840)>', '<ExcThread(monitor, started 139777420551936)>']
[2024-05-17 17:15:39] 2024-05-18 00:15:34,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 17:15:39] 2024-05-18 00:15:34,181 | INFO     | [monitor] control thread has ended
[2024-05-17 17:15:39] 2024-05-18 00:15:38,676 | INFO     | all workflow threads have been joined
[2024-05-17 17:15:39] 2024-05-18 00:15:38,677 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 17:15:39] 2024-05-18 00:15:38,677 | INFO     | traces error code: 0
[2024-05-17 17:15:39] 2024-05-18 00:15:38,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 17:15:39] 2024-05-18 00:15:38,775 [wrapper] ==== pilot stdout END ====
[2024-05-17 17:15:39] 2024-05-18 00:15:38,779 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 17:15:39] 2024-05-18 00:15:38,782 [wrapper] pilotpid: 238937
[2024-05-17 17:15:39] 2024-05-18 00:15:38,786 [wrapper] Pilot exit status: 0
[2024-05-17 17:15:39] 2024-05-18 00:15:38,799 [wrapper] pandaids: 6207900145
[2024-05-17 17:15:39] 2024-05-18 00:15:38,855 [wrapper] cleanup: SIGTERM to supervisor_pilot   4334 238938
[2024-05-17 17:15:39] 2024-05-18 00:15:38,860 [wrapper] Test setup, not cleaning
[2024-05-17 17:15:39] 2024-05-18 00:15:38,864 [wrapper] ==== wrapper stdout END ====
[2024-05-17 17:15:39] 2024-05-18 00:15:38,868 [wrapper] ==== wrapper stderr END ====
[2024-05-17 17:15:39] 2024-05-18 00:15:38,876 [wrapper] apfmon messages muted
[2024-05-17 17:15:39]  *** Error codes and diagnostics ***
[2024-05-17 17:15:39]     "exeErrorCode": 0,
[2024-05-17 17:15:39]     "exeErrorDiag": "",
[2024-05-17 17:15:39]     "pilotErrorCode": 0,
[2024-05-17 17:15:39]     "pilotErrorDiag": "",
[2024-05-17 17:15:39]  *** Listing of results directory ***
[2024-05-17 17:15:39] total 822336
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc    467845 May 17 02:03 pilot3.tar.gz
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc      5633 May 17 02:26 queuedata.json
[2024-05-17 17:15:39] -rwx------ 1 boinc boinc     32251 May 17 02:27 runpilot2-wrapper.sh
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc       100 May 17 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 17:15:39] -rwxr-xr-x 1 boinc boinc      7986 May 17 16:21 run_atlas
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc       105 May 17 16:21 job.xml
[2024-05-17 17:15:39] -rw-r--r-- 2 boinc boinc 603153085 May 17 16:21 EVNT.38776100._000147.pool.root.1
[2024-05-17 17:15:39] -rw-r--r-- 2 boinc boinc     17537 May 17 16:21 start_atlas.sh
[2024-05-17 17:15:39] drwxrwx--x 2 boinc boinc      4096 May 17 16:21 shared
[2024-05-17 17:15:39] -rw-r--r-- 2 boinc boinc    480009 May 17 16:21 input.tar.gz
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc      6626 May 17 16:21 init_data.xml
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc         0 May 17 16:21 boinc_lockfile
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc      2642 May 17 16:22 pandaJob.out
[2024-05-17 17:15:39] -rw------- 1 boinc boinc       424 May 17 16:22 setup.sh.local
[2024-05-17 17:15:39] -rw------- 1 boinc boinc   1019081 May 17 16:22 agis_schedconf.cvmfs.json
[2024-05-17 17:15:39] -rw------- 1 boinc boinc         0 May 17 16:22 agis_ddmendpoints.agis.ALL.json
[2024-05-17 17:15:39] -rw------- 1 boinc boinc   1324701 May 17 16:22 cric_ddmendpoints.json
[2024-05-17 17:15:39] drwx------ 4 boinc boinc      4096 May 17 16:22 pilot3
[2024-05-17 17:15:39] -rw------- 1 boinc boinc 234006250 May 17 17:14 HITS.38776104._012979.pool.root.1
[2024-05-17 17:15:39] -rw------- 1 boinc boinc      1038 May 17 17:15 memory_monitor_summary.json
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc       530 May 17 17:15 boinc_task_state.xml
[2024-05-17 17:15:39] -rw------- 1 boinc boinc    355254 May 17 17:15 log.38776104._012979.job.log.tgz.1
[2024-05-17 17:15:39] -rw------- 1 boinc boinc      7751 May 17 17:15 heartbeat.json
[2024-05-17 17:15:39] -rw------- 1 boinc boinc        95 May 17 17:15 pilot_heartbeat.json
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc        27 May 17 17:15 wrapper_checkpoint.txt
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc      8192 May 17 17:15 boinc_mmap_file
[2024-05-17 17:15:39] -rw------- 1 boinc boinc      4282 May 17 17:15 pilotlog.txt
[2024-05-17 17:15:39] -rw------- 1 boinc boinc    334211 May 17 17:15 log.38776104._012979.job.log.1
[2024-05-17 17:15:39] -rw------- 1 boinc boinc       357 May 17 17:15 output.list
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc       620 May 17 17:15 runtime_log
[2024-05-17 17:15:39] -rw------- 1 boinc boinc    706560 May 17 17:15 result.tar.gz
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc     11286 May 17 17:15 runtime_log.err
[2024-05-17 17:15:39] -rw------- 1 boinc boinc       651 May 17 17:15 oPtKDmA38R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmaqQKDmh0GdZn.diag
[2024-05-17 17:15:39] -rw-r--r-- 1 boinc boinc     21882 May 17 17:15 stderr.txt
[2024-05-17 17:15:39] HITS file was successfully produced:
[2024-05-17 17:15:39] -rw------- 1 boinc boinc 234006250 May 17 17:14 shared/HITS.pool.root.1
[2024-05-17 17:15:39]  *** Contents of shared directory: ***
[2024-05-17 17:15:39] total 818736
[2024-05-17 17:15:39] -rw-r--r-- 2 boinc boinc 603153085 May 17 16:21 ATLAS.root_0
[2024-05-17 17:15:39] -rw-r--r-- 2 boinc boinc     17537 May 17 16:21 start_atlas.sh
[2024-05-17 17:15:39] -rw-r--r-- 2 boinc boinc    480009 May 17 16:21 input.tar.gz
[2024-05-17 17:15:39] -rw------- 1 boinc boinc 234006250 May 17 17:14 HITS.pool.root.1
[2024-05-17 17:15:39] -rw------- 1 boinc boinc    706560 May 17 17:15 result.tar.gz
17:15:41 (234777): run_atlas exited; CPU time 26876.084367
17:15:41 (234777): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN