Stderr output

<core_client_version>7.22.1</core_client_version>
<![CDATA[
<stderr_txt>
22:52:15 (3141802): wrapper (7.7.26015): starting
22:52:15 (3141802): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 22:52:15] Arguments: --nthreads 12
[2024-05-17 22:52:15] Threads: 12
[2024-05-17 22:52:15] Checking for CVMFS
[2024-05-17 22:52:15] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 22:52:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 22:52:15] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 22:52:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 22:52:16] 2.11.0.0 2456805 1035 87532 132857 1 237 4537269 6144000 11840 130560 0 4926705 99.324 3318799 6119 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.145:3128 1
[2024-05-17 22:52:16] CVMFS is ok
[2024-05-17 22:52:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 22:52:16] Checking for apptainer binary...
[2024-05-17 22:52:16] apptainer is not installed, using version from CVMFS
[2024-05-17 22:52:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 22:52:16] radiat0r
[2024-05-17 22:52:16] apptainer works
[2024-05-17 22:52:16] Set ATHENA_PROC_NUMBER=12
[2024-05-17 22:52:16] Set ATHENA_CORE_NUMBER=12
[2024-05-17 22:52:16] Starting ATLAS job with PandaID=6207857325
[2024-05-17 22:52:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/boinc/slots/53 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 01:32:24]  *** The last 200 lines of the pilot log: ***
[2024-05-18 01:32:24] 2024-05-18 01:32:02,055 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 01:32:24] 2024-05-18 01:32:02,056 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 01:32:24] 2024-05-18 01:32:02,060 | INFO     | fitting pss+swap vs Time
[2024-05-18 01:32:24] 2024-05-18 01:32:02,060 | INFO     | model: linear, x: [1715986386.0, 1715986447.0, 1715986508.0, 1715986569.0, 1715986630.0, 1715986691.0, 1715986752.0, 1715986813.0, 1715986874.0, 1715986935.0, 1715
[2024-05-18 01:32:24] 2024-05-18 01:32:02,060 | INFO     | sum of square deviations: 1199940638.0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,061 | INFO     | sum of deviations: 84686684361.0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,061 | INFO     | mean x: 1715991144.0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,061 | INFO     | mean y: 2611046.898089172
[2024-05-18 01:32:24] 2024-05-18 01:32:02,061 | INFO     | -- intersect: -121104713579.10504
[2024-05-18 01:32:24] 2024-05-18 01:32:02,062 | INFO     | intersect: -121104713579.10504
[2024-05-18 01:32:24] 2024-05-18 01:32:02,062 | INFO     | chi2: 4.804246828730799
[2024-05-18 01:32:24] 2024-05-18 01:32:02,062 | INFO     | model: linear, x: [1715986386.0, 1715986447.0, 1715986508.0, 1715986569.0, 1715986630.0, 1715986691.0, 1715986752.0, 1715986813.0, 1715986874.0, 1715986935.0, 1715
[2024-05-18 01:32:24] 2024-05-18 01:32:02,062 | INFO     | sum of square deviations: 1088905998.0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,063 | INFO     | sum of deviations: 92264028751.50003
[2024-05-18 01:32:24] 2024-05-18 01:32:02,063 | INFO     | mean x: 1715990991.5
[2024-05-18 01:32:24] 2024-05-18 01:32:02,063 | INFO     | mean y: 2621063.927631579
[2024-05-18 01:32:24] 2024-05-18 01:32:02,063 | INFO     | -- intersect: -145394908629.0542
[2024-05-18 01:32:24] 2024-05-18 01:32:02,063 | INFO     | intersect: -145394908629.0542
[2024-05-18 01:32:24] 2024-05-18 01:32:02,064 | INFO     | chi2: 4.085105071206054
[2024-05-18 01:32:24] 2024-05-18 01:32:02,064 | INFO     | current chi2=4.085105071206054 (change=14.968876145664852 %)
[2024-05-18 01:32:24] 2024-05-18 01:32:02,064 | INFO     | right removable region: 151
[2024-05-18 01:32:24] 2024-05-18 01:32:02,064 | INFO     | model: linear, x: [1715986691.0, 1715986752.0, 1715986813.0, 1715986874.0, 1715986935.0, 1715986996.0, 1715987057.0, 1715987118.0, 1715987179.0, 1715987240.0, 1715
[2024-05-18 01:32:24] 2024-05-18 01:32:02,064 | INFO     | sum of square deviations: 1088905998.0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,065 | INFO     | sum of deviations: 42657102786.999985
[2024-05-18 01:32:24] 2024-05-18 01:32:02,065 | INFO     | mean x: 1715991296.5
[2024-05-18 01:32:24] 2024-05-18 01:32:02,065 | INFO     | mean y: 2668549.2236842103
[2024-05-18 01:32:24] 2024-05-18 01:32:02,065 | INFO     | -- intersect: -67220046038.4848
[2024-05-18 01:32:24] 2024-05-18 01:32:02,065 | INFO     | intersect: -67220046038.4848
[2024-05-18 01:32:24] 2024-05-18 01:32:02,066 | INFO     | chi2: 2.3224125773753412
[2024-05-18 01:32:24] 2024-05-18 01:32:02,066 | INFO     | current chi2=2.3224125773753412 (change=51.65917447274698 %)
[2024-05-18 01:32:24] 2024-05-18 01:32:02,066 | INFO     | model: linear, x: [1715986996.0, 1715987057.0, 1715987118.0, 1715987179.0, 1715987240.0, 1715987301.0, 1715987362.0, 1715987423.0, 1715987484.0, 1715987545.0, 1715
[2024-05-18 01:32:24] 2024-05-18 01:32:02,066 | INFO     | sum of square deviations: 984941258.0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,067 | INFO     | sum of deviations: 9757723967.999996
[2024-05-18 01:32:24] 2024-05-18 01:32:02,067 | INFO     | mean x: 1715991449.0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,067 | INFO     | mean y: 2716819.870748299
[2024-05-18 01:32:24] 2024-05-18 01:32:02,067 | INFO     | -- intersect: -16997455276.47405
[2024-05-18 01:32:24] 2024-05-18 01:32:02,067 | INFO     | intersect: -16997455276.47405
[2024-05-18 01:32:24] 2024-05-18 01:32:02,068 | INFO     | chi2: 0.9452407366558697
[2024-05-18 01:32:24] 2024-05-18 01:32:02,068 | INFO     | current chi2=0.9452407366558697 (change=59.299189736384946 %)
[2024-05-18 01:32:24] 2024-05-18 01:32:02,068 | INFO     | model: linear, x: [1715987301.0, 1715987362.0, 1715987423.0, 1715987484.0, 1715987545.0, 1715987606.0, 1715987667.0, 1715987728.0, 1715987789.0, 1715987850.0, 1715
[2024-05-18 01:32:24] 2024-05-18 01:32:02,068 | INFO     | sum of square deviations: 887813855.5
[2024-05-18 01:32:24] 2024-05-18 01:32:02,069 | INFO     | sum of deviations: -776901795.0000019
[2024-05-18 01:32:24] 2024-05-18 01:32:02,069 | INFO     | mean x: 1715991601.5
[2024-05-18 01:32:24] 2024-05-18 01:32:02,069 | INFO     | mean y: 2733257.23943662
[2024-05-18 01:32:24] 2024-05-18 01:32:02,069 | INFO     | -- intersect: 1504350907.3260858
[2024-05-18 01:32:24] 2024-05-18 01:32:02,069 | INFO     | intersect: 1504350907.3260858
[2024-05-18 01:32:24] 2024-05-18 01:32:02,069 | INFO     | chi2: 0.7923847954953566
[2024-05-18 01:32:24] 2024-05-18 01:32:02,069 | INFO     | current chi2=0.7923847954953566 (change=16.171112313810788 %)
[2024-05-18 01:32:24] 2024-05-18 01:32:02,069 | INFO     | left removable region: 30
[2024-05-18 01:32:24] 2024-05-18 01:32:02,070 | INFO     | model: linear, x: [1715988216.0, 1715988277.0, 1715988338.0, 1715988399.0, 1715988460.0, 1715988521.0, 1715988582.0, 1715988643.0, 1715988704.0, 1715988765.0, 1715
[2024-05-18 01:32:24] 2024-05-18 01:32:02,070 | INFO     | sum of square deviations: 549294020.0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,070 | INFO     | sum of deviations: 2066069573.0000002
[2024-05-18 01:32:24] 2024-05-18 01:32:02,070 | INFO     | mean x: 1715991876.0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,071 | INFO     | mean y: 2760951.380165289
[2024-05-18 01:32:24] 2024-05-18 01:32:02,071 | INFO     | -- intersect: -6451630455.463822
[2024-05-18 01:32:24] 2024-05-18 01:32:02,071 | INFO     | intersect: -6451630455.463822
[2024-05-18 01:32:24] 2024-05-18 01:32:02,071 | INFO     | chi2: 0.00018648156960477094
[2024-05-18 01:32:24] 2024-05-18 01:32:02,071 | INFO     | -- intersect: -6451630455.463822
[2024-05-18 01:32:24] 2024-05-18 01:32:02,071 | INFO     | current memory leak: 3.76 B/s (using 121 data points, chi2=0.00)
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | ..............................
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | . Timing measurements:
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | . get job = 0 s
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | . initial setup = 1 s
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | . payload setup = 8 s
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | . stage-in = 0 s
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | . payload execution = 9530 s
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | . stage-out = 1 s
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | . log creation = 0 s
[2024-05-18 01:32:24] 2024-05-18 01:32:02,072 | INFO     | ..............................
[2024-05-18 01:32:24] 2024-05-18 01:32:02,472 | INFO     | 
[2024-05-18 01:32:24] 2024-05-18 01:32:02,472 | INFO     | job summary report
[2024-05-18 01:32:24] 2024-05-18 01:32:02,472 | INFO     | --------------------------------------------------
[2024-05-18 01:32:24] 2024-05-18 01:32:02,472 | INFO     | PanDA job id: 6207857325
[2024-05-18 01:32:24] 2024-05-18 01:32:02,472 | INFO     | task id: 38920987
[2024-05-18 01:32:24] 2024-05-18 01:32:02,472 | INFO     | errors: (none)
[2024-05-18 01:32:24] 2024-05-18 01:32:02,473 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 01:32:24] 2024-05-18 01:32:02,473 | INFO     | pilot state: finished 
[2024-05-18 01:32:24] 2024-05-18 01:32:02,473 | INFO     | transexitcode: 0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,473 | INFO     | exeerrorcode: 0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,473 | INFO     | exeerrordiag: 
[2024-05-18 01:32:24] 2024-05-18 01:32:02,473 | INFO     | exitcode: 0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,473 | INFO     | exitmsg: OK
[2024-05-18 01:32:24] 2024-05-18 01:32:02,473 | INFO     | cpuconsumptiontime: 99737 s
[2024-05-18 01:32:24] 2024-05-18 01:32:02,474 | INFO     | nevents: 400
[2024-05-18 01:32:24] 2024-05-18 01:32:02,474 | INFO     | neventsw: 0
[2024-05-18 01:32:24] 2024-05-18 01:32:02,474 | INFO     | pid: 3158948
[2024-05-18 01:32:24] 2024-05-18 01:32:02,474 | INFO     | pgrp: 3158948
[2024-05-18 01:32:24] 2024-05-18 01:32:02,474 | INFO     | corecount: 12
[2024-05-18 01:32:24] 2024-05-18 01:32:02,474 | INFO     | event service: False
[2024-05-18 01:32:24] 2024-05-18 01:32:02,474 | INFO     | sizes: {0: 2392125, 1: 2392125, 7: 2392359, 11: 2392387, 9539: 2420545, 9542: 2429501, 9543: 2429685, 9552: 2429855}
[2024-05-18 01:32:24] 2024-05-18 01:32:02,474 | INFO     | --------------------------------------------------
[2024-05-18 01:32:24] 2024-05-18 01:32:02,474 | INFO     | 
[2024-05-18 01:32:24] 2024-05-18 01:32:02,475 | INFO     | executing command: ls -lF /home/boinc/slots/53
[2024-05-18 01:32:24] 2024-05-18 01:32:02,516 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,516 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,516 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,516 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | job 6207857325 has completed (purged errors)
[2024-05-18 01:32:24] 2024-05-18 01:32:02,517 | INFO     | overall cleanup function is called
[2024-05-18 01:32:24] 2024-05-18 01:32:03,526 | INFO     | --- collectZombieJob: --- 10, [3158948]
[2024-05-18 01:32:24] 2024-05-18 01:32:03,526 | INFO     | zombie collector waiting for pid 3158948
[2024-05-18 01:32:24] 2024-05-18 01:32:03,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 01:32:24] 2024-05-18 01:32:04,529 | INFO     | collected zombie processes
[2024-05-18 01:32:24] 2024-05-18 01:32:04,530 | INFO     | will now attempt to kill all subprocesses of pid=3158948
[2024-05-18 01:32:24] 2024-05-18 01:32:04,901 | INFO     | process IDs to be killed: [3158948] (in reverse order)
[2024-05-18 01:32:24] 2024-05-18 01:32:05,273 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 01:32:24] 2024-05-18 01:32:05,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 01:32:24] 2024-05-18 01:32:05,314 | INFO     | did not find any defunct processes belonging to 3158948
[2024-05-18 01:32:24] 2024-05-18 01:32:05,354 | INFO     | did not find any defunct processes belonging to 3158948
[2024-05-18 01:32:24] 2024-05-18 01:32:05,355 | INFO     | ready for new job
[2024-05-18 01:32:24] 2024-05-18 01:32:05,355 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 01:32:24] 2024-05-18 01:32:05,357 | INFO     | *************************************
[2024-05-18 01:32:24] 2024-05-18 01:32:05,357 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 01:32:24] 2024-05-18 01:32:05,357 | INFO     | *************************************
[2024-05-18 01:32:24] 2024-05-18 01:32:05,357 | INFO     | 
[2024-05-18 01:32:24] 2024-05-18 01:32:05,394 | INFO     | architecture information:
[2024-05-18 01:32:24] 2024-05-18 01:32:05,395 | INFO     | executing command: cat /etc/os-release
[2024-05-18 01:32:24] 2024-05-18 01:32:05,417 | INFO     | cat /etc/os-release:
[2024-05-18 01:32:24] NAME="CentOS Linux"
[2024-05-18 01:32:24] VERSION="7 (Core)"
[2024-05-18 01:32:24] ID="centos"
[2024-05-18 01:32:24] ID_LIKE="rhel fedora"
[2024-05-18 01:32:24] VERSION_ID="7"
[2024-05-18 01:32:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 01:32:24] ANSI_COLOR="0;31"
[2024-05-18 01:32:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 01:32:24] HOME_URL="https://www.centos.org/"
[2024-05-18 01:32:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 01:32:24] 
[2024-05-18 01:32:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 01:32:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 01:32:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 01:32:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 01:32:24] 
[2024-05-18 01:32:24] 2024-05-18 01:32:05,417 | INFO     | *************************************
[2024-05-18 01:32:24] 2024-05-18 01:32:05,922 | INFO     | executing command: df -mP /home/boinc/slots/53
[2024-05-18 01:32:24] 2024-05-18 01:32:05,942 | INFO     | sufficient remaining disk space (1738531667968 B)
[2024-05-18 01:32:24] 2024-05-18 01:32:05,942 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 01:32:24] 2024-05-18 01:32:05,942 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 01:32:24] 2024-05-18 01:32:05,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 01:32:24] 2024-05-18 01:32:05,942 | INFO     | aborting loop
[2024-05-18 01:32:24] 2024-05-18 01:32:05,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 01:32:24] 2024-05-18 01:32:05,992 | INFO     | all payload control threads have been joined
[2024-05-18 01:32:24] 2024-05-18 01:32:06,064 | INFO     | all data control threads have been joined
[2024-05-18 01:32:24] 2024-05-18 01:32:06,781 | INFO     | all job control threads have been joined
[2024-05-18 01:32:24] 2024-05-18 01:32:06,918 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 01:32:24] 2024-05-18 01:32:06,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 01:32:24] 2024-05-18 01:32:06,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 01:32:24] 2024-05-18 01:32:06,946 | INFO     | [job] retrieve thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:06,946 | INFO     | [job] job monitor thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:06,998 | INFO     | [payload] control thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:07,070 | INFO     | [data] control thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:07,106 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:07,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 01:32:24] 2024-05-18 01:32:07,202 | INFO     | [data] copytool_in thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:07,386 | INFO     | [payload] failed_post thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:07,482 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:07,786 | INFO     | [job] control thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:07,950 | INFO     | [data] copytool_out thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:08,190 | INFO     | [job] validate thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:08,203 | INFO     | [job] queue monitor thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:08,214 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:08,302 | INFO     | [payload] validate_post thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:08,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 01:32:24] 2024-05-18 01:32:12,346 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:16,597 | INFO     | job.realtimelogging is not enabled
[2024-05-18 01:32:24] 2024-05-18 01:32:17,606 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 01:32:24] 2024-05-18 01:32:19,294 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139805561141056)>', '<ExcThread(monitor, started 139804993902336)>']
[2024-05-18 01:32:24] 2024-05-18 01:32:20,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 01:32:24] 2024-05-18 01:32:20,006 | INFO     | [monitor] control thread has ended
[2024-05-18 01:32:24] 2024-05-18 01:32:24,321 | INFO     | all workflow threads have been joined
[2024-05-18 01:32:24] 2024-05-18 01:32:24,322 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 01:32:24] 2024-05-18 01:32:24,322 | INFO     | traces error code: 0
[2024-05-18 01:32:24] 2024-05-18 01:32:24,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 01:32:24] 2024-05-18 01:32:24,450 [wrapper] ==== pilot stdout END ====
[2024-05-18 01:32:24] 2024-05-18 01:32:24,453 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 01:32:24] 2024-05-18 01:32:24,460 [wrapper] pilotpid: 3148303
[2024-05-18 01:32:24] 2024-05-18 01:32:24,463 [wrapper] Pilot exit status: 0
[2024-05-18 01:32:24] 2024-05-18 01:32:24,478 [wrapper] pandaids: 6207857325
[2024-05-18 01:32:24] 2024-05-18 01:32:24,665 [wrapper] cleanup: SIGTERM to supervisor_pilot  205372 3148304
[2024-05-18 01:32:24] 2024-05-18 01:32:24,668 [wrapper] Test setup, not cleaning
[2024-05-18 01:32:24] 2024-05-18 01:32:24,676 [wrapper] ==== wrapper stdout END ====
[2024-05-18 01:32:24] 2024-05-18 01:32:24,678 [wrapper] ==== wrapper stderr END ====
[2024-05-18 01:32:24] 2024-05-18 01:32:24,684 [wrapper] apfmon messages muted
[2024-05-18 01:32:24]  *** Error codes and diagnostics ***
[2024-05-18 01:32:24]     "exeErrorCode": 0,
[2024-05-18 01:32:24]     "exeErrorDiag": "",
[2024-05-18 01:32:24]     "pilotErrorCode": 0,
[2024-05-18 01:32:24]     "pilotErrorDiag": "",
[2024-05-18 01:32:24]  *** Listing of results directory ***
[2024-05-18 01:32:24] total 957256
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc    467845 May 17 08:41 pilot3.tar.gz
[2024-05-18 01:32:24] -rwx------ 1 boinc boinc     32251 May 17 08:47 runpilot2-wrapper.sh
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc      5633 May 17 08:47 queuedata.json
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc       100 May 17 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 01:32:24] -rwxr-xr-x 1 boinc boinc      7986 May 17 22:52 run_atlas
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc       105 May 17 22:52 job.xml
[2024-05-18 01:32:24] -rw-r--r-- 2 boinc boinc     17537 May 17 22:52 start_atlas.sh
[2024-05-18 01:32:24] drwxrwx--x 2 boinc boinc      4096 May 17 22:52 shared
[2024-05-18 01:32:24] -rw-r--r-- 2 boinc boinc    480001 May 17 22:52 input.tar.gz
[2024-05-18 01:32:24] -rw-r--r-- 2 boinc boinc 639989752 May 17 22:52 EVNT.38776170._000137.pool.root.1
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc         0 May 17 22:52 boinc_lockfile
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc      2616 May 17 22:52 pandaJob.out
[2024-05-18 01:32:24] -rw------- 1 boinc boinc       424 May 17 22:52 setup.sh.local
[2024-05-18 01:32:24] -rw------- 1 boinc boinc   1019081 May 17 22:52 agis_schedconf.cvmfs.json
[2024-05-18 01:32:24] -rw------- 1 boinc boinc         0 May 17 22:52 agis_ddmendpoints.agis.ALL.json
[2024-05-18 01:32:24] -rw------- 1 boinc boinc   1324701 May 17 22:52 cric_ddmendpoints.json
[2024-05-18 01:32:24] drwx------ 4 boinc boinc      4096 May 17 22:52 pilot3
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc      9901 May 18 00:16 init_data.xml
[2024-05-18 01:32:24] -rw------- 1 boinc boinc 333957845 May 18 01:30 HITS.38920987._003583.pool.root.1
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc       530 May 18 01:31 boinc_task_state.xml
[2024-05-18 01:32:24] -rw------- 1 boinc boinc      1026 May 18 01:31 memory_monitor_summary.json
[2024-05-18 01:32:24] -rw------- 1 boinc boinc    413362 May 18 01:31 log.38920987._003583.job.log.tgz.1
[2024-05-18 01:32:24] -rw------- 1 boinc boinc      7647 May 18 01:32 heartbeat.json
[2024-05-18 01:32:24] -rw------- 1 boinc boinc        95 May 18 01:32 pilot_heartbeat.json
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc      8192 May 18 01:32 boinc_mmap_file
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc        27 May 18 01:32 wrapper_checkpoint.txt
[2024-05-18 01:32:24] -rw------- 1 boinc boinc      4283 May 18 01:32 pilotlog.txt
[2024-05-18 01:32:24] -rw------- 1 boinc boinc    960373 May 18 01:32 log.38920987._003583.job.log.1
[2024-05-18 01:32:24] -rw------- 1 boinc boinc       357 May 18 01:32 output.list
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc       620 May 18 01:32 runtime_log
[2024-05-18 01:32:24] -rw------- 1 boinc boinc   1392640 May 18 01:32 result.tar.gz
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc     10918 May 18 01:32 runtime_log.err
[2024-05-18 01:32:24] -rw------- 1 boinc boinc       634 May 18 01:32 apRMDmpQ8R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmBoQKDmySCPTm.diag
[2024-05-18 01:32:24] -rw-r--r-- 1 boinc boinc     21218 May 18 01:32 stderr.txt
[2024-05-18 01:32:24] HITS file was successfully produced:
[2024-05-18 01:32:24] -rw------- 1 boinc boinc 333957845 May 18 01:30 shared/HITS.pool.root.1
[2024-05-18 01:32:24]  *** Contents of shared directory: ***
[2024-05-18 01:32:24] total 952984
[2024-05-18 01:32:24] -rw-r--r-- 2 boinc boinc     17537 May 17 22:52 start_atlas.sh
[2024-05-18 01:32:24] -rw-r--r-- 2 boinc boinc    480001 May 17 22:52 input.tar.gz
[2024-05-18 01:32:24] -rw-r--r-- 2 boinc boinc 639989752 May 17 22:52 ATLAS.root_0
[2024-05-18 01:32:24] -rw------- 1 boinc boinc 333957845 May 18 01:30 HITS.pool.root.1
[2024-05-18 01:32:24] -rw------- 1 boinc boinc   1392640 May 18 01:32 result.tar.gz
01:32:26 (3141802): run_atlas exited; CPU time 99468.199385
01:32:26 (3141802): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN