Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
08:13:43 (140981): wrapper (7.7.26015): starting
08:13:43 (140981): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 08:13:43] Arguments: --nthreads 12
[2024-05-17 08:13:43] Threads: 12
[2024-05-17 08:13:43] Checking for CVMFS
[2024-05-17 08:13:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 08:13:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 08:13:44] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 08:13:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 08:13:44] 2.10.1.0 127188 183641 155512 132844 2 110 34033349 45568000 12892 130560 0 1091188002 99.763 678779612 18176 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 08:13:44] CVMFS is ok
[2024-05-17 08:13:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 08:13:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 08:13:44] Further information can be found at the LHC@home message board.
[2024-05-17 08:13:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 08:13:44] Checking for apptainer binary...
[2024-05-17 08:13:44] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 08:13:44] Running /usr/bin/apptainer --version
[2024-05-17 08:13:44] apptainer version 1.1.8-1.el7
[2024-05-17 08:13:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 08:13:45] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0158.triumf.lcg
[2024-05-17 08:13:45] apptainer works
[2024-05-17 08:13:45] Set ATHENA_PROC_NUMBER=12
[2024-05-17 08:13:45] Set ATHENA_CORE_NUMBER=12
[2024-05-17 08:13:45] Starting ATLAS job with PandaID=6207846334
[2024-05-17 08:13:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 09:23:04]  *** The last 200 lines of the pilot log: ***
[2024-05-17 09:23:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 09:23:04]  is_tar=False
[2024-05-17 09:23:04]  lfn=log.38776104._012931.job.log.tgz.1
[2024-05-17 09:23:04]  mtime=0
[2024-05-17 09:23:04]  protocol_id=None
[2024-05-17 09:23:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 09:23:04]  replicas=None
[2024-05-17 09:23:04]  scope=mc23_13p6TeV
[2024-05-17 09:23:04]  status=None
[2024-05-17 09:23:04]  status_code=0
[2024-05-17 09:23:04]  storage_token=
[2024-05-17 09:23:04]  surl=/home/boinc/slots/0/PanDA_Pilot-6207846334/log.38776104._012931.job.log.tgz.1
[2024-05-17 09:23:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/b9/log.38776104._012931.job.log.tgz.1
[2024-05-17 09:23:04]  workdir=None
[2024-05-17 09:23:04] ]
[2024-05-17 09:23:04] 2024-05-17 16:22:33,768 | INFO     | transferring file log.38776104._012931.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207846334/log.38776104._012931.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 09:23:04] 2024-05-17 16:22:33,768 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207846334/log.38776104._012931.job.log.tgz.1 /home/boinc/slots/0/log.38776104._012931.job.log.t
[2024-05-17 09:23:04] 2024-05-17 16:22:33,790 | INFO     | adding to output.list: log.38776104._012931.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/26/b9/log.38776104._012931.job.log.tg
[2024-05-17 09:23:04] 2024-05-17 16:22:33,790 | INFO     | summary of transferred files:
[2024-05-17 09:23:04] 2024-05-17 16:22:33,790 | INFO     |  -- lfn=log.38776104._012931.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 09:23:04] 2024-05-17 16:22:33,791 | INFO     | stage-out finished correctly
[2024-05-17 09:23:04] 2024-05-17 16:22:34,831 | WARNING  | process 151781 is no longer using CPU - aborting
[2024-05-17 09:23:04] 2024-05-17 16:22:34,832 | INFO     | will not send any job update
[2024-05-17 09:23:04] 2024-05-17 16:22:37,234 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 09:23:04] 2024-05-17 16:22:37,334 | INFO     | monitor loop #316: job 0:6207846334 is in state 'finished'
[2024-05-17 09:23:04] 2024-05-17 16:22:37,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 09:23:04] 2024-05-17 16:22:39,081 | INFO     | job 6207846334 has state=finished
[2024-05-17 09:23:04] 2024-05-17 16:22:39,081 | INFO     | preparing for final server update for job 6207846334 in state='finished'
[2024-05-17 09:23:04] 2024-05-17 16:22:39,375 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-17 09:23:04] 2024-05-17 16:22:39,376 | INFO     | this job has now completed (state=finished)
[2024-05-17 09:23:04] 2024-05-17 16:22:39,376 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 09:23:04] 2024-05-17 16:22:39,376 | INFO     | job 6207846334 has finished - writing final server update
[2024-05-17 09:23:04] 2024-05-17 16:22:39,376 | INFO     | total number of processed events: 400 (read)
[2024-05-17 09:23:04] 2024-05-17 16:22:39,379 | INFO     | executing command: lscpu
[2024-05-17 09:23:04] 2024-05-17 16:22:39,420 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 09:23:04] 2024-05-17 16:22:39,420 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 09:23:04] 2024-05-17 16:22:39,463 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 09:23:04] 2024-05-17 16:22:39,838 | INFO     | monitor loop #317: job 0:6207846334 is in state 'finished'
[2024-05-17 09:23:04] 2024-05-17 16:22:39,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 09:23:04] 2024-05-17 16:22:42,341 | INFO     | monitor loop #318: job 0:6207846334 is in state 'finished'
[2024-05-17 09:23:04] 2024-05-17 16:22:42,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 09:23:04] 2024-05-17 16:22:43,146 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 09:23:04] 2024-05-17 16:22:43,147 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207846334/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 09:23:04] 2024-05-17 16:22:43,147 | INFO     | extracted standard info from prmon json
[2024-05-17 09:23:04] 2024-05-17 16:22:43,147 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 09:23:04] 2024-05-17 16:22:43,148 | WARNING  | GPU info not found in prmon json
[2024-05-17 09:23:04] 2024-05-17 16:22:43,148 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 09:23:04] 2024-05-17 16:22:43,148 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 09:23:04] 2024-05-17 16:22:43,149 | INFO     | fitting pss+swap vs Time
[2024-05-17 09:23:04] 2024-05-17 16:22:43,149 | INFO     | model: linear, x: [1715959166.0, 1715959227.0, 1715959288.0, 1715959349.0, 1715959410.0, 1715959471.0, 1715959532.0, 1715959593.0, 1715959654.0, 1715959715.0, 1715
[2024-05-17 09:23:04] 2024-05-17 16:22:43,150 | INFO     | sum of square deviations: 70364110.0
[2024-05-17 09:23:04] 2024-05-17 16:22:43,150 | INFO     | sum of deviations: 23488938587.0
[2024-05-17 09:23:04] 2024-05-17 16:22:43,150 | INFO     | mean x: 1715960996.0
[2024-05-17 09:23:04] 2024-05-17 16:22:43,150 | INFO     | mean y: 2587261.0
[2024-05-17 09:23:04] 2024-05-17 16:22:43,150 | INFO     | -- intersect: -572819302374.6588
[2024-05-17 09:23:04] 2024-05-17 16:22:43,150 | INFO     | intersect: -572819302374.6588
[2024-05-17 09:23:04] 2024-05-17 16:22:43,150 | INFO     | chi2: 2.690962102232814
[2024-05-17 09:23:04] 2024-05-17 16:22:43,150 | INFO     | -- intersect: -572819302374.6588
[2024-05-17 09:23:04] 2024-05-17 16:22:43,150 | INFO     | current memory leak: 333.82 B/s (using 61 data points, chi2=2.69)
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | ..............................
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | . Timing measurements:
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | . get job = 0 s
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | . initial setup = 1 s
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | . payload setup = 5 s
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | . stage-in = 0 s
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | . payload execution = 4093 s
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | . stage-out = 0 s
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | . log creation = 0 s
[2024-05-17 09:23:04] 2024-05-17 16:22:43,151 | INFO     | ..............................
[2024-05-17 09:23:04] 2024-05-17 16:22:43,217 | INFO     | 
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | job summary report
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | --------------------------------------------------
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | PanDA job id: 6207846334
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | task id: 38776104
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | errors: (none)
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | pilot state: finished 
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | transexitcode: 0
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | exeerrorcode: 0
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | exeerrordiag: 
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | exitcode: 0
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | exitmsg: OK
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | cpuconsumptiontime: 35906 s
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | nevents: 400
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | neventsw: 0
[2024-05-17 09:23:04] 2024-05-17 16:22:43,218 | INFO     | pid: 151781
[2024-05-17 09:23:04] 2024-05-17 16:22:43,219 | INFO     | pgrp: 151781
[2024-05-17 09:23:04] 2024-05-17 16:22:43,219 | INFO     | corecount: 12
[2024-05-17 09:23:04] 2024-05-17 16:22:43,219 | INFO     | event service: False
[2024-05-17 09:23:04] 2024-05-17 16:22:43,219 | INFO     | sizes: {0: 2391983, 1: 2392182, 5: 2392388, 11: 2392444, 4102: 2418312, 4103: 2427266, 4107: 2427450, 4112: 2427620}
[2024-05-17 09:23:04] 2024-05-17 16:22:43,219 | INFO     | --------------------------------------------------
[2024-05-17 09:23:04] 2024-05-17 16:22:43,219 | INFO     | 
[2024-05-17 09:23:04] 2024-05-17 16:22:43,219 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 09:23:04] 2024-05-17 16:22:43,240 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,241 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | job 6207846334 has completed (purged errors)
[2024-05-17 09:23:04] 2024-05-17 16:22:43,242 | INFO     | overall cleanup function is called
[2024-05-17 09:23:04] 2024-05-17 16:22:44,249 | INFO     | --- collectZombieJob: --- 10, [151781]
[2024-05-17 09:23:04] 2024-05-17 16:22:44,249 | INFO     | zombie collector waiting for pid 151781
[2024-05-17 09:23:04] 2024-05-17 16:22:44,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 09:23:04] 2024-05-17 16:22:45,254 | INFO     | collected zombie processes
[2024-05-17 09:23:04] 2024-05-17 16:22:45,254 | INFO     | will now attempt to kill all subprocesses of pid=151781
[2024-05-17 09:23:04] 2024-05-17 16:22:45,480 | INFO     | process IDs to be killed: [151781] (in reverse order)
[2024-05-17 09:23:04] 2024-05-17 16:22:45,623 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 09:23:04] 2024-05-17 16:22:45,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 09:23:04] 2024-05-17 16:22:45,633 | INFO     | did not find any defunct processes belonging to 151781
[2024-05-17 09:23:04] 2024-05-17 16:22:45,640 | INFO     | did not find any defunct processes belonging to 151781
[2024-05-17 09:23:04] 2024-05-17 16:22:45,641 | INFO     | ready for new job
[2024-05-17 09:23:04] 2024-05-17 16:22:45,641 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 09:23:04] 2024-05-17 16:22:45,642 | INFO     | *************************************
[2024-05-17 09:23:04] 2024-05-17 16:22:45,642 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 09:23:04] 2024-05-17 16:22:45,642 | INFO     | *************************************
[2024-05-17 09:23:04] 2024-05-17 16:22:45,642 | INFO     | 
[2024-05-17 09:23:04] 2024-05-17 16:22:45,645 | INFO     | architecture information:
[2024-05-17 09:23:04] 2024-05-17 16:22:45,645 | INFO     | executing command: cat /etc/os-release
[2024-05-17 09:23:04] 2024-05-17 16:22:45,665 | INFO     | cat /etc/os-release:
[2024-05-17 09:23:04] NAME="CentOS Linux"
[2024-05-17 09:23:04] VERSION="7 (Core)"
[2024-05-17 09:23:04] ID="centos"
[2024-05-17 09:23:04] ID_LIKE="rhel fedora"
[2024-05-17 09:23:04] VERSION_ID="7"
[2024-05-17 09:23:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 09:23:04] ANSI_COLOR="0;31"
[2024-05-17 09:23:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 09:23:04] HOME_URL="https://www.centos.org/"
[2024-05-17 09:23:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 09:23:04] 
[2024-05-17 09:23:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 09:23:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 09:23:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 09:23:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 09:23:04] 
[2024-05-17 09:23:04] 2024-05-17 16:22:45,666 | INFO     | *************************************
[2024-05-17 09:23:04] 2024-05-17 16:22:46,169 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 09:23:04] 2024-05-17 16:22:46,194 | INFO     | sufficient remaining disk space (2082655436800 B)
[2024-05-17 09:23:04] 2024-05-17 16:22:46,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 09:23:04] 2024-05-17 16:22:46,194 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 09:23:04] 2024-05-17 16:22:46,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:23:04] 2024-05-17 16:22:46,195 | INFO     | aborting loop
[2024-05-17 09:23:04] 2024-05-17 16:22:46,203 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 09:23:04] 2024-05-17 16:22:46,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 09:23:04] 2024-05-17 16:22:46,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 09:23:04] 2024-05-17 16:22:46,532 | INFO     | all data control threads have been joined
[2024-05-17 09:23:04] 2024-05-17 16:22:46,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 09:23:04] 2024-05-17 16:22:47,199 | INFO     | [job] retrieve thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:47,200 | INFO     | [job] job monitor thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:47,406 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:47,436 | INFO     | all job control threads have been joined
[2024-05-17 09:23:04] 2024-05-17 16:22:47,523 | INFO     | all payload control threads have been joined
[2024-05-17 09:23:04] 2024-05-17 16:22:47,537 | INFO     | [data] control thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:47,710 | INFO     | [payload] failed_post thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:47,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 09:23:04] 2024-05-17 16:22:48,055 | INFO     | [job] validate thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:48,067 | INFO     | [data] copytool_in thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:48,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:23:04] 2024-05-17 16:22:48,367 | INFO     | [payload] validate_post thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:48,441 | INFO     | [job] control thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:48,525 | INFO     | [payload] control thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:48,618 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:48,619 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:48,872 | INFO     | [data] copytool_out thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:49,233 | INFO     | [job] queue monitor thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:51,831 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:57,100 | INFO     | job.realtimelogging is not enabled
[2024-05-17 09:23:04] 2024-05-17 16:22:58,104 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 09:23:04] 2024-05-17 16:22:58,453 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140092048881472)>', '<ExcThread(monitor, started 140091498428160)>']
[2024-05-17 09:23:04] 2024-05-17 16:22:59,244 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 09:23:04] 2024-05-17 16:22:59,244 | INFO     | [monitor] control thread has ended
[2024-05-17 09:23:04] 2024-05-17 16:23:03,465 | INFO     | all workflow threads have been joined
[2024-05-17 09:23:04] 2024-05-17 16:23:03,465 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 09:23:04] 2024-05-17 16:23:03,466 | INFO     | traces error code: 0
[2024-05-17 09:23:04] 2024-05-17 16:23:03,466 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 09:23:04] 2024-05-17 16:23:03,574 [wrapper] ==== pilot stdout END ====
[2024-05-17 09:23:04] 2024-05-17 16:23:03,576 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 09:23:04] 2024-05-17 16:23:03,579 [wrapper] pilotpid: 145223
[2024-05-17 09:23:04] 2024-05-17 16:23:03,581 [wrapper] Pilot exit status: 0
[2024-05-17 09:23:04] 2024-05-17 16:23:03,591 [wrapper] pandaids: 6207846334
[2024-05-17 09:23:04] 2024-05-17 16:23:03,671 [wrapper] cleanup: SIGTERM to supervisor_pilot 163729 145224
[2024-05-17 09:23:04] 2024-05-17 16:23:03,675 [wrapper] Test setup, not cleaning
[2024-05-17 09:23:04] 2024-05-17 16:23:03,677 [wrapper] ==== wrapper stdout END ====
[2024-05-17 09:23:04] 2024-05-17 16:23:03,680 [wrapper] ==== wrapper stderr END ====
[2024-05-17 09:23:04] 2024-05-17 16:23:03,686 [wrapper] apfmon messages muted
[2024-05-17 09:23:04]  *** Error codes and diagnostics ***
[2024-05-17 09:23:04]     "exeErrorCode": 0,
[2024-05-17 09:23:04]     "exeErrorDiag": "",
[2024-05-17 09:23:04]     "pilotErrorCode": 0,
[2024-05-17 09:23:04]     "pilotErrorDiag": "",
[2024-05-17 09:23:04]  *** Listing of results directory ***
[2024-05-17 09:23:04] total 820412
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc    467845 May 17 00:29 pilot3.tar.gz
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc      5633 May 17 00:52 queuedata.json
[2024-05-17 09:23:04] -rwx------ 1 boinc boinc     32251 May 17 00:52 runpilot2-wrapper.sh
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc       100 May 17 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 09:23:04] -rwxr-xr-x 1 boinc boinc      7986 May 17 08:13 run_atlas
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc       105 May 17 08:13 job.xml
[2024-05-17 09:23:04] -rw-r--r-- 2 boinc boinc 601409084 May 17 08:13 EVNT.38776100._000464.pool.root.1
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc      6622 May 17 08:13 init_data.xml
[2024-05-17 09:23:04] -rw-r--r-- 2 boinc boinc     17537 May 17 08:13 start_atlas.sh
[2024-05-17 09:23:04] drwxrwx--x 2 boinc boinc      4096 May 17 08:13 shared
[2024-05-17 09:23:04] -rw-r--r-- 2 boinc boinc    480002 May 17 08:13 input.tar.gz
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc         0 May 17 08:13 boinc_lockfile
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc      2644 May 17 08:13 pandaJob.out
[2024-05-17 09:23:04] -rw------- 1 boinc boinc       424 May 17 08:13 setup.sh.local
[2024-05-17 09:23:04] -rw------- 1 boinc boinc   1019402 May 17 08:13 agis_schedconf.cvmfs.json
[2024-05-17 09:23:04] -rw------- 1 boinc boinc         0 May 17 08:13 agis_ddmendpoints.agis.ALL.json
[2024-05-17 09:23:04] -rw------- 1 boinc boinc   1324701 May 17 08:13 cric_ddmendpoints.json
[2024-05-17 09:23:04] drwx------ 4 boinc boinc      4096 May 17 08:13 pilot3
[2024-05-17 09:23:04] -rw------- 1 boinc boinc 233620766 May 17 09:21 HITS.38776104._012931.pool.root.1
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc       530 May 17 09:21 boinc_task_state.xml
[2024-05-17 09:23:04] -rw------- 1 boinc boinc        95 May 17 09:22 pilot_heartbeat.json
[2024-05-17 09:23:04] -rw------- 1 boinc boinc      1055 May 17 09:22 memory_monitor_summary.json
[2024-05-17 09:23:04] -rw------- 1 boinc boinc    356590 May 17 09:22 log.38776104._012931.job.log.tgz.1
[2024-05-17 09:23:04] -rw------- 1 boinc boinc      7772 May 17 09:22 heartbeat.json
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc      8192 May 17 09:22 boinc_mmap_file
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc        27 May 17 09:23 wrapper_checkpoint.txt
[2024-05-17 09:23:04] -rw------- 1 boinc boinc      4282 May 17 09:23 pilotlog.txt
[2024-05-17 09:23:04] -rw------- 1 boinc boinc    408649 May 17 09:23 log.38776104._012931.job.log.1
[2024-05-17 09:23:04] -rw------- 1 boinc boinc       357 May 17 09:23 output.list
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc       620 May 17 09:23 runtime_log
[2024-05-17 09:23:04] -rw------- 1 boinc boinc    788480 May 17 09:23 result.tar.gz
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc     11286 May 17 09:23 runtime_log.err
[2024-05-17 09:23:04] -rw------- 1 boinc boinc       654 May 17 09:23 itoMDmmZ7R5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmt2KKDmbHOZtn.diag
[2024-05-17 09:23:04] -rw-r--r-- 1 boinc boinc     21789 May 17 09:23 stderr.txt
[2024-05-17 09:23:04] HITS file was successfully produced:
[2024-05-17 09:23:04] -rw------- 1 boinc boinc 233620766 May 17 09:21 shared/HITS.pool.root.1
[2024-05-17 09:23:04]  *** Contents of shared directory: ***
[2024-05-17 09:23:04] total 816736
[2024-05-17 09:23:04] -rw-r--r-- 2 boinc boinc 601409084 May 17 08:13 ATLAS.root_0
[2024-05-17 09:23:04] -rw-r--r-- 2 boinc boinc     17537 May 17 08:13 start_atlas.sh
[2024-05-17 09:23:04] -rw-r--r-- 2 boinc boinc    480002 May 17 08:13 input.tar.gz
[2024-05-17 09:23:04] -rw------- 1 boinc boinc 233620766 May 17 09:21 HITS.pool.root.1
[2024-05-17 09:23:04] -rw------- 1 boinc boinc    788480 May 17 09:23 result.tar.gz
09:23:06 (140981): run_atlas exited; CPU time 35527.288868
09:23:06 (140981): called boinc_finish(0)

</stderr_txt>
]]>

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