Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:04:15 (2827705): wrapper (7.7.26015): starting
05:04:15 (2827705): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 05:04:15] Arguments: --nthreads 4
[2024-05-20 05:04:15] Threads: 4
[2024-05-20 05:04:15] Checking for CVMFS
[2024-05-20 05:04:15] No cvmfs_config command found, will try listing directly
[2024-05-20 05:04:15] CVMFS is ok
[2024-05-20 05:04:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 05:04:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 05:04:15] Further information can be found at the LHC@home message board.
[2024-05-20 05:04:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 05:04:15] Checking for apptainer binary...
[2024-05-20 05:04:15] which: no apptainer in ((null))
[2024-05-20 05:04:15] apptainer is not installed, using version from CVMFS
[2024-05-20 05:04:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 05:04:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-05-20 05:04:16] apptainer works
[2024-05-20 05:04:16] Set ATHENA_PROC_NUMBER=4
[2024-05-20 05:04:16] Set ATHENA_CORE_NUMBER=4
[2024-05-20 05:04:16] Starting ATLAS job with PandaID=6207834158
[2024-05-20 05:04:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 13:15:28]  *** The last 200 lines of the pilot log: ***
[2024-05-20 13:15:28] 2024-05-20 11:15:10,578 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 13:15:28] 2024-05-20 11:15:10,578 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 13:15:28] 2024-05-20 11:15:10,583 | INFO     | fitting pss+swap vs Time
[2024-05-20 13:15:28] 2024-05-20 11:15:10,584 | INFO     | model: linear, x: [1716174291.0, 1716174352.0, 1716174413.0, 1716174474.0, 1716174535.0, 1716174596.0, 1716174657.0, 1716174718.0, 1716174779.0, 1716174840.0, 1716
[2024-05-20 13:15:28] 2024-05-20 11:15:10,584 | INFO     | sum of square deviations: 34939602082.0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,587 | INFO     | sum of deviations: 224521853564.0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,587 | INFO     | mean x: 1716188992.0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,587 | INFO     | mean y: 2311673.9565217393
[2024-05-20 13:15:28] 2024-05-20 11:15:10,587 | INFO     | -- intersect: -11025917343.811281
[2024-05-20 13:15:28] 2024-05-20 11:15:10,587 | INFO     | intersect: -11025917343.811281
[2024-05-20 13:15:28] 2024-05-20 11:15:10,588 | INFO     | chi2: 4.7403304961508095
[2024-05-20 13:15:28] 2024-05-20 11:15:10,588 | INFO     | model: linear, x: [1716174291.0, 1716174352.0, 1716174413.0, 1716174474.0, 1716174535.0, 1716174596.0, 1716174657.0, 1716174718.0, 1716174779.0, 1716174840.0, 1716
[2024-05-20 13:15:28] 2024-05-20 11:15:10,588 | INFO     | sum of square deviations: 33865712179.5
[2024-05-20 13:15:28] 2024-05-20 11:15:10,591 | INFO     | sum of deviations: 251651251288.99997
[2024-05-20 13:15:28] 2024-05-20 11:15:10,591 | INFO     | mean x: 1716188839.5
[2024-05-20 13:15:28] 2024-05-20 11:15:10,591 | INFO     | mean y: 2315491.020920502
[2024-05-20 13:15:28] 2024-05-20 11:15:10,591 | INFO     | -- intersect: -12750437695.425375
[2024-05-20 13:15:28] 2024-05-20 11:15:10,591 | INFO     | intersect: -12750437695.425375
[2024-05-20 13:15:28] 2024-05-20 11:15:10,592 | INFO     | chi2: 3.992621041185995
[2024-05-20 13:15:28] 2024-05-20 11:15:10,592 | INFO     | current chi2=3.992621041185995 (change=15.773361278753907 %)
[2024-05-20 13:15:28] 2024-05-20 11:15:10,592 | INFO     | right removable region: 477
[2024-05-20 13:15:28] 2024-05-20 11:15:10,592 | INFO     | model: linear, x: [1716174596.0, 1716174657.0, 1716174718.0, 1716174779.0, 1716174840.0, 1716174901.0, 1716174962.0, 1716175023.0, 1716175084.0, 1716175145.0, 1716
[2024-05-20 13:15:28] 2024-05-20 11:15:10,592 | INFO     | sum of square deviations: 33865712179.5
[2024-05-20 13:15:28] 2024-05-20 11:15:10,595 | INFO     | sum of deviations: 114447194598.00005
[2024-05-20 13:15:28] 2024-05-20 11:15:10,595 | INFO     | mean x: 1716189144.5
[2024-05-20 13:15:28] 2024-05-20 11:15:10,595 | INFO     | mean y: 2327285.8033472802
[2024-05-20 13:15:28] 2024-05-20 11:15:10,595 | INFO     | -- intersect: -5797433603.514723
[2024-05-20 13:15:28] 2024-05-20 11:15:10,595 | INFO     | intersect: -5797433603.514723
[2024-05-20 13:15:28] 2024-05-20 11:15:10,596 | INFO     | chi2: 2.4356885592238164
[2024-05-20 13:15:28] 2024-05-20 11:15:10,596 | INFO     | current chi2=2.4356885592238164 (change=48.61774804095164 %)
[2024-05-20 13:15:28] 2024-05-20 11:15:10,596 | INFO     | model: linear, x: [1716174901.0, 1716174962.0, 1716175023.0, 1716175084.0, 1716175145.0, 1716175206.0, 1716175267.0, 1716175328.0, 1716175389.0, 1716175450.0, 1716
[2024-05-20 13:15:28] 2024-05-20 11:15:10,596 | INFO     | sum of square deviations: 32814055252.0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,599 | INFO     | sum of deviations: 20152669308.000008
[2024-05-20 13:15:28] 2024-05-20 11:15:10,599 | INFO     | mean x: 1716189297.0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,599 | INFO     | mean y: 2340963.065539112
[2024-05-20 13:15:28] 2024-05-20 11:15:10,599 | INFO     | -- intersect: -1051652367.1328678
[2024-05-20 13:15:28] 2024-05-20 11:15:10,599 | INFO     | intersect: -1051652367.1328678
[2024-05-20 13:15:28] 2024-05-20 11:15:10,599 | INFO     | chi2: 0.8889509203375776
[2024-05-20 13:15:28] 2024-05-20 11:15:10,599 | INFO     | current chi2=0.8889509203375776 (change=63.50309578902564 %)
[2024-05-20 13:15:28] 2024-05-20 11:15:10,600 | INFO     | model: linear, x: [1716175206.0, 1716175267.0, 1716175328.0, 1716175389.0, 1716175450.0, 1716175511.0, 1716175572.0, 1716175633.0, 1716175694.0, 1716175755.0, 1716
[2024-05-20 13:15:28] 2024-05-20 11:15:10,600 | INFO     | sum of square deviations: 31784398737.0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | sum of deviations: -1932429339.5000038
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | mean x: 1716189449.5
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | mean y: 2344225.685897436
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | -- intersect: 106685190.94359615
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | intersect: 106685190.94359615
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | chi2: 0.7796233253082522
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | current chi2=0.7796233253082522 (change=12.29849618557214 %)
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | left removable region: 30
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | model: linear, x: [1716176121.0, 1716176182.0, 1716176243.0, 1716176304.0, 1716176365.0, 1716176426.0, 1716176487.0, 1716176548.0, 1716176609.0, 1716176670.0, 1716
[2024-05-20 13:15:28] 2024-05-20 11:15:10,603 | INFO     | sum of square deviations: 27694837408.0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,606 | INFO     | sum of deviations: 14627826901.0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,606 | INFO     | mean x: 1716189724.0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,606 | INFO     | mean y: 2350373.7673378075
[2024-05-20 13:15:28] 2024-05-20 11:15:10,606 | INFO     | -- intersect: -904104711.7821201
[2024-05-20 13:15:28] 2024-05-20 11:15:10,606 | INFO     | intersect: -904104711.7821201
[2024-05-20 13:15:28] 2024-05-20 11:15:10,606 | INFO     | chi2: 0.00247658887497452
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | -- intersect: -904104711.7821201
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | current memory leak: 0.53 B/s (using 447 data points, chi2=0.00)
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | ..............................
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | . Timing measurements:
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | . get job = 0 s
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | . initial setup = 1 s
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | . payload setup = 5 s
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | . stage-in = 0 s
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | . payload execution = 29410 s
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | . stage-out = 1 s
[2024-05-20 13:15:28] 2024-05-20 11:15:10,607 | INFO     | . log creation = 0 s
[2024-05-20 13:15:28] 2024-05-20 11:15:10,608 | INFO     | ..............................
[2024-05-20 13:15:28] 2024-05-20 11:15:10,660 | INFO     | 
[2024-05-20 13:15:28] 2024-05-20 11:15:10,661 | INFO     | job summary report
[2024-05-20 13:15:28] 2024-05-20 11:15:10,661 | INFO     | --------------------------------------------------
[2024-05-20 13:15:28] 2024-05-20 11:15:10,661 | INFO     | PanDA job id: 6207834158
[2024-05-20 13:15:28] 2024-05-20 11:15:10,661 | INFO     | task id: 38921013
[2024-05-20 13:15:28] 2024-05-20 11:15:10,661 | INFO     | errors: (none)
[2024-05-20 13:15:28] 2024-05-20 11:15:10,661 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 13:15:28] 2024-05-20 11:15:10,661 | INFO     | pilot state: finished 
[2024-05-20 13:15:28] 2024-05-20 11:15:10,661 | INFO     | transexitcode: 0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,662 | INFO     | exeerrorcode: 0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,662 | INFO     | exeerrordiag: 
[2024-05-20 13:15:28] 2024-05-20 11:15:10,662 | INFO     | exitcode: 0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,662 | INFO     | exitmsg: OK
[2024-05-20 13:15:28] 2024-05-20 11:15:10,662 | INFO     | cpuconsumptiontime: 114524 s
[2024-05-20 13:15:28] 2024-05-20 11:15:10,662 | INFO     | nevents: 400
[2024-05-20 13:15:28] 2024-05-20 11:15:10,662 | INFO     | neventsw: 0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,662 | INFO     | pid: 2845616
[2024-05-20 13:15:28] 2024-05-20 11:15:10,662 | INFO     | pgrp: 2845616
[2024-05-20 13:15:28] 2024-05-20 11:15:10,663 | INFO     | corecount: 4
[2024-05-20 13:15:28] 2024-05-20 11:15:10,663 | INFO     | event service: False
[2024-05-20 13:15:28] 2024-05-20 11:15:10,663 | INFO     | sizes: {0: 2390597, 1: 2392144, 5: 2392350, 12: 2392406, 29420: 2430198, 29422: 2439180, 29426: 2439364, 29431: 2439534}
[2024-05-20 13:15:28] 2024-05-20 11:15:10,663 | INFO     | --------------------------------------------------
[2024-05-20 13:15:28] 2024-05-20 11:15:10,663 | INFO     | 
[2024-05-20 13:15:28] 2024-05-20 11:15:10,663 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2024-05-20 13:15:28] 2024-05-20 11:15:10,689 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | job 6207834158 has completed (purged errors)
[2024-05-20 13:15:28] 2024-05-20 11:15:10,691 | INFO     | overall cleanup function is called
[2024-05-20 13:15:28] 2024-05-20 11:15:11,699 | INFO     | --- collectZombieJob: --- 10, [2845616]
[2024-05-20 13:15:28] 2024-05-20 11:15:11,699 | INFO     | zombie collector waiting for pid 2845616
[2024-05-20 13:15:28] 2024-05-20 11:15:11,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 13:15:28] 2024-05-20 11:15:12,704 | INFO     | collected zombie processes
[2024-05-20 13:15:28] 2024-05-20 11:15:12,705 | INFO     | will now attempt to kill all subprocesses of pid=2845616
[2024-05-20 13:15:28] 2024-05-20 11:15:12,903 | INFO     | process IDs to be killed: [2845616] (in reverse order)
[2024-05-20 13:15:28] 2024-05-20 11:15:13,050 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 13:15:28] 2024-05-20 11:15:13,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 13:15:28] 2024-05-20 11:15:13,061 | INFO     | did not find any defunct processes belonging to 2845616
[2024-05-20 13:15:28] 2024-05-20 11:15:13,070 | INFO     | did not find any defunct processes belonging to 2845616
[2024-05-20 13:15:28] 2024-05-20 11:15:13,071 | INFO     | ready for new job
[2024-05-20 13:15:28] 2024-05-20 11:15:13,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 13:15:28] 2024-05-20 11:15:13,074 | INFO     | *************************************
[2024-05-20 13:15:28] 2024-05-20 11:15:13,074 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 13:15:28] 2024-05-20 11:15:13,075 | INFO     | *************************************
[2024-05-20 13:15:28] 2024-05-20 11:15:13,075 | INFO     | 
[2024-05-20 13:15:28] 2024-05-20 11:15:13,079 | INFO     | architecture information:
[2024-05-20 13:15:28] 2024-05-20 11:15:13,079 | INFO     | executing command: cat /etc/os-release
[2024-05-20 13:15:28] 2024-05-20 11:15:13,096 | INFO     | cat /etc/os-release:
[2024-05-20 13:15:28] NAME="CentOS Linux"
[2024-05-20 13:15:28] VERSION="7 (Core)"
[2024-05-20 13:15:28] ID="centos"
[2024-05-20 13:15:28] ID_LIKE="rhel fedora"
[2024-05-20 13:15:28] VERSION_ID="7"
[2024-05-20 13:15:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 13:15:28] ANSI_COLOR="0;31"
[2024-05-20 13:15:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 13:15:28] HOME_URL="https://www.centos.org/"
[2024-05-20 13:15:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 13:15:28] 
[2024-05-20 13:15:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 13:15:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 13:15:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 13:15:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 13:15:28] 
[2024-05-20 13:15:28] 2024-05-20 11:15:13,096 | INFO     | *************************************
[2024-05-20 13:15:28] 2024-05-20 11:15:13,600 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2024-05-20 13:15:28] 2024-05-20 11:15:13,627 | INFO     | sufficient remaining disk space (594982993920 B)
[2024-05-20 13:15:28] 2024-05-20 11:15:13,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 13:15:28] 2024-05-20 11:15:13,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 13:15:28] 2024-05-20 11:15:13,628 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 13:15:28] 2024-05-20 11:15:13,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 13:15:28] 2024-05-20 11:15:13,629 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 13:15:28] 2024-05-20 11:15:13,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 13:15:28] 2024-05-20 11:15:13,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 13:15:28] 2024-05-20 11:15:13,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 13:15:28] 2024-05-20 11:15:13,725 | INFO     | aborting loop
[2024-05-20 13:15:28] 2024-05-20 11:15:13,993 | INFO     | all job control threads have been joined
[2024-05-20 13:15:28] 2024-05-20 11:15:14,097 | INFO     | all data control threads have been joined
[2024-05-20 13:15:28] 2024-05-20 11:15:14,634 | INFO     | [job] retrieve thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:14,730 | INFO     | [job] job monitor thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:14,802 | INFO     | [job] validate thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:14,998 | INFO     | [job] control thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:15,078 | INFO     | all payload control threads have been joined
[2024-05-20 13:15:28] 2024-05-20 11:15:15,102 | INFO     | [data] control thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:15,169 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:15,265 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:15,377 | INFO     | [payload] failed_post thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:15,561 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:15,636 | INFO     | [data] copytool_out thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:15,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 13:15:28] 2024-05-20 11:15:15,854 | INFO     | [payload] validate_post thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:15,911 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:16,049 | INFO     | [data] copytool_in thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:16,083 | INFO     | [payload] control thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:16,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 13:15:28] 2024-05-20 11:15:16,677 | INFO     | [job] queue monitor thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:20,341 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 13:15:28] 2024-05-20 11:15:22,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47557733024832)>', '<ExcThread(monitor, started 47558309185280)>']
[2024-05-20 13:15:28] 2024-05-20 11:15:22,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 13:15:28] 2024-05-20 11:15:22,674 | INFO     | [monitor] control thread has ended
[2024-05-20 13:15:28] 2024-05-20 11:15:27,344 | INFO     | all workflow threads have been joined
[2024-05-20 13:15:28] 2024-05-20 11:15:27,344 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 13:15:28] 2024-05-20 11:15:27,345 | INFO     | traces error code: 0
[2024-05-20 13:15:28] 2024-05-20 11:15:27,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 13:15:28] 2024-05-20 11:15:27,456 [wrapper] ==== pilot stdout END ====
[2024-05-20 13:15:28] 2024-05-20 11:15:27,459 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 13:15:28] 2024-05-20 11:15:27,461 [wrapper] pilotpid: 2832060
[2024-05-20 13:15:28] 2024-05-20 11:15:27,464 [wrapper] Pilot exit status: 0
[2024-05-20 13:15:28] 2024-05-20 11:15:27,472 [wrapper] pandaids: 6207834158
[2024-05-20 13:15:28] 2024-05-20 11:15:27,553 [wrapper] cleanup: SIGTERM to supervisor_pilot 4178592 2832061
[2024-05-20 13:15:28] 2024-05-20 11:15:27,556 [wrapper] Test setup, not cleaning
[2024-05-20 13:15:28] 2024-05-20 11:15:27,559 [wrapper] ==== wrapper stdout END ====
[2024-05-20 13:15:28] 2024-05-20 11:15:27,562 [wrapper] ==== wrapper stderr END ====
[2024-05-20 13:15:28] 2024-05-20 11:15:27,568 [wrapper] apfmon messages muted
[2024-05-20 13:15:28]  *** Error codes and diagnostics ***
[2024-05-20 13:15:28]     "exeErrorCode": 0,
[2024-05-20 13:15:28]     "exeErrorDiag": "",
[2024-05-20 13:15:28]     "pilotErrorCode": 0,
[2024-05-20 13:15:28]     "pilotErrorDiag": "",
[2024-05-20 13:15:28]  *** Listing of results directory ***
[2024-05-20 13:15:28] total 872200
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc    467845 May 17 09:14 pilot3.tar.gz
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc      5633 May 17 09:19 queuedata.json
[2024-05-20 13:15:28] -rwx------ 1 boinc boinc     32251 May 17 09:20 runpilot2-wrapper.sh
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc       100 May 20 05:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 13:15:28] -rwxr-xr-x 1 boinc boinc      7986 May 20 05:04 run_atlas
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc       105 May 20 05:04 job.xml
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc      6663 May 20 05:04 init_data.xml
[2024-05-20 13:15:28] -rw-r--r-- 2 boinc boinc 538018684 May 20 05:04 EVNT.38776210._000070.pool.root.1
[2024-05-20 13:15:28] -rw-r--r-- 2 boinc boinc     17537 May 20 05:04 start_atlas.sh
[2024-05-20 13:15:28] drwxrwx--x 2 boinc boinc      4096 May 20 05:04 shared
[2024-05-20 13:15:28] -rw-r--r-- 2 boinc boinc    480000 May 20 05:04 input.tar.gz
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc         0 May 20 05:04 boinc_lockfile
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc      2640 May 20 05:04 pandaJob.out
[2024-05-20 13:15:28] -rw------- 1 boinc boinc       424 May 20 05:04 setup.sh.local
[2024-05-20 13:15:28] -rw------- 1 boinc boinc   1013685 May 20 05:04 agis_schedconf.cvmfs.json
[2024-05-20 13:15:28] -rw------- 1 boinc boinc   1324701 May 20 05:04 cric_ddmendpoints.json
[2024-05-20 13:15:28] drwx------ 4 boinc boinc      4096 May 20 05:04 pilot3
[2024-05-20 13:15:28] -rw------- 1 boinc boinc 343366320 May 20 13:14 HITS.38921013._001551.pool.root.1
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc       533 May 20 13:14 boinc_task_state.xml
[2024-05-20 13:15:28] -rw------- 1 boinc boinc        95 May 20 13:14 pilot_heartbeat.json
[2024-05-20 13:15:28] -rw------- 1 boinc boinc      1053 May 20 13:14 memory_monitor_summary.json
[2024-05-20 13:15:28] -rw------- 1 boinc boinc         0 May 20 13:15 agis_ddmendpoints.agis.ALL.json
[2024-05-20 13:15:28] -rw------- 1 boinc boinc    510271 May 20 13:15 log.38921013._001551.job.log.tgz.1
[2024-05-20 13:15:28] -rw------- 1 boinc boinc      7766 May 20 13:15 heartbeat.json
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc        29 May 20 13:15 wrapper_checkpoint.txt
[2024-05-20 13:15:28] -rw------- 1 boinc boinc      4344 May 20 13:15 pilotlog.txt
[2024-05-20 13:15:28] -rw------- 1 boinc boinc   3597998 May 20 13:15 log.38921013._001551.job.log.1
[2024-05-20 13:15:28] -rw------- 1 boinc boinc       357 May 20 13:15 output.list
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc       620 May 20 13:15 runtime_log
[2024-05-20 13:15:28] -rw------- 1 boinc boinc   4126720 May 20 13:15 result.tar.gz
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc     11410 May 20 13:15 runtime_log.err
[2024-05-20 13:15:28] -rw------- 1 boinc boinc       661 May 20 13:15 VthKDmo46R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmziQKDmtaYoSo.diag
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc      8192 May 20 13:15 boinc_mmap_file
[2024-05-20 13:15:28] -rw-r--r-- 1 boinc boinc     21360 May 20 13:15 stderr.txt
[2024-05-20 13:15:28] HITS file was successfully produced:
[2024-05-20 13:15:28] -rw------- 1 boinc boinc 343366320 May 20 13:14 shared/HITS.pool.root.1
[2024-05-20 13:15:28]  *** Contents of shared directory: ***
[2024-05-20 13:15:28] total 865264
[2024-05-20 13:15:28] -rw-r--r-- 2 boinc boinc 538018684 May 20 05:04 ATLAS.root_0
[2024-05-20 13:15:28] -rw-r--r-- 2 boinc boinc     17537 May 20 05:04 start_atlas.sh
[2024-05-20 13:15:28] -rw-r--r-- 2 boinc boinc    480000 May 20 05:04 input.tar.gz
[2024-05-20 13:15:28] -rw------- 1 boinc boinc 343366320 May 20 13:14 HITS.pool.root.1
[2024-05-20 13:15:28] -rw------- 1 boinc boinc   4126720 May 20 13:15 result.tar.gz
13:15:29 (2827705): run_atlas exited; CPU time 113698.745279
13:15:29 (2827705): called boinc_finish(0)

</stderr_txt>
]]>

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