Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:49:07 (43671): wrapper (7.7.26015): starting
07:49:07 (43671): wrapper: running run_atlas (--nthreads 8)
[2024-05-17 07:49:07] Arguments: --nthreads 8
[2024-05-17 07:49:07] Threads: 8
[2024-05-17 07:49:07] Checking for CVMFS
[2024-05-17 07:49:07] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 07:49:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 07:49:07] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 07:49:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 07:49:08] 2.11.2.0 29010 2182 103072 132840 0 159 18363555 18432001 21639 130560 0 16258750 98.599 47324473 54323 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-17 07:49:08] CVMFS is ok
[2024-05-17 07:49:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 07:49:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 07:49:08] Further information can be found at the LHC@home message board.
[2024-05-17 07:49:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 07:49:08] Checking for apptainer binary...
[2024-05-17 07:49:08] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 07:49:08] Running /usr/bin/apptainer --version
[2024-05-17 07:49:08] apptainer version 1.3.0-1.el7
[2024-05-17 07:49:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 07:49:10] c7-16-9.aglt2.org
[2024-05-17 07:49:10] apptainer works
[2024-05-17 07:49:10] Set ATHENA_PROC_NUMBER=8
[2024-05-17 07:49:10] Set ATHENA_CORE_NUMBER=8
[2024-05-17 07:49:10] Starting ATLAS job with PandaID=6207833562
[2024-05-17 07:49:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 20:28:41]  *** The last 200 lines of the pilot log: ***
[2024-05-17 20:28:41] 2024-05-18 00:28:03,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:28:41] 2024-05-18 00:28:06,262 | INFO     | monitor loop #3127: job 0:6207833562 is in state 'finished'
[2024-05-17 20:28:41] 2024-05-18 00:28:06,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:28:41] 2024-05-18 00:28:08,767 | INFO     | monitor loop #3128: job 0:6207833562 is in state 'finished'
[2024-05-17 20:28:41] 2024-05-18 00:28:08,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:28:41] 2024-05-18 00:28:11,274 | INFO     | monitor loop #3129: job 0:6207833562 is in state 'finished'
[2024-05-17 20:28:41] 2024-05-18 00:28:11,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:28:41] 2024-05-18 00:28:13,791 | INFO     | monitor loop #3130: job 0:6207833562 is in state 'finished'
[2024-05-17 20:28:41] 2024-05-18 00:28:13,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:28:41] 2024-05-18 00:28:16,295 | INFO     | monitor loop #3131: job 0:6207833562 is in state 'finished'
[2024-05-17 20:28:41] 2024-05-18 00:28:16,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:28:41] 2024-05-18 00:28:18,805 | INFO     | monitor loop #3132: job 0:6207833562 is in state 'finished'
[2024-05-17 20:28:41] 2024-05-18 00:28:18,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 20:28:41] 2024-05-18 00:28:21,104 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-17 20:28:41] 2024-05-18 00:28:21,105 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6207833562/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 20:28:41] 2024-05-18 00:28:21,105 | INFO     | extracted standard info from prmon json
[2024-05-17 20:28:41] 2024-05-18 00:28:21,105 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 20:28:41] 2024-05-18 00:28:21,105 | WARNING  | GPU info not found in prmon json
[2024-05-17 20:28:41] 2024-05-18 00:28:21,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 20:28:41] 2024-05-18 00:28:21,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 20:28:41] 2024-05-18 00:28:21,118 | INFO     | fitting pss+swap vs Time
[2024-05-17 20:28:41] 2024-05-18 00:28:21,119 | INFO     | model: linear, x: [1715946828.0, 1715946889.0, 1715946950.0, 1715947011.0, 1715947072.0, 1715947133.0, 1715947194.0, 1715947255.0, 1715947316.0, 1715947377.0, 1715
[2024-05-17 20:28:41] 2024-05-18 00:28:21,119 | INFO     | sum of square deviations: 126674503632.03232
[2024-05-17 20:28:41] 2024-05-18 00:28:21,128 | INFO     | sum of deviations: 1524736081062.591
[2024-05-17 20:28:41] 2024-05-18 00:28:21,129 | INFO     | mean x: 1715969428.5444744
[2024-05-17 20:28:41] 2024-05-18 00:28:21,129 | INFO     | mean y: 2452736.436657682
[2024-05-17 20:28:41] 2024-05-18 00:28:21,129 | INFO     | -- intersect: -20652062787.08424
[2024-05-17 20:28:41] 2024-05-18 00:28:21,129 | INFO     | intersect: -20652062787.08424
[2024-05-17 20:28:41] 2024-05-18 00:28:21,130 | INFO     | chi2: 17.889422321227425
[2024-05-17 20:28:41] 2024-05-18 00:28:21,130 | INFO     | model: linear, x: [1715946828.0, 1715946889.0, 1715946950.0, 1715947011.0, 1715947072.0, 1715947133.0, 1715947194.0, 1715947255.0, 1715947316.0, 1715947377.0, 1715
[2024-05-17 20:28:41] 2024-05-18 00:28:21,130 | INFO     | sum of square deviations: 124130921819.52234
[2024-05-17 20:28:41] 2024-05-18 00:28:21,141 | INFO     | sum of deviations: 1564089033301.2227
[2024-05-17 20:28:41] 2024-05-18 00:28:21,141 | INFO     | mean x: 1715969276.0447762
[2024-05-17 20:28:41] 2024-05-18 00:28:21,141 | INFO     | mean y: 2455079.265943012
[2024-05-17 20:28:41] 2024-05-18 00:28:21,141 | INFO     | -- intersect: -21619302713.250233
[2024-05-17 20:28:41] 2024-05-18 00:28:21,141 | INFO     | intersect: -21619302713.250233
[2024-05-17 20:28:41] 2024-05-18 00:28:21,142 | INFO     | chi2: 17.13634881396843
[2024-05-17 20:28:41] 2024-05-18 00:28:21,142 | INFO     | current chi2=17.13634881396843 (change=4.209602153365266 %)
[2024-05-17 20:28:41] 2024-05-18 00:28:21,142 | INFO     | right removable region: 736
[2024-05-17 20:28:41] 2024-05-18 00:28:21,143 | INFO     | model: linear, x: [1715947133.0, 1715947194.0, 1715947255.0, 1715947316.0, 1715947377.0, 1715947438.0, 1715947499.0, 1715947560.0, 1715947621.0, 1715947682.0, 1715
[2024-05-17 20:28:41] 2024-05-18 00:28:21,143 | INFO     | sum of square deviations: 124130901689.52234
[2024-05-17 20:28:41] 2024-05-18 00:28:21,152 | INFO     | sum of deviations: 1280023863740.4026
[2024-05-17 20:28:41] 2024-05-18 00:28:21,152 | INFO     | mean x: 1715969581.0447762
[2024-05-17 20:28:41] 2024-05-18 00:28:21,153 | INFO     | mean y: 2467403.805970149
[2024-05-17 20:28:41] 2024-05-18 00:28:21,153 | INFO     | -- intersect: -17692417458.01354
[2024-05-17 20:28:41] 2024-05-18 00:28:21,153 | INFO     | intersect: -17692417458.01354
[2024-05-17 20:28:41] 2024-05-18 00:28:21,153 | INFO     | chi2: 13.58731579677846
[2024-05-17 20:28:41] 2024-05-18 00:28:21,153 | INFO     | current chi2=13.58731579677846 (change=24.048325581447784 %)
[2024-05-17 20:28:41] 2024-05-18 00:28:21,153 | INFO     | left removable region: 10
[2024-05-17 20:28:41] 2024-05-18 00:28:21,154 | INFO     | model: linear, x: [1715947438.0, 1715947499.0, 1715947560.0, 1715947621.0, 1715947682.0, 1715947743.0, 1715947804.0, 1715947865.0, 1715947926.0, 1715947987.0, 1715
[2024-05-17 20:28:41] 2024-05-18 00:28:21,154 | INFO     | sum of square deviations: 118655338711.99985
[2024-05-17 20:28:41] 2024-05-18 00:28:21,164 | INFO     | sum of deviations: 1140933598950.545
[2024-05-17 20:28:41] 2024-05-18 00:28:21,164 | INFO     | mean x: 1715969550.5454545
[2024-05-17 20:28:41] 2024-05-18 00:28:21,164 | INFO     | mean y: 2480717.044077135
[2024-05-17 20:28:41] 2024-05-18 00:28:21,164 | INFO     | -- intersect: -16497470623.07525
[2024-05-17 20:28:41] 2024-05-18 00:28:21,164 | INFO     | intersect: -16497470623.07525
[2024-05-17 20:28:41] 2024-05-18 00:28:21,165 | INFO     | chi2: 10.634118690975152
[2024-05-17 20:28:41] 2024-05-18 00:28:21,165 | INFO     | -- intersect: -16497470623.07525
[2024-05-17 20:28:41] 2024-05-18 00:28:21,165 | INFO     | current memory leak: 9.62 B/s (using 726 data points, chi2=10.63)
[2024-05-17 20:28:41] 2024-05-18 00:28:21,166 | INFO     | ..............................
[2024-05-17 20:28:41] 2024-05-18 00:28:21,166 | INFO     | . Timing measurements:
[2024-05-17 20:28:41] 2024-05-18 00:28:21,166 | INFO     | . get job = 0 s
[2024-05-17 20:28:41] 2024-05-18 00:28:21,166 | INFO     | . initial setup = 2 s
[2024-05-17 20:28:41] 2024-05-18 00:28:21,167 | INFO     | . payload setup = 67 s
[2024-05-17 20:28:41] 2024-05-18 00:28:21,167 | INFO     | . stage-in = 0 s
[2024-05-17 20:28:41] 2024-05-18 00:28:21,167 | INFO     | . payload execution = 45300 s
[2024-05-17 20:28:41] 2024-05-18 00:28:21,167 | INFO     | . stage-out = 5 s
[2024-05-17 20:28:41] 2024-05-18 00:28:21,167 | INFO     | . log creation = 1 s
[2024-05-17 20:28:41] 2024-05-18 00:28:21,167 | INFO     | ..............................
[2024-05-17 20:28:41] 2024-05-18 00:28:21,408 | INFO     | 
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | job summary report
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | --------------------------------------------------
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | PanDA job id: 6207833562
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | task id: 38921013
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | errors: (none)
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | pilot state: finished 
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | transexitcode: 0
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | exeerrorcode: 0
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | exeerrordiag: 
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | exitcode: 0
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | exitmsg: OK
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | cpuconsumptiontime: 142728 s
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | nevents: 400
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | neventsw: 0
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | pid: 7084
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | pgrp: 7084
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | corecount: 8
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | event service: False
[2024-05-17 20:28:41] 2024-05-18 00:28:21,426 | INFO     | sizes: {0: 2390597, 1: 2392133, 12: 2392133, 22: 2392161, 33: 2392189, 37: 2392423, 44: 2392579, 45372: 2437089, 45377: 2446049, 45380: 2446105, 45416: 2446275}
[2024-05-17 20:28:41] 2024-05-18 00:28:21,427 | INFO     | --------------------------------------------------
[2024-05-17 20:28:41] 2024-05-18 00:28:21,427 | INFO     | 
[2024-05-17 20:28:41] 2024-05-18 00:28:21,427 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-05-17 20:28:41] 2024-05-18 00:28:21,562 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,562 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,562 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,563 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,564 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 20:28:41] 2024-05-18 00:28:21,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,564 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 20:28:41] 2024-05-18 00:28:21,564 | INFO     | job 6207833562 has completed (purged errors)
[2024-05-17 20:28:41] 2024-05-18 00:28:21,564 | INFO     | overall cleanup function is called
[2024-05-17 20:28:41] 2024-05-18 00:28:22,581 | INFO     | --- collectZombieJob: --- 10, [7084]
[2024-05-17 20:28:41] 2024-05-18 00:28:22,582 | INFO     | zombie collector waiting for pid 7084
[2024-05-17 20:28:41] 2024-05-18 00:28:22,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 20:28:41] 2024-05-18 00:28:23,586 | INFO     | collected zombie processes
[2024-05-17 20:28:41] 2024-05-18 00:28:23,587 | INFO     | will now attempt to kill all subprocesses of pid=7084
[2024-05-17 20:28:41] 2024-05-18 00:28:24,140 | INFO     | process IDs to be killed: [7084] (in reverse order)
[2024-05-17 20:28:41] 2024-05-18 00:28:24,428 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 20:28:41] 2024-05-18 00:28:24,428 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 20:28:41] 2024-05-18 00:28:24,443 | INFO     | did not find any defunct processes belonging to 7084
[2024-05-17 20:28:41] 2024-05-18 00:28:24,457 | INFO     | did not find any defunct processes belonging to 7084
[2024-05-17 20:28:41] 2024-05-18 00:28:24,458 | INFO     | ready for new job
[2024-05-17 20:28:41] 2024-05-18 00:28:24,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 20:28:41] 2024-05-18 00:28:24,460 | INFO     | *************************************
[2024-05-17 20:28:41] 2024-05-18 00:28:24,461 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 20:28:41] 2024-05-18 00:28:24,461 | INFO     | *************************************
[2024-05-17 20:28:41] 2024-05-18 00:28:24,461 | INFO     | 
[2024-05-17 20:28:41] 2024-05-18 00:28:24,465 | INFO     | architecture information:
[2024-05-17 20:28:41] 2024-05-18 00:28:24,477 | INFO     | executing command: cat /etc/os-release
[2024-05-17 20:28:41] 2024-05-18 00:28:24,510 | INFO     | cat /etc/os-release:
[2024-05-17 20:28:41] NAME="CentOS Linux"
[2024-05-17 20:28:41] VERSION="7 (Core)"
[2024-05-17 20:28:41] ID="centos"
[2024-05-17 20:28:41] ID_LIKE="rhel fedora"
[2024-05-17 20:28:41] VERSION_ID="7"
[2024-05-17 20:28:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 20:28:41] ANSI_COLOR="0;31"
[2024-05-17 20:28:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 20:28:41] HOME_URL="https://www.centos.org/"
[2024-05-17 20:28:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 20:28:41] 
[2024-05-17 20:28:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 20:28:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 20:28:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 20:28:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 20:28:41] 
[2024-05-17 20:28:41] 2024-05-18 00:28:24,511 | INFO     | *************************************
[2024-05-17 20:28:41] 2024-05-18 00:28:25,019 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-05-17 20:28:41] 2024-05-18 00:28:25,034 | INFO     | sufficient remaining disk space (99183755264 B)
[2024-05-17 20:28:41] 2024-05-18 00:28:25,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 20:28:41] 2024-05-18 00:28:25,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 20:28:41] 2024-05-18 00:28:25,034 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 20:28:41] 2024-05-18 00:28:25,035 | INFO     | aborting loop
[2024-05-17 20:28:41] 2024-05-18 00:28:25,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 20:28:41] 2024-05-18 00:28:25,035 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 20:28:41] 2024-05-18 00:28:25,036 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 20:28:41] 2024-05-18 00:28:25,036 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 20:28:41] 2024-05-18 00:28:25,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 20:28:41] 2024-05-18 00:28:25,713 | INFO     | all data control threads have been joined
[2024-05-17 20:28:41] 2024-05-18 00:28:26,007 | INFO     | all job control threads have been joined
[2024-05-17 20:28:41] 2024-05-18 00:28:26,035 | INFO     | all payload control threads have been joined
[2024-05-17 20:28:41] 2024-05-18 00:28:26,041 | INFO     | [job] retrieve thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:26,042 | INFO     | [job] job monitor thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:26,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 20:28:41] 2024-05-18 00:28:26,356 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:26,719 | INFO     | [data] control thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:26,885 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:26,886 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:26,911 | INFO     | [data] copytool_in thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:27,010 | INFO     | [payload] failed_post thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:27,012 | INFO     | [job] control thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:27,041 | INFO     | [payload] control thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:27,050 | INFO     | [data] copytool_out thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:27,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 20:28:41] 2024-05-18 00:28:27,272 | INFO     | [job] queue monitor thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:27,350 | INFO     | [job] validate thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:27,365 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:27,392 | INFO     | [payload] validate_post thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:31,098 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 20:28:41] 2024-05-18 00:28:32,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932559394624)>', '<ExcThread(monitor, started 139931896764160)>']
[2024-05-17 20:28:41] 2024-05-18 00:28:33,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 20:28:41] 2024-05-18 00:28:33,091 | INFO     | [monitor] control thread has ended
[2024-05-17 20:28:41] 2024-05-18 00:28:37,666 | INFO     | all workflow threads have been joined
[2024-05-17 20:28:41] 2024-05-18 00:28:37,667 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 20:28:41] 2024-05-18 00:28:37,667 | INFO     | traces error code: 0
[2024-05-17 20:28:41] 2024-05-18 00:28:37,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 20:28:41] 2024-05-18 00:28:38,356 [wrapper] ==== pilot stdout END ====
[2024-05-17 20:28:41] 2024-05-18 00:28:38,380 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 20:28:41] 2024-05-18 00:28:38,415 [wrapper] pilotpid: 52997
[2024-05-17 20:28:41] 2024-05-18 00:28:38,452 [wrapper] Pilot exit status: 0
[2024-05-17 20:28:41] 2024-05-18 00:28:38,629 [wrapper] pandaids: 6207833562
[2024-05-17 20:28:41] 2024-05-18 00:28:39,114 [wrapper] cleanup: SIGTERM to supervisor_pilot 56963 52998
[2024-05-17 20:28:41] 2024-05-18 00:28:39,117 [wrapper] Test setup, not cleaning
[2024-05-17 20:28:41] 2024-05-18 00:28:39,131 [wrapper] ==== wrapper stdout END ====
[2024-05-17 20:28:41] 2024-05-18 00:28:39,152 [wrapper] ==== wrapper stderr END ====
[2024-05-17 20:28:41] 2024-05-18 00:28:39,204 [wrapper] apfmon messages muted
[2024-05-17 20:28:41]  *** Error codes and diagnostics ***
[2024-05-17 20:28:41]     "exeErrorCode": 0,
[2024-05-17 20:28:41]     "exeErrorDiag": "",
[2024-05-17 20:28:41]     "pilotErrorCode": 0,
[2024-05-17 20:28:41]     "pilotErrorDiag": "",
[2024-05-17 20:28:41]  *** Listing of results directory ***
[2024-05-17 20:28:41] total 878324
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas    467845 May 17 03:14 pilot3.tar.gz
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas      5633 May 17 03:16 queuedata.json
[2024-05-17 20:28:41] -rwx------ 1 boincer umatlas     32251 May 17 03:17 runpilot2-wrapper.sh
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas       100 May 17 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 20:28:41] -rwxr-xr-x 1 boincer umatlas      7986 May 17 07:49 run_atlas
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas       105 May 17 07:49 job.xml
[2024-05-17 20:28:41] -rw-r--r-- 2 boincer umatlas 539138430 May 17 07:49 EVNT.38776210._000069.pool.root.1
[2024-05-17 20:28:41] -rw-r--r-- 2 boincer umatlas     17537 May 17 07:49 start_atlas.sh
[2024-05-17 20:28:41] drwxrwx--x 2 boincer umatlas      4096 May 17 07:49 shared
[2024-05-17 20:28:41] -rw-r--r-- 2 boincer umatlas    479998 May 17 07:49 input.tar.gz
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas         0 May 17 07:49 boinc_lockfile
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas      2640 May 17 07:49 pandaJob.out
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas       467 May 17 07:49 setup.sh.local
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas   1019378 May 17 07:49 agis_schedconf.cvmfs.json
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas   1324701 May 17 07:49 cric_ddmendpoints.json
[2024-05-17 20:28:41] drwx------ 4 boincer umatlas      4096 May 17 07:49 pilot3
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas      6389 May 17 20:21 init_data.xml
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas 345512757 May 17 20:26 HITS.38921013._001526.pool.root.1
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas       533 May 17 20:26 boinc_task_state.xml
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas      1090 May 17 20:27 memory_monitor_summary.json
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas        95 May 17 20:27 pilot_heartbeat.json
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas         0 May 17 20:27 agis_ddmendpoints.agis.ALL.json
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas    745005 May 17 20:27 log.38921013._001526.job.log.tgz.1
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas      7763 May 17 20:28 heartbeat.json
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas      4334 May 17 20:28 pilotlog.txt
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas      8192 May 17 20:28 boinc_mmap_file
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas        29 May 17 20:28 wrapper_checkpoint.txt
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas   4864432 May 17 20:28 log.38921013._001526.job.log.1
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas       357 May 17 20:28 output.list
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas       620 May 17 20:28 runtime_log
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas   5632000 May 17 20:28 result.tar.gz
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas       654 May 17 20:28 uCFKDmc16R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmbiQKDmxCvKCn.diag
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas     11400 May 17 20:28 runtime_log.err
[2024-05-17 20:28:41] -rw-r--r-- 1 boincer umatlas     21937 May 17 20:28 stderr.txt
[2024-05-17 20:28:41] HITS file was successfully produced:
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas 345512757 May 17 20:26 shared/HITS.pool.root.1
[2024-05-17 20:28:41]  *** Contents of shared directory: ***
[2024-05-17 20:28:41] total 869920
[2024-05-17 20:28:41] -rw-r--r-- 2 boincer umatlas 539138430 May 17 07:49 ATLAS.root_0
[2024-05-17 20:28:41] -rw-r--r-- 2 boincer umatlas     17537 May 17 07:49 start_atlas.sh
[2024-05-17 20:28:41] -rw-r--r-- 2 boincer umatlas    479998 May 17 07:49 input.tar.gz
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas 345512757 May 17 20:26 HITS.pool.root.1
[2024-05-17 20:28:41] -rw------- 1 boincer umatlas   5632000 May 17 20:28 result.tar.gz
20:28:42 (43671): run_atlas exited; CPU time 139586.650659
20:28:42 (43671): called boinc_finish(0)

</stderr_txt>
]]>

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