Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
09:55:34 (78318): wrapper (7.7.26015): starting
09:55:34 (78318): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 09:55:34] Arguments: --nthreads 12
[2024-05-17 09:55:34] Threads: 12
[2024-05-17 09:55:34] Checking for CVMFS
[2024-05-17 09:55:35] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 09:55:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 09:55:35] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 09:55:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 09:55:35] 2.10.1.0 2817 172486 149380 132848 1 180 23859000 45568001 12130 130560 0 976422549 99.762 594956059 17412 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 09:55:35] CVMFS is ok
[2024-05-17 09:55:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 09:55:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 09:55:35] Further information can be found at the LHC@home message board.
[2024-05-17 09:55:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 09:55:35] Checking for apptainer binary...
[2024-05-17 09:55:35] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 09:55:35] Running /usr/bin/apptainer --version
[2024-05-17 09:55:35] apptainer version 1.1.8-1.el7
[2024-05-17 09:55:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 09:55:36] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0135.triumf.lcg
[2024-05-17 09:55:36] apptainer works
[2024-05-17 09:55:36] Set ATHENA_PROC_NUMBER=12
[2024-05-17 09:55:36] Set ATHENA_CORE_NUMBER=12
[2024-05-17 09:55:36] Starting ATLAS job with PandaID=6207806114
[2024-05-17 09:55:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 11:04:31]  *** The last 200 lines of the pilot log: ***
[2024-05-17 11:04:31]  lfn=log.38776104._012689.job.log.tgz.1
[2024-05-17 11:04:31]  mtime=0
[2024-05-17 11:04:31]  protocol_id=None
[2024-05-17 11:04:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 11:04:31]  replicas=None
[2024-05-17 11:04:31]  scope=mc23_13p6TeV
[2024-05-17 11:04:31]  status=None
[2024-05-17 11:04:31]  status_code=0
[2024-05-17 11:04:31]  storage_token=
[2024-05-17 11:04:31]  surl=/home/boinc/slots/0/PanDA_Pilot-6207806114/log.38776104._012689.job.log.tgz.1
[2024-05-17 11:04:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/70/log.38776104._012689.job.log.tgz.1
[2024-05-17 11:04:31]  workdir=None
[2024-05-17 11:04:31] ]
[2024-05-17 11:04:31] 2024-05-17 18:04:00,192 | INFO     | transferring file log.38776104._012689.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207806114/log.38776104._012689.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 11:04:31] 2024-05-17 18:04:00,192 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207806114/log.38776104._012689.job.log.tgz.1 /home/boinc/slots/0/log.38776104._012689.job.log.t
[2024-05-17 11:04:31] 2024-05-17 18:04:00,221 | INFO     | adding to output.list: log.38776104._012689.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/70/log.38776104._012689.job.log.tg
[2024-05-17 11:04:31] 2024-05-17 18:04:00,222 | INFO     | summary of transferred files:
[2024-05-17 11:04:31] 2024-05-17 18:04:00,223 | INFO     |  -- lfn=log.38776104._012689.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 11:04:31] 2024-05-17 18:04:00,223 | INFO     | stage-out finished correctly
[2024-05-17 11:04:31] 2024-05-17 18:04:00,492 | INFO     | monitor loop #317: job 0:6207806114 is in state 'finished'
[2024-05-17 11:04:31] 2024-05-17 18:04:00,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 11:04:31] 2024-05-17 18:04:02,995 | INFO     | monitor loop #318: job 0:6207806114 is in state 'finished'
[2024-05-17 11:04:31] 2024-05-17 18:04:02,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 11:04:31] 2024-05-17 18:04:03,139 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 11:04:31] 2024-05-17 18:04:04,339 | INFO     | 4096s have passed since pilot start
[2024-05-17 11:04:31] 2024-05-17 18:04:04,677 | INFO     | job 6207806114 has state=finished
[2024-05-17 11:04:31] 2024-05-17 18:04:04,677 | INFO     | preparing for final server update for job 6207806114 in state='finished'
[2024-05-17 11:04:31] 2024-05-17 18:04:04,678 | INFO     | this job has now completed (state=finished)
[2024-05-17 11:04:31] 2024-05-17 18:04:04,678 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 11:04:31] 2024-05-17 18:04:04,678 | INFO     | job 6207806114 has finished - writing final server update
[2024-05-17 11:04:31] 2024-05-17 18:04:04,679 | INFO     | total number of processed events: 400 (read)
[2024-05-17 11:04:31] 2024-05-17 18:04:04,685 | INFO     | executing command: lscpu
[2024-05-17 11:04:31] 2024-05-17 18:04:04,739 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 11:04:31] 2024-05-17 18:04:04,740 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 11:04:31] 2024-05-17 18:04:04,799 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 11:04:31] 2024-05-17 18:04:05,498 | INFO     | monitor loop #319: job 0:6207806114 is in state 'finished'
[2024-05-17 11:04:31] 2024-05-17 18:04:05,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 11:04:31] 2024-05-17 18:04:08,001 | INFO     | monitor loop #320: job 0:6207806114 is in state 'finished'
[2024-05-17 11:04:31] 2024-05-17 18:04:08,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 11:04:31] 2024-05-17 18:04:09,725 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 11:04:31] 2024-05-17 18:04:09,725 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207806114/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 11:04:31] 2024-05-17 18:04:09,726 | INFO     | extracted standard info from prmon json
[2024-05-17 11:04:31] 2024-05-17 18:04:09,727 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 11:04:31] 2024-05-17 18:04:09,727 | WARNING  | GPU info not found in prmon json
[2024-05-17 11:04:31] 2024-05-17 18:04:09,727 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 11:04:31] 2024-05-17 18:04:09,727 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 11:04:31] 2024-05-17 18:04:09,729 | INFO     | fitting pss+swap vs Time
[2024-05-17 11:04:31] 2024-05-17 18:04:09,729 | INFO     | model: linear, x: [1715965283.0, 1715965344.0, 1715965405.0, 1715965466.0, 1715965527.0, 1715965588.0, 1715965649.0, 1715965710.0, 1715965771.0, 1715965832.0, 1715
[2024-05-17 11:04:31] 2024-05-17 18:04:09,729 | INFO     | sum of square deviations: 66959395.0
[2024-05-17 11:04:31] 2024-05-17 18:04:09,729 | INFO     | sum of deviations: 17541750541.0
[2024-05-17 11:04:31] 2024-05-17 18:04:09,729 | INFO     | mean x: 1715967082.5
[2024-05-17 11:04:31] 2024-05-17 18:04:09,729 | INFO     | mean y: 2559996.9
[2024-05-17 11:04:31] 2024-05-17 18:04:09,729 | INFO     | -- intersect: -449539531860.151
[2024-05-17 11:04:31] 2024-05-17 18:04:09,729 | INFO     | intersect: -449539531860.151
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | chi2: 2.0013409295052424
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | -- intersect: -449539531860.151
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | current memory leak: 261.98 B/s (using 60 data points, chi2=2.00)
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | ..............................
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | . Timing measurements:
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | . get job = 0 s
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | . initial setup = 2 s
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | . payload setup = 6 s
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | . stage-in = 0 s
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | . payload execution = 4062 s
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | . stage-out = 0 s
[2024-05-17 11:04:31] 2024-05-17 18:04:09,730 | INFO     | . log creation = 0 s
[2024-05-17 11:04:31] 2024-05-17 18:04:09,731 | INFO     | ..............................
[2024-05-17 11:04:31] 2024-05-17 18:04:09,799 | INFO     | 
[2024-05-17 11:04:31] 2024-05-17 18:04:09,800 | INFO     | job summary report
[2024-05-17 11:04:31] 2024-05-17 18:04:09,800 | INFO     | --------------------------------------------------
[2024-05-17 11:04:31] 2024-05-17 18:04:09,800 | INFO     | PanDA job id: 6207806114
[2024-05-17 11:04:31] 2024-05-17 18:04:09,800 | INFO     | task id: 38776104
[2024-05-17 11:04:31] 2024-05-17 18:04:09,801 | INFO     | errors: (none)
[2024-05-17 11:04:31] 2024-05-17 18:04:09,801 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 11:04:31] 2024-05-17 18:04:09,801 | INFO     | pilot state: finished 
[2024-05-17 11:04:31] 2024-05-17 18:04:09,801 | INFO     | transexitcode: 0
[2024-05-17 11:04:31] 2024-05-17 18:04:09,801 | INFO     | exeerrorcode: 0
[2024-05-17 11:04:31] 2024-05-17 18:04:09,801 | INFO     | exeerrordiag: 
[2024-05-17 11:04:31] 2024-05-17 18:04:09,801 | INFO     | exitcode: 0
[2024-05-17 11:04:31] 2024-05-17 18:04:09,801 | INFO     | exitmsg: OK
[2024-05-17 11:04:31] 2024-05-17 18:04:09,801 | INFO     | cpuconsumptiontime: 35821 s
[2024-05-17 11:04:31] 2024-05-17 18:04:09,802 | INFO     | nevents: 400
[2024-05-17 11:04:31] 2024-05-17 18:04:09,802 | INFO     | neventsw: 0
[2024-05-17 11:04:31] 2024-05-17 18:04:09,802 | INFO     | pid: 95690
[2024-05-17 11:04:31] 2024-05-17 18:04:09,802 | INFO     | pgrp: 95690
[2024-05-17 11:04:31] 2024-05-17 18:04:09,802 | INFO     | corecount: 12
[2024-05-17 11:04:31] 2024-05-17 18:04:09,802 | INFO     | event service: False
[2024-05-17 11:04:31] 2024-05-17 18:04:09,802 | INFO     | sizes: {0: 2392154, 5: 2392360, 11: 2392416, 4073: 2418283, 4074: 2427237, 4077: 2427293, 4084: 2427591}
[2024-05-17 11:04:31] 2024-05-17 18:04:09,802 | INFO     | --------------------------------------------------
[2024-05-17 11:04:31] 2024-05-17 18:04:09,803 | INFO     | 
[2024-05-17 11:04:31] 2024-05-17 18:04:09,803 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 11:04:31] 2024-05-17 18:04:09,833 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,833 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,833 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,833 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,835 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 11:04:31] 2024-05-17 18:04:09,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,836 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 11:04:31] 2024-05-17 18:04:09,836 | INFO     | job 6207806114 has completed (purged errors)
[2024-05-17 11:04:31] 2024-05-17 18:04:09,836 | INFO     | overall cleanup function is called
[2024-05-17 11:04:31] 2024-05-17 18:04:10,843 | INFO     | --- collectZombieJob: --- 10, [95690]
[2024-05-17 11:04:31] 2024-05-17 18:04:10,844 | INFO     | zombie collector waiting for pid 95690
[2024-05-17 11:04:31] 2024-05-17 18:04:10,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 11:04:31] 2024-05-17 18:04:11,847 | INFO     | collected zombie processes
[2024-05-17 11:04:31] 2024-05-17 18:04:11,848 | INFO     | will now attempt to kill all subprocesses of pid=95690
[2024-05-17 11:04:31] 2024-05-17 18:04:12,038 | INFO     | process IDs to be killed: [95690] (in reverse order)
[2024-05-17 11:04:31] 2024-05-17 18:04:12,164 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 11:04:31] 2024-05-17 18:04:12,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 11:04:31] 2024-05-17 18:04:12,175 | INFO     | did not find any defunct processes belonging to 95690
[2024-05-17 11:04:31] 2024-05-17 18:04:12,182 | INFO     | did not find any defunct processes belonging to 95690
[2024-05-17 11:04:31] 2024-05-17 18:04:12,182 | INFO     | ready for new job
[2024-05-17 11:04:31] 2024-05-17 18:04:12,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 11:04:31] 2024-05-17 18:04:12,184 | INFO     | *************************************
[2024-05-17 11:04:31] 2024-05-17 18:04:12,184 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 11:04:31] 2024-05-17 18:04:12,184 | INFO     | *************************************
[2024-05-17 11:04:31] 2024-05-17 18:04:12,184 | INFO     | 
[2024-05-17 11:04:31] 2024-05-17 18:04:12,187 | INFO     | architecture information:
[2024-05-17 11:04:31] 2024-05-17 18:04:12,187 | INFO     | executing command: cat /etc/os-release
[2024-05-17 11:04:31] 2024-05-17 18:04:12,211 | INFO     | cat /etc/os-release:
[2024-05-17 11:04:31] NAME="CentOS Linux"
[2024-05-17 11:04:31] VERSION="7 (Core)"
[2024-05-17 11:04:31] ID="centos"
[2024-05-17 11:04:31] ID_LIKE="rhel fedora"
[2024-05-17 11:04:31] VERSION_ID="7"
[2024-05-17 11:04:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 11:04:31] ANSI_COLOR="0;31"
[2024-05-17 11:04:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 11:04:31] HOME_URL="https://www.centos.org/"
[2024-05-17 11:04:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 11:04:31] 
[2024-05-17 11:04:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 11:04:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 11:04:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 11:04:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 11:04:31] 
[2024-05-17 11:04:31] 2024-05-17 18:04:12,211 | INFO     | *************************************
[2024-05-17 11:04:31] 2024-05-17 18:04:12,713 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 11:04:31] 2024-05-17 18:04:12,740 | INFO     | sufficient remaining disk space (2106728644608 B)
[2024-05-17 11:04:31] 2024-05-17 18:04:12,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 11:04:31] 2024-05-17 18:04:12,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 11:04:31] 2024-05-17 18:04:13,013 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-17 11:04:31] 2024-05-17 18:04:13,013 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-17 11:04:31] 2024-05-17 18:04:13,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 11:04:31] 2024-05-17 18:04:13,014 | INFO     | will abort loop
[2024-05-17 11:04:31] 2024-05-17 18:04:13,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 11:04:31] 2024-05-17 18:04:13,351 | INFO     | all job control threads have been joined
[2024-05-17 11:04:31] 2024-05-17 18:04:13,364 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 11:04:31] 2024-05-17 18:04:13,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 11:04:31] 2024-05-17 18:04:13,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 11:04:31] 2024-05-17 18:04:13,556 | INFO     | all payload control threads have been joined
[2024-05-17 11:04:31] 2024-05-17 18:04:13,716 | INFO     | all data control threads have been joined
[2024-05-17 11:04:31] 2024-05-17 18:04:13,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 11:04:31] 2024-05-17 18:04:13,747 | INFO     | [job] retrieve thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:13,780 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,015 | INFO     | [job] job monitor thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,115 | INFO     | [data] copytool_in thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,355 | INFO     | [job] control thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,384 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,561 | INFO     | [payload] control thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,613 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,668 | INFO     | [job] validate thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,698 | INFO     | [payload] failed_post thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,722 | INFO     | [data] control thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,747 | INFO     | [payload] validate_post thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:14,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 11:04:31] 2024-05-17 18:04:15,314 | INFO     | [data] copytool_out thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:15,809 | INFO     | [job] queue monitor thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:17,723 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:23,582 | INFO     | job.realtimelogging is not enabled
[2024-05-17 11:04:31] 2024-05-17 18:04:24,585 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 11:04:31] 2024-05-17 18:04:24,754 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816690296640)>', '<ExcThread(monitor, started 139815748105984)>']
[2024-05-17 11:04:31] 2024-05-17 18:04:25,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 11:04:31] 2024-05-17 18:04:25,425 | INFO     | [monitor] control thread has ended
[2024-05-17 11:04:31] 2024-05-17 18:04:29,763 | INFO     | all workflow threads have been joined
[2024-05-17 11:04:31] 2024-05-17 18:04:29,763 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 11:04:31] 2024-05-17 18:04:29,764 | INFO     | traces error code: 0
[2024-05-17 11:04:31] 2024-05-17 18:04:29,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 11:04:31] 2024-05-17 18:04:29,855 [wrapper] ==== pilot stdout END ====
[2024-05-17 11:04:31] 2024-05-17 18:04:29,859 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 11:04:31] 2024-05-17 18:04:29,863 [wrapper] pilotpid: 83107
[2024-05-17 11:04:31] 2024-05-17 18:04:29,867 [wrapper] Pilot exit status: 0
[2024-05-17 11:04:31] 2024-05-17 18:04:29,880 [wrapper] pandaids: 6207806114
[2024-05-17 11:04:31] 2024-05-17 18:04:29,960 [wrapper] cleanup: SIGTERM to supervisor_pilot 174310 83108
[2024-05-17 11:04:31] 2024-05-17 18:04:29,965 [wrapper] Test setup, not cleaning
[2024-05-17 11:04:31] 2024-05-17 18:04:29,969 [wrapper] ==== wrapper stdout END ====
[2024-05-17 11:04:31] 2024-05-17 18:04:29,973 [wrapper] ==== wrapper stderr END ====
[2024-05-17 11:04:31] 2024-05-17 18:04:29,982 [wrapper] apfmon messages muted
[2024-05-17 11:04:31]  *** Error codes and diagnostics ***
[2024-05-17 11:04:31]     "exeErrorCode": 0,
[2024-05-17 11:04:31]     "exeErrorDiag": "",
[2024-05-17 11:04:31]     "pilotErrorCode": 0,
[2024-05-17 11:04:31]     "pilotErrorDiag": "",
[2024-05-17 11:04:31]  *** Listing of results directory ***
[2024-05-17 11:04:31] total 811736
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc    467845 May 16 23:50 pilot3.tar.gz
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc      5633 May 17 00:03 queuedata.json
[2024-05-17 11:04:31] -rwx------ 1 boinc boinc     32251 May 17 00:04 runpilot2-wrapper.sh
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc       100 May 17 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 11:04:31] -rwxr-xr-x 1 boinc boinc      7986 May 17 09:55 run_atlas
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc       105 May 17 09:55 job.xml
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc      6622 May 17 09:55 init_data.xml
[2024-05-17 11:04:31] -rw-r--r-- 2 boinc boinc 598856199 May 17 09:55 EVNT.38776100._000456.pool.root.1
[2024-05-17 11:04:31] drwxrwx--x 2 boinc boinc      4096 May 17 09:55 shared
[2024-05-17 11:04:31] -rw-r--r-- 2 boinc boinc    480011 May 17 09:55 input.tar.gz
[2024-05-17 11:04:31] -rw-r--r-- 2 boinc boinc     17537 May 17 09:55 start_atlas.sh
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc         0 May 17 09:55 boinc_lockfile
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc      2644 May 17 09:55 pandaJob.out
[2024-05-17 11:04:31] -rw------- 1 boinc boinc       424 May 17 09:55 setup.sh.local
[2024-05-17 11:04:31] -rw------- 1 boinc boinc   1019452 May 17 09:55 agis_schedconf.cvmfs.json
[2024-05-17 11:04:31] -rw------- 1 boinc boinc         0 May 17 09:55 agis_ddmendpoints.agis.ALL.json
[2024-05-17 11:04:31] -rw------- 1 boinc boinc   1324701 May 17 09:55 cric_ddmendpoints.json
[2024-05-17 11:04:31] drwx------ 4 boinc boinc      4096 May 17 09:55 pilot3
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc       531 May 17 11:03 boinc_task_state.xml
[2024-05-17 11:04:31] -rw------- 1 boinc boinc 227271062 May 17 11:03 HITS.38776104._012689.pool.root.1
[2024-05-17 11:04:31] -rw------- 1 boinc boinc      1055 May 17 11:03 memory_monitor_summary.json
[2024-05-17 11:04:31] -rw------- 1 boinc boinc    367008 May 17 11:04 log.38776104._012689.job.log.tgz.1
[2024-05-17 11:04:31] -rw------- 1 boinc boinc        95 May 17 11:04 pilot_heartbeat.json
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc      8192 May 17 11:04 boinc_mmap_file
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc        27 May 17 11:04 wrapper_checkpoint.txt
[2024-05-17 11:04:31] -rw------- 1 boinc boinc      7768 May 17 11:04 heartbeat.json
[2024-05-17 11:04:31] -rw------- 1 boinc boinc      4468 May 17 11:04 pilotlog.txt
[2024-05-17 11:04:31] -rw------- 1 boinc boinc    409154 May 17 11:04 log.38776104._012689.job.log.1
[2024-05-17 11:04:31] -rw------- 1 boinc boinc       357 May 17 11:04 output.list
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc       620 May 17 11:04 runtime_log
[2024-05-17 11:04:31] -rw------- 1 boinc boinc    798720 May 17 11:04 result.tar.gz
[2024-05-17 11:04:31] -rw------- 1 boinc boinc       654 May 17 11:04 jLoNDmUo6R5n7Olcko1bjSoqABFKDmABFKDmOtvXDmLcZKDmRWsI3n.diag
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc     11286 May 17 11:04 runtime_log.err
[2024-05-17 11:04:31] -rw-r--r-- 1 boinc boinc     21913 May 17 11:04 stderr.txt
[2024-05-17 11:04:31] HITS file was successfully produced:
[2024-05-17 11:04:31] -rw------- 1 boinc boinc 227271062 May 17 11:03 shared/HITS.pool.root.1
[2024-05-17 11:04:31]  *** Contents of shared directory: ***
[2024-05-17 11:04:31] total 808052
[2024-05-17 11:04:31] -rw-r--r-- 2 boinc boinc 598856199 May 17 09:55 ATLAS.root_0
[2024-05-17 11:04:31] -rw-r--r-- 2 boinc boinc    480011 May 17 09:55 input.tar.gz
[2024-05-17 11:04:31] -rw-r--r-- 2 boinc boinc     17537 May 17 09:55 start_atlas.sh
[2024-05-17 11:04:31] -rw------- 1 boinc boinc 227271062 May 17 11:03 HITS.pool.root.1
[2024-05-17 11:04:31] -rw------- 1 boinc boinc    798720 May 17 11:04 result.tar.gz
11:04:32 (78318): run_atlas exited; CPU time 35397.186812
11:04:32 (78318): called boinc_finish(0)

</stderr_txt>
]]>

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