Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
06:51:31 (235125): wrapper (7.7.26015): starting
06:51:31 (235125): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 06:51:31] Arguments: --nthreads 12
[2024-05-17 06:51:31] Threads: 12
[2024-05-17 06:51:31] Checking for CVMFS
[2024-05-17 06:51:31] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 06:51:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 06:51:32] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 06:51:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 06:51:32] 2.10.1.0 2809 172303 174060 132842 0 133 37819244 45568001 10460 130560 0 1109355865 99.762 702274432 16565 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 06:51:32] CVMFS is ok
[2024-05-17 06:51:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 06:51:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 06:51:32] Further information can be found at the LHC@home message board.
[2024-05-17 06:51:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 06:51:32] Checking for apptainer binary...
[2024-05-17 06:51:32] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 06:51:32] Running /usr/bin/apptainer --version
[2024-05-17 06:51:32] apptainer version 1.1.8-1.el7
[2024-05-17 06:51:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 06:51:33] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0075.triumf.lcg
[2024-05-17 06:51:33] apptainer works
[2024-05-17 06:51:33] Set ATHENA_PROC_NUMBER=12
[2024-05-17 06:51:33] Set ATHENA_CORE_NUMBER=12
[2024-05-17 06:51:33] Starting ATLAS job with PandaID=6207804946
[2024-05-17 06:51:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 07:50:41]  *** The last 200 lines of the pilot log: ***
[2024-05-17 07:50:41]  direct_access_wan=False
[2024-05-17 07:50:41]  domain=
[2024-05-17 07:50:41]  filesize=349478
[2024-05-17 07:50:41]  filetype=log
[2024-05-17 07:50:41]  guid=b8f863ef-3579-4803-beef-d18f20f8f07b
[2024-05-17 07:50:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 07:50:41]  is_tar=False
[2024-05-17 07:50:41]  lfn=log.38776104._012578.job.log.tgz.1
[2024-05-17 07:50:41]  mtime=0
[2024-05-17 07:50:41]  protocol_id=None
[2024-05-17 07:50:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 07:50:41]  replicas=None
[2024-05-17 07:50:41]  scope=mc23_13p6TeV
[2024-05-17 07:50:41]  status=None
[2024-05-17 07:50:41]  status_code=0
[2024-05-17 07:50:41]  storage_token=
[2024-05-17 07:50:41]  surl=/home/boinc/slots/0/PanDA_Pilot-6207804946/log.38776104._012578.job.log.tgz.1
[2024-05-17 07:50:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/c3/log.38776104._012578.job.log.tgz.1
[2024-05-17 07:50:41]  workdir=None
[2024-05-17 07:50:41] ]
[2024-05-17 07:50:41] 2024-05-17 14:50:20,143 | INFO     | transferring file log.38776104._012578.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207804946/log.38776104._012578.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 07:50:41] 2024-05-17 14:50:20,143 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207804946/log.38776104._012578.job.log.tgz.1 /home/boinc/slots/0/log.38776104._012578.job.log.t
[2024-05-17 07:50:41] 2024-05-17 14:50:20,167 | INFO     | adding to output.list: log.38776104._012578.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d7/c3/log.38776104._012578.job.log.tg
[2024-05-17 07:50:41] 2024-05-17 14:50:20,168 | INFO     | summary of transferred files:
[2024-05-17 07:50:41] 2024-05-17 14:50:20,168 | INFO     |  -- lfn=log.38776104._012578.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 07:50:41] 2024-05-17 14:50:20,168 | INFO     | stage-out finished correctly
[2024-05-17 07:50:41] 2024-05-17 14:50:21,978 | INFO     | monitor loop #274: job 0:6207804946 is in state 'finished'
[2024-05-17 07:50:41] 2024-05-17 14:50:21,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 07:50:41] 2024-05-17 14:50:23,563 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 07:50:41] 2024-05-17 14:50:23,657 | INFO     | job 6207804946 has state=finished
[2024-05-17 07:50:41] 2024-05-17 14:50:23,657 | INFO     | preparing for final server update for job 6207804946 in state='finished'
[2024-05-17 07:50:41] 2024-05-17 14:50:23,658 | INFO     | this job has now completed (state=finished)
[2024-05-17 07:50:41] 2024-05-17 14:50:23,658 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 07:50:41] 2024-05-17 14:50:23,658 | INFO     | job 6207804946 has finished - writing final server update
[2024-05-17 07:50:41] 2024-05-17 14:50:23,658 | INFO     | total number of processed events: 400 (read)
[2024-05-17 07:50:41] 2024-05-17 14:50:23,663 | INFO     | executing command: lscpu
[2024-05-17 07:50:41] 2024-05-17 14:50:23,710 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 07:50:41] 2024-05-17 14:50:23,711 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 07:50:41] 2024-05-17 14:50:23,748 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 07:50:41] 2024-05-17 14:50:24,482 | INFO     | monitor loop #275: job 0:6207804946 is in state 'finished'
[2024-05-17 07:50:41] 2024-05-17 14:50:24,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 07:50:41] 2024-05-17 14:50:26,909 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 07:50:41] 2024-05-17 14:50:26,910 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207804946/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 07:50:41] 2024-05-17 14:50:26,911 | INFO     | extracted standard info from prmon json
[2024-05-17 07:50:41] 2024-05-17 14:50:26,911 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 07:50:41] 2024-05-17 14:50:26,911 | WARNING  | GPU info not found in prmon json
[2024-05-17 07:50:41] 2024-05-17 14:50:26,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 07:50:41] 2024-05-17 14:50:26,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 07:50:41] 2024-05-17 14:50:26,914 | INFO     | fitting pss+swap vs Time
[2024-05-17 07:50:41] 2024-05-17 14:50:26,914 | INFO     | model: linear, x: [1715954230.0, 1715954291.0, 1715954352.0, 1715954413.0, 1715954474.0, 1715954535.0, 1715954596.0, 1715954657.0, 1715954718.0, 1715954779.0, 1715
[2024-05-17 07:50:41] 2024-05-17 14:50:26,914 | INFO     | sum of square deviations: 41117050.0
[2024-05-17 07:50:41] 2024-05-17 14:50:26,914 | INFO     | sum of deviations: 14485152720.000002
[2024-05-17 07:50:41] 2024-05-17 14:50:26,915 | INFO     | mean x: 1715955755.0
[2024-05-17 07:50:41] 2024-05-17 14:50:26,915 | INFO     | mean y: 2534526.588235294
[2024-05-17 07:50:41] 2024-05-17 14:50:26,915 | INFO     | -- intersect: -604512652529.3389
[2024-05-17 07:50:41] 2024-05-17 14:50:26,915 | INFO     | intersect: -604512652529.3389
[2024-05-17 07:50:41] 2024-05-17 14:50:26,915 | INFO     | chi2: 1.866697700606273
[2024-05-17 07:50:41] 2024-05-17 14:50:26,915 | INFO     | -- intersect: -604512652529.3389
[2024-05-17 07:50:41] 2024-05-17 14:50:26,915 | INFO     | current memory leak: 352.29 B/s (using 51 data points, chi2=1.87)
[2024-05-17 07:50:41] 2024-05-17 14:50:26,916 | INFO     | ..............................
[2024-05-17 07:50:41] 2024-05-17 14:50:26,916 | INFO     | . Timing measurements:
[2024-05-17 07:50:41] 2024-05-17 14:50:26,916 | INFO     | . get job = 0 s
[2024-05-17 07:50:41] 2024-05-17 14:50:26,916 | INFO     | . initial setup = 1 s
[2024-05-17 07:50:41] 2024-05-17 14:50:26,916 | INFO     | . payload setup = 4 s
[2024-05-17 07:50:41] 2024-05-17 14:50:26,916 | INFO     | . stage-in = 0 s
[2024-05-17 07:50:41] 2024-05-17 14:50:26,916 | INFO     | . payload execution = 3493 s
[2024-05-17 07:50:41] 2024-05-17 14:50:26,916 | INFO     | . stage-out = 0 s
[2024-05-17 07:50:41] 2024-05-17 14:50:26,917 | INFO     | . log creation = 0 s
[2024-05-17 07:50:41] 2024-05-17 14:50:26,917 | INFO     | ..............................
[2024-05-17 07:50:41] 2024-05-17 14:50:27,002 | INFO     | 
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | job summary report
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | --------------------------------------------------
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | PanDA job id: 6207804946
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | task id: 38776104
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | errors: (none)
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | pilot state: finished 
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | transexitcode: 0
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | exeerrorcode: 0
[2024-05-17 07:50:41] 2024-05-17 14:50:27,003 | INFO     | exeerrordiag: 
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | exitcode: 0
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | exitmsg: OK
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | cpuconsumptiontime: 29409 s
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | nevents: 400
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | neventsw: 0
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | pid: 266759
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | pgrp: 266759
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | corecount: 12
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | event service: False
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | sizes: {0: 2392154, 3: 2392360, 11: 2392388, 3501: 2418056, 3503: 2427010, 3506: 2427066, 3510: 2427364}
[2024-05-17 07:50:41] 2024-05-17 14:50:27,004 | INFO     | --------------------------------------------------
[2024-05-17 07:50:41] 2024-05-17 14:50:27,005 | INFO     | 
[2024-05-17 07:50:41] 2024-05-17 14:50:27,005 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 07:50:41] 2024-05-17 14:50:27,033 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,033 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,033 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,033 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 07:50:41] 2024-05-17 14:50:27,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,035 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 07:50:41] 2024-05-17 14:50:27,035 | INFO     | job 6207804946 has completed (purged errors)
[2024-05-17 07:50:41] 2024-05-17 14:50:27,035 | INFO     | overall cleanup function is called
[2024-05-17 07:50:41] 2024-05-17 14:50:28,041 | INFO     | --- collectZombieJob: --- 10, [266759]
[2024-05-17 07:50:41] 2024-05-17 14:50:28,041 | INFO     | zombie collector waiting for pid 266759
[2024-05-17 07:50:41] 2024-05-17 14:50:28,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 07:50:41] 2024-05-17 14:50:29,046 | INFO     | collected zombie processes
[2024-05-17 07:50:41] 2024-05-17 14:50:29,047 | INFO     | will now attempt to kill all subprocesses of pid=266759
[2024-05-17 07:50:41] 2024-05-17 14:50:29,236 | INFO     | process IDs to be killed: [266759] (in reverse order)
[2024-05-17 07:50:41] 2024-05-17 14:50:29,326 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 07:50:41] 2024-05-17 14:50:29,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 07:50:41] 2024-05-17 14:50:29,333 | INFO     | did not find any defunct processes belonging to 266759
[2024-05-17 07:50:41] 2024-05-17 14:50:29,338 | INFO     | did not find any defunct processes belonging to 266759
[2024-05-17 07:50:41] 2024-05-17 14:50:29,338 | INFO     | ready for new job
[2024-05-17 07:50:41] 2024-05-17 14:50:29,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 07:50:41] 2024-05-17 14:50:29,343 | INFO     | *************************************
[2024-05-17 07:50:41] 2024-05-17 14:50:29,343 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 07:50:41] 2024-05-17 14:50:29,343 | INFO     | *************************************
[2024-05-17 07:50:41] 2024-05-17 14:50:29,343 | INFO     | 
[2024-05-17 07:50:41] 2024-05-17 14:50:29,345 | INFO     | architecture information:
[2024-05-17 07:50:41] 2024-05-17 14:50:29,345 | INFO     | executing command: cat /etc/os-release
[2024-05-17 07:50:41] 2024-05-17 14:50:29,359 | INFO     | cat /etc/os-release:
[2024-05-17 07:50:41] NAME="CentOS Linux"
[2024-05-17 07:50:41] VERSION="7 (Core)"
[2024-05-17 07:50:41] ID="centos"
[2024-05-17 07:50:41] ID_LIKE="rhel fedora"
[2024-05-17 07:50:41] VERSION_ID="7"
[2024-05-17 07:50:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 07:50:41] ANSI_COLOR="0;31"
[2024-05-17 07:50:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 07:50:41] HOME_URL="https://www.centos.org/"
[2024-05-17 07:50:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 07:50:41] 
[2024-05-17 07:50:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 07:50:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 07:50:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 07:50:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 07:50:41] 
[2024-05-17 07:50:41] 2024-05-17 14:50:29,359 | INFO     | *************************************
[2024-05-17 07:50:41] 2024-05-17 14:50:29,863 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 07:50:41] 2024-05-17 14:50:29,885 | INFO     | sufficient remaining disk space (2117756518400 B)
[2024-05-17 07:50:41] 2024-05-17 14:50:29,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 07:50:41] 2024-05-17 14:50:29,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 07:50:41] 2024-05-17 14:50:29,886 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 07:50:41] 2024-05-17 14:50:29,886 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 07:50:41] 2024-05-17 14:50:29,887 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 07:50:41] 2024-05-17 14:50:29,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 07:50:41] 2024-05-17 14:50:29,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 07:50:41] 2024-05-17 14:50:30,102 | INFO     | all payload control threads have been joined
[2024-05-17 07:50:41] 2024-05-17 14:50:30,309 | INFO     | all job control threads have been joined
[2024-05-17 07:50:41] 2024-05-17 14:50:30,496 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 07:50:41] 2024-05-17 14:50:30,497 | INFO     | aborting loop
[2024-05-17 07:50:41] 2024-05-17 14:50:30,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 07:50:41] 2024-05-17 14:50:30,816 | INFO     | all data control threads have been joined
[2024-05-17 07:50:41] 2024-05-17 14:50:30,892 | INFO     | [job] retrieve thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:30,895 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:30,978 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:30,996 | INFO     | [data] copytool_in thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:31,053 | INFO     | [payload] failed_post thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:31,107 | INFO     | [payload] control thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:31,314 | INFO     | [job] control thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:31,417 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:31,502 | INFO     | [job] job monitor thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:31,581 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:31,818 | INFO     | [data] control thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:32,007 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 07:50:41] 2024-05-17 14:50:32,103 | INFO     | [job] validate thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:32,283 | INFO     | [payload] validate_post thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:32,748 | INFO     | [data] copytool_out thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:33,010 | INFO     | [job] queue monitor thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:33,891 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 07:50:41] 2024-05-17 14:50:35,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904723826496)>', '<ExcThread(monitor, started 139904306628352)>']
[2024-05-17 07:50:41] 2024-05-17 14:50:35,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 07:50:41] 2024-05-17 14:50:35,912 | INFO     | [monitor] control thread has ended
[2024-05-17 07:50:41] 2024-05-17 14:50:40,475 | INFO     | all workflow threads have been joined
[2024-05-17 07:50:41] 2024-05-17 14:50:40,475 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 07:50:41] 2024-05-17 14:50:40,475 | INFO     | traces error code: 0
[2024-05-17 07:50:41] 2024-05-17 14:50:40,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 07:50:41] 2024-05-17 14:50:40,550 [wrapper] ==== pilot stdout END ====
[2024-05-17 07:50:41] 2024-05-17 14:50:40,554 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 07:50:41] 2024-05-17 14:50:40,558 [wrapper] pilotpid: 246849
[2024-05-17 07:50:41] 2024-05-17 14:50:40,561 [wrapper] Pilot exit status: 0
[2024-05-17 07:50:41] 2024-05-17 14:50:40,570 [wrapper] pandaids: 6207804946
[2024-05-17 07:50:41] 2024-05-17 14:50:40,630 [wrapper] cleanup: SIGTERM to supervisor_pilot 123291 246851
[2024-05-17 07:50:41] 2024-05-17 14:50:40,633 [wrapper] Test setup, not cleaning
[2024-05-17 07:50:41] 2024-05-17 14:50:40,636 [wrapper] ==== wrapper stdout END ====
[2024-05-17 07:50:41] 2024-05-17 14:50:40,638 [wrapper] ==== wrapper stderr END ====
[2024-05-17 07:50:41] 2024-05-17 14:50:40,643 [wrapper] apfmon messages muted
[2024-05-17 07:50:41]  *** Error codes and diagnostics ***
[2024-05-17 07:50:41]     "exeErrorCode": 0,
[2024-05-17 07:50:41]     "exeErrorDiag": "",
[2024-05-17 07:50:41]     "pilotErrorCode": 0,
[2024-05-17 07:50:41]     "pilotErrorDiag": "",
[2024-05-17 07:50:41]  *** Listing of results directory ***
[2024-05-17 07:50:41] total 822928
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc    467845 May 16 23:31 pilot3.tar.gz
[2024-05-17 07:50:41] -rwx------ 1 boinc boinc     32251 May 16 23:45 runpilot2-wrapper.sh
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc      5633 May 16 23:45 queuedata.json
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc       100 May 17 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 07:50:41] -rwxr-xr-x 1 boinc boinc      7986 May 17 06:51 run_atlas
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc       105 May 17 06:51 job.xml
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc      6626 May 17 06:51 init_data.xml
[2024-05-17 07:50:41] -rw-r--r-- 2 boinc boinc 600257675 May 17 06:51 EVNT.38776100._000452.pool.root.1
[2024-05-17 07:50:41] -rw-r--r-- 2 boinc boinc    479998 May 17 06:51 input.tar.gz
[2024-05-17 07:50:41] -rw-r--r-- 2 boinc boinc     17537 May 17 06:51 start_atlas.sh
[2024-05-17 07:50:41] drwxrwx--x 2 boinc boinc      4096 May 17 06:51 shared
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc         0 May 17 06:51 boinc_lockfile
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc      2644 May 17 06:51 pandaJob.out
[2024-05-17 07:50:41] -rw------- 1 boinc boinc       424 May 17 06:51 setup.sh.local
[2024-05-17 07:50:41] -rw------- 1 boinc boinc   1019386 May 17 06:51 agis_schedconf.cvmfs.json
[2024-05-17 07:50:41] -rw------- 1 boinc boinc         0 May 17 06:51 agis_ddmendpoints.agis.ALL.json
[2024-05-17 07:50:41] -rw------- 1 boinc boinc   1324701 May 17 06:51 cric_ddmendpoints.json
[2024-05-17 07:50:41] drwx------ 4 boinc boinc      4096 May 17 06:51 pilot3
[2024-05-17 07:50:41] -rw------- 1 boinc boinc 237465678 May 17 07:49 HITS.38776104._012578.pool.root.1
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc       530 May 17 07:49 boinc_task_state.xml
[2024-05-17 07:50:41] -rw------- 1 boinc boinc        95 May 17 07:49 pilot_heartbeat.json
[2024-05-17 07:50:41] -rw------- 1 boinc boinc      1055 May 17 07:50 memory_monitor_summary.json
[2024-05-17 07:50:41] -rw------- 1 boinc boinc    349478 May 17 07:50 log.38776104._012578.job.log.tgz.1
[2024-05-17 07:50:41] -rw------- 1 boinc boinc      7771 May 17 07:50 heartbeat.json
[2024-05-17 07:50:41] -rw------- 1 boinc boinc      4333 May 17 07:50 pilotlog.txt
[2024-05-17 07:50:41] -rw------- 1 boinc boinc    357934 May 17 07:50 log.38776104._012578.job.log.1
[2024-05-17 07:50:41] -rw------- 1 boinc boinc       357 May 17 07:50 output.list
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc       620 May 17 07:50 runtime_log
[2024-05-17 07:50:41] -rw------- 1 boinc boinc    727040 May 17 07:50 result.tar.gz
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc     11286 May 17 07:50 runtime_log.err
[2024-05-17 07:50:41] -rw------- 1 boinc boinc       654 May 17 07:50 ArnNDmdW6R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmyfQKDmGniJGn.diag
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc      8192 May 17 07:50 boinc_mmap_file
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc        27 May 17 07:50 wrapper_checkpoint.txt
[2024-05-17 07:50:41] -rw-r--r-- 1 boinc boinc     21483 May 17 07:50 stderr.txt
[2024-05-17 07:50:41] HITS file was successfully produced:
[2024-05-17 07:50:41] -rw------- 1 boinc boinc 237465678 May 17 07:49 shared/HITS.pool.root.1
[2024-05-17 07:50:41]  *** Contents of shared directory: ***
[2024-05-17 07:50:41] total 819308
[2024-05-17 07:50:41] -rw-r--r-- 2 boinc boinc 600257675 May 17 06:51 ATLAS.root_0
[2024-05-17 07:50:41] -rw-r--r-- 2 boinc boinc    479998 May 17 06:51 input.tar.gz
[2024-05-17 07:50:41] -rw-r--r-- 2 boinc boinc     17537 May 17 06:51 start_atlas.sh
[2024-05-17 07:50:41] -rw------- 1 boinc boinc 237465678 May 17 07:49 HITS.pool.root.1
[2024-05-17 07:50:41] -rw------- 1 boinc boinc    727040 May 17 07:50 result.tar.gz
07:50:43 (235125): run_atlas exited; CPU time 29090.220335
07:50:43 (235125): called boinc_finish(0)

</stderr_txt>
]]>

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