Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:27:34 (562675): wrapper (7.7.26015): starting
04:27:34 (562675): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 04:27:34] Arguments: --nthreads 4
[2024-05-18 04:27:34] Threads: 4
[2024-05-18 04:27:34] Checking for CVMFS
[2024-05-18 04:27:34] No cvmfs_config command found, will try listing directly
[2024-05-18 04:27:34] CVMFS is ok
[2024-05-18 04:27:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 04:27:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 04:27:34] Further information can be found at the LHC@home message board.
[2024-05-18 04:27:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 04:27:34] Checking for apptainer binary...
[2024-05-18 04:27:34] which: no apptainer in ((null))
[2024-05-18 04:27:34] apptainer is not installed, using version from CVMFS
[2024-05-18 04:27:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 04:27:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2024-05-18 04:27:35] apptainer works
[2024-05-18 04:27:35] Set ATHENA_PROC_NUMBER=4
[2024-05-18 04:27:35] Set ATHENA_CORE_NUMBER=4
[2024-05-18 04:27:35] Starting ATLAS job with PandaID=6207804834
[2024-05-18 04:27:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 06:13:08]  *** The last 200 lines of the pilot log: ***
[2024-05-18 06:13:08] 2024-05-18 04:12:51,808 | INFO     | intersect: -121387885694.50497
[2024-05-18 06:13:08] 2024-05-18 04:12:51,808 | INFO     | chi2: 3.9151086544584275
[2024-05-18 06:13:08] 2024-05-18 04:12:51,809 | INFO     | model: linear, x: [1715999289.0, 1715999350.0, 1715999411.0, 1715999472.0, 1715999533.0, 1715999594.0, 1715999655.0, 1715999716.0, 1715999777.0, 1715999838.0, 1715
[2024-05-18 06:13:08] 2024-05-18 04:12:51,809 | INFO     | sum of square deviations: 291817564.5
[2024-05-18 06:13:08] 2024-05-18 04:12:51,809 | INFO     | sum of deviations: 23279599884.999996
[2024-05-18 06:13:08] 2024-05-18 04:12:51,810 | INFO     | mean x: 1716002247.5
[2024-05-18 06:13:08] 2024-05-18 04:12:51,810 | INFO     | mean y: 2313006.5714285714
[2024-05-18 06:13:08] 2024-05-18 04:12:51,810 | INFO     | -- intersect: -136890905850.92723
[2024-05-18 06:13:08] 2024-05-18 04:12:51,810 | INFO     | intersect: -136890905850.92723
[2024-05-18 06:13:08] 2024-05-18 04:12:51,810 | INFO     | chi2: 3.91690976974169
[2024-05-18 06:13:08] 2024-05-18 04:12:51,810 | INFO     | current chi2=3.91690976974169 (change=-0.04600422216153231 %)
[2024-05-18 06:13:08] 2024-05-18 04:12:51,810 | INFO     | right removable region: 97
[2024-05-18 06:13:08] 2024-05-18 04:12:51,811 | INFO     | model: linear, x: [1715999594.0, 1715999655.0, 1715999716.0, 1715999777.0, 1715999838.0, 1715999899.0, 1715999960.0, 1716000021.0, 1716000082.0, 1716000143.0, 1716
[2024-05-18 06:13:08] 2024-05-18 04:12:51,811 | INFO     | sum of square deviations: 291817564.5
[2024-05-18 06:13:08] 2024-05-18 04:12:51,811 | INFO     | sum of deviations: 1869354790.5
[2024-05-18 06:13:08] 2024-05-18 04:12:51,811 | INFO     | mean x: 1716002552.5
[2024-05-18 06:13:08] 2024-05-18 04:12:51,812 | INFO     | mean y: 2386482.336734694
[2024-05-18 06:13:08] 2024-05-18 04:12:51,812 | INFO     | -- intersect: -10990158114.90975
[2024-05-18 06:13:08] 2024-05-18 04:12:51,812 | INFO     | intersect: -10990158114.90975
[2024-05-18 06:13:08] 2024-05-18 04:12:51,812 | INFO     | chi2: 1.4910813754172607
[2024-05-18 06:13:08] 2024-05-18 04:12:51,812 | INFO     | current chi2=1.4910813754172607 (change=61.91468725346218 %)
[2024-05-18 06:13:08] 2024-05-18 04:12:51,812 | INFO     | model: linear, x: [1715999899.0, 1715999960.0, 1716000021.0, 1716000082.0, 1716000143.0, 1716000204.0, 1716000265.0, 1716000326.0, 1716000387.0, 1716000448.0, 1716
[2024-05-18 06:13:08] 2024-05-18 04:12:51,813 | INFO     | sum of square deviations: 249388862.0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,813 | INFO     | sum of deviations: -14869198898.999998
[2024-05-18 06:13:08] 2024-05-18 04:12:51,813 | INFO     | mean x: 1716002705.0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,813 | INFO     | mean y: 2446682.2365591396
[2024-05-18 06:13:08] 2024-05-18 04:12:51,813 | INFO     | -- intersect: 102314896914.54492
[2024-05-18 06:13:08] 2024-05-18 04:12:51,814 | INFO     | intersect: 102314896914.54492
[2024-05-18 06:13:08] 2024-05-18 04:12:51,814 | INFO     | chi2: 0.1420152129193462
[2024-05-18 06:13:08] 2024-05-18 04:12:51,814 | INFO     | current chi2=0.1420152129193462 (change=90.4756899750287 %)
[2024-05-18 06:13:08] 2024-05-18 04:12:51,814 | INFO     | model: linear, x: [1716000204.0, 1716000265.0, 1716000326.0, 1716000387.0, 1716000448.0, 1716000509.0, 1716000570.0, 1716000631.0, 1716000692.0, 1716000753.0, 1716
[2024-05-18 06:13:08] 2024-05-18 04:12:51,814 | INFO     | sum of square deviations: 211285822.0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,815 | INFO     | sum of deviations: -14746851290.500002
[2024-05-18 06:13:08] 2024-05-18 04:12:51,815 | INFO     | mean x: 1716002857.5
[2024-05-18 06:13:08] 2024-05-18 04:12:51,815 | INFO     | mean y: 2445915.6931818184
[2024-05-18 06:13:08] 2024-05-18 04:12:51,815 | INFO     | -- intersect: 119772143257.8346
[2024-05-18 06:13:08] 2024-05-18 04:12:51,815 | INFO     | intersect: 119772143257.8346
[2024-05-18 06:13:08] 2024-05-18 04:12:51,815 | INFO     | chi2: 0.09668663761479684
[2024-05-18 06:13:08] 2024-05-18 04:12:51,816 | INFO     | current chi2=0.09668663761479684 (change=31.91811241397958 %)
[2024-05-18 06:13:08] 2024-05-18 04:12:51,816 | INFO     | model: linear, x: [1716000509.0, 1716000570.0, 1716000631.0, 1716000692.0, 1716000753.0, 1716000814.0, 1716000875.0, 1716000936.0, 1716000997.0, 1716001058.0, 1716
[2024-05-18 06:13:08] 2024-05-18 04:12:51,816 | INFO     | sum of square deviations: 177275882.0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,816 | INFO     | sum of deviations: -12322841006.999998
[2024-05-18 06:13:08] 2024-05-18 04:12:51,816 | INFO     | mean x: 1716003010.0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,817 | INFO     | mean y: 2435017.192771084
[2024-05-18 06:13:08] 2024-05-18 04:12:51,817 | INFO     | -- intersect: 119285622449.10428
[2024-05-18 06:13:08] 2024-05-18 04:12:51,817 | INFO     | intersect: 119285622449.10428
[2024-05-18 06:13:08] 2024-05-18 04:12:51,817 | INFO     | chi2: 0.09645751204624432
[2024-05-18 06:13:08] 2024-05-18 04:12:51,817 | INFO     | current chi2=0.09645751204624432 (change=0.2369774916212993 %)
[2024-05-18 06:13:08] 2024-05-18 04:12:51,817 | INFO     | left removable region: 40
[2024-05-18 06:13:08] 2024-05-18 04:12:51,817 | INFO     | model: linear, x: [1716001729.0, 1716001790.0, 1716001851.0, 1716001912.0, 1716001973.0, 1716002034.0, 1716002095.0, 1716002156.0, 1716002217.0, 1716002278.0, 1716
[2024-05-18 06:13:08] 2024-05-18 04:12:51,818 | INFO     | sum of square deviations: 57407588.0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,818 | INFO     | sum of deviations: -1775634543.0000002
[2024-05-18 06:13:08] 2024-05-18 04:12:51,818 | INFO     | mean x: 1716003437.0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,818 | INFO     | mean y: 2370718.49122807
[2024-05-18 06:13:08] 2024-05-18 04:12:51,818 | INFO     | -- intersect: 53078890474.79809
[2024-05-18 06:13:08] 2024-05-18 04:12:51,818 | INFO     | intersect: 53078890474.79809
[2024-05-18 06:13:08] 2024-05-18 04:12:51,818 | INFO     | chi2: 0.04581415493169708
[2024-05-18 06:13:08] 2024-05-18 04:12:51,819 | INFO     | -- intersect: 53078890474.79809
[2024-05-18 06:13:08] 2024-05-18 04:12:51,819 | INFO     | current memory leak: -30.93 B/s (using 57 data points, chi2=0.05)
[2024-05-18 06:13:08] 2024-05-18 04:12:51,819 | INFO     | ..............................
[2024-05-18 06:13:08] 2024-05-18 04:12:51,819 | INFO     | . Timing measurements:
[2024-05-18 06:13:08] 2024-05-18 04:12:51,819 | INFO     | . get job = 0 s
[2024-05-18 06:13:08] 2024-05-18 04:12:51,819 | INFO     | . initial setup = 1 s
[2024-05-18 06:13:08] 2024-05-18 04:12:51,820 | INFO     | . payload setup = 5 s
[2024-05-18 06:13:08] 2024-05-18 04:12:51,820 | INFO     | . stage-in = 0 s
[2024-05-18 06:13:08] 2024-05-18 04:12:51,820 | INFO     | . payload execution = 6276 s
[2024-05-18 06:13:08] 2024-05-18 04:12:51,820 | INFO     | . stage-out = 0 s
[2024-05-18 06:13:08] 2024-05-18 04:12:51,820 | INFO     | . log creation = 0 s
[2024-05-18 06:13:08] 2024-05-18 04:12:51,820 | INFO     | ..............................
[2024-05-18 06:13:08] 2024-05-18 04:12:51,926 | INFO     | 
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | job summary report
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | --------------------------------------------------
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | PanDA job id: 6207804834
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | task id: 38776104
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | errors: (none)
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | pilot state: finished 
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | transexitcode: 0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | exeerrorcode: 0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | exeerrordiag: 
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | exitcode: 0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | exitmsg: OK
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | cpuconsumptiontime: 22480 s
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | nevents: 400
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | neventsw: 0
[2024-05-18 06:13:08] 2024-05-18 04:12:51,927 | INFO     | pid: 574993
[2024-05-18 06:13:08] 2024-05-18 04:12:51,928 | INFO     | pgrp: 574993
[2024-05-18 06:13:08] 2024-05-18 04:12:51,928 | INFO     | corecount: 4
[2024-05-18 06:13:08] 2024-05-18 04:12:51,928 | INFO     | event service: False
[2024-05-18 06:13:08] 2024-05-18 04:12:51,928 | INFO     | sizes: {0: 2392220, 5: 2392426, 11: 2392482, 6285: 2419469, 6287: 2428509, 6293: 2428623}
[2024-05-18 06:13:08] 2024-05-18 04:12:51,928 | INFO     | --------------------------------------------------
[2024-05-18 06:13:08] 2024-05-18 04:12:51,928 | INFO     | 
[2024-05-18 06:13:08] 2024-05-18 04:12:51,928 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/1
[2024-05-18 06:13:08] 2024-05-18 04:12:51,949 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,949 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,949 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,949 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,950 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 06:13:08] 2024-05-18 04:12:51,951 | INFO     | job 6207804834 has completed (purged errors)
[2024-05-18 06:13:08] 2024-05-18 04:12:51,951 | INFO     | overall cleanup function is called
[2024-05-18 06:13:08] 2024-05-18 04:12:52,958 | INFO     | --- collectZombieJob: --- 10, [574993]
[2024-05-18 06:13:08] 2024-05-18 04:12:52,958 | INFO     | zombie collector waiting for pid 574993
[2024-05-18 06:13:08] 2024-05-18 04:12:52,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 06:13:08] 2024-05-18 04:12:53,964 | INFO     | collected zombie processes
[2024-05-18 06:13:08] 2024-05-18 04:12:53,964 | INFO     | will now attempt to kill all subprocesses of pid=574993
[2024-05-18 06:13:08] 2024-05-18 04:12:54,225 | INFO     | process IDs to be killed: [574993] (in reverse order)
[2024-05-18 06:13:08] 2024-05-18 04:12:54,371 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 06:13:08] 2024-05-18 04:12:54,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 06:13:08] 2024-05-18 04:12:54,389 | INFO     | did not find any defunct processes belonging to 574993
[2024-05-18 06:13:08] 2024-05-18 04:12:54,405 | INFO     | did not find any defunct processes belonging to 574993
[2024-05-18 06:13:08] 2024-05-18 04:12:54,405 | INFO     | ready for new job
[2024-05-18 06:13:08] 2024-05-18 04:12:54,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 06:13:08] 2024-05-18 04:12:54,406 | INFO     | *************************************
[2024-05-18 06:13:08] 2024-05-18 04:12:54,406 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 06:13:08] 2024-05-18 04:12:54,406 | INFO     | *************************************
[2024-05-18 06:13:08] 2024-05-18 04:12:54,406 | INFO     | 
[2024-05-18 06:13:08] 2024-05-18 04:12:54,412 | INFO     | architecture information:
[2024-05-18 06:13:08] 2024-05-18 04:12:54,413 | INFO     | executing command: cat /etc/os-release
[2024-05-18 06:13:08] 2024-05-18 04:12:54,427 | INFO     | cat /etc/os-release:
[2024-05-18 06:13:08] NAME="CentOS Linux"
[2024-05-18 06:13:08] VERSION="7 (Core)"
[2024-05-18 06:13:08] ID="centos"
[2024-05-18 06:13:08] ID_LIKE="rhel fedora"
[2024-05-18 06:13:08] VERSION_ID="7"
[2024-05-18 06:13:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 06:13:08] ANSI_COLOR="0;31"
[2024-05-18 06:13:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 06:13:08] HOME_URL="https://www.centos.org/"
[2024-05-18 06:13:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 06:13:08] 
[2024-05-18 06:13:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 06:13:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 06:13:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 06:13:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 06:13:08] 
[2024-05-18 06:13:08] 2024-05-18 04:12:54,428 | INFO     | *************************************
[2024-05-18 06:13:08] 2024-05-18 04:12:54,931 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/1
[2024-05-18 06:13:08] 2024-05-18 04:12:54,949 | INFO     | sufficient remaining disk space (3102511988736 B)
[2024-05-18 06:13:08] 2024-05-18 04:12:54,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 06:13:08] 2024-05-18 04:12:54,949 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 06:13:08] 2024-05-18 04:12:54,949 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 06:13:08] 2024-05-18 04:12:54,950 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 06:13:08] 2024-05-18 04:12:54,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 06:13:08] 2024-05-18 04:12:54,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 06:13:08] 2024-05-18 04:12:55,246 | INFO     | all data control threads have been joined
[2024-05-18 06:13:08] 2024-05-18 04:12:55,737 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:13:08] 2024-05-18 04:12:55,737 | INFO     | aborting loop
[2024-05-18 06:13:08] 2024-05-18 04:12:55,952 | INFO     | [job] retrieve thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:56,039 | INFO     | all payload control threads have been joined
[2024-05-18 06:13:08] 2024-05-18 04:12:56,094 | INFO     | all job control threads have been joined
[2024-05-18 06:13:08] 2024-05-18 04:12:56,096 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:56,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 06:13:08] 2024-05-18 04:12:56,157 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:56,243 | INFO     | [payload] validate_post thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:56,253 | INFO     | [data] control thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:56,693 | INFO     | [job] validate thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:56,738 | INFO     | [job] job monitor thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:56,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 06:13:08] 2024-05-18 04:12:56,760 | INFO     | [data] copytool_in thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:56,904 | INFO     | [payload] failed_post thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:56,936 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 06:13:08] 2024-05-18 04:12:56,979 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:57,020 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:57,042 | INFO     | [payload] control thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:57,100 | INFO     | [job] control thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:57,942 | INFO     | [job] queue monitor thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:12:58,144 | INFO     | [data] copytool_out thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:13:00,747 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 06:13:08] 2024-05-18 04:13:02,424 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47777490764864)>', '<ExcThread(monitor, started 47777662015232)>']
[2024-05-18 06:13:08] 2024-05-18 04:13:02,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 06:13:08] 2024-05-18 04:13:02,991 | INFO     | [monitor] control thread has ended
[2024-05-18 06:13:08] 2024-05-18 04:13:07,450 | INFO     | all workflow threads have been joined
[2024-05-18 06:13:08] 2024-05-18 04:13:07,450 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 06:13:08] 2024-05-18 04:13:07,451 | INFO     | traces error code: 0
[2024-05-18 06:13:08] 2024-05-18 04:13:07,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 06:13:08] 2024-05-18 04:13:07,536 [wrapper] ==== pilot stdout END ====
[2024-05-18 06:13:08] 2024-05-18 04:13:07,538 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 06:13:08] 2024-05-18 04:13:07,540 [wrapper] pilotpid: 567357
[2024-05-18 06:13:08] 2024-05-18 04:13:07,542 [wrapper] Pilot exit status: 0
[2024-05-18 06:13:08] 2024-05-18 04:13:07,551 [wrapper] pandaids: 6207804834
[2024-05-18 06:13:08] 2024-05-18 04:13:07,665 [wrapper] cleanup: SIGTERM to supervisor_pilot  867984 567358
[2024-05-18 06:13:08] 2024-05-18 04:13:07,667 [wrapper] Test setup, not cleaning
[2024-05-18 06:13:08] 2024-05-18 04:13:07,668 [wrapper] ==== wrapper stdout END ====
[2024-05-18 06:13:08] 2024-05-18 04:13:07,669 [wrapper] ==== wrapper stderr END ====
[2024-05-18 06:13:08] 2024-05-18 04:13:07,672 [wrapper] apfmon messages muted
[2024-05-18 06:13:08]  *** Error codes and diagnostics ***
[2024-05-18 06:13:08]     "exeErrorCode": 0,
[2024-05-18 06:13:08]     "exeErrorDiag": "",
[2024-05-18 06:13:08]     "pilotErrorCode": 0,
[2024-05-18 06:13:08]     "pilotErrorDiag": "",
[2024-05-18 06:13:08]  *** Listing of results directory ***
[2024-05-18 06:13:08] total 820148
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc    467845 May 17 08:31 pilot3.tar.gz
[2024-05-18 06:13:08] -rwx------ 1 boinc boinc     32251 May 17 08:44 runpilot2-wrapper.sh
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc      5633 May 17 08:44 queuedata.json
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc       100 May 18 04:27 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 06:13:08] -rwxr-xr-x 1 boinc boinc      7986 May 18 04:27 run_atlas
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc       105 May 18 04:27 job.xml
[2024-05-18 06:13:08] -rw-r--r-- 2 boinc boinc     17537 May 18 04:27 start_atlas.sh
[2024-05-18 06:13:08] drwxrwx--x 2 boinc boinc      4096 May 18 04:27 shared
[2024-05-18 06:13:08] -rw-r--r-- 2 boinc boinc    479999 May 18 04:27 input.tar.gz
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc      6646 May 18 04:27 init_data.xml
[2024-05-18 06:13:08] -rw-r--r-- 2 boinc boinc 598069637 May 18 04:27 EVNT.38776100._000450.pool.root.1
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc         0 May 18 04:27 boinc_lockfile
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc      2645 May 18 04:27 pandaJob.out
[2024-05-18 06:13:08] -rw------- 1 boinc boinc       424 May 18 04:27 setup.sh.local
[2024-05-18 06:13:08] -rw------- 1 boinc boinc   1019073 May 18 04:27 agis_schedconf.cvmfs.json
[2024-05-18 06:13:08] -rw------- 1 boinc boinc         0 May 18 04:27 agis_ddmendpoints.agis.ALL.json
[2024-05-18 06:13:08] -rw------- 1 boinc boinc   1324701 May 18 04:27 cric_ddmendpoints.json
[2024-05-18 06:13:08] drwx------ 4 boinc boinc      4096 May 18 04:27 pilot3
[2024-05-18 06:13:08] -rw------- 1 boinc boinc        95 May 18 06:12 pilot_heartbeat.json
[2024-05-18 06:13:08] -rw------- 1 boinc boinc 236418861 May 18 06:12 HITS.38776104._012528.pool.root.1
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc       530 May 18 06:12 boinc_task_state.xml
[2024-05-18 06:13:08] -rw------- 1 boinc boinc      1041 May 18 06:12 memory_monitor_summary.json
[2024-05-18 06:13:08] -rw------- 1 boinc boinc    256302 May 18 06:12 log.38776104._012528.job.log.tgz.1
[2024-05-18 06:13:08] -rw------- 1 boinc boinc      7724 May 18 06:12 heartbeat.json
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc      8192 May 18 06:12 boinc_mmap_file
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc        27 May 18 06:12 wrapper_checkpoint.txt
[2024-05-18 06:13:08] -rw------- 1 boinc boinc      4346 May 18 06:13 pilotlog.txt
[2024-05-18 06:13:08] -rw------- 1 boinc boinc    650840 May 18 06:13 log.38776104._012528.job.log.1
[2024-05-18 06:13:08] -rw------- 1 boinc boinc       357 May 18 06:13 output.list
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc       620 May 18 06:13 runtime_log
[2024-05-18 06:13:08] -rw------- 1 boinc boinc    921600 May 18 06:13 result.tar.gz
[2024-05-18 06:13:08] -rw------- 1 boinc boinc       656 May 18 06:13 xFOMDmpV6R5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm90KKDmwWrcrm.diag
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc     11428 May 18 06:13 runtime_log.err
[2024-05-18 06:13:08] -rw-r--r-- 1 boinc boinc     21315 May 18 06:13 stderr.txt
[2024-05-18 06:13:08] HITS file was successfully produced:
[2024-05-18 06:13:08] -rw------- 1 boinc boinc 236418861 May 18 06:12 shared/HITS.pool.root.1
[2024-05-18 06:13:08]  *** Contents of shared directory: ***
[2024-05-18 06:13:08] total 816336
[2024-05-18 06:13:08] -rw-r--r-- 2 boinc boinc     17537 May 18 04:27 start_atlas.sh
[2024-05-18 06:13:08] -rw-r--r-- 2 boinc boinc    479999 May 18 04:27 input.tar.gz
[2024-05-18 06:13:08] -rw-r--r-- 2 boinc boinc 598069637 May 18 04:27 ATLAS.root_0
[2024-05-18 06:13:08] -rw------- 1 boinc boinc 236418861 May 18 06:12 HITS.pool.root.1
[2024-05-18 06:13:08] -rw------- 1 boinc boinc    921600 May 18 06:13 result.tar.gz
06:13:10 (562675): run_atlas exited; CPU time 22339.434326
06:13:10 (562675): called boinc_finish(0)

</stderr_txt>
]]>

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