Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:57:22 (3052088): wrapper (7.7.26015): starting
08:57:22 (3052088): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 08:57:22] Arguments: --nthreads 4
[2024-05-20 08:57:22] Threads: 4
[2024-05-20 08:57:22] Checking for CVMFS
[2024-05-20 08:57:22] No cvmfs_config command found, will try listing directly
[2024-05-20 08:57:22] CVMFS is ok
[2024-05-20 08:57:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 08:57:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 08:57:22] Further information can be found at the LHC@home message board.
[2024-05-20 08:57:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 08:57:22] Checking for apptainer binary...
[2024-05-20 08:57:22] which: no apptainer in ((null))
[2024-05-20 08:57:22] apptainer is not installed, using version from CVMFS
[2024-05-20 08:57:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 08:57:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2024-05-20 08:57:22] apptainer works
[2024-05-20 08:57:22] Set ATHENA_PROC_NUMBER=4
[2024-05-20 08:57:22] Set ATHENA_CORE_NUMBER=4
[2024-05-20 08:57:23] Starting ATLAS job with PandaID=6207804265
[2024-05-20 08:57:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 11:53:02]  *** The last 200 lines of the pilot log: ***
[2024-05-20 11:53:02] 2024-05-20 09:52:39,918 | INFO     | chi2: 1.44512147979772
[2024-05-20 11:53:02] 2024-05-20 09:52:39,918 | INFO     | current chi2=1.44512147979772 (change=62.22005490013226 %)
[2024-05-20 11:53:02] 2024-05-20 09:52:39,918 | INFO     | model: linear, x: [1716188882.0, 1716188943.0, 1716189004.0, 1716189065.0, 1716189126.0, 1716189187.0, 1716189248.0, 1716189309.0, 1716189370.0, 1716189431.0, 1716
[2024-05-20 11:53:02] 2024-05-20 09:52:39,919 | INFO     | sum of square deviations: 1318277740.5
[2024-05-20 11:53:02] 2024-05-20 09:52:39,919 | INFO     | sum of deviations: 7522226529.0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,919 | INFO     | mean x: 1716193792.5
[2024-05-20 11:53:02] 2024-05-20 09:52:39,919 | INFO     | mean y: 2339291.7407407407
[2024-05-20 11:53:02] 2024-05-20 09:52:39,919 | INFO     | -- intersect: -9790436599.288288
[2024-05-20 11:53:02] 2024-05-20 09:52:39,919 | INFO     | intersect: -9790436599.288288
[2024-05-20 11:53:02] 2024-05-20 09:52:39,920 | INFO     | chi2: 0.06895036587402638
[2024-05-20 11:53:02] 2024-05-20 09:52:39,920 | INFO     | current chi2=0.06895036587402638 (change=95.228749496985 %)
[2024-05-20 11:53:02] 2024-05-20 09:52:39,920 | INFO     | model: linear, x: [1716189187.0, 1716189248.0, 1716189309.0, 1716189370.0, 1716189431.0, 1716189492.0, 1716189553.0, 1716189614.0, 1716189675.0, 1716189736.0, 1716
[2024-05-20 11:53:02] 2024-05-20 09:52:39,920 | INFO     | sum of square deviations: 1199940638.0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,921 | INFO     | sum of deviations: 3148943098.0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,921 | INFO     | mean x: 1716193945.0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,921 | INFO     | mean y: 2344816.159235669
[2024-05-20 11:53:02] 2024-05-20 09:52:39,921 | INFO     | -- intersect: -4501375540.3282175
[2024-05-20 11:53:02] 2024-05-20 09:52:39,921 | INFO     | intersect: -4501375540.3282175
[2024-05-20 11:53:02] 2024-05-20 09:52:39,921 | INFO     | chi2: 0.0026476442490784916
[2024-05-20 11:53:02] 2024-05-20 09:52:39,921 | INFO     | current chi2=0.0026476442490784916 (change=96.16007222656977 %)
[2024-05-20 11:53:02] 2024-05-20 09:52:39,921 | INFO     | model: linear, x: [1716189492.0, 1716189553.0, 1716189614.0, 1716189675.0, 1716189736.0, 1716189797.0, 1716189858.0, 1716189919.0, 1716189980.0, 1716190041.0, 1716
[2024-05-20 11:53:02] 2024-05-20 09:52:39,921 | INFO     | sum of square deviations: 1088905998.0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,922 | INFO     | sum of deviations: 3280364670.0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,922 | INFO     | mean x: 1716194097.5
[2024-05-20 11:53:02] 2024-05-20 09:52:39,922 | INFO     | mean y: 2344657.1447368423
[2024-05-20 11:53:02] 2024-05-20 09:52:39,922 | INFO     | -- intersect: -5167745777.329603
[2024-05-20 11:53:02] 2024-05-20 09:52:39,922 | INFO     | intersect: -5167745777.329603
[2024-05-20 11:53:02] 2024-05-20 09:52:39,922 | INFO     | chi2: 0.0005850916863379697
[2024-05-20 11:53:02] 2024-05-20 09:52:39,922 | INFO     | current chi2=0.0005850916863379697 (change=77.90142363190938 %)
[2024-05-20 11:53:02] 2024-05-20 09:52:39,923 | INFO     | model: linear, x: [1716189797.0, 1716189858.0, 1716189919.0, 1716189980.0, 1716190041.0, 1716190102.0, 1716190163.0, 1716190224.0, 1716190285.0, 1716190346.0, 1716
[2024-05-20 11:53:02] 2024-05-20 09:52:39,923 | INFO     | sum of square deviations: 984941258.0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,923 | INFO     | sum of deviations: 2496270304.0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,923 | INFO     | mean x: 1716194250.0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,923 | INFO     | mean y: 2345803.224489796
[2024-05-20 11:53:02] 2024-05-20 09:52:39,923 | INFO     | -- intersect: -4347238202.292468
[2024-05-20 11:53:02] 2024-05-20 09:52:39,923 | INFO     | intersect: -4347238202.292468
[2024-05-20 11:53:02] 2024-05-20 09:52:39,924 | INFO     | chi2: 0.00011127341867543769
[2024-05-20 11:53:02] 2024-05-20 09:52:39,924 | INFO     | current chi2=0.00011127341867543769 (change=80.98188347677834 %)
[2024-05-20 11:53:02] 2024-05-20 09:52:39,924 | INFO     | model: linear, x: [1716190102.0, 1716190163.0, 1716190224.0, 1716190285.0, 1716190346.0, 1716190407.0, 1716190468.0, 1716190529.0, 1716190590.0, 1716190651.0, 1716
[2024-05-20 11:53:02] 2024-05-20 09:52:39,924 | INFO     | sum of square deviations: 887813855.5
[2024-05-20 11:53:02] 2024-05-20 09:52:39,924 | INFO     | sum of deviations: 2222662215.500001
[2024-05-20 11:53:02] 2024-05-20 09:52:39,925 | INFO     | mean x: 1716194402.5
[2024-05-20 11:53:02] 2024-05-20 09:52:39,925 | INFO     | mean y: 2346230.443661972
[2024-05-20 11:53:02] 2024-05-20 09:52:39,925 | INFO     | -- intersect: -4294185558.57768
[2024-05-20 11:53:02] 2024-05-20 09:52:39,925 | INFO     | intersect: -4294185558.57768
[2024-05-20 11:53:02] 2024-05-20 09:52:39,925 | INFO     | chi2: 8.559835547794808e-05
[2024-05-20 11:53:02] 2024-05-20 09:52:39,925 | INFO     | current chi2=8.559835547794808e-05 (change=23.073851332256304 %)
[2024-05-20 11:53:02] 2024-05-20 09:52:39,925 | INFO     | left removable region: 60
[2024-05-20 11:53:02] 2024-05-20 09:52:39,925 | INFO     | model: linear, x: [1716191932.0, 1716191993.0, 1716192054.0, 1716192115.0, 1716192176.0, 1716192237.0, 1716192298.0, 1716192359.0, 1716192420.0, 1716192481.0, 1716
[2024-05-20 11:53:02] 2024-05-20 09:52:39,925 | INFO     | sum of square deviations: 369281342.5
[2024-05-20 11:53:02] 2024-05-20 09:52:39,926 | INFO     | sum of deviations: 935305802.0000002
[2024-05-20 11:53:02] 2024-05-20 09:52:39,926 | INFO     | mean x: 1716195134.5
[2024-05-20 11:53:02] 2024-05-20 09:52:39,926 | INFO     | mean y: 2348374.6415094337
[2024-05-20 11:53:02] 2024-05-20 09:52:39,926 | INFO     | -- intersect: -4344384270.433894
[2024-05-20 11:53:02] 2024-05-20 09:52:39,926 | INFO     | intersect: -4344384270.433894
[2024-05-20 11:53:02] 2024-05-20 09:52:39,926 | INFO     | chi2: 6.608298214035748e-05
[2024-05-20 11:53:02] 2024-05-20 09:52:39,926 | INFO     | -- intersect: -4344384270.433894
[2024-05-20 11:53:02] 2024-05-20 09:52:39,926 | INFO     | current memory leak: 2.53 B/s (using 106 data points, chi2=0.00)
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | ..............................
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | . Timing measurements:
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | . get job = 0 s
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | . initial setup = 1 s
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | . payload setup = 4 s
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | . stage-in = 0 s
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | . payload execution = 10481 s
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | . stage-out = 0 s
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | . log creation = 0 s
[2024-05-20 11:53:02] 2024-05-20 09:52:39,927 | INFO     | ..............................
[2024-05-20 11:53:02] 2024-05-20 09:52:39,985 | INFO     | 
[2024-05-20 11:53:02] 2024-05-20 09:52:39,986 | INFO     | job summary report
[2024-05-20 11:53:02] 2024-05-20 09:52:39,986 | INFO     | --------------------------------------------------
[2024-05-20 11:53:02] 2024-05-20 09:52:39,986 | INFO     | PanDA job id: 6207804265
[2024-05-20 11:53:02] 2024-05-20 09:52:39,986 | INFO     | task id: 38776125
[2024-05-20 11:53:02] 2024-05-20 09:52:39,986 | INFO     | errors: (none)
[2024-05-20 11:53:02] 2024-05-20 09:52:39,986 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 11:53:02] 2024-05-20 09:52:39,986 | INFO     | pilot state: finished 
[2024-05-20 11:53:02] 2024-05-20 09:52:39,987 | INFO     | transexitcode: 0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,987 | INFO     | exeerrorcode: 0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,987 | INFO     | exeerrordiag: 
[2024-05-20 11:53:02] 2024-05-20 09:52:39,987 | INFO     | exitcode: 0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,987 | INFO     | exitmsg: OK
[2024-05-20 11:53:02] 2024-05-20 09:52:39,987 | INFO     | cpuconsumptiontime: 38945 s
[2024-05-20 11:53:02] 2024-05-20 09:52:39,987 | INFO     | nevents: 400
[2024-05-20 11:53:02] 2024-05-20 09:52:39,987 | INFO     | neventsw: 0
[2024-05-20 11:53:02] 2024-05-20 09:52:39,988 | INFO     | pid: 3063254
[2024-05-20 11:53:02] 2024-05-20 09:52:39,988 | INFO     | pgrp: 3063254
[2024-05-20 11:53:02] 2024-05-20 09:52:39,988 | INFO     | corecount: 4
[2024-05-20 11:53:02] 2024-05-20 09:52:39,988 | INFO     | event service: False
[2024-05-20 11:53:02] 2024-05-20 09:52:39,988 | INFO     | sizes: {0: 2391352, 1: 2392287, 4: 2392493, 12: 2392521, 10488: 2421493, 10489: 2430659, 10495: 2430773}
[2024-05-20 11:53:02] 2024-05-20 09:52:39,988 | INFO     | --------------------------------------------------
[2024-05-20 11:53:02] 2024-05-20 09:52:39,988 | INFO     | 
[2024-05-20 11:53:02] 2024-05-20 09:52:39,989 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-05-20 11:53:02] 2024-05-20 09:52:40,009 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,009 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,009 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,009 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,011 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 11:53:02] 2024-05-20 09:52:40,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,011 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 11:53:02] 2024-05-20 09:52:40,012 | INFO     | job 6207804265 has completed (purged errors)
[2024-05-20 11:53:02] 2024-05-20 09:52:40,012 | INFO     | overall cleanup function is called
[2024-05-20 11:53:02] 2024-05-20 09:52:41,020 | INFO     | --- collectZombieJob: --- 10, [3063254]
[2024-05-20 11:53:02] 2024-05-20 09:52:41,020 | INFO     | zombie collector waiting for pid 3063254
[2024-05-20 11:53:02] 2024-05-20 09:52:41,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 11:53:02] 2024-05-20 09:52:42,025 | INFO     | collected zombie processes
[2024-05-20 11:53:02] 2024-05-20 09:52:42,026 | INFO     | will now attempt to kill all subprocesses of pid=3063254
[2024-05-20 11:53:02] 2024-05-20 09:52:42,156 | INFO     | process IDs to be killed: [3063254] (in reverse order)
[2024-05-20 11:53:02] 2024-05-20 09:52:42,235 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 11:53:02] 2024-05-20 09:52:42,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 11:53:02] 2024-05-20 09:52:42,244 | INFO     | did not find any defunct processes belonging to 3063254
[2024-05-20 11:53:02] 2024-05-20 09:52:42,252 | INFO     | did not find any defunct processes belonging to 3063254
[2024-05-20 11:53:02] 2024-05-20 09:52:42,252 | INFO     | ready for new job
[2024-05-20 11:53:02] 2024-05-20 09:52:42,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 11:53:02] 2024-05-20 09:52:42,255 | INFO     | *************************************
[2024-05-20 11:53:02] 2024-05-20 09:52:42,255 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 11:53:02] 2024-05-20 09:52:42,255 | INFO     | *************************************
[2024-05-20 11:53:02] 2024-05-20 09:52:42,255 | INFO     | 
[2024-05-20 11:53:02] 2024-05-20 09:52:42,258 | INFO     | architecture information:
[2024-05-20 11:53:02] 2024-05-20 09:52:42,258 | INFO     | executing command: cat /etc/os-release
[2024-05-20 11:53:02] 2024-05-20 09:52:42,275 | INFO     | cat /etc/os-release:
[2024-05-20 11:53:02] NAME="CentOS Linux"
[2024-05-20 11:53:02] VERSION="7 (Core)"
[2024-05-20 11:53:02] ID="centos"
[2024-05-20 11:53:02] ID_LIKE="rhel fedora"
[2024-05-20 11:53:02] VERSION_ID="7"
[2024-05-20 11:53:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 11:53:02] ANSI_COLOR="0;31"
[2024-05-20 11:53:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 11:53:02] HOME_URL="https://www.centos.org/"
[2024-05-20 11:53:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 11:53:02] 
[2024-05-20 11:53:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 11:53:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 11:53:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 11:53:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 11:53:02] 
[2024-05-20 11:53:02] 2024-05-20 09:52:42,275 | INFO     | *************************************
[2024-05-20 11:53:02] 2024-05-20 09:52:42,779 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-05-20 11:53:02] 2024-05-20 09:52:42,800 | INFO     | sufficient remaining disk space (1622000271360 B)
[2024-05-20 11:53:02] 2024-05-20 09:52:42,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 11:53:02] 2024-05-20 09:52:42,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 11:53:02] 2024-05-20 09:52:42,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 11:53:02] 2024-05-20 09:52:42,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 11:53:02] 2024-05-20 09:52:42,801 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 11:53:02] 2024-05-20 09:52:42,802 | INFO     | aborting loop
[2024-05-20 11:53:02] 2024-05-20 09:52:42,802 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 11:53:02] 2024-05-20 09:52:42,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 11:53:02] 2024-05-20 09:52:42,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 11:53:02] 2024-05-20 09:52:43,251 | INFO     | all data control threads have been joined
[2024-05-20 11:53:02] 2024-05-20 09:52:43,618 | INFO     | all job control threads have been joined
[2024-05-20 11:53:02] 2024-05-20 09:52:43,806 | INFO     | [job] retrieve thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:43,807 | INFO     | [job] job monitor thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:44,019 | INFO     | [payload] failed_post thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:44,025 | INFO     | all payload control threads have been joined
[2024-05-20 11:53:02] 2024-05-20 09:52:44,257 | INFO     | [data] control thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:44,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 11:53:02] 2024-05-20 09:52:44,492 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:44,623 | INFO     | [job] control thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:44,700 | INFO     | [job] validate thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:44,807 | INFO     | [data] copytool_out thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:44,892 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:44,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 11:53:02] 2024-05-20 09:52:45,014 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:45,030 | INFO     | [payload] control thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:45,225 | INFO     | [data] copytool_in thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:45,250 | INFO     | [payload] validate_post thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:46,002 | INFO     | [job] queue monitor thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:48,394 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:53,816 | INFO     | job.realtimelogging is not enabled
[2024-05-20 11:53:02] 2024-05-20 09:52:54,821 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 11:53:02] 2024-05-20 09:52:56,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47822080508992)>', '<ExcThread(monitor, started 47822462281472)>']
[2024-05-20 11:53:02] 2024-05-20 09:52:56,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 11:53:02] 2024-05-20 09:52:56,873 | INFO     | [monitor] control thread has ended
[2024-05-20 11:53:02] 2024-05-20 09:53:01,608 | INFO     | all workflow threads have been joined
[2024-05-20 11:53:02] 2024-05-20 09:53:01,608 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 11:53:02] 2024-05-20 09:53:01,609 | INFO     | traces error code: 0
[2024-05-20 11:53:02] 2024-05-20 09:53:01,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 11:53:02] 2024-05-20 09:53:01,711 [wrapper] ==== pilot stdout END ====
[2024-05-20 11:53:02] 2024-05-20 09:53:01,714 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 11:53:02] 2024-05-20 09:53:01,716 [wrapper] pilotpid: 3056393
[2024-05-20 11:53:02] 2024-05-20 09:53:01,719 [wrapper] Pilot exit status: 0
[2024-05-20 11:53:02] 2024-05-20 09:53:01,728 [wrapper] pandaids: 6207804265
[2024-05-20 11:53:02] 2024-05-20 09:53:01,787 [wrapper] cleanup: SIGTERM to supervisor_pilot 3293822 3056394
[2024-05-20 11:53:02] 2024-05-20 09:53:01,789 [wrapper] Test setup, not cleaning
[2024-05-20 11:53:02] 2024-05-20 09:53:01,791 [wrapper] ==== wrapper stdout END ====
[2024-05-20 11:53:02] 2024-05-20 09:53:01,793 [wrapper] ==== wrapper stderr END ====
[2024-05-20 11:53:02] 2024-05-20 09:53:01,797 [wrapper] apfmon messages muted
[2024-05-20 11:53:02]  *** Error codes and diagnostics ***
[2024-05-20 11:53:02]     "exeErrorCode": 0,
[2024-05-20 11:53:02]     "exeErrorDiag": "",
[2024-05-20 11:53:02]     "pilotErrorCode": 0,
[2024-05-20 11:53:02]     "pilotErrorDiag": "",
[2024-05-20 11:53:02]  *** Listing of results directory ***
[2024-05-20 11:53:02] total 835648
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc      5633 May 17 08:30 queuedata.json
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc    467845 May 17 08:31 pilot3.tar.gz
[2024-05-20 11:53:02] -rwx------ 1 boinc boinc     32251 May 17 08:32 runpilot2-wrapper.sh
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc       100 May 20 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 11:53:02] -rwxr-xr-x 1 boinc boinc      7986 May 20 08:57 run_atlas
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc       105 May 20 08:57 job.xml
[2024-05-20 11:53:02] -rw-r--r-- 2 boinc boinc 604568299 May 20 08:57 EVNT.38776119._000400.pool.root.1
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc      6457 May 20 08:57 init_data.xml
[2024-05-20 11:53:02] drwxrwx--x 2 boinc boinc      4096 May 20 08:57 shared
[2024-05-20 11:53:02] -rw-r--r-- 2 boinc boinc    480014 May 20 08:57 input.tar.gz
[2024-05-20 11:53:02] -rw-r--r-- 2 boinc boinc     17537 May 20 08:57 start_atlas.sh
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc         0 May 20 08:57 boinc_lockfile
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc      2635 May 20 08:57 pandaJob.out
[2024-05-20 11:53:02] -rw------- 1 boinc boinc       424 May 20 08:57 setup.sh.local
[2024-05-20 11:53:02] -rw------- 1 boinc boinc   1013883 May 20 08:57 agis_schedconf.cvmfs.json
[2024-05-20 11:53:02] -rw------- 1 boinc boinc         0 May 20 08:57 agis_ddmendpoints.agis.ALL.json
[2024-05-20 11:53:02] -rw------- 1 boinc boinc   1324701 May 20 08:57 cric_ddmendpoints.json
[2024-05-20 11:53:02] drwx------ 4 boinc boinc      4096 May 20 08:57 pilot3
[2024-05-20 11:53:02] -rw------- 1 boinc boinc        95 May 20 11:51 pilot_heartbeat.json
[2024-05-20 11:53:02] -rw------- 1 boinc boinc 244749453 May 20 11:51 HITS.38776125._014503.pool.root.1
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc       532 May 20 11:52 boinc_task_state.xml
[2024-05-20 11:53:02] -rw------- 1 boinc boinc      1050 May 20 11:52 memory_monitor_summary.json
[2024-05-20 11:53:02] -rw------- 1 boinc boinc    296900 May 20 11:52 log.38776125._014503.job.log.tgz.1
[2024-05-20 11:53:02] -rw------- 1 boinc boinc      7766 May 20 11:52 heartbeat.json
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc        28 May 20 11:52 wrapper_checkpoint.txt
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc      8192 May 20 11:52 boinc_mmap_file
[2024-05-20 11:53:02] -rw------- 1 boinc boinc      4417 May 20 11:53 pilotlog.txt
[2024-05-20 11:53:02] -rw------- 1 boinc boinc   1132244 May 20 11:53 log.38776125._014503.job.log.1
[2024-05-20 11:53:02] -rw------- 1 boinc boinc       357 May 20 11:53 output.list
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc       620 May 20 11:53 runtime_log
[2024-05-20 11:53:02] -rw------- 1 boinc boinc   1443840 May 20 11:53 result.tar.gz
[2024-05-20 11:53:02] -rw------- 1 boinc boinc       658 May 20 11:53 sZvLDmYJ6R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmTeQKDmqBdkXm.diag
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc     11410 May 20 11:53 runtime_log.err
[2024-05-20 11:53:02] -rw-r--r-- 1 boinc boinc     21382 May 20 11:53 stderr.txt
[2024-05-20 11:53:02] HITS file was successfully produced:
[2024-05-20 11:53:02] -rw------- 1 boinc boinc 244749453 May 20 11:51 shared/HITS.pool.root.1
[2024-05-20 11:53:02]  *** Contents of shared directory: ***
[2024-05-20 11:53:02] total 831328
[2024-05-20 11:53:02] -rw-r--r-- 2 boinc boinc 604568299 May 20 08:57 ATLAS.root_0
[2024-05-20 11:53:02] -rw-r--r-- 2 boinc boinc    480014 May 20 08:57 input.tar.gz
[2024-05-20 11:53:02] -rw-r--r-- 2 boinc boinc     17537 May 20 08:57 start_atlas.sh
[2024-05-20 11:53:02] -rw------- 1 boinc boinc 244749453 May 20 11:51 HITS.pool.root.1
[2024-05-20 11:53:02] -rw------- 1 boinc boinc   1443840 May 20 11:53 result.tar.gz
11:53:03 (3052088): run_atlas exited; CPU time 38689.852330
11:53:03 (3052088): called boinc_finish(0)

</stderr_txt>
]]>

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