Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:14:42 (58232): wrapper (7.7.26015): starting
07:14:42 (58232): wrapper: running run_atlas (--nthreads 8)
[2024-05-17 07:14:42] Arguments: --nthreads 8
[2024-05-17 07:14:42] Threads: 8
[2024-05-17 07:14:42] Checking for CVMFS
[2024-05-17 07:14:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 07:14:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 07:14:43] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 07:14:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 07:14:45] 2.11.2.0 29010 2147 119708 132837 2 338 17993693 18432000 20371 130560 0 15884885 98.569 47132239 54242 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-17 07:14:45] CVMFS is ok
[2024-05-17 07:14:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 07:14:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 07:14:45] Further information can be found at the LHC@home message board.
[2024-05-17 07:14:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 07:14:45] Checking for apptainer binary...
[2024-05-17 07:14:45] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 07:14:45] Running /usr/bin/apptainer --version
[2024-05-17 07:14:45] apptainer version 1.3.0-1.el7
[2024-05-17 07:14:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 07:14:57] c7-16-9.aglt2.org
[2024-05-17 07:14:57] apptainer works
[2024-05-17 07:14:58] Set ATHENA_PROC_NUMBER=8
[2024-05-17 07:14:58] Set ATHENA_CORE_NUMBER=8
[2024-05-17 07:14:58] Starting ATLAS job with PandaID=6207804212
[2024-05-17 07:14:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 11:56:24]  *** The last 200 lines of the pilot log: ***
[2024-05-17 11:56:25] 2024-05-17 15:56:06,673 | INFO     | monitor loop #1180: job 0:6207804212 is in state 'finished'
[2024-05-17 11:56:25] 2024-05-17 15:56:06,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,177 | INFO     | monitor loop #1181: job 0:6207804212 is in state 'finished'
[2024-05-17 11:56:25] 2024-05-17 15:56:09,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,270 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-17 11:56:25] 2024-05-17 15:56:09,270 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6207804212/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,271 | INFO     | extracted standard info from prmon json
[2024-05-17 11:56:25] 2024-05-17 15:56:09,271 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 11:56:25] 2024-05-17 15:56:09,271 | WARNING  | GPU info not found in prmon json
[2024-05-17 11:56:25] 2024-05-17 15:56:09,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 11:56:25] 2024-05-17 15:56:09,271 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 11:56:25] 2024-05-17 15:56:09,281 | INFO     | fitting pss+swap vs Time
[2024-05-17 11:56:25] 2024-05-17 15:56:09,281 | INFO     | model: linear, x: [1715944760.0, 1715944821.0, 1715944882.0, 1715944943.0, 1715945004.0, 1715945065.0, 1715945126.0, 1715945187.0, 1715945248.0, 1715945309.0, 1715
[2024-05-17 11:56:25] 2024-05-17 15:56:09,281 | INFO     | sum of square deviations: 6239921627.555116
[2024-05-17 11:56:25] 2024-05-17 15:56:09,283 | INFO     | sum of deviations: 481676143162.79016
[2024-05-17 11:56:25] 2024-05-17 15:56:09,283 | INFO     | mean x: 1715953025.5404413
[2024-05-17 11:56:25] 2024-05-17 15:56:09,283 | INFO     | mean y: 2291631.2463235296
[2024-05-17 11:56:25] 2024-05-17 15:56:09,284 | INFO     | -- intersect: -132456685343.86794
[2024-05-17 11:56:25] 2024-05-17 15:56:09,284 | INFO     | intersect: -132456685343.86794
[2024-05-17 11:56:25] 2024-05-17 15:56:09,284 | INFO     | chi2: 15.612914995443868
[2024-05-17 11:56:25] 2024-05-17 15:56:09,284 | INFO     | model: linear, x: [1715944760.0, 1715944821.0, 1715944882.0, 1715944943.0, 1715945004.0, 1715945065.0, 1715945126.0, 1715945187.0, 1715945248.0, 1715945309.0, 1715
[2024-05-17 11:56:25] 2024-05-17 15:56:09,285 | INFO     | sum of square deviations: 5902095392.546858
[2024-05-17 11:56:25] 2024-05-17 15:56:09,286 | INFO     | sum of deviations: 471226212009.2023
[2024-05-17 11:56:25] 2024-05-17 15:56:09,286 | INFO     | mean x: 1715952873.0411985
[2024-05-17 11:56:25] 2024-05-17 15:56:09,287 | INFO     | mean y: 2286913.617977528
[2024-05-17 11:56:25] 2024-05-17 15:56:09,287 | INFO     | -- intersect: -137000238218.49202
[2024-05-17 11:56:25] 2024-05-17 15:56:09,287 | INFO     | intersect: -137000238218.49202
[2024-05-17 11:56:25] 2024-05-17 15:56:09,287 | INFO     | chi2: 15.522406758073775
[2024-05-17 11:56:25] 2024-05-17 15:56:09,287 | INFO     | current chi2=15.522406758073775 (change=0.579701083343534 %)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,287 | INFO     | right removable region: 266
[2024-05-17 11:56:25] 2024-05-17 15:56:09,287 | INFO     | model: linear, x: [1715945065.0, 1715945126.0, 1715945187.0, 1715945248.0, 1715945309.0, 1715945370.0, 1715945431.0, 1715945492.0, 1715945553.0, 1715945614.0, 1715
[2024-05-17 11:56:25] 2024-05-17 15:56:09,288 | INFO     | sum of square deviations: 5902088682.546858
[2024-05-17 11:56:25] 2024-05-17 15:56:09,289 | INFO     | sum of deviations: 399554555047.50934
[2024-05-17 11:56:25] 2024-05-17 15:56:09,289 | INFO     | mean x: 1715953178.0411985
[2024-05-17 11:56:25] 2024-05-17 15:56:09,289 | INFO     | mean y: 2328671.4082397004
[2024-05-17 11:56:25] 2024-05-17 15:56:09,289 | INFO     | -- intersect: -116162802930.57146
[2024-05-17 11:56:25] 2024-05-17 15:56:09,289 | INFO     | intersect: -116162802930.57146
[2024-05-17 11:56:25] 2024-05-17 15:56:09,290 | INFO     | chi2: 11.582962641382125
[2024-05-17 11:56:25] 2024-05-17 15:56:09,290 | INFO     | current chi2=11.582962641382125 (change=25.811658842937124 %)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,290 | INFO     | model: linear, x: [1715945370.0, 1715945431.0, 1715945492.0, 1715945553.0, 1715945614.0, 1715945675.0, 1715945736.0, 1715945797.0, 1715945858.0, 1715945919.0, 1715
[2024-05-17 11:56:25] 2024-05-17 15:56:09,290 | INFO     | sum of square deviations: 5576674575.038152
[2024-05-17 11:56:25] 2024-05-17 15:56:09,292 | INFO     | sum of deviations: 339264725552.10724
[2024-05-17 11:56:25] 2024-05-17 15:56:09,292 | INFO     | mean x: 1715953330.5419848
[2024-05-17 11:56:25] 2024-05-17 15:56:09,292 | INFO     | mean y: 2356928.717557252
[2024-05-17 11:56:25] 2024-05-17 15:56:09,292 | INFO     | -- intersect: -104390041787.24446
[2024-05-17 11:56:25] 2024-05-17 15:56:09,292 | INFO     | intersect: -104390041787.24446
[2024-05-17 11:56:25] 2024-05-17 15:56:09,292 | INFO     | chi2: 9.787658043018133
[2024-05-17 11:56:25] 2024-05-17 15:56:09,292 | INFO     | current chi2=9.787658043018133 (change=15.499528522607479 %)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,292 | INFO     | left removable region: 20
[2024-05-17 11:56:25] 2024-05-17 15:56:09,293 | INFO     | model: linear, x: [1715945980.0, 1715946041.0, 1715946102.0, 1715946163.0, 1715946224.0, 1715946285.0, 1715946346.0, 1715946407.0, 1715946468.0, 1715946529.0, 1715
[2024-05-17 11:56:25] 2024-05-17 15:56:09,293 | INFO     | sum of square deviations: 4616103183.008111
[2024-05-17 11:56:25] 2024-05-17 15:56:09,294 | INFO     | sum of deviations: 221379651310.60962
[2024-05-17 11:56:25] 2024-05-17 15:56:09,294 | INFO     | mean x: 1715953452.5447154
[2024-05-17 11:56:25] 2024-05-17 15:56:09,294 | INFO     | mean y: 2409253.8536585364
[2024-05-17 11:56:25] 2024-05-17 15:56:09,294 | INFO     | -- intersect: -82291500117.13156
[2024-05-17 11:56:25] 2024-05-17 15:56:09,294 | INFO     | intersect: -82291500117.13156
[2024-05-17 11:56:25] 2024-05-17 15:56:09,295 | INFO     | chi2: 6.468092272073226
[2024-05-17 11:56:25] 2024-05-17 15:56:09,295 | INFO     | -- intersect: -82291500117.13156
[2024-05-17 11:56:25] 2024-05-17 15:56:09,295 | INFO     | current memory leak: 47.96 B/s (using 246 data points, chi2=6.47)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,295 | INFO     | ..............................
[2024-05-17 11:56:25] 2024-05-17 15:56:09,296 | INFO     | . Timing measurements:
[2024-05-17 11:56:25] 2024-05-17 15:56:09,296 | INFO     | . get job = 0 s
[2024-05-17 11:56:25] 2024-05-17 15:56:09,296 | INFO     | . initial setup = 2 s
[2024-05-17 11:56:25] 2024-05-17 15:56:09,296 | INFO     | . payload setup = 49 s
[2024-05-17 11:56:25] 2024-05-17 15:56:09,296 | INFO     | . stage-in = 0 s
[2024-05-17 11:56:25] 2024-05-17 15:56:09,296 | INFO     | . payload execution = 16645 s
[2024-05-17 11:56:25] 2024-05-17 15:56:09,296 | INFO     | . stage-out = 1 s
[2024-05-17 11:56:25] 2024-05-17 15:56:09,296 | INFO     | . log creation = 0 s
[2024-05-17 11:56:25] 2024-05-17 15:56:09,296 | INFO     | ..............................
[2024-05-17 11:56:25] 2024-05-17 15:56:09,380 | INFO     | 
[2024-05-17 11:56:25] 2024-05-17 15:56:09,380 | INFO     | job summary report
[2024-05-17 11:56:25] 2024-05-17 15:56:09,380 | INFO     | --------------------------------------------------
[2024-05-17 11:56:25] 2024-05-17 15:56:09,380 | INFO     | PanDA job id: 6207804212
[2024-05-17 11:56:25] 2024-05-17 15:56:09,380 | INFO     | task id: 38776125
[2024-05-17 11:56:25] 2024-05-17 15:56:09,380 | INFO     | errors: (none)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,380 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 11:56:25] 2024-05-17 15:56:09,380 | INFO     | pilot state: finished 
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | transexitcode: 0
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | exeerrorcode: 0
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | exeerrordiag: 
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | exitcode: 0
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | exitmsg: OK
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | cpuconsumptiontime: 42984 s
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | nevents: 400
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | neventsw: 0
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | pid: 10652
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | pgrp: 10652
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | corecount: 8
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | event service: False
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | sizes: {0: 2392077, 1: 2392276, 12: 2392276, 22: 2392304, 26: 2392538, 33: 2392566, 16698: 2424239, 16700: 2433199, 16701: 2433255, 16712: 2433425}
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | --------------------------------------------------
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | 
[2024-05-17 11:56:25] 2024-05-17 15:56:09,381 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-05-17 11:56:25] 2024-05-17 15:56:09,477 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,477 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,477 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,477 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 11:56:25] 2024-05-17 15:56:09,478 | INFO     | job 6207804212 has completed (purged errors)
[2024-05-17 11:56:25] 2024-05-17 15:56:09,479 | INFO     | overall cleanup function is called
[2024-05-17 11:56:25] 2024-05-17 15:56:10,486 | INFO     | --- collectZombieJob: --- 10, [10652]
[2024-05-17 11:56:25] 2024-05-17 15:56:10,486 | INFO     | zombie collector waiting for pid 10652
[2024-05-17 11:56:25] 2024-05-17 15:56:10,487 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 11:56:25] 2024-05-17 15:56:11,491 | INFO     | collected zombie processes
[2024-05-17 11:56:25] 2024-05-17 15:56:11,492 | INFO     | will now attempt to kill all subprocesses of pid=10652
[2024-05-17 11:56:25] 2024-05-17 15:56:11,699 | INFO     | process IDs to be killed: [10652] (in reverse order)
[2024-05-17 11:56:25] 2024-05-17 15:56:11,869 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 11:56:25] 2024-05-17 15:56:11,870 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 11:56:25] 2024-05-17 15:56:11,881 | INFO     | did not find any defunct processes belonging to 10652
[2024-05-17 11:56:25] 2024-05-17 15:56:11,891 | INFO     | did not find any defunct processes belonging to 10652
[2024-05-17 11:56:25] 2024-05-17 15:56:11,891 | INFO     | ready for new job
[2024-05-17 11:56:25] 2024-05-17 15:56:11,891 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 11:56:25] 2024-05-17 15:56:11,893 | INFO     | *************************************
[2024-05-17 11:56:25] 2024-05-17 15:56:11,893 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 11:56:25] 2024-05-17 15:56:11,893 | INFO     | *************************************
[2024-05-17 11:56:25] 2024-05-17 15:56:11,893 | INFO     | 
[2024-05-17 11:56:25] 2024-05-17 15:56:11,897 | INFO     | architecture information:
[2024-05-17 11:56:25] 2024-05-17 15:56:11,897 | INFO     | executing command: cat /etc/os-release
[2024-05-17 11:56:25] 2024-05-17 15:56:11,911 | INFO     | cat /etc/os-release:
[2024-05-17 11:56:25] NAME="CentOS Linux"
[2024-05-17 11:56:25] VERSION="7 (Core)"
[2024-05-17 11:56:25] ID="centos"
[2024-05-17 11:56:25] ID_LIKE="rhel fedora"
[2024-05-17 11:56:25] VERSION_ID="7"
[2024-05-17 11:56:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 11:56:25] ANSI_COLOR="0;31"
[2024-05-17 11:56:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 11:56:25] HOME_URL="https://www.centos.org/"
[2024-05-17 11:56:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 11:56:25] 
[2024-05-17 11:56:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 11:56:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 11:56:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 11:56:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 11:56:25] 
[2024-05-17 11:56:25] 2024-05-17 15:56:11,911 | INFO     | *************************************
[2024-05-17 11:56:25] 2024-05-17 15:56:12,414 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-05-17 11:56:25] 2024-05-17 15:56:12,428 | INFO     | sufficient remaining disk space (99625205760 B)
[2024-05-17 11:56:25] 2024-05-17 15:56:12,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 11:56:25] 2024-05-17 15:56:12,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 11:56:25] 2024-05-17 15:56:12,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 11:56:25] 2024-05-17 15:56:12,429 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 11:56:25] 2024-05-17 15:56:12,429 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 11:56:25] 2024-05-17 15:56:12,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 11:56:25] 2024-05-17 15:56:12,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 11:56:25] 2024-05-17 15:56:12,450 | INFO     | all data control threads have been joined
[2024-05-17 11:56:25] 2024-05-17 15:56:12,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 11:56:25] 2024-05-17 15:56:12,698 | INFO     | aborting loop
[2024-05-17 11:56:25] 2024-05-17 15:56:13,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 11:56:25] 2024-05-17 15:56:13,199 | INFO     | all job control threads have been joined
[2024-05-17 11:56:25] 2024-05-17 15:56:13,434 | INFO     | [job] retrieve thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:13,455 | INFO     | [data] control thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:13,509 | INFO     | [payload] validate_post thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:13,521 | INFO     | [data] copytool_in thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:13,657 | INFO     | all payload control threads have been joined
[2024-05-17 11:56:25] 2024-05-17 15:56:13,705 | INFO     | [job] job monitor thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:13,789 | INFO     | [job] validate thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:13,830 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:14,147 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:14,203 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:14,205 | INFO     | [job] control thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:14,318 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:14,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 11:56:25] 2024-05-17 15:56:14,437 | INFO     | [data] copytool_out thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:14,661 | INFO     | [payload] failed_post thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:14,663 | INFO     | [payload] control thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:15,402 | INFO     | [job] queue monitor thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:17,204 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 11:56:25] 2024-05-17 15:56:19,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857438857024)>', '<ExcThread(monitor, started 139856869054208)>']
[2024-05-17 11:56:25] 2024-05-17 15:56:19,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 11:56:25] 2024-05-17 15:56:19,473 | INFO     | [monitor] control thread has ended
[2024-05-17 11:56:25] 2024-05-17 15:56:24,159 | INFO     | all workflow threads have been joined
[2024-05-17 11:56:25] 2024-05-17 15:56:24,159 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 11:56:25] 2024-05-17 15:56:24,160 | INFO     | traces error code: 0
[2024-05-17 11:56:25] 2024-05-17 15:56:24,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 11:56:25] 2024-05-17 15:56:24,251 [wrapper] ==== pilot stdout END ====
[2024-05-17 11:56:25] 2024-05-17 15:56:24,253 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 11:56:25] 2024-05-17 15:56:24,258 [wrapper] pilotpid: 78124
[2024-05-17 11:56:25] 2024-05-17 15:56:24,278 [wrapper] Pilot exit status: 0
[2024-05-17 11:56:25] 2024-05-17 15:56:24,306 [wrapper] pandaids: 6207804212
[2024-05-17 11:56:25] 2024-05-17 15:56:24,403 [wrapper] cleanup: SIGTERM to supervisor_pilot 36281 78125
[2024-05-17 11:56:25] 2024-05-17 15:56:24,432 [wrapper] Test setup, not cleaning
[2024-05-17 11:56:25] 2024-05-17 15:56:24,437 [wrapper] ==== wrapper stdout END ====
[2024-05-17 11:56:25] 2024-05-17 15:56:24,445 [wrapper] ==== wrapper stderr END ====
[2024-05-17 11:56:25] 2024-05-17 15:56:24,468 [wrapper] apfmon messages muted
[2024-05-17 11:56:25]  *** Error codes and diagnostics ***
[2024-05-17 11:56:25]     "exeErrorCode": 0,
[2024-05-17 11:56:25]     "exeErrorDiag": "",
[2024-05-17 11:56:25]     "pilotErrorCode": 0,
[2024-05-17 11:56:25]     "pilotErrorDiag": "",
[2024-05-17 11:56:25]  *** Listing of results directory ***
[2024-05-17 11:56:25] total 825336
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas    467845 May 17 01:47 pilot3.tar.gz
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas      5633 May 17 02:25 queuedata.json
[2024-05-17 11:56:25] -rwx------ 1 boincer umatlas     32251 May 17 02:26 runpilot2-wrapper.sh
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas       100 May 17 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 11:56:25] -rwxr-xr-x 1 boincer umatlas      7986 May 17 07:14 run_atlas
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas       105 May 17 07:14 job.xml
[2024-05-17 11:56:25] -rw-r--r-- 2 boincer umatlas 598171904 May 17 07:14 EVNT.38776119._000394.pool.root.1
[2024-05-17 11:56:25] -rw-r--r-- 2 boincer umatlas     17537 May 17 07:14 start_atlas.sh
[2024-05-17 11:56:25] drwxrwx--x 2 boincer umatlas      4096 May 17 07:14 shared
[2024-05-17 11:56:25] -rw-r--r-- 2 boincer umatlas    480026 May 17 07:14 input.tar.gz
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas         0 May 17 07:14 boinc_lockfile
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas      2635 May 17 07:14 pandaJob.out
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas       467 May 17 07:15 setup.sh.local
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas   1019392 May 17 07:16 agis_schedconf.cvmfs.json
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas   1324701 May 17 07:16 cric_ddmendpoints.json
[2024-05-17 11:56:25] drwx------ 4 boincer umatlas      4096 May 17 07:16 pilot3
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas      6388 May 17 11:45 init_data.xml
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas 239400852 May 17 11:55 HITS.38776125._014480.pool.root.1
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas       531 May 17 11:55 boinc_task_state.xml
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas      1089 May 17 11:55 memory_monitor_summary.json
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas         0 May 17 11:55 agis_ddmendpoints.agis.ALL.json
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas        95 May 17 11:55 pilot_heartbeat.json
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas    422446 May 17 11:55 log.38776125._014480.job.log.tgz.1
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas      7760 May 17 11:56 heartbeat.json
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas        28 May 17 11:56 wrapper_checkpoint.txt
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas      8192 May 17 11:56 boinc_mmap_file
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas      4334 May 17 11:56 pilotlog.txt
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas   1592136 May 17 11:56 log.38776125._014480.job.log.1
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas       357 May 17 11:56 output.list
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas       620 May 17 11:56 runtime_log
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas   2037760 May 17 11:56 result.tar.gz
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas       649 May 17 11:56 VBGLDmUE6R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmldQKDm0qXXYo.diag
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas     11400 May 17 11:56 runtime_log.err
[2024-05-17 11:56:25] -rw-r--r-- 1 boincer umatlas     21747 May 17 11:56 stderr.txt
[2024-05-17 11:56:25] HITS file was successfully produced:
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas 239400852 May 17 11:55 shared/HITS.pool.root.1
[2024-05-17 11:56:25]  *** Contents of shared directory: ***
[2024-05-17 11:56:25] total 820440
[2024-05-17 11:56:25] -rw-r--r-- 2 boincer umatlas 598171904 May 17 07:14 ATLAS.root_0
[2024-05-17 11:56:25] -rw-r--r-- 2 boincer umatlas     17537 May 17 07:14 start_atlas.sh
[2024-05-17 11:56:25] -rw-r--r-- 2 boincer umatlas    480026 May 17 07:14 input.tar.gz
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas 239400852 May 17 11:55 HITS.pool.root.1
[2024-05-17 11:56:25] -rw------- 1 boincer umatlas   2037760 May 17 11:56 result.tar.gz
11:56:26 (58232): run_atlas exited; CPU time 41723.815520
11:56:26 (58232): called boinc_finish(0)

</stderr_txt>
]]>

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