Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-19 13:50:03 (14768): Detected: vboxwrapper 26206
2024-05-19 13:50:03 (14768): Detected: BOINC client v7.16.11
2024-05-19 13:50:03 (14768): Detected: VirtualBox VboxManage Interface (Version: 5.2.22)
2024-05-19 13:50:04 (14768): Successfully copied 'init_data.xml' to the shared directory.
2024-05-19 13:50:04 (14768): Create VM. (boinc_c3bb9f6774b3c502, slot#5)
2024-05-19 13:50:05 (14768): Setting Memory Size for VM. (3900MB)
2024-05-19 13:50:05 (14768): Setting CPU Count for VM. (1)
2024-05-19 13:50:05 (14768): Setting Chipset Options for VM.
2024-05-19 13:50:05 (14768): Setting Graphics Controller Options for VM.
2024-05-19 13:50:06 (14768): Setting Boot Options for VM.
2024-05-19 13:50:06 (14768): Setting Network Configuration for NAT.
2024-05-19 13:50:06 (14768): Enabling VM Network Access.
2024-05-19 13:50:06 (14768): Disabling USB Support for VM.
2024-05-19 13:50:07 (14768): Disabling COM Port Support for VM.
2024-05-19 13:50:07 (14768): Disabling LPT Port Support for VM.
2024-05-19 13:50:07 (14768): Disabling Audio Support for VM.
2024-05-19 13:50:07 (14768): Disabling Clipboard Support for VM.
2024-05-19 13:50:08 (14768): Disabling Drag and Drop Support for VM.
2024-05-19 13:50:08 (14768): Adding storage controller(s) to VM.
2024-05-19 13:50:08 (14768): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-19 13:50:09 (14768): Adding VirtualBox Guest Additions to VM.
2024-05-19 13:50:09 (14768): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-19 13:50:09 (14768): forwarding host port 11375 to guest port 80
2024-05-19 13:50:09 (14768): Enabling remote desktop for VM.
2024-05-19 13:50:10 (14768): Enabling shared directory for VM.
2024-05-19 13:50:10 (14768): Starting VM using VBoxManage interface. (boinc_c3bb9f6774b3c502, slot#5)
2024-05-19 13:50:14 (14768): Successfully started VM. (PID = '3460')
2024-05-19 13:50:14 (14768): Reporting VM Process ID to BOINC.
2024-05-19 13:50:14 (14768): Guest Log: BIOS: VirtualBox 5.2.22
2024-05-19 13:50:14 (14768): Guest Log: CPUID EDX: 0x078bfbff
2024-05-19 13:50:14 (14768): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-19 13:50:14 (14768): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-19 13:50:14 (14768): Detected: Web Application Enabled (http://localhost:11375)
2024-05-19 13:50:14 (14768): Detected: Remote Desktop Enabled (localhost:11376)
2024-05-19 13:50:14 (14768): Preference change detected
2024-05-19 13:50:14 (14768): Setting CPU throttle for VM. (100%)
2024-05-19 13:50:15 (14768): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-19 13:50:16 (14768): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-19 13:50:16 (14768): Guest Log: BIOS: Booting from Hard Disk...
2024-05-19 13:50:19 (14768): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-19 13:50:19 (14768): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-19 13:50:19 (14768): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-19 13:50:23 (14768): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-19 13:50:23 (14768): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-19 13:50:30 (14768): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.000132 main     Log opened 2024-05-19T13:50:29.395146000Z
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.000244 main     OS Product: Linux
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.000280 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.000330 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.000377 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.000378 main     Process ID: 1237
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.000378 main     Package type: LINUX_64BITS_GENERIC
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.001676 main     5.2.32 r132073 started. Verbose level = 0
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.009620 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.009816 main     Session 0 is about to close ...
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.009858 main     Stopping all guest processes ...
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.009890 main     Closing all guest files ...
2024-05-19 13:50:30 (14768): Guest Log: 00:00:00.011063 main     Ended.
2024-05-19 13:50:31 (14768): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-19 13:50:31 (14768): Guest Log: [INFO] Mounting shared directory
2024-05-19 13:50:31 (14768): Guest Log: [INFO] Checking for init_data.xml
2024-05-19 13:50:36 (14768): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-19 13:50:36 (14768): Guest Log: [INFO] Detected branch: prod
2024-05-19 13:50:36 (14768): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-19 13:50:36 (14768): Guest Log: Copying input files
2024-05-19 13:50:41 (14768): Guest Log: Copied input files into RunAtlas.
2024-05-19 13:50:41 (14768): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-19 13:50:41 (14768): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-19 13:50:41 (14768): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-19 13:50:41 (14768): Guest Log: Further information can be found at the LHC@home message board.
2024-05-19 13:50:49 (14768): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-19 13:50:49 (14768): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-19 13:50:49 (14768): Guest Log: 2.6.3.0 1504 0 32104 132910 3 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-05-19 13:50:50 (14768): Guest Log: copied the webapp to /var/www
2024-05-19 13:50:50 (14768): Guest Log: core_number=1
2024-05-19 13:50:50 (14768): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-19 13:50:50 (14768): Guest Log:  *** Starting ATLAS job. (PandaID=6207783830 taskID=38776104) ***
2024-05-19 15:30:17 (14768): Status Report: Elapsed Time: '6000.000000'
2024-05-19 15:30:17 (14768): Status Report: CPU Time: '5353.531250'
2024-05-19 17:10:20 (14768): Status Report: Elapsed Time: '12000.000000'
2024-05-19 17:10:20 (14768): Status Report: CPU Time: '11304.687500'
2024-05-19 18:50:23 (14768): Status Report: Elapsed Time: '18000.000000'
2024-05-19 18:50:23 (14768): Status Report: CPU Time: '17253.390625'
2024-05-19 20:30:26 (14768): Status Report: Elapsed Time: '24000.000000'
2024-05-19 20:30:26 (14768): Status Report: CPU Time: '23205.640625'
2024-05-19 22:10:31 (14768): Status Report: Elapsed Time: '30000.000000'
2024-05-19 22:10:31 (14768): Status Report: CPU Time: '29154.062500'
2024-05-19 23:50:35 (14768): Status Report: Elapsed Time: '36000.000000'
2024-05-19 23:50:35 (14768): Status Report: CPU Time: '35108.437500'
2024-05-20 01:30:38 (14768): Status Report: Elapsed Time: '42000.000000'
2024-05-20 01:30:38 (14768): Status Report: CPU Time: '41060.968750'
2024-05-20 02:28:22 (14768): Guest Log:  *** Job finished ***
2024-05-20 02:28:22 (14768): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:10,632 | INFO     | [data] copytool_out thread has finished
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:11,626 | INFO     | [job] queue monitor thread has finished
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:14,128 | INFO     | [data] queue_monitor thread has finished
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:15,391 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998220994368)>', '<ExcThread(monitor, started 139997789275904)>']
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:16,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:16,235 | INFO     | [monitor] control thread has ended
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,397 | INFO     | all workflow threads have been joined
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,397 | INFO     | end of generic workflow (traces error code: 0)
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,398 | INFO     | traces error code: 0
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,459 [wrapper] ==== pilot stdout END ====
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,462 [wrapper] ==== wrapper stdout RESUME ====
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,465 [wrapper] pilotpid: 6328
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,467 [wrapper] Pilot exit status: 0
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,567 [wrapper] pandaids: 6207783830
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,594 [wrapper] cleanup: SIGTERM to supervisor_pilot  8383 6329
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,599 [wrapper] Test setup, not cleaning
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,605 [wrapper] ==== wrapper stdout END ====
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,612 [wrapper] ==== wrapper stderr END ====
2024-05-20 02:28:22 (14768): Guest Log: 2024-05-20 02:28:20,618 [wrapper] apfmon messages muted
2024-05-20 02:28:22 (14768): Guest Log:  *** Error codes and diagnostics ***
2024-05-20 02:28:22 (14768): Guest Log:     "exeErrorCode": 0,
2024-05-20 02:28:22 (14768): Guest Log:     "exeErrorDiag": "",
2024-05-20 02:28:22 (14768): Guest Log:     "pilotErrorCode": 0,
2024-05-20 02:28:22 (14768): Guest Log:     "pilotErrorDiag": "",
2024-05-20 02:28:22 (14768): Guest Log:  *** Listing of results directory ***
2024-05-20 02:28:22 (14768): Guest Log: total 233568
2024-05-20 02:28:22 (14768): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 17 05:47 pilot3.tar.gz
2024-05-20 02:28:22 (14768): Guest Log: -rwx------. 1 atlas atlas     32251 May 17 05:57 runpilot2-wrapper.sh
2024-05-20 02:28:22 (14768): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 17 05:57 queuedata.json
2024-05-20 02:28:22 (14768): Guest Log: -rwxr-xr-x. 1 atlas atlas      9019 May 19 13:50 init_data.xml
2024-05-20 02:28:22 (14768): Guest Log: -rwxr-xr-x. 1 atlas atlas    480006 May 19 13:50 input.tar.gz
2024-05-20 02:28:22 (14768): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 May 19 13:50 start_atlas.sh
2024-05-20 02:28:22 (14768): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 19 13:50 EVNT.38776100._000443.pool.root.1 -> /data/./ATLAS.root_0
2024-05-20 02:28:22 (14768): Guest Log: -rw-r--r--. 1 atlas atlas      2644 May 19 13:50 pandaJob.out
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas       424 May 19 13:50 setup.sh.local
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas   1014061 May 19 13:51 agis_schedconf.cvmfs.json
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas   1324701 May 19 13:51 cric_ddmendpoints.json
2024-05-20 02:28:22 (14768): Guest Log: drwx------. 4 atlas atlas      4096 May 19 13:51 pilot3
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas 222761495 May 20 02:27 HITS.38776104._012278.pool.root.1
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas        95 May 20 02:27 pilot_heartbeat.json
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas      1025 May 20 02:27 memory_monitor_summary.json
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas         0 May 20 02:27 agis_ddmendpoints.agis.ALL.json
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas    643465 May 20 02:27 log.38776104._012278.job.log.tgz.1
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas      7723 May 20 02:28 heartbeat.json
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas      4394 May 20 02:28 pilotlog.txt
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas   5830634 May 20 02:28 log.38776104._012278.job.log.1
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas       357 May 20 02:28 output.list
2024-05-20 02:28:22 (14768): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 20 02:28 runtime_log
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas   6492160 May 20 02:28 result.tar.gz
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas       642 May 20 02:28 t2lKDmpl5R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmDcQKDmyESfom.diag
2024-05-20 02:28:22 (14768): Guest Log: -rw-r--r--. 1 atlas atlas     10792 May 20 02:28 runtime_log.err
2024-05-20 02:28:22 (14768): Guest Log: Looking for outputfile HITS.38776104._012278.pool.root.1
2024-05-20 02:28:22 (14768): Guest Log: HITS file was successfully produced
2024-05-20 02:28:22 (14768): Guest Log: -rw-------. 1 atlas atlas 222761495 May 20 02:27 /home/atlas/RunAtlas/HITS.38776104._012278.pool.root.1
2024-05-20 02:28:24 (14768): Guest Log: Successfully finished the ATLAS job!
2024-05-20 02:28:24 (14768): Guest Log: Copying the results back to the shared directory!
2024-05-20 02:28:24 (14768): Guest Log:  *** Contents of shared directory: ***
2024-05-20 02:28:24 (14768): Guest Log: total 810176
2024-05-20 02:28:24 (14768): Guest Log: -rwxrwxrwx. 1 root root 599845196 May 19 10:50 ATLAS.root_0
2024-05-20 02:28:24 (14768): Guest Log: -rwxrwxrwx. 1 root root 222761495 May 19 23:28 HITS.pool.root.1
2024-05-20 02:28:24 (14768): Guest Log: -rwxrwxrwx. 1 root root      9019 May 19 10:50 init_data.xml
2024-05-20 02:28:24 (14768): Guest Log: -rwxrwxrwx. 1 root root    480006 May 17 12:10 input.tar.gz
2024-05-20 02:28:24 (14768): Guest Log: -rwxrwxrwx. 1 root root   6492160 May 19 23:28 result.tar.gz
2024-05-20 02:28:24 (14768): Guest Log: -rwxrwxrwx. 1 root root     17537 May 17 12:10 start_atlas.sh
2024-05-20 02:28:24 (14768): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-20 02:28:24 (14768): VM Completion File Detected.
2024-05-20 02:28:24 (14768): Powering off VM.
2024-05-20 02:28:24 (14768): Successfully stopped VM.
2024-05-20 02:28:24 (14768): Deregistering VM. (boinc_c3bb9f6774b3c502, slot#5)
2024-05-20 02:28:24 (14768): Removing network bandwidth throttle group from VM.
2024-05-20 02:28:25 (14768): Removing VM from VirtualBox.
02:28:30 (14768): called boinc_finish(0)

</stderr_txt>
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