Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:10:29 (114419): wrapper (7.7.26015): starting
05:10:29 (114419): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 05:10:29] Arguments: --nthreads 4
[2024-05-23 05:10:29] Threads: 4
[2024-05-23 05:10:29] Checking for CVMFS
[2024-05-23 05:10:29] No cvmfs_config command found, will try listing directly
[2024-05-23 05:10:29] CVMFS is ok
[2024-05-23 05:10:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 05:10:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 05:10:29] Further information can be found at the LHC@home message board.
[2024-05-23 05:10:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 05:10:29] Checking for apptainer binary...
[2024-05-23 05:10:29] which: no apptainer in ((null))
[2024-05-23 05:10:29] apptainer is not installed, using version from CVMFS
[2024-05-23 05:10:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 05:10:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-23 05:10:30] apptainer works
[2024-05-23 05:10:30] Set ATHENA_PROC_NUMBER=4
[2024-05-23 05:10:30] Set ATHENA_CORE_NUMBER=4
[2024-05-23 05:10:30] Starting ATLAS job with PandaID=6207783718
[2024-05-23 05:10:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-23 07:40:43]  *** The last 200 lines of the pilot log: ***
[2024-05-23 07:40:43] 2024-05-23 05:40:21,216 | INFO     | model: linear, x: [1716435085.0, 1716435146.0, 1716435207.0, 1716435268.0, 1716435329.0, 1716435390.0, 1716435451.0, 1716435512.0, 1716435573.0, 1716435634.0, 1716
[2024-05-23 07:40:43] 2024-05-23 05:40:21,216 | INFO     | sum of square deviations: 635130048.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,216 | INFO     | sum of deviations: -406260732.0000002
[2024-05-23 07:40:43] 2024-05-23 05:40:21,216 | INFO     | mean x: 1716438928.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,216 | INFO     | mean y: 2359830.755905512
[2024-05-23 07:40:43] 2024-05-23 05:40:21,216 | INFO     | -- intersect: 1100279441.8944666
[2024-05-23 07:40:43] 2024-05-23 05:40:21,216 | INFO     | intersect: 1100279441.8944666
[2024-05-23 07:40:43] 2024-05-23 05:40:21,216 | INFO     | chi2: 0.0007901347262059048
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | current chi2=0.0007901347262059048 (change=52.399497414069444 %)
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | model: linear, x: [1716435390.0, 1716435451.0, 1716435512.0, 1716435573.0, 1716435634.0, 1716435695.0, 1716435756.0, 1716435817.0, 1716435878.0, 1716435939.0, 1716
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | sum of square deviations: 563026370.5
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | sum of deviations: -627827524.5
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | mean x: 1716439080.5
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | mean y: 2360298.0409836066
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | -- intersect: 1916351818.3819854
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | intersect: 1916351818.3819854
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | chi2: 0.0005862348087300836
[2024-05-23 07:40:43] 2024-05-23 05:40:21,217 | INFO     | current chi2=0.0005862348087300836 (change=25.805715242375772 %)
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | model: linear, x: [1716435695.0, 1716435756.0, 1716435817.0, 1716435878.0, 1716435939.0, 1716436000.0, 1716436061.0, 1716436122.0, 1716436183.0, 1716436244.0, 1716
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | sum of square deviations: 496597218.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | sum of deviations: -829606100.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | mean x: 1716439233.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | mean y: 2360762.0683760685
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | -- intersect: 2869812302.999323
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | intersect: 2869812302.999323
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | chi2: 0.00035267448303553825
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | current chi2=0.00035267448303553825 (change=39.84074678207688 %)
[2024-05-23 07:40:43] 2024-05-23 05:40:21,218 | INFO     | model: linear, x: [1716436000.0, 1716436061.0, 1716436122.0, 1716436183.0, 1716436244.0, 1716436305.0, 1716436366.0, 1716436427.0, 1716436488.0, 1716436549.0, 1716
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | sum of square deviations: 435610028.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | sum of deviations: -824978213.0000001
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | mean x: 1716439385.5
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | mean y: 2360741.0535714286
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | -- intersect: 3253032226.9097424
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | intersect: 3253032226.9097424
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | chi2: 0.00023309563927569426
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | current chi2=0.00023309563927569426 (change=33.90629305829146 %)
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | model: linear, x: [1716436305.0, 1716436366.0, 1716436427.0, 1716436488.0, 1716436549.0, 1716436610.0, 1716436671.0, 1716436732.0, 1716436793.0, 1716436854.0, 1716
[2024-05-23 07:40:43] 2024-05-23 05:40:21,219 | INFO     | sum of square deviations: 379832238.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | sum of deviations: -657995959.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | mean x: 1716439538.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | mean y: 2360281.859813084
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | -- intersect: 2975805310.6933765
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | intersect: 2975805310.6933765
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | chi2: 0.0002135848356912731
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | current chi2=0.0002135848356912731 (change=8.37029969545879 %)
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | left removable region: 80
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | model: linear, x: [1716438745.0, 1716438806.0, 1716438867.0, 1716438928.0, 1716438989.0, 1716439050.0, 1716439111.0, 1716439172.0, 1716439233.0, 1716439294.0, 1716
[2024-05-23 07:40:43] 2024-05-23 05:40:21,220 | INFO     | sum of square deviations: 70364110.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | sum of deviations: 13175634.000000011
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | mean x: 1716440575.0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | mean y: 2357815.6393442624
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | -- intersect: -319044569.73793924
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | intersect: -319044569.73793924
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | chi2: 5.188576850804215e-07
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | -- intersect: -319044569.73793924
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | current memory leak: 0.19 B/s (using 61 data points, chi2=0.00)
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | ..............................
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | . Timing measurements:
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | . get job = 0 s
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | . initial setup = 1 s
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | . payload setup = 5 s
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | . stage-in = 0 s
[2024-05-23 07:40:43] 2024-05-23 05:40:21,221 | INFO     | . payload execution = 8944 s
[2024-05-23 07:40:43] 2024-05-23 05:40:21,222 | INFO     | . stage-out = 0 s
[2024-05-23 07:40:43] 2024-05-23 05:40:21,222 | INFO     | . log creation = 0 s
[2024-05-23 07:40:43] 2024-05-23 05:40:21,222 | INFO     | ..............................
[2024-05-23 07:40:43] 2024-05-23 05:40:21,287 | INFO     | 
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | job summary report
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | --------------------------------------------------
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | PanDA job id: 6207783718
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | task id: 38776125
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | errors: (none)
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | pilot state: finished 
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | transexitcode: 0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | exeerrorcode: 0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | exeerrordiag: 
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | exitcode: 0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | exitmsg: OK
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | cpuconsumptiontime: 32782 s
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | nevents: 400
[2024-05-23 07:40:43] 2024-05-23 05:40:21,288 | INFO     | neventsw: 0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,289 | INFO     | pid: 128979
[2024-05-23 07:40:43] 2024-05-23 05:40:21,289 | INFO     | pgrp: 128979
[2024-05-23 07:40:43] 2024-05-23 05:40:21,289 | INFO     | corecount: 4
[2024-05-23 07:40:43] 2024-05-23 05:40:21,289 | INFO     | event service: False
[2024-05-23 07:40:43] 2024-05-23 05:40:21,289 | INFO     | sizes: {0: 2383814, 4: 2384020, 11: 2384048, 8953: 2412245, 8954: 2412244, 8956: 2421282, 8959: 2421466, 8966: 2421636}
[2024-05-23 07:40:43] 2024-05-23 05:40:21,289 | INFO     | --------------------------------------------------
[2024-05-23 07:40:43] 2024-05-23 05:40:21,289 | INFO     | 
[2024-05-23 07:40:43] 2024-05-23 05:40:21,289 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2024-05-23 07:40:43] 2024-05-23 05:40:21,315 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,315 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,315 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,315 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,317 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-23 07:40:43] 2024-05-23 05:40:21,317 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,317 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-23 07:40:43] 2024-05-23 05:40:21,317 | INFO     | job 6207783718 has completed (purged errors)
[2024-05-23 07:40:43] 2024-05-23 05:40:21,317 | INFO     | overall cleanup function is called
[2024-05-23 07:40:43] 2024-05-23 05:40:22,325 | INFO     | --- collectZombieJob: --- 10, [128979]
[2024-05-23 07:40:43] 2024-05-23 05:40:22,325 | INFO     | zombie collector waiting for pid 128979
[2024-05-23 07:40:43] 2024-05-23 05:40:22,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-23 07:40:43] 2024-05-23 05:40:23,330 | INFO     | collected zombie processes
[2024-05-23 07:40:43] 2024-05-23 05:40:23,330 | INFO     | will now attempt to kill all subprocesses of pid=128979
[2024-05-23 07:40:43] 2024-05-23 05:40:23,559 | INFO     | process IDs to be killed: [128979] (in reverse order)
[2024-05-23 07:40:43] 2024-05-23 05:40:23,765 | WARNING  | found no corresponding commands to process id(s)
[2024-05-23 07:40:43] 2024-05-23 05:40:23,766 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-23 07:40:43] 2024-05-23 05:40:23,781 | INFO     | did not find any defunct processes belonging to 128979
[2024-05-23 07:40:43] 2024-05-23 05:40:23,791 | INFO     | did not find any defunct processes belonging to 128979
[2024-05-23 07:40:43] 2024-05-23 05:40:23,791 | INFO     | ready for new job
[2024-05-23 07:40:43] 2024-05-23 05:40:23,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-23 07:40:43] 2024-05-23 05:40:23,793 | INFO     | *************************************
[2024-05-23 07:40:43] 2024-05-23 05:40:23,793 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-23 07:40:43] 2024-05-23 05:40:23,793 | INFO     | *************************************
[2024-05-23 07:40:43] 2024-05-23 05:40:23,793 | INFO     | 
[2024-05-23 07:40:43] 2024-05-23 05:40:23,798 | INFO     | architecture information:
[2024-05-23 07:40:43] 2024-05-23 05:40:23,798 | INFO     | executing command: cat /etc/os-release
[2024-05-23 07:40:43] 2024-05-23 05:40:23,812 | INFO     | cat /etc/os-release:
[2024-05-23 07:40:43] NAME="CentOS Linux"
[2024-05-23 07:40:43] VERSION="7 (Core)"
[2024-05-23 07:40:43] ID="centos"
[2024-05-23 07:40:43] ID_LIKE="rhel fedora"
[2024-05-23 07:40:43] VERSION_ID="7"
[2024-05-23 07:40:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-23 07:40:43] ANSI_COLOR="0;31"
[2024-05-23 07:40:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-23 07:40:43] HOME_URL="https://www.centos.org/"
[2024-05-23 07:40:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-23 07:40:43] 
[2024-05-23 07:40:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-23 07:40:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-23 07:40:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-23 07:40:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-23 07:40:43] 
[2024-05-23 07:40:43] 2024-05-23 05:40:23,813 | INFO     | *************************************
[2024-05-23 07:40:43] 2024-05-23 05:40:24,315 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2024-05-23 07:40:43] 2024-05-23 05:40:24,339 | INFO     | sufficient remaining disk space (3032786927616 B)
[2024-05-23 07:40:43] 2024-05-23 05:40:24,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-23 07:40:43] 2024-05-23 05:40:24,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-23 07:40:43] 2024-05-23 05:40:24,340 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-23 07:40:43] 2024-05-23 05:40:24,341 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-23 07:40:43] 2024-05-23 05:40:24,341 | INFO     | found 0 job(s) in 20 queues
[2024-05-23 07:40:43] 2024-05-23 05:40:24,341 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-23 07:40:43] 2024-05-23 05:40:24,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-23 07:40:43] 2024-05-23 05:40:24,413 | INFO     | all payload control threads have been joined
[2024-05-23 07:40:43] 2024-05-23 05:40:24,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-23 07:40:43] 2024-05-23 05:40:24,794 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-23 07:40:43] 2024-05-23 05:40:24,795 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-23 07:40:43] 2024-05-23 05:40:24,795 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-23 07:40:43] 2024-05-23 05:40:24,795 | INFO     | will abort loop
[2024-05-23 07:40:43] 2024-05-23 05:40:24,869 | INFO     | all data control threads have been joined
[2024-05-23 07:40:43] 2024-05-23 05:40:25,146 | INFO     | all job control threads have been joined
[2024-05-23 07:40:43] 2024-05-23 05:40:25,345 | INFO     | [job] retrieve thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:25,410 | INFO     | [job] create_data_payload thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:25,418 | INFO     | [payload] control thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:25,620 | INFO     | [payload] failed_post thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:25,652 | INFO     | [payload] validate_pre thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:25,800 | INFO     | [job] job monitor thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:25,874 | INFO     | [data] control thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:26,071 | INFO     | [payload] execute_payloads thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:26,151 | INFO     | [job] control thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:26,232 | INFO     | [payload] validate_post thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:26,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-23 07:40:43] 2024-05-23 05:40:26,346 | INFO     | [data] copytool_out thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:26,578 | INFO     | [job] validate thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:26,698 | INFO     | [data] copytool_in thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:27,297 | INFO     | [job] queue monitor thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:28,777 | INFO     | [data] queue_monitor thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:35,229 | INFO     | job.realtimelogging is not enabled
[2024-05-23 07:40:43] 2024-05-23 05:40:36,234 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-23 07:40:43] 2024-05-23 05:40:37,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47343519212608)>', '<ExcThread(monitor, started 47343692564224)>']
[2024-05-23 07:40:43] 2024-05-23 05:40:38,399 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-23 07:40:43] 2024-05-23 05:40:38,399 | INFO     | [monitor] control thread has ended
[2024-05-23 07:40:43] 2024-05-23 05:40:42,922 | INFO     | all workflow threads have been joined
[2024-05-23 07:40:43] 2024-05-23 05:40:42,922 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-23 07:40:43] 2024-05-23 05:40:42,922 | INFO     | traces error code: 0
[2024-05-23 07:40:43] 2024-05-23 05:40:42,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-23 07:40:43] 2024-05-23 05:40:42,988 [wrapper] ==== pilot stdout END ====
[2024-05-23 07:40:43] 2024-05-23 05:40:42,990 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-23 07:40:43] 2024-05-23 05:40:42,991 [wrapper] pilotpid: 120592
[2024-05-23 07:40:43] 2024-05-23 05:40:42,993 [wrapper] Pilot exit status: 0
[2024-05-23 07:40:43] 2024-05-23 05:40:43,002 [wrapper] pandaids: 6207783718
[2024-05-23 07:40:43] 2024-05-23 05:40:43,109 [wrapper] cleanup: SIGTERM to supervisor_pilot 1155770 120593
[2024-05-23 07:40:43] 2024-05-23 05:40:43,112 [wrapper] Test setup, not cleaning
[2024-05-23 07:40:43] 2024-05-23 05:40:43,114 [wrapper] ==== wrapper stdout END ====
[2024-05-23 07:40:43] 2024-05-23 05:40:43,117 [wrapper] ==== wrapper stderr END ====
[2024-05-23 07:40:43] 2024-05-23 05:40:43,122 [wrapper] apfmon messages muted
[2024-05-23 07:40:43]  *** Error codes and diagnostics ***
[2024-05-23 07:40:43]     "exeErrorCode": 0,
[2024-05-23 07:40:43]     "exeErrorDiag": "",
[2024-05-23 07:40:43]     "pilotErrorCode": 0,
[2024-05-23 07:40:43]     "pilotErrorDiag": "",
[2024-05-23 07:40:43]  *** Listing of results directory ***
[2024-05-23 07:40:43] total 830936
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc    467845 May 17 07:47 pilot3.tar.gz
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc      5633 May 17 07:53 queuedata.json
[2024-05-23 07:40:43] -rwx------ 1 boinc boinc     32251 May 17 07:54 runpilot2-wrapper.sh
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc       100 May 23 04:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-23 07:40:43] -rwxr-xr-x 1 boinc boinc      7986 May 23 04:48 run_atlas
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc       105 May 23 04:48 job.xml
[2024-05-23 07:40:43] -rw-r--r-- 2 boinc boinc 599268581 May 23 05:10 EVNT.38776119._000371.pool.root.1
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc      6644 May 23 05:10 init_data.xml
[2024-05-23 07:40:43] -rw-r--r-- 2 boinc boinc     17537 May 23 05:10 start_atlas.sh
[2024-05-23 07:40:43] drwxrwx--x 2 boinc boinc      4096 May 23 05:10 shared
[2024-05-23 07:40:43] -rw-r--r-- 2 boinc boinc    480021 May 23 05:10 input.tar.gz
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc         0 May 23 05:10 boinc_lockfile
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc      2634 May 23 05:10 pandaJob.out
[2024-05-23 07:40:43] -rw------- 1 boinc boinc       424 May 23 05:10 setup.sh.local
[2024-05-23 07:40:43] -rw------- 1 boinc boinc   1011752 May 23 05:10 agis_schedconf.cvmfs.json
[2024-05-23 07:40:43] -rw------- 1 boinc boinc         0 May 23 05:10 agis_ddmendpoints.agis.ALL.json
[2024-05-23 07:40:43] -rw------- 1 boinc boinc   1319723 May 23 05:10 cric_ddmendpoints.json
[2024-05-23 07:40:43] drwx------ 4 boinc boinc      4096 May 23 05:10 pilot3
[2024-05-23 07:40:43] -rw------- 1 boinc boinc 245625992 May 23 07:39 HITS.38776125._014423.pool.root.1
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc       530 May 23 07:39 boinc_task_state.xml
[2024-05-23 07:40:43] -rw------- 1 boinc boinc        95 May 23 07:40 pilot_heartbeat.json
[2024-05-23 07:40:43] -rw------- 1 boinc boinc      1043 May 23 07:40 memory_monitor_summary.json
[2024-05-23 07:40:43] -rw------- 1 boinc boinc    292255 May 23 07:40 log.38776125._014423.job.log.tgz.1
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc      8192 May 23 07:40 boinc_mmap_file
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc        27 May 23 07:40 wrapper_checkpoint.txt
[2024-05-23 07:40:43] -rw------- 1 boinc boinc      7717 May 23 07:40 heartbeat.json
[2024-05-23 07:40:43] -rw------- 1 boinc boinc      4603 May 23 07:40 pilotlog.txt
[2024-05-23 07:40:43] -rw------- 1 boinc boinc    935018 May 23 07:40 log.38776125._014423.job.log.1
[2024-05-23 07:40:43] -rw------- 1 boinc boinc       357 May 23 07:40 output.list
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc       620 May 23 07:40 runtime_log
[2024-05-23 07:40:43] -rw------- 1 boinc boinc   1249280 May 23 07:40 result.tar.gz
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc     11409 May 23 07:40 runtime_log.err
[2024-05-23 07:40:43] -rw------- 1 boinc boinc       655 May 23 07:40 Q2BODmDj5R5nsSi4apGgGQJmABFKDmABFKDm4ySLDm5bQKDmopea2m.diag
[2024-05-23 07:40:43] -rw-r--r-- 1 boinc boinc     21427 May 23 07:40 stderr.txt
[2024-05-23 07:40:43] HITS file was successfully produced:
[2024-05-23 07:40:43] -rw------- 1 boinc boinc 245625992 May 23 07:39 shared/HITS.pool.root.1
[2024-05-23 07:40:43]  *** Contents of shared directory: ***
[2024-05-23 07:40:43] total 826816
[2024-05-23 07:40:43] -rw-r--r-- 2 boinc boinc 599268581 May 23 05:10 ATLAS.root_0
[2024-05-23 07:40:43] -rw-r--r-- 2 boinc boinc     17537 May 23 05:10 start_atlas.sh
[2024-05-23 07:40:43] -rw-r--r-- 2 boinc boinc    480021 May 23 05:10 input.tar.gz
[2024-05-23 07:40:43] -rw------- 1 boinc boinc 245625992 May 23 07:39 HITS.pool.root.1
[2024-05-23 07:40:43] -rw------- 1 boinc boinc   1249280 May 23 07:40 result.tar.gz
07:40:45 (114419): run_atlas exited; CPU time 32559.432490
07:40:45 (114419): called boinc_finish(0)

</stderr_txt>
]]>

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