Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:42:27 (731796): wrapper (7.7.26015): starting
18:42:27 (731796): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 18:42:27] Arguments: --nthreads 4
[2024-05-23 18:42:27] Threads: 4
[2024-05-23 18:42:27] Checking for CVMFS
[2024-05-23 18:42:27] No cvmfs_config command found, will try listing directly
[2024-05-23 18:42:27] CVMFS is ok
[2024-05-23 18:42:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 18:42:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 18:42:27] Further information can be found at the LHC@home message board.
[2024-05-23 18:42:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 18:42:27] Checking for apptainer binary...
[2024-05-23 18:42:27] which: no apptainer in ((null))
[2024-05-23 18:42:27] apptainer is not installed, using version from CVMFS
[2024-05-23 18:42:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 18:42:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-23 18:42:28] apptainer works
[2024-05-23 18:42:28] Set ATHENA_PROC_NUMBER=4
[2024-05-23 18:42:28] Set ATHENA_CORE_NUMBER=4
[2024-05-23 18:42:28] Starting ATLAS job with PandaID=6207775422
[2024-05-23 18:42:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-23 23:31:02]  *** The last 200 lines of the pilot log: ***
[2024-05-23 23:31:02] 2024-05-23 21:30:46,300 | INFO     | chi2: 4.17468541973642
[2024-05-23 23:31:02] 2024-05-23 21:30:46,300 | INFO     | model: linear, x: [1716482583.0, 1716482644.0, 1716482705.0, 1716482766.0, 1716482827.0, 1716482888.0, 1716482949.0, 1716483010.0, 1716483071.0, 1716483132.0, 1716
[2024-05-23 23:31:02] 2024-05-23 21:30:46,300 | INFO     | sum of square deviations: 6662039329.5
[2024-05-23 23:31:02] 2024-05-23 21:30:46,302 | INFO     | sum of deviations: 136329140340.00002
[2024-05-23 23:31:02] 2024-05-23 21:30:46,302 | INFO     | mean x: 1716491031.5
[2024-05-23 23:31:02] 2024-05-23 21:30:46,302 | INFO     | mean y: 2298473.618705036
[2024-05-23 23:31:02] 2024-05-23 21:30:46,302 | INFO     | -- intersect: -35123244194.60172
[2024-05-23 23:31:02] 2024-05-23 21:30:46,302 | INFO     | intersect: -35123244194.60172
[2024-05-23 23:31:02] 2024-05-23 21:30:46,303 | INFO     | chi2: 4.174847024229967
[2024-05-23 23:31:02] 2024-05-23 21:30:46,303 | INFO     | current chi2=4.174847024229967 (change=-0.0038710579911737947 %)
[2024-05-23 23:31:02] 2024-05-23 21:30:46,303 | INFO     | right removable region: 277
[2024-05-23 23:31:02] 2024-05-23 21:30:46,303 | INFO     | model: linear, x: [1716482888.0, 1716482949.0, 1716483010.0, 1716483071.0, 1716483132.0, 1716483193.0, 1716483254.0, 1716483315.0, 1716483376.0, 1716483437.0, 1716
[2024-05-23 23:31:02] 2024-05-23 21:30:46,303 | INFO     | sum of square deviations: 6662039329.5
[2024-05-23 23:31:02] 2024-05-23 21:30:46,305 | INFO     | sum of deviations: 71692144843.0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,305 | INFO     | mean x: 1716491336.5
[2024-05-23 23:31:02] 2024-05-23 21:30:46,305 | INFO     | mean y: 2327635.9424460432
[2024-05-23 23:31:02] 2024-05-23 21:30:46,305 | INFO     | -- intersect: -18469335383.69759
[2024-05-23 23:31:02] 2024-05-23 21:30:46,305 | INFO     | intersect: -18469335383.69759
[2024-05-23 23:31:02] 2024-05-23 21:30:46,306 | INFO     | chi2: 1.616496627545124
[2024-05-23 23:31:02] 2024-05-23 21:30:46,306 | INFO     | current chi2=1.616496627545124 (change=61.27860030116506 %)
[2024-05-23 23:31:02] 2024-05-23 21:30:46,306 | INFO     | model: linear, x: [1716483193.0, 1716483254.0, 1716483315.0, 1716483376.0, 1716483437.0, 1716483498.0, 1716483559.0, 1716483620.0, 1716483681.0, 1716483742.0, 1716
[2024-05-23 23:31:02] 2024-05-23 21:30:46,306 | INFO     | sum of square deviations: 6309000152.0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,308 | INFO     | sum of deviations: 16693053575.999996
[2024-05-23 23:31:02] 2024-05-23 21:30:46,308 | INFO     | mean x: 1716491489.0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,308 | INFO     | mean y: 2351395.1611721613
[2024-05-23 23:31:02] 2024-05-23 21:30:46,308 | INFO     | -- intersect: -4539332500.589193
[2024-05-23 23:31:02] 2024-05-23 21:30:46,309 | INFO     | intersect: -4539332500.589193
[2024-05-23 23:31:02] 2024-05-23 21:30:46,309 | INFO     | chi2: 0.0527750791123231
[2024-05-23 23:31:02] 2024-05-23 21:30:46,309 | INFO     | current chi2=0.0527750791123231 (change=96.73521873086308 %)
[2024-05-23 23:31:02] 2024-05-23 21:30:46,309 | INFO     | model: linear, x: [1716483498.0, 1716483559.0, 1716483620.0, 1716483681.0, 1716483742.0, 1716483803.0, 1716483864.0, 1716483925.0, 1716483986.0, 1716484047.0, 1716
[2024-05-23 23:31:02] 2024-05-23 21:30:46,309 | INFO     | sum of square deviations: 5968658887.0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,311 | INFO     | sum of deviations: 8216740656.5
[2024-05-23 23:31:02] 2024-05-23 21:30:46,311 | INFO     | mean x: 1716491641.5
[2024-05-23 23:31:02] 2024-05-23 21:30:46,311 | INFO     | mean y: 2355170.0858208956
[2024-05-23 23:31:02] 2024-05-23 21:30:46,311 | INFO     | -- intersect: -2360649136.9578485
[2024-05-23 23:31:02] 2024-05-23 21:30:46,311 | INFO     | intersect: -2360649136.9578485
[2024-05-23 23:31:02] 2024-05-23 21:30:46,312 | INFO     | chi2: 0.0016658934732184198
[2024-05-23 23:31:02] 2024-05-23 21:30:46,312 | INFO     | current chi2=0.0016658934732184198 (change=96.84340885653087 %)
[2024-05-23 23:31:02] 2024-05-23 21:30:46,312 | INFO     | model: linear, x: [1716483803.0, 1716483864.0, 1716483925.0, 1716483986.0, 1716484047.0, 1716484108.0, 1716484169.0, 1716484230.0, 1716484291.0, 1716484352.0, 1716
[2024-05-23 23:31:02] 2024-05-23 21:30:46,312 | INFO     | sum of square deviations: 5640782972.0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,314 | INFO     | sum of deviations: 7616263275.0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,314 | INFO     | mean x: 1716491794.0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,314 | INFO     | mean y: 2355447.91634981
[2024-05-23 23:31:02] 2024-05-23 21:30:46,314 | INFO     | -- intersect: -2315275540.0820775
[2024-05-23 23:31:02] 2024-05-23 21:30:46,314 | INFO     | intersect: -2315275540.0820775
[2024-05-23 23:31:02] 2024-05-23 21:30:46,315 | INFO     | chi2: 0.0015896689421178991
[2024-05-23 23:31:02] 2024-05-23 21:30:46,315 | INFO     | current chi2=0.0015896689421178991 (change=4.575594557871631 %)
[2024-05-23 23:31:02] 2024-05-23 21:30:46,315 | INFO     | left removable region: 40
[2024-05-23 23:31:02] 2024-05-23 21:30:46,315 | INFO     | model: linear, x: [1716485023.0, 1716485084.0, 1716485145.0, 1716485206.0, 1716485267.0, 1716485328.0, 1716485389.0, 1716485450.0, 1716485511.0, 1716485572.0, 1716
[2024-05-23 23:31:02] 2024-05-23 21:30:46,315 | INFO     | sum of square deviations: 4127772278.0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,317 | INFO     | sum of deviations: 5775969219.999999
[2024-05-23 23:31:02] 2024-05-23 21:30:46,317 | INFO     | mean x: 1716492221.0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,317 | INFO     | mean y: 2356102.3206751053
[2024-05-23 23:31:02] 2024-05-23 21:30:46,317 | INFO     | -- intersect: -2399522094.232647
[2024-05-23 23:31:02] 2024-05-23 21:30:46,317 | INFO     | intersect: -2399522094.232647
[2024-05-23 23:31:02] 2024-05-23 21:30:46,318 | INFO     | chi2: 0.0008293330160303893
[2024-05-23 23:31:02] 2024-05-23 21:30:46,318 | INFO     | -- intersect: -2399522094.232647
[2024-05-23 23:31:02] 2024-05-23 21:30:46,318 | INFO     | current memory leak: 1.40 B/s (using 237 data points, chi2=0.00)
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | ..............................
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | . Timing measurements:
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | . get job = 0 s
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | . initial setup = 1 s
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | . payload setup = 5 s
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | . stage-in = 0 s
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | . payload execution = 17258 s
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | . stage-out = 0 s
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | . log creation = 0 s
[2024-05-23 23:31:02] 2024-05-23 21:30:46,319 | INFO     | ..............................
[2024-05-23 23:31:02] 2024-05-23 21:30:46,416 | INFO     | 
[2024-05-23 23:31:02] 2024-05-23 21:30:46,416 | INFO     | job summary report
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | --------------------------------------------------
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | PanDA job id: 6207775422
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | task id: 38920982
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | errors: (none)
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | pilot state: finished 
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | transexitcode: 0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | exeerrorcode: 0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | exeerrordiag: 
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | exitcode: 0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,417 | INFO     | exitmsg: OK
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | cpuconsumptiontime: 66061 s
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | nevents: 400
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | neventsw: 0
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | pid: 744765
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | pgrp: 744765
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | corecount: 4
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | event service: False
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | sizes: {0: 2378773, 1: 2378773, 5: 2379007, 11: 2379063, 17265: 2411006, 17267: 2419988, 17268: 2420172, 17273: 2420342}
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | --------------------------------------------------
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | 
[2024-05-23 23:31:02] 2024-05-23 21:30:46,418 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/1
[2024-05-23 23:31:02] 2024-05-23 21:30:46,501 | WARNING  | process 744765 is no longer using CPU - aborting
[2024-05-23 23:31:02] 2024-05-23 21:30:46,501 | INFO     | aborting job monitoring since job object (job id=6207775422) has expired
[2024-05-23 23:31:02] 2024-05-23 21:30:46,512 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,512 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,514 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,514 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,514 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,514 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,514 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-23 23:31:02] 2024-05-23 21:30:46,514 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,514 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-23 23:31:02] 2024-05-23 21:30:46,514 | INFO     | job 6207775422 has completed (purged errors)
[2024-05-23 23:31:02] 2024-05-23 21:30:46,514 | INFO     | overall cleanup function is called
[2024-05-23 23:31:02] 2024-05-23 21:30:47,522 | INFO     | --- collectZombieJob: --- 10, [744765]
[2024-05-23 23:31:02] 2024-05-23 21:30:47,522 | INFO     | zombie collector waiting for pid 744765
[2024-05-23 23:31:02] 2024-05-23 21:30:47,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-23 23:31:02] 2024-05-23 21:30:48,527 | INFO     | collected zombie processes
[2024-05-23 23:31:02] 2024-05-23 21:30:48,527 | INFO     | will now attempt to kill all subprocesses of pid=744765
[2024-05-23 23:31:02] 2024-05-23 21:30:48,733 | INFO     | process IDs to be killed: [744765] (in reverse order)
[2024-05-23 23:31:02] 2024-05-23 21:30:48,884 | WARNING  | found no corresponding commands to process id(s)
[2024-05-23 23:31:02] 2024-05-23 21:30:48,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-23 23:31:02] 2024-05-23 21:30:48,897 | INFO     | did not find any defunct processes belonging to 744765
[2024-05-23 23:31:02] 2024-05-23 21:30:48,908 | INFO     | did not find any defunct processes belonging to 744765
[2024-05-23 23:31:02] 2024-05-23 21:30:48,908 | INFO     | ready for new job
[2024-05-23 23:31:02] 2024-05-23 21:30:48,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-23 23:31:02] 2024-05-23 21:30:48,910 | INFO     | *************************************
[2024-05-23 23:31:02] 2024-05-23 21:30:48,910 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-23 23:31:02] 2024-05-23 21:30:48,910 | INFO     | *************************************
[2024-05-23 23:31:02] 2024-05-23 21:30:48,910 | INFO     | 
[2024-05-23 23:31:02] 2024-05-23 21:30:48,915 | INFO     | architecture information:
[2024-05-23 23:31:02] 2024-05-23 21:30:48,915 | INFO     | executing command: cat /etc/os-release
[2024-05-23 23:31:02] 2024-05-23 21:30:48,932 | INFO     | cat /etc/os-release:
[2024-05-23 23:31:02] NAME="CentOS Linux"
[2024-05-23 23:31:02] VERSION="7 (Core)"
[2024-05-23 23:31:02] ID="centos"
[2024-05-23 23:31:02] ID_LIKE="rhel fedora"
[2024-05-23 23:31:02] VERSION_ID="7"
[2024-05-23 23:31:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-23 23:31:02] ANSI_COLOR="0;31"
[2024-05-23 23:31:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-23 23:31:02] HOME_URL="https://www.centos.org/"
[2024-05-23 23:31:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-23 23:31:02] 
[2024-05-23 23:31:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-23 23:31:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-23 23:31:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-23 23:31:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-23 23:31:02] 
[2024-05-23 23:31:02] 2024-05-23 21:30:48,932 | INFO     | *************************************
[2024-05-23 23:31:02] 2024-05-23 21:30:49,434 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/1
[2024-05-23 23:31:02] 2024-05-23 21:30:49,453 | INFO     | sufficient remaining disk space (3171116122112 B)
[2024-05-23 23:31:02] 2024-05-23 21:30:49,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-23 23:31:02] 2024-05-23 21:30:49,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-23 23:31:02] 2024-05-23 21:30:49,572 | INFO     | all data control threads have been joined
[2024-05-23 23:31:02] 2024-05-23 21:30:49,784 | INFO     | found 0 job(s) in 20 queues
[2024-05-23 23:31:02] 2024-05-23 21:30:49,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-23 23:31:02] 2024-05-23 21:30:49,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-23 23:31:02] 2024-05-23 21:30:49,968 | INFO     | all payload control threads have been joined
[2024-05-23 23:31:02] 2024-05-23 21:30:50,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-23 23:31:02] 2024-05-23 21:30:50,010 | INFO     | aborting loop
[2024-05-23 23:31:02] 2024-05-23 21:30:50,460 | INFO     | [job] retrieve thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:50,577 | INFO     | [data] control thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:50,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-23 23:31:02] 2024-05-23 21:30:50,687 | INFO     | [payload] failed_post thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:50,725 | INFO     | [job] create_data_payload thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:50,884 | INFO     | all job control threads have been joined
[2024-05-23 23:31:02] 2024-05-23 21:30:50,970 | INFO     | [payload] validate_pre thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:50,973 | INFO     | [payload] control thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:50,974 | INFO     | [payload] execute_payloads thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:51,014 | INFO     | [job] job monitor thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:51,248 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-23 23:31:02] 2024-05-23 21:30:51,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-23 23:31:02] 2024-05-23 21:30:51,559 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:51,645 | INFO     | [data] copytool_in thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:51,732 | INFO     | [job] validate thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:51,887 | INFO     | [payload] validate_post thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:51,889 | INFO     | [job] control thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:52,430 | INFO     | [job] queue monitor thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:52,640 | INFO     | [data] copytool_out thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:55,254 | INFO     | [data] queue_monitor thread has finished
[2024-05-23 23:31:02] 2024-05-23 21:30:56,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47755353502784)>', '<ExcThread(monitor, started 47755528955648)>']
[2024-05-23 23:31:02] 2024-05-23 21:30:56,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-23 23:31:02] 2024-05-23 21:30:56,819 | INFO     | [monitor] control thread has ended
[2024-05-23 23:31:02] 2024-05-23 21:31:01,110 | INFO     | all workflow threads have been joined
[2024-05-23 23:31:02] 2024-05-23 21:31:01,110 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-23 23:31:02] 2024-05-23 21:31:01,111 | INFO     | traces error code: 0
[2024-05-23 23:31:02] 2024-05-23 21:31:01,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-23 23:31:02] 2024-05-23 21:31:01,189 [wrapper] ==== pilot stdout END ====
[2024-05-23 23:31:02] 2024-05-23 21:31:01,192 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-23 23:31:02] 2024-05-23 21:31:01,195 [wrapper] pilotpid: 736756
[2024-05-23 23:31:02] 2024-05-23 21:31:01,197 [wrapper] Pilot exit status: 0
[2024-05-23 23:31:02] 2024-05-23 21:31:01,221 [wrapper] pandaids: 6207775422
[2024-05-23 23:31:02] 2024-05-23 21:31:01,349 [wrapper] cleanup: SIGTERM to supervisor_pilot 2780534 736757
[2024-05-23 23:31:02] 2024-05-23 21:31:01,352 [wrapper] Test setup, not cleaning
[2024-05-23 23:31:02] 2024-05-23 21:31:01,355 [wrapper] ==== wrapper stdout END ====
[2024-05-23 23:31:02] 2024-05-23 21:31:01,357 [wrapper] ==== wrapper stderr END ====
[2024-05-23 23:31:02] 2024-05-23 21:31:01,366 [wrapper] apfmon messages muted
[2024-05-23 23:31:02]  *** Error codes and diagnostics ***
[2024-05-23 23:31:02]     "exeErrorCode": 0,
[2024-05-23 23:31:02]     "exeErrorDiag": "",
[2024-05-23 23:31:02]     "pilotErrorCode": 0,
[2024-05-23 23:31:02]     "pilotErrorDiag": "",
[2024-05-23 23:31:02]  *** Listing of results directory ***
[2024-05-23 23:31:02] total 930144
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc    467845 May 17 07:18 pilot3.tar.gz
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc      5633 May 17 07:27 queuedata.json
[2024-05-23 23:31:02] -rwx------ 1 boinc boinc     32251 May 17 07:27 runpilot2-wrapper.sh
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc       100 May 23 18:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-23 23:31:02] -rwxr-xr-x 1 boinc boinc      7986 May 23 18:05 run_atlas
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc       105 May 23 18:05 job.xml
[2024-05-23 23:31:02] -rw-r--r-- 2 boinc boinc 633265943 May 23 18:42 EVNT.38776160._000064.pool.root.1
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc      6643 May 23 18:42 init_data.xml
[2024-05-23 23:31:02] -rw-r--r-- 2 boinc boinc     17537 May 23 18:42 start_atlas.sh
[2024-05-23 23:31:02] drwxrwx--x 2 boinc boinc      4096 May 23 18:42 shared
[2024-05-23 23:31:02] -rw-r--r-- 2 boinc boinc    480004 May 23 18:42 input.tar.gz
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc         0 May 23 18:42 boinc_lockfile
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc      2625 May 23 18:42 pandaJob.out
[2024-05-23 23:31:02] -rw------- 1 boinc boinc       424 May 23 18:42 setup.sh.local
[2024-05-23 23:31:02] -rw------- 1 boinc boinc   1009177 May 23 18:42 agis_schedconf.cvmfs.json
[2024-05-23 23:31:02] -rw------- 1 boinc boinc   1317222 May 23 18:42 cric_ddmendpoints.json
[2024-05-23 23:31:02] drwx------ 4 boinc boinc      4096 May 23 18:42 pilot3
[2024-05-23 23:31:02] -rw------- 1 boinc boinc 311179517 May 23 23:30 HITS.38920982._003157.pool.root.1
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc       531 May 23 23:30 boinc_task_state.xml
[2024-05-23 23:31:02] -rw------- 1 boinc boinc        95 May 23 23:30 pilot_heartbeat.json
[2024-05-23 23:31:02] -rw------- 1 boinc boinc      1044 May 23 23:30 memory_monitor_summary.json
[2024-05-23 23:31:02] -rw------- 1 boinc boinc         0 May 23 23:30 agis_ddmendpoints.agis.ALL.json
[2024-05-23 23:31:02] -rw------- 1 boinc boinc    388220 May 23 23:30 log.38920982._003157.job.log.tgz.1
[2024-05-23 23:31:02] -rw------- 1 boinc boinc      7718 May 23 23:30 heartbeat.json
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc      8192 May 23 23:31 boinc_mmap_file
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc        28 May 23 23:31 wrapper_checkpoint.txt
[2024-05-23 23:31:02] -rw------- 1 boinc boinc      4222 May 23 23:31 pilotlog.txt
[2024-05-23 23:31:02] -rw------- 1 boinc boinc   1864047 May 23 23:31 log.38920982._003157.job.log.1
[2024-05-23 23:31:02] -rw------- 1 boinc boinc       357 May 23 23:31 output.list
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc       620 May 23 23:31 runtime_log
[2024-05-23 23:31:02] -rw------- 1 boinc boinc   2273280 May 23 23:31 result.tar.gz
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc     11410 May 23 23:31 runtime_log.err
[2024-05-23 23:31:02] -rw------- 1 boinc boinc       658 May 23 23:31 RJUMDm5I5R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmuaQKDmRSIWwn.diag
[2024-05-23 23:31:02] -rw-r--r-- 1 boinc boinc     21357 May 23 23:31 stderr.txt
[2024-05-23 23:31:02] HITS file was successfully produced:
[2024-05-23 23:31:02] -rw------- 1 boinc boinc 311179517 May 23 23:30 shared/HITS.pool.root.1
[2024-05-23 23:31:02]  *** Contents of shared directory: ***
[2024-05-23 23:31:02] total 925032
[2024-05-23 23:31:02] -rw-r--r-- 2 boinc boinc 633265943 May 23 18:42 ATLAS.root_0
[2024-05-23 23:31:02] -rw-r--r-- 2 boinc boinc     17537 May 23 18:42 start_atlas.sh
[2024-05-23 23:31:02] -rw-r--r-- 2 boinc boinc    480004 May 23 18:42 input.tar.gz
[2024-05-23 23:31:02] -rw------- 1 boinc boinc 311179517 May 23 23:30 HITS.pool.root.1
[2024-05-23 23:31:02] -rw------- 1 boinc boinc   2273280 May 23 23:31 result.tar.gz
23:31:03 (731796): run_atlas exited; CPU time 65669.938157
23:31:03 (731796): called boinc_finish(0)

</stderr_txt>
]]>

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