Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:34:19 (2031767): wrapper (7.7.26015): starting
09:34:19 (2031767): wrapper: running run_atlas (--nthreads 4)
[2024-05-21 09:34:19] Arguments: --nthreads 4
[2024-05-21 09:34:19] Threads: 4
[2024-05-21 09:34:19] Checking for CVMFS
[2024-05-21 09:34:19] No cvmfs_config command found, will try listing directly
[2024-05-21 09:34:19] CVMFS is ok
[2024-05-21 09:34:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-21 09:34:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-21 09:34:19] Further information can be found at the LHC@home message board.
[2024-05-21 09:34:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-21 09:34:19] Checking for apptainer binary...
[2024-05-21 09:34:19] which: no apptainer in ((null))
[2024-05-21 09:34:19] apptainer is not installed, using version from CVMFS
[2024-05-21 09:34:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-21 09:34:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-21 09:34:20] apptainer works
[2024-05-21 09:34:20] Set ATHENA_PROC_NUMBER=4
[2024-05-21 09:34:20] Set ATHENA_CORE_NUMBER=4
[2024-05-21 09:34:20] Starting ATLAS job with PandaID=6207734058
[2024-05-21 09:34:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-21 11:39:52]  *** The last 200 lines of the pilot log: ***
[2024-05-21 11:39:52] 2024-05-21 09:39:31,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-21 11:39:52] 2024-05-21 09:39:31,714 | INFO     | fitting pss+swap vs Time
[2024-05-21 11:39:52] 2024-05-21 09:39:31,714 | INFO     | model: linear, x: [1716276898.0, 1716276959.0, 1716277020.0, 1716277081.0, 1716277142.0, 1716277203.0, 1716277264.0, 1716277325.0, 1716277386.0, 1716277447.0, 1716
[2024-05-21 11:39:52] 2024-05-21 09:39:31,715 | INFO     | sum of square deviations: 576985702.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,715 | INFO     | sum of deviations: 36309250881.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,716 | INFO     | mean x: 1716280619.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,716 | INFO     | mean y: 2247742.5772357723
[2024-05-21 11:39:52] 2024-05-21 09:39:31,716 | INFO     | -- intersect: -108001925257.65591
[2024-05-21 11:39:52] 2024-05-21 09:39:31,716 | INFO     | intersect: -108001925257.65591
[2024-05-21 11:39:52] 2024-05-21 09:39:31,716 | INFO     | chi2: 4.856242757705384
[2024-05-21 11:39:52] 2024-05-21 09:39:31,717 | INFO     | model: linear, x: [1716276898.0, 1716276959.0, 1716277020.0, 1716277081.0, 1716277142.0, 1716277203.0, 1716277264.0, 1716277325.0, 1716277386.0, 1716277447.0, 1716
[2024-05-21 11:39:52] 2024-05-21 09:39:31,717 | INFO     | sum of square deviations: 509440249.5
[2024-05-21 11:39:52] 2024-05-21 09:39:31,718 | INFO     | sum of deviations: 42674376431.5
[2024-05-21 11:39:52] 2024-05-21 09:39:31,718 | INFO     | mean x: 1716280466.5
[2024-05-21 11:39:52] 2024-05-21 09:39:31,718 | INFO     | mean y: 2261515.0423728814
[2024-05-21 11:39:52] 2024-05-21 09:39:31,718 | INFO     | -- intersect: -143765724546.7881
[2024-05-21 11:39:52] 2024-05-21 09:39:31,718 | INFO     | intersect: -143765724546.7881
[2024-05-21 11:39:52] 2024-05-21 09:39:31,719 | INFO     | chi2: 4.020858115421934
[2024-05-21 11:39:52] 2024-05-21 09:39:31,719 | INFO     | current chi2=4.020858115421934 (change=17.202283410522423 %)
[2024-05-21 11:39:52] 2024-05-21 09:39:31,719 | INFO     | right removable region: 117
[2024-05-21 11:39:52] 2024-05-21 09:39:31,719 | INFO     | model: linear, x: [1716277203.0, 1716277264.0, 1716277325.0, 1716277386.0, 1716277447.0, 1716277508.0, 1716277569.0, 1716277630.0, 1716277691.0, 1716277752.0, 1716
[2024-05-21 11:39:52] 2024-05-21 09:39:31,719 | INFO     | sum of square deviations: 509440249.5
[2024-05-21 11:39:52] 2024-05-21 09:39:31,720 | INFO     | sum of deviations: 9117941694.000004
[2024-05-21 11:39:52] 2024-05-21 09:39:31,720 | INFO     | mean x: 1716280771.5
[2024-05-21 11:39:52] 2024-05-21 09:39:31,720 | INFO     | mean y: 2308837.9491525423
[2024-05-21 11:39:52] 2024-05-21 09:39:31,720 | INFO     | -- intersect: -30715617396.63735
[2024-05-21 11:39:52] 2024-05-21 09:39:31,720 | INFO     | intersect: -30715617396.63735
[2024-05-21 11:39:52] 2024-05-21 09:39:31,721 | INFO     | chi2: 2.3861152529795557
[2024-05-21 11:39:52] 2024-05-21 09:39:31,721 | INFO     | current chi2=2.3861152529795557 (change=50.86499229896374 %)
[2024-05-21 11:39:52] 2024-05-21 09:39:31,721 | INFO     | model: linear, x: [1716277508.0, 1716277569.0, 1716277630.0, 1716277691.0, 1716277752.0, 1716277813.0, 1716277874.0, 1716277935.0, 1716277996.0, 1716278057.0, 1716
[2024-05-21 11:39:52] 2024-05-21 09:39:31,721 | INFO     | sum of square deviations: 447383272.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,722 | INFO     | sum of deviations: -12334823664.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,722 | INFO     | mean x: 1716280924.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,722 | INFO     | mean y: 2361578.592920354
[2024-05-21 11:39:52] 2024-05-21 09:39:31,722 | INFO     | -- intersect: 47322017632.758
[2024-05-21 11:39:52] 2024-05-21 09:39:31,722 | INFO     | intersect: 47322017632.758
[2024-05-21 11:39:52] 2024-05-21 09:39:31,722 | INFO     | chi2: 0.9580847001925665
[2024-05-21 11:39:52] 2024-05-21 09:39:31,722 | INFO     | current chi2=0.9580847001925665 (change=59.84750950331503 %)
[2024-05-21 11:39:52] 2024-05-21 09:39:31,723 | INFO     | model: linear, x: [1716277813.0, 1716277874.0, 1716277935.0, 1716277996.0, 1716278057.0, 1716278118.0, 1716278179.0, 1716278240.0, 1716278301.0, 1716278362.0, 1716
[2024-05-21 11:39:52] 2024-05-21 09:39:31,723 | INFO     | sum of square deviations: 390582207.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,723 | INFO     | sum of deviations: -13601202604.5
[2024-05-21 11:39:52] 2024-05-21 09:39:31,723 | INFO     | mean x: 1716281076.5
[2024-05-21 11:39:52] 2024-05-21 09:39:31,724 | INFO     | mean y: 2364792.935185185
[2024-05-21 11:39:52] 2024-05-21 09:39:31,724 | INFO     | -- intersect: 59768237967.35213
[2024-05-21 11:39:52] 2024-05-21 09:39:31,724 | INFO     | intersect: 59768237967.35213
[2024-05-21 11:39:52] 2024-05-21 09:39:31,724 | INFO     | chi2: 0.9147913281999114
[2024-05-21 11:39:52] 2024-05-21 09:39:31,724 | INFO     | current chi2=0.9147913281999114 (change=4.518741608539784 %)
[2024-05-21 11:39:52] 2024-05-21 09:39:31,724 | INFO     | left removable region: 30
[2024-05-21 11:39:52] 2024-05-21 09:39:31,724 | INFO     | model: linear, x: [1716278728.0, 1716278789.0, 1716278850.0, 1716278911.0, 1716278972.0, 1716279033.0, 1716279094.0, 1716279155.0, 1716279216.0, 1716279277.0, 1716
[2024-05-21 11:39:52] 2024-05-21 09:39:31,725 | INFO     | sum of square deviations: 204163828.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,725 | INFO     | sum of deviations: -2330943224.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,725 | INFO     | mean x: 1716281351.0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,725 | INFO     | mean y: 2372891.091954023
[2024-05-21 11:39:52] 2024-05-21 09:39:31,725 | INFO     | -- intersect: 19597197423.824635
[2024-05-21 11:39:52] 2024-05-21 09:39:31,726 | INFO     | intersect: 19597197423.824635
[2024-05-21 11:39:52] 2024-05-21 09:39:31,726 | INFO     | chi2: 0.015199832683617565
[2024-05-21 11:39:52] 2024-05-21 09:39:31,726 | INFO     | -- intersect: 19597197423.824635
[2024-05-21 11:39:52] 2024-05-21 09:39:31,726 | INFO     | current memory leak: -11.42 B/s (using 87 data points, chi2=0.02)
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | ..............................
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | . Timing measurements:
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | . get job = 0 s
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | . initial setup = 1 s
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | . payload setup = 6 s
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | . stage-in = 0 s
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | . payload execution = 7469 s
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | . stage-out = 0 s
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | . log creation = 0 s
[2024-05-21 11:39:52] 2024-05-21 09:39:31,727 | INFO     | ..............................
[2024-05-21 11:39:52] 2024-05-21 09:39:31,820 | INFO     | 
[2024-05-21 11:39:52] 2024-05-21 09:39:31,820 | INFO     | job summary report
[2024-05-21 11:39:52] 2024-05-21 09:39:31,820 | INFO     | --------------------------------------------------
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | PanDA job id: 6207734058
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | task id: 38776104
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | errors: (none)
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | pilot state: finished 
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | transexitcode: 0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | exeerrorcode: 0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | exeerrordiag: 
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | exitcode: 0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | exitmsg: OK
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | cpuconsumptiontime: 27332 s
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | nevents: 400
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | neventsw: 0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | pid: 2053377
[2024-05-21 11:39:52] 2024-05-21 09:39:31,821 | INFO     | pgrp: 2053377
[2024-05-21 11:39:52] 2024-05-21 09:39:31,822 | INFO     | corecount: 4
[2024-05-21 11:39:52] 2024-05-21 09:39:31,822 | INFO     | event service: False
[2024-05-21 11:39:52] 2024-05-21 09:39:31,822 | INFO     | sizes: {0: 2392215, 5: 2392421, 11: 2392477, 7479: 2419983, 7480: 2428967, 7481: 2429023, 7486: 2429321}
[2024-05-21 11:39:52] 2024-05-21 09:39:31,822 | INFO     | --------------------------------------------------
[2024-05-21 11:39:52] 2024-05-21 09:39:31,822 | INFO     | 
[2024-05-21 11:39:52] 2024-05-21 09:39:31,822 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2024-05-21 11:39:52] 2024-05-21 09:39:31,838 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,838 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,838 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,838 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | job 6207734058 has completed (purged errors)
[2024-05-21 11:39:52] 2024-05-21 09:39:31,839 | INFO     | overall cleanup function is called
[2024-05-21 11:39:52] 2024-05-21 09:39:32,845 | INFO     | --- collectZombieJob: --- 10, [2053377]
[2024-05-21 11:39:52] 2024-05-21 09:39:32,846 | INFO     | zombie collector waiting for pid 2053377
[2024-05-21 11:39:52] 2024-05-21 09:39:32,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-21 11:39:52] 2024-05-21 09:39:33,851 | INFO     | collected zombie processes
[2024-05-21 11:39:52] 2024-05-21 09:39:33,851 | INFO     | will now attempt to kill all subprocesses of pid=2053377
[2024-05-21 11:39:52] 2024-05-21 09:39:34,067 | INFO     | process IDs to be killed: [2053377] (in reverse order)
[2024-05-21 11:39:52] 2024-05-21 09:39:34,247 | WARNING  | found no corresponding commands to process id(s)
[2024-05-21 11:39:52] 2024-05-21 09:39:34,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-21 11:39:52] 2024-05-21 09:39:34,263 | INFO     | did not find any defunct processes belonging to 2053377
[2024-05-21 11:39:52] 2024-05-21 09:39:34,278 | INFO     | did not find any defunct processes belonging to 2053377
[2024-05-21 11:39:52] 2024-05-21 09:39:34,278 | INFO     | ready for new job
[2024-05-21 11:39:52] 2024-05-21 09:39:34,278 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-21 11:39:52] 2024-05-21 09:39:34,280 | INFO     | *************************************
[2024-05-21 11:39:52] 2024-05-21 09:39:34,280 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-21 11:39:52] 2024-05-21 09:39:34,280 | INFO     | *************************************
[2024-05-21 11:39:52] 2024-05-21 09:39:34,280 | INFO     | 
[2024-05-21 11:39:52] 2024-05-21 09:39:34,284 | INFO     | architecture information:
[2024-05-21 11:39:52] 2024-05-21 09:39:34,285 | INFO     | executing command: cat /etc/os-release
[2024-05-21 11:39:52] 2024-05-21 09:39:34,301 | INFO     | cat /etc/os-release:
[2024-05-21 11:39:52] NAME="CentOS Linux"
[2024-05-21 11:39:52] VERSION="7 (Core)"
[2024-05-21 11:39:52] ID="centos"
[2024-05-21 11:39:52] ID_LIKE="rhel fedora"
[2024-05-21 11:39:52] VERSION_ID="7"
[2024-05-21 11:39:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-21 11:39:52] ANSI_COLOR="0;31"
[2024-05-21 11:39:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-21 11:39:52] HOME_URL="https://www.centos.org/"
[2024-05-21 11:39:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-21 11:39:52] 
[2024-05-21 11:39:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-21 11:39:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-21 11:39:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-21 11:39:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-21 11:39:52] 
[2024-05-21 11:39:52] 2024-05-21 09:39:34,302 | INFO     | *************************************
[2024-05-21 11:39:52] 2024-05-21 09:39:34,805 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2024-05-21 11:39:52] 2024-05-21 09:39:34,829 | INFO     | sufficient remaining disk space (2986512220160 B)
[2024-05-21 11:39:52] 2024-05-21 09:39:34,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-21 11:39:52] 2024-05-21 09:39:34,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-21 11:39:52] 2024-05-21 09:39:34,831 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-21 11:39:52] 2024-05-21 09:39:34,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-21 11:39:52] 2024-05-21 09:39:34,834 | INFO     | found 0 job(s) in 20 queues
[2024-05-21 11:39:52] 2024-05-21 09:39:34,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-21 11:39:52] 2024-05-21 09:39:34,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-21 11:39:52] 2024-05-21 09:39:35,024 | INFO     | all job control threads have been joined
[2024-05-21 11:39:52] 2024-05-21 09:39:35,214 | INFO     | all payload control threads have been joined
[2024-05-21 11:39:52] 2024-05-21 09:39:35,622 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-21 11:39:52] 2024-05-21 09:39:35,623 | INFO     | aborting loop
[2024-05-21 11:39:52] 2024-05-21 09:39:35,836 | INFO     | [job] retrieve thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:35,927 | INFO     | all data control threads have been joined
[2024-05-21 11:39:52] 2024-05-21 09:39:35,940 | INFO     | [payload] validate_post thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,030 | INFO     | [job] control thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,219 | INFO     | [payload] control thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,387 | INFO     | [job] validate thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,446 | INFO     | [data] copytool_in thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,470 | INFO     | [payload] execute_payloads thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,493 | INFO     | [job] create_data_payload thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,628 | INFO     | [job] job monitor thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,670 | INFO     | [payload] validate_pre thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-21 11:39:52] 2024-05-21 09:39:36,840 | INFO     | [data] copytool_out thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,924 | INFO     | [payload] failed_post thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:36,932 | INFO     | [data] control thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:37,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-21 11:39:52] 2024-05-21 09:39:37,836 | INFO     | [job] queue monitor thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:41,304 | INFO     | [data] queue_monitor thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:45,413 | INFO     | job.realtimelogging is not enabled
[2024-05-21 11:39:52] 2024-05-21 09:39:46,419 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-21 11:39:52] 2024-05-21 09:39:46,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47732646396992)>', '<ExcThread(monitor, started 47732826314496)>']
[2024-05-21 11:39:52] 2024-05-21 09:39:46,894 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-21 11:39:52] 2024-05-21 09:39:46,895 | INFO     | [monitor] control thread has ended
[2024-05-21 11:39:52] 2024-05-21 09:39:51,853 | INFO     | all workflow threads have been joined
[2024-05-21 11:39:52] 2024-05-21 09:39:51,854 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-21 11:39:52] 2024-05-21 09:39:51,854 | INFO     | traces error code: 0
[2024-05-21 11:39:52] 2024-05-21 09:39:51,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-21 11:39:52] 2024-05-21 09:39:51,958 [wrapper] ==== pilot stdout END ====
[2024-05-21 11:39:52] 2024-05-21 09:39:51,961 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-21 11:39:52] 2024-05-21 09:39:51,963 [wrapper] pilotpid: 2036444
[2024-05-21 11:39:52] 2024-05-21 09:39:51,965 [wrapper] Pilot exit status: 0
[2024-05-21 11:39:52] 2024-05-21 09:39:51,973 [wrapper] pandaids: 6207734058
[2024-05-21 11:39:52] 2024-05-21 09:39:52,068 [wrapper] cleanup: SIGTERM to supervisor_pilot 2500200 2036445
[2024-05-21 11:39:52] 2024-05-21 09:39:52,070 [wrapper] Test setup, not cleaning
[2024-05-21 11:39:52] 2024-05-21 09:39:52,072 [wrapper] ==== wrapper stdout END ====
[2024-05-21 11:39:52] 2024-05-21 09:39:52,074 [wrapper] ==== wrapper stderr END ====
[2024-05-21 11:39:52] 2024-05-21 09:39:52,079 [wrapper] apfmon messages muted
[2024-05-21 11:39:52]  *** Error codes and diagnostics ***
[2024-05-21 11:39:52]     "exeErrorCode": 0,
[2024-05-21 11:39:52]     "exeErrorDiag": "",
[2024-05-21 11:39:52]     "pilotErrorCode": 0,
[2024-05-21 11:39:52]     "pilotErrorDiag": "",
[2024-05-21 11:39:52]  *** Listing of results directory ***
[2024-05-21 11:39:52] total 812876
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc    467845 May 17 05:26 pilot3.tar.gz
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc      5633 May 17 05:46 queuedata.json
[2024-05-21 11:39:52] -rwx------ 1 boinc boinc     32251 May 17 05:47 runpilot2-wrapper.sh
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc       100 May 21 09:34 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-21 11:39:52] -rwxr-xr-x 1 boinc boinc      7986 May 21 09:34 run_atlas
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc       105 May 21 09:34 job.xml
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc      6643 May 21 09:34 init_data.xml
[2024-05-21 11:39:52] -rw-r--r-- 2 boinc boinc 596944638 May 21 09:34 EVNT.38776100._000124.pool.root.1
[2024-05-21 11:39:52] -rw-r--r-- 2 boinc boinc     17537 May 21 09:34 start_atlas.sh
[2024-05-21 11:39:52] drwxrwx--x 2 boinc boinc      4096 May 21 09:34 shared
[2024-05-21 11:39:52] -rw-r--r-- 2 boinc boinc    480012 May 21 09:34 input.tar.gz
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc         0 May 21 09:34 boinc_lockfile
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc      2642 May 21 09:34 pandaJob.out
[2024-05-21 11:39:52] -rw------- 1 boinc boinc       424 May 21 09:34 setup.sh.local
[2024-05-21 11:39:52] -rw------- 1 boinc boinc   1013555 May 21 09:34 agis_schedconf.cvmfs.json
[2024-05-21 11:39:52] -rw------- 1 boinc boinc         0 May 21 09:34 agis_ddmendpoints.agis.ALL.json
[2024-05-21 11:39:52] -rw------- 1 boinc boinc   1324701 May 21 09:34 cric_ddmendpoints.json
[2024-05-21 11:39:52] drwx------ 4 boinc boinc      4096 May 21 09:34 pilot3
[2024-05-21 11:39:52] -rw------- 1 boinc boinc        95 May 21 11:38 pilot_heartbeat.json
[2024-05-21 11:39:52] -rw------- 1 boinc boinc 229821562 May 21 11:38 HITS.38776104._011924.pool.root.1
[2024-05-21 11:39:52] -rw------- 1 boinc boinc      1040 May 21 11:39 memory_monitor_summary.json
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc       531 May 21 11:39 boinc_task_state.xml
[2024-05-21 11:39:52] -rw------- 1 boinc boinc    266667 May 21 11:39 log.38776104._011924.job.log.tgz.1
[2024-05-21 11:39:52] -rw------- 1 boinc boinc      7717 May 21 11:39 heartbeat.json
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc      8192 May 21 11:39 boinc_mmap_file
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc        27 May 21 11:39 wrapper_checkpoint.txt
[2024-05-21 11:39:52] -rw------- 1 boinc boinc      4418 May 21 11:39 pilotlog.txt
[2024-05-21 11:39:52] -rw------- 1 boinc boinc    775871 May 21 11:39 log.38776104._011924.job.log.1
[2024-05-21 11:39:52] -rw------- 1 boinc boinc       357 May 21 11:39 output.list
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc       620 May 21 11:39 runtime_log
[2024-05-21 11:39:52] -rw------- 1 boinc boinc   1064960 May 21 11:39 result.tar.gz
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc     11428 May 21 11:39 runtime_log.err
[2024-05-21 11:39:52] -rw------- 1 boinc boinc       655 May 21 11:39 krtKDmkk3R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmBUQKDmLokwMo.diag
[2024-05-21 11:39:52] -rw-r--r-- 1 boinc boinc     21301 May 21 11:39 stderr.txt
[2024-05-21 11:39:52] HITS file was successfully produced:
[2024-05-21 11:39:52] -rw------- 1 boinc boinc 229821562 May 21 11:38 shared/HITS.pool.root.1
[2024-05-21 11:39:52]  *** Contents of shared directory: ***
[2024-05-21 11:39:52] total 808932
[2024-05-21 11:39:52] -rw-r--r-- 2 boinc boinc 596944638 May 21 09:34 ATLAS.root_0
[2024-05-21 11:39:52] -rw-r--r-- 2 boinc boinc     17537 May 21 09:34 start_atlas.sh
[2024-05-21 11:39:52] -rw-r--r-- 2 boinc boinc    480012 May 21 09:34 input.tar.gz
[2024-05-21 11:39:52] -rw------- 1 boinc boinc 229821562 May 21 11:38 HITS.pool.root.1
[2024-05-21 11:39:52] -rw------- 1 boinc boinc   1064960 May 21 11:39 result.tar.gz
11:39:54 (2031767): run_atlas exited; CPU time 27167.331894
11:39:54 (2031767): called boinc_finish(0)

</stderr_txt>
]]>

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