Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:46 (977438): wrapper (7.7.26015): starting
02:51:46 (977438): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 02:51:46] Arguments: --nthreads 4
[2024-05-20 02:51:46] Threads: 4
[2024-05-20 02:51:46] Checking for CVMFS
[2024-05-20 02:51:46] No cvmfs_config command found, will try listing directly
[2024-05-20 02:51:46] CVMFS is ok
[2024-05-20 02:51:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 02:51:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 02:51:46] Further information can be found at the LHC@home message board.
[2024-05-20 02:51:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 02:51:46] Checking for apptainer binary...
[2024-05-20 02:51:46] which: no apptainer in ((null))
[2024-05-20 02:51:46] apptainer is not installed, using version from CVMFS
[2024-05-20 02:51:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 02:51:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-20 02:51:47] apptainer works
[2024-05-20 02:51:47] Set ATHENA_PROC_NUMBER=4
[2024-05-20 02:51:47] Set ATHENA_CORE_NUMBER=4
[2024-05-20 02:51:47] Starting ATLAS job with PandaID=6207725493
[2024-05-20 02:51:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 09:51:47]  *** The last 200 lines of the pilot log: ***
[2024-05-20 09:51:47] 2024-05-20 07:51:26,552 | INFO     | fitting pss+swap vs Time
[2024-05-20 09:51:47] 2024-05-20 07:51:26,553 | INFO     | model: linear, x: [1716166338.0, 1716166399.0, 1716166460.0, 1716166521.0, 1716166582.0, 1716166643.0, 1716166704.0, 1716166765.0, 1716166826.0, 1716166887.0, 1716
[2024-05-20 09:51:47] 2024-05-20 07:51:26,553 | INFO     | sum of square deviations: 21843691422.0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,557 | INFO     | sum of deviations: 187549935160.9999
[2024-05-20 09:51:47] 2024-05-20 07:51:26,557 | INFO     | mean x: 1716178904.0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,557 | INFO     | mean y: 2311066.4987893463
[2024-05-20 09:51:47] 2024-05-20 07:51:26,557 | INFO     | -- intersect: -14732801051.304861
[2024-05-20 09:51:47] 2024-05-20 07:51:26,558 | INFO     | intersect: -14732801051.304861
[2024-05-20 09:51:47] 2024-05-20 07:51:26,559 | INFO     | chi2: 4.896047811649194
[2024-05-20 09:51:47] 2024-05-20 07:51:26,559 | INFO     | model: linear, x: [1716166338.0, 1716166399.0, 1716166460.0, 1716166521.0, 1716166582.0, 1716166643.0, 1716166704.0, 1716166765.0, 1716166826.0, 1716166887.0, 1716
[2024-05-20 09:51:47] 2024-05-20 07:51:26,560 | INFO     | sum of square deviations: 21059899982.0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,567 | INFO     | sum of deviations: 211263916686.50003
[2024-05-20 09:51:47] 2024-05-20 07:51:26,567 | INFO     | mean x: 1716178751.5
[2024-05-20 09:51:47] 2024-05-20 07:51:26,567 | INFO     | mean y: 2315630.0857843137
[2024-05-20 09:51:47] 2024-05-20 07:51:26,568 | INFO     | -- intersect: -17213656197.22228
[2024-05-20 09:51:47] 2024-05-20 07:51:26,568 | INFO     | intersect: -17213656197.22228
[2024-05-20 09:51:47] 2024-05-20 07:51:26,568 | INFO     | chi2: 4.101779133511075
[2024-05-20 09:51:47] 2024-05-20 07:51:26,569 | INFO     | current chi2=4.101779133511075 (change=16.222649547014463 %)
[2024-05-20 09:51:47] 2024-05-20 07:51:26,569 | INFO     | right removable region: 407
[2024-05-20 09:51:47] 2024-05-20 07:51:26,569 | INFO     | model: linear, x: [1716166643.0, 1716166704.0, 1716166765.0, 1716166826.0, 1716166887.0, 1716166948.0, 1716167009.0, 1716167070.0, 1716167131.0, 1716167192.0, 1716
[2024-05-20 09:51:47] 2024-05-20 07:51:26,570 | INFO     | sum of square deviations: 21059899982.0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,577 | INFO     | sum of deviations: 89041083046.00003
[2024-05-20 09:51:47] 2024-05-20 07:51:26,577 | INFO     | mean x: 1716179056.5
[2024-05-20 09:51:47] 2024-05-20 07:51:26,577 | INFO     | mean y: 2330207.382352941
[2024-05-20 09:51:47] 2024-05-20 07:51:26,577 | INFO     | -- intersect: -7253660657.8273735
[2024-05-20 09:51:47] 2024-05-20 07:51:26,577 | INFO     | intersect: -7253660657.8273735
[2024-05-20 09:51:47] 2024-05-20 07:51:26,578 | INFO     | chi2: 2.3966317594603117
[2024-05-20 09:51:47] 2024-05-20 07:51:26,578 | INFO     | current chi2=2.3966317594603117 (change=51.04966594161944 %)
[2024-05-20 09:51:47] 2024-05-20 07:51:26,579 | INFO     | model: linear, x: [1716166948.0, 1716167009.0, 1716167070.0, 1716167131.0, 1716167192.0, 1716167253.0, 1716167314.0, 1716167375.0, 1716167436.0, 1716167497.0, 1716
[2024-05-20 09:51:47] 2024-05-20 07:51:26,579 | INFO     | sum of square deviations: 20295085642.0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,584 | INFO     | sum of deviations: 9048170869.999943
[2024-05-20 09:51:47] 2024-05-20 07:51:26,584 | INFO     | mean x: 1716179209.0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,584 | INFO     | mean y: 2346157.4863523575
[2024-05-20 09:51:47] 2024-05-20 07:51:26,584 | INFO     | -- intersect: -762779104.8795321
[2024-05-20 09:51:47] 2024-05-20 07:51:26,584 | INFO     | intersect: -762779104.8795321
[2024-05-20 09:51:47] 2024-05-20 07:51:26,585 | INFO     | chi2: 0.8775886127994368
[2024-05-20 09:51:47] 2024-05-20 07:51:26,585 | INFO     | current chi2=0.8775886127994368 (change=63.38241745586074 %)
[2024-05-20 09:51:47] 2024-05-20 07:51:26,585 | INFO     | model: linear, x: [1716167253.0, 1716167314.0, 1716167375.0, 1716167436.0, 1716167497.0, 1716167558.0, 1716167619.0, 1716167680.0, 1716167741.0, 1716167802.0, 1716
[2024-05-20 09:51:47] 2024-05-20 07:51:26,586 | INFO     | sum of square deviations: 19549015839.5
[2024-05-20 09:51:47] 2024-05-20 07:51:26,590 | INFO     | sum of deviations: -4787901650.999989
[2024-05-20 09:51:47] 2024-05-20 07:51:26,590 | INFO     | mean x: 1716179361.5
[2024-05-20 09:51:47] 2024-05-20 07:51:26,590 | INFO     | mean y: 2348977.5326633165
[2024-05-20 09:51:47] 2024-05-20 07:51:26,590 | INFO     | -- intersect: 422671824.7695664
[2024-05-20 09:51:47] 2024-05-20 07:51:26,590 | INFO     | intersect: 422671824.7695664
[2024-05-20 09:51:47] 2024-05-20 07:51:26,591 | INFO     | chi2: 0.8205420696260741
[2024-05-20 09:51:47] 2024-05-20 07:51:26,591 | INFO     | current chi2=0.8205420696260741 (change=6.5003741321789485 %)
[2024-05-20 09:51:47] 2024-05-20 07:51:26,591 | INFO     | left removable region: 30
[2024-05-20 09:51:47] 2024-05-20 07:51:26,591 | INFO     | model: linear, x: [1716168168.0, 1716168229.0, 1716168290.0, 1716168351.0, 1716168412.0, 1716168473.0, 1716168534.0, 1716168595.0, 1716168656.0, 1716168717.0, 1716
[2024-05-20 09:51:47] 2024-05-20 07:51:26,591 | INFO     | sum of square deviations: 16614964548.0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,595 | INFO     | sum of deviations: 16810035472.000002
[2024-05-20 09:51:47] 2024-05-20 07:51:26,596 | INFO     | mean x: 1716179636.0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,596 | INFO     | mean y: 2354940.1644562334
[2024-05-20 09:51:47] 2024-05-20 07:51:26,597 | INFO     | -- intersect: -1733973805.7766066
[2024-05-20 09:51:47] 2024-05-20 07:51:26,597 | INFO     | intersect: -1733973805.7766066
[2024-05-20 09:51:47] 2024-05-20 07:51:26,597 | INFO     | chi2: 0.0005192511443448976
[2024-05-20 09:51:47] 2024-05-20 07:51:26,597 | INFO     | -- intersect: -1733973805.7766066
[2024-05-20 09:51:47] 2024-05-20 07:51:26,597 | INFO     | current memory leak: 1.01 B/s (using 377 data points, chi2=0.00)
[2024-05-20 09:51:47] 2024-05-20 07:51:26,597 | INFO     | ..............................
[2024-05-20 09:51:47] 2024-05-20 07:51:26,598 | INFO     | . Timing measurements:
[2024-05-20 09:51:47] 2024-05-20 07:51:26,598 | INFO     | . get job = 0 s
[2024-05-20 09:51:47] 2024-05-20 07:51:26,598 | INFO     | . initial setup = 1 s
[2024-05-20 09:51:47] 2024-05-20 07:51:26,598 | INFO     | . payload setup = 4 s
[2024-05-20 09:51:47] 2024-05-20 07:51:26,598 | INFO     | . stage-in = 0 s
[2024-05-20 09:51:47] 2024-05-20 07:51:26,598 | INFO     | . payload execution = 25143 s
[2024-05-20 09:51:47] 2024-05-20 07:51:26,598 | INFO     | . stage-out = 1 s
[2024-05-20 09:51:47] 2024-05-20 07:51:26,598 | INFO     | . log creation = 0 s
[2024-05-20 09:51:47] 2024-05-20 07:51:26,598 | INFO     | ..............................
[2024-05-20 09:51:47] 2024-05-20 07:51:26,691 | WARNING  | process 988922 is no longer using CPU - aborting
[2024-05-20 09:51:47] 2024-05-20 07:51:26,691 | INFO     | aborting job monitoring since job object (job id=6207725493) has expired
[2024-05-20 09:51:47] 2024-05-20 07:51:26,913 | INFO     | 
[2024-05-20 09:51:47] 2024-05-20 07:51:26,914 | INFO     | job summary report
[2024-05-20 09:51:47] 2024-05-20 07:51:26,914 | INFO     | --------------------------------------------------
[2024-05-20 09:51:47] 2024-05-20 07:51:26,914 | INFO     | PanDA job id: 6207725493
[2024-05-20 09:51:47] 2024-05-20 07:51:26,914 | INFO     | task id: 38921001
[2024-05-20 09:51:47] 2024-05-20 07:51:26,914 | INFO     | errors: (none)
[2024-05-20 09:51:47] 2024-05-20 07:51:26,914 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 09:51:47] 2024-05-20 07:51:26,914 | INFO     | pilot state: finished 
[2024-05-20 09:51:47] 2024-05-20 07:51:26,914 | INFO     | transexitcode: 0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,914 | INFO     | exeerrorcode: 0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | exeerrordiag: 
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | exitcode: 0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | exitmsg: OK
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | cpuconsumptiontime: 97834 s
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | nevents: 400
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | neventsw: 0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | pid: 988922
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | pgrp: 988922
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | corecount: 4
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | event service: False
[2024-05-20 09:51:47] 2024-05-20 07:51:26,915 | INFO     | sizes: {0: 2392222, 4: 2392428, 11: 2392456, 25151: 2428245, 25152: 2428244, 25153: 2437466, 25158: 2437580}
[2024-05-20 09:51:47] 2024-05-20 07:51:26,916 | INFO     | --------------------------------------------------
[2024-05-20 09:51:47] 2024-05-20 07:51:26,916 | INFO     | 
[2024-05-20 09:51:47] 2024-05-20 07:51:26,916 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2024-05-20 09:51:47] 2024-05-20 07:51:26,943 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,943 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,943 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,943 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,943 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,943 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,943 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,944 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 09:51:47] 2024-05-20 07:51:26,945 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,945 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 09:51:47] 2024-05-20 07:51:26,945 | INFO     | job 6207725493 has completed (purged errors)
[2024-05-20 09:51:47] 2024-05-20 07:51:26,945 | INFO     | overall cleanup function is called
[2024-05-20 09:51:47] 2024-05-20 07:51:27,952 | INFO     | --- collectZombieJob: --- 10, [988922]
[2024-05-20 09:51:47] 2024-05-20 07:51:27,953 | INFO     | zombie collector waiting for pid 988922
[2024-05-20 09:51:47] 2024-05-20 07:51:27,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 09:51:47] 2024-05-20 07:51:28,958 | INFO     | collected zombie processes
[2024-05-20 09:51:47] 2024-05-20 07:51:28,958 | INFO     | will now attempt to kill all subprocesses of pid=988922
[2024-05-20 09:51:47] 2024-05-20 07:51:29,115 | INFO     | process IDs to be killed: [988922] (in reverse order)
[2024-05-20 09:51:47] 2024-05-20 07:51:29,223 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 09:51:47] 2024-05-20 07:51:29,223 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 09:51:47] 2024-05-20 07:51:29,232 | INFO     | did not find any defunct processes belonging to 988922
[2024-05-20 09:51:47] 2024-05-20 07:51:29,239 | INFO     | did not find any defunct processes belonging to 988922
[2024-05-20 09:51:47] 2024-05-20 07:51:29,239 | INFO     | ready for new job
[2024-05-20 09:51:47] 2024-05-20 07:51:29,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 09:51:47] 2024-05-20 07:51:29,241 | INFO     | *************************************
[2024-05-20 09:51:47] 2024-05-20 07:51:29,241 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 09:51:47] 2024-05-20 07:51:29,241 | INFO     | *************************************
[2024-05-20 09:51:47] 2024-05-20 07:51:29,241 | INFO     | 
[2024-05-20 09:51:47] 2024-05-20 07:51:29,244 | INFO     | architecture information:
[2024-05-20 09:51:47] 2024-05-20 07:51:29,244 | INFO     | executing command: cat /etc/os-release
[2024-05-20 09:51:47] 2024-05-20 07:51:29,257 | INFO     | cat /etc/os-release:
[2024-05-20 09:51:47] NAME="CentOS Linux"
[2024-05-20 09:51:47] VERSION="7 (Core)"
[2024-05-20 09:51:47] ID="centos"
[2024-05-20 09:51:47] ID_LIKE="rhel fedora"
[2024-05-20 09:51:47] VERSION_ID="7"
[2024-05-20 09:51:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 09:51:47] ANSI_COLOR="0;31"
[2024-05-20 09:51:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 09:51:47] HOME_URL="https://www.centos.org/"
[2024-05-20 09:51:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 09:51:47] 
[2024-05-20 09:51:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 09:51:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 09:51:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 09:51:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 09:51:47] 
[2024-05-20 09:51:47] 2024-05-20 07:51:29,258 | INFO     | *************************************
[2024-05-20 09:51:47] 2024-05-20 07:51:29,761 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2024-05-20 09:51:47] 2024-05-20 07:51:29,778 | INFO     | sufficient remaining disk space (582440976384 B)
[2024-05-20 09:51:47] 2024-05-20 07:51:29,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 09:51:47] 2024-05-20 07:51:29,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 09:51:47] 2024-05-20 07:51:29,787 | INFO     | all payload control threads have been joined
[2024-05-20 09:51:47] 2024-05-20 07:51:29,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 09:51:47] 2024-05-20 07:51:29,987 | INFO     | all data control threads have been joined
[2024-05-20 09:51:47] 2024-05-20 07:51:30,152 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 09:51:47] 2024-05-20 07:51:30,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 09:51:47] 2024-05-20 07:51:30,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 09:51:47] 2024-05-20 07:51:30,198 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 09:51:47] 2024-05-20 07:51:30,199 | INFO     | aborting loop
[2024-05-20 09:51:47] 2024-05-20 07:51:30,784 | INFO     | [job] retrieve thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:30,793 | INFO     | [payload] control thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:30,993 | INFO     | [data] control thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:31,163 | INFO     | [payload] validate_post thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:31,204 | INFO     | [job] job monitor thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:31,350 | INFO     | [data] copytool_in thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:31,366 | INFO     | all job control threads have been joined
[2024-05-20 09:51:47] 2024-05-20 07:51:31,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 09:51:47] 2024-05-20 07:51:31,758 | INFO     | [payload] failed_post thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:31,877 | INFO     | [data] copytool_out thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:32,011 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:32,091 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:32,165 | INFO     | [job] validate thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:32,172 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:32,372 | INFO     | [job] control thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:32,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 09:51:47] 2024-05-20 07:51:32,669 | INFO     | [job] queue monitor thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:36,441 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:40,024 | INFO     | job.realtimelogging is not enabled
[2024-05-20 09:51:47] 2024-05-20 07:51:41,029 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 09:51:47] 2024-05-20 07:51:41,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47505490097216)>', '<ExcThread(monitor, started 47505661347584)>']
[2024-05-20 09:51:47] 2024-05-20 07:51:42,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 09:51:47] 2024-05-20 07:51:42,212 | INFO     | [monitor] control thread has ended
[2024-05-20 09:51:47] 2024-05-20 07:51:46,818 | INFO     | all workflow threads have been joined
[2024-05-20 09:51:47] 2024-05-20 07:51:46,818 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 09:51:47] 2024-05-20 07:51:46,819 | INFO     | traces error code: 0
[2024-05-20 09:51:47] 2024-05-20 07:51:46,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 09:51:47] 2024-05-20 07:51:46,923 [wrapper] ==== pilot stdout END ====
[2024-05-20 09:51:47] 2024-05-20 07:51:46,925 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 09:51:47] 2024-05-20 07:51:46,927 [wrapper] pilotpid: 981792
[2024-05-20 09:51:47] 2024-05-20 07:51:46,929 [wrapper] Pilot exit status: 0
[2024-05-20 09:51:47] 2024-05-20 07:51:46,938 [wrapper] pandaids: 6207725493
[2024-05-20 09:51:47] 2024-05-20 07:51:47,002 [wrapper] cleanup: SIGTERM to supervisor_pilot 2204568 981793
[2024-05-20 09:51:47] 2024-05-20 07:51:47,005 [wrapper] Test setup, not cleaning
[2024-05-20 09:51:47] 2024-05-20 07:51:47,007 [wrapper] ==== wrapper stdout END ====
[2024-05-20 09:51:47] 2024-05-20 07:51:47,009 [wrapper] ==== wrapper stderr END ====
[2024-05-20 09:51:47] 2024-05-20 07:51:47,016 [wrapper] apfmon messages muted
[2024-05-20 09:51:47]  *** Error codes and diagnostics ***
[2024-05-20 09:51:47]     "exeErrorCode": 0,
[2024-05-20 09:51:47]     "exeErrorDiag": "",
[2024-05-20 09:51:47]     "pilotErrorCode": 0,
[2024-05-20 09:51:47]     "pilotErrorDiag": "",
[2024-05-20 09:51:47]  *** Listing of results directory ***
[2024-05-20 09:51:47] total 963528
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc    467845 May 17 05:26 pilot3.tar.gz
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc      5633 May 17 05:36 queuedata.json
[2024-05-20 09:51:47] -rwx------ 1 boinc boinc     32251 May 17 05:37 runpilot2-wrapper.sh
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc       100 May 20 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 09:51:47] -rwxr-xr-x 1 boinc boinc      7986 May 20 02:51 run_atlas
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc       105 May 20 02:51 job.xml
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc      6663 May 20 02:51 init_data.xml
[2024-05-20 09:51:47] -rw-r--r-- 2 boinc boinc 616157652 May 20 02:51 EVNT.38776190._000075.pool.root.1
[2024-05-20 09:51:47] -rw-r--r-- 2 boinc boinc     17537 May 20 02:51 start_atlas.sh
[2024-05-20 09:51:47] drwxrwx--x 2 boinc boinc      4096 May 20 02:51 shared
[2024-05-20 09:51:47] -rw-r--r-- 2 boinc boinc    480010 May 20 02:51 input.tar.gz
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc         0 May 20 02:51 boinc_lockfile
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc      2651 May 20 02:51 pandaJob.out
[2024-05-20 09:51:47] -rw------- 1 boinc boinc       424 May 20 02:51 setup.sh.local
[2024-05-20 09:51:47] -rw------- 1 boinc boinc   1013669 May 20 02:51 agis_schedconf.cvmfs.json
[2024-05-20 09:51:47] -rw------- 1 boinc boinc   1324701 May 20 02:51 cric_ddmendpoints.json
[2024-05-20 09:51:47] drwx------ 4 boinc boinc      4096 May 20 02:51 pilot3
[2024-05-20 09:51:47] -rw------- 1 boinc boinc 360300059 May 20 09:50 HITS.38921001._001322.pool.root.1
[2024-05-20 09:51:47] -rw------- 1 boinc boinc        95 May 20 09:50 pilot_heartbeat.json
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc       531 May 20 09:50 boinc_task_state.xml
[2024-05-20 09:51:47] -rw------- 1 boinc boinc      1049 May 20 09:51 memory_monitor_summary.json
[2024-05-20 09:51:47] -rw------- 1 boinc boinc         0 May 20 09:51 agis_ddmendpoints.agis.ALL.json
[2024-05-20 09:51:47] -rw------- 1 boinc boinc    464710 May 20 09:51 log.38921001._001322.job.log.tgz.1
[2024-05-20 09:51:47] -rw------- 1 boinc boinc      7762 May 20 09:51 heartbeat.json
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc      8192 May 20 09:51 boinc_mmap_file
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc        28 May 20 09:51 wrapper_checkpoint.txt
[2024-05-20 09:51:47] -rw------- 1 boinc boinc      4293 May 20 09:51 pilotlog.txt
[2024-05-20 09:51:47] -rw------- 1 boinc boinc   2869393 May 20 09:51 log.38921001._001322.job.log.1
[2024-05-20 09:51:47] -rw------- 1 boinc boinc       357 May 20 09:51 output.list
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc       620 May 20 09:51 runtime_log
[2024-05-20 09:51:47] -rw------- 1 boinc boinc   3348480 May 20 09:51 result.tar.gz
[2024-05-20 09:51:47] -rw------- 1 boinc boinc       658 May 20 09:51 vIVNDmEa3R5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmjuKKDmikSZIn.diag
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc     11410 May 20 09:51 runtime_log.err
[2024-05-20 09:51:47] -rw-r--r-- 1 boinc boinc     21330 May 20 09:51 stderr.txt
[2024-05-20 09:51:47] HITS file was successfully produced:
[2024-05-20 09:51:47] -rw------- 1 boinc boinc 360300059 May 20 09:50 shared/HITS.pool.root.1
[2024-05-20 09:51:47]  *** Contents of shared directory: ***
[2024-05-20 09:51:47] total 957348
[2024-05-20 09:51:47] -rw-r--r-- 2 boinc boinc 616157652 May 20 02:51 ATLAS.root_0
[2024-05-20 09:51:47] -rw-r--r-- 2 boinc boinc     17537 May 20 02:51 start_atlas.sh
[2024-05-20 09:51:47] -rw-r--r-- 2 boinc boinc    480010 May 20 02:51 input.tar.gz
[2024-05-20 09:51:47] -rw------- 1 boinc boinc 360300059 May 20 09:50 HITS.pool.root.1
[2024-05-20 09:51:47] -rw------- 1 boinc boinc   3348480 May 20 09:51 result.tar.gz
09:51:49 (977438): run_atlas exited; CPU time 97314.997348
09:51:49 (977438): called boinc_finish(0)

</stderr_txt>
]]>

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