Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:43:19 (22261): wrapper (7.7.26015): starting
05:43:19 (22261): wrapper: running run_atlas (--nthreads 8)
[2024-05-17 05:43:19] Arguments: --nthreads 8
[2024-05-17 05:43:19] Threads: 8
[2024-05-17 05:43:19] Checking for CVMFS
[2024-05-17 05:43:20] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 05:43:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 05:43:21] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 05:43:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 05:43:22] 2.11.2.0 60709 1466 78712 132835 3 263 17900837 18432001 17242 130560 0 9446319 98.988 21837919 51003 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-17 05:43:22] CVMFS is ok
[2024-05-17 05:43:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 05:43:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 05:43:22] Further information can be found at the LHC@home message board.
[2024-05-17 05:43:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 05:43:22] Checking for apptainer binary...
[2024-05-17 05:43:22] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 05:43:22] Running /usr/bin/apptainer --version
[2024-05-17 05:43:22] apptainer version 1.3.0-1.el7
[2024-05-17 05:43:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 05:43:36] c-210-40.aglt2.org
[2024-05-17 05:43:36] apptainer works
[2024-05-17 05:43:36] Set ATHENA_PROC_NUMBER=8
[2024-05-17 05:43:36] Set ATHENA_CORE_NUMBER=8
[2024-05-17 05:43:36] Starting ATLAS job with PandaID=6207707696
[2024-05-17 05:43:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 04:04:34]  *** The last 200 lines of the pilot log: ***
[2024-05-18 04:04:34] 2024-05-18 08:03:58,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:04:34] 2024-05-18 08:04:00,995 | INFO     | monitor loop #4766: job 0:6207707696 is in state 'finished'
[2024-05-18 04:04:34] 2024-05-18 08:04:00,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:04:34] 2024-05-18 08:04:03,502 | INFO     | monitor loop #4767: job 0:6207707696 is in state 'finished'
[2024-05-18 04:04:34] 2024-05-18 08:04:03,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:04:34] 2024-05-18 08:04:06,013 | INFO     | monitor loop #4768: job 0:6207707696 is in state 'finished'
[2024-05-18 04:04:34] 2024-05-18 08:04:06,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:04:34] 2024-05-18 08:04:08,520 | INFO     | monitor loop #4769: job 0:6207707696 is in state 'finished'
[2024-05-18 04:04:34] 2024-05-18 08:04:08,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:04:34] 2024-05-18 08:04:11,025 | INFO     | monitor loop #4770: job 0:6207707696 is in state 'finished'
[2024-05-18 04:04:34] 2024-05-18 08:04:11,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:04:34] 2024-05-18 08:04:13,533 | INFO     | monitor loop #4771: job 0:6207707696 is in state 'finished'
[2024-05-18 04:04:34] 2024-05-18 08:04:13,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 04:04:34] 2024-05-18 08:04:14,373 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-18 04:04:34] 2024-05-18 08:04:14,373 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6207707696/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 04:04:34] 2024-05-18 08:04:14,376 | INFO     | extracted standard info from prmon json
[2024-05-18 04:04:34] 2024-05-18 08:04:14,376 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 04:04:34] 2024-05-18 08:04:14,376 | WARNING  | GPU info not found in prmon json
[2024-05-18 04:04:34] 2024-05-18 08:04:14,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 04:04:34] 2024-05-18 08:04:14,376 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 04:04:34] 2024-05-18 08:04:14,408 | INFO     | fitting pss+swap vs Time
[2024-05-18 04:04:34] 2024-05-18 08:04:14,409 | INFO     | model: linear, x: [1715939350.0, 1715939411.0, 1715939472.0, 1715939533.0, 1715939594.0, 1715939655.0, 1715939716.0, 1715939777.0, 1715939838.0, 1715939899.0, 1715
[2024-05-18 04:04:34] 2024-05-18 08:04:14,409 | INFO     | sum of square deviations: 701886633393.755
[2024-05-18 04:04:34] 2024-05-18 08:04:14,482 | INFO     | sum of deviations: 3212034299100.898
[2024-05-18 04:04:34] 2024-05-18 08:04:14,487 | INFO     | mean x: 1715979366.519421
[2024-05-18 04:04:34] 2024-05-18 08:04:14,487 | INFO     | mean y: 2479063.5529322163
[2024-05-18 04:04:34] 2024-05-18 08:04:14,487 | INFO     | -- intersect: -7850334082.580494
[2024-05-18 04:04:34] 2024-05-18 08:04:14,487 | INFO     | intersect: -7850334082.580494
[2024-05-18 04:04:34] 2024-05-18 08:04:14,488 | INFO     | chi2: 21.171194189597333
[2024-05-18 04:04:34] 2024-05-18 08:04:14,493 | INFO     | model: linear, x: [1715939350.0, 1715939411.0, 1715939472.0, 1715939533.0, 1715939594.0, 1715939655.0, 1715939716.0, 1715939777.0, 1715939838.0, 1715939899.0, 1715
[2024-05-18 04:04:34] 2024-05-18 08:04:14,493 | INFO     | sum of square deviations: 693898728837.4004
[2024-05-18 04:04:34] 2024-05-18 08:04:14,537 | INFO     | sum of deviations: 3471203526688.8057
[2024-05-18 04:04:34] 2024-05-18 08:04:14,538 | INFO     | mean x: 1715979214.0214067
[2024-05-18 04:04:34] 2024-05-18 08:04:14,538 | INFO     | mean y: 2484003.470948012
[2024-05-18 04:04:34] 2024-05-18 08:04:14,539 | INFO     | -- intersect: -8581640526.36598
[2024-05-18 04:04:34] 2024-05-18 08:04:14,539 | INFO     | intersect: -8581640526.36598
[2024-05-18 04:04:34] 2024-05-18 08:04:14,557 | INFO     | chi2: 18.810087884037266
[2024-05-18 04:04:34] 2024-05-18 08:04:14,557 | INFO     | current chi2=18.810087884037266 (change=11.152447445407777 %)
[2024-05-18 04:04:34] 2024-05-18 08:04:14,557 | INFO     | right removable region: 1307
[2024-05-18 04:04:34] 2024-05-18 08:04:14,562 | INFO     | model: linear, x: [1715939655.0, 1715939716.0, 1715939777.0, 1715939838.0, 1715939899.0, 1715939960.0, 1715940021.0, 1715940082.0, 1715940143.0, 1715940204.0, 1715
[2024-05-18 04:04:34] 2024-05-18 08:04:14,563 | INFO     | sum of square deviations: 693898312817.3997
[2024-05-18 04:04:34] 2024-05-18 08:04:14,592 | INFO     | sum of deviations: 2763033684039.0444
[2024-05-18 04:04:34] 2024-05-18 08:04:14,592 | INFO     | mean x: 1715979519.0214067
[2024-05-18 04:04:34] 2024-05-18 08:04:14,592 | INFO     | mean y: 2487634.248470948
[2024-05-18 04:04:34] 2024-05-18 08:04:14,592 | INFO     | -- intersect: -6830371193.331568
[2024-05-18 04:04:34] 2024-05-18 08:04:14,592 | INFO     | intersect: -6830371193.331568
[2024-05-18 04:04:34] 2024-05-18 08:04:14,594 | INFO     | chi2: 16.79104626788132
[2024-05-18 04:04:34] 2024-05-18 08:04:14,594 | INFO     | current chi2=16.79104626788132 (change=20.689186837973647 %)
[2024-05-18 04:04:34] 2024-05-18 08:04:14,594 | INFO     | left removable region: 10
[2024-05-18 04:04:34] 2024-05-18 08:04:14,595 | INFO     | model: linear, x: [1715939960.0, 1715940021.0, 1715940082.0, 1715940143.0, 1715940204.0, 1715940265.0, 1715940326.0, 1715940387.0, 1715940448.0, 1715940509.0, 1715
[2024-05-18 04:04:34] 2024-05-18 08:04:14,595 | INFO     | sum of square deviations: 676538330317.3849
[2024-05-18 04:04:34] 2024-05-18 08:04:14,624 | INFO     | sum of deviations: 2688229469644.0093
[2024-05-18 04:04:34] 2024-05-18 08:04:14,624 | INFO     | mean x: 1715979488.5258288
[2024-05-18 04:04:34] 2024-05-18 08:04:14,624 | INFO     | mean y: 2498998.6861989205
[2024-05-18 04:04:34] 2024-05-18 08:04:14,624 | INFO     | -- intersect: -6815956695.015165
[2024-05-18 04:04:34] 2024-05-18 08:04:14,624 | INFO     | intersect: -6815956695.015165
[2024-05-18 04:04:34] 2024-05-18 08:04:14,625 | INFO     | chi2: 12.101878677400668
[2024-05-18 04:04:34] 2024-05-18 08:04:14,625 | INFO     | -- intersect: -6815956695.015165
[2024-05-18 04:04:34] 2024-05-18 08:04:14,625 | INFO     | current memory leak: 3.97 B/s (using 1297 data points, chi2=12.10)
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | ..............................
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | . Timing measurements:
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | . get job = 0 s
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | . initial setup = 3 s
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | . payload setup = 69 s
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | . stage-in = 0 s
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | . payload execution = 80103 s
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | . stage-out = 4 s
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | . log creation = 0 s
[2024-05-18 04:04:34] 2024-05-18 08:04:14,628 | INFO     | ..............................
[2024-05-18 04:04:34] 2024-05-18 08:04:14,865 | INFO     | 
[2024-05-18 04:04:34] 2024-05-18 08:04:14,869 | INFO     | job summary report
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | --------------------------------------------------
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | PanDA job id: 6207707696
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | task id: 38921007
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | errors: (none)
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | pilot state: finished 
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | transexitcode: 0
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | exeerrorcode: 0
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | exeerrordiag: 
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | exitcode: 0
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | exitmsg: OK
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | cpuconsumptiontime: 128071 s
[2024-05-18 04:04:34] 2024-05-18 08:04:14,870 | INFO     | nevents: 400
[2024-05-18 04:04:34] 2024-05-18 08:04:14,871 | INFO     | neventsw: 0
[2024-05-18 04:04:34] 2024-05-18 08:04:14,871 | INFO     | pid: 32046
[2024-05-18 04:04:34] 2024-05-18 08:04:14,871 | INFO     | pgrp: 32046
[2024-05-18 04:04:34] 2024-05-18 08:04:14,871 | INFO     | corecount: 8
[2024-05-18 04:04:34] 2024-05-18 08:04:14,871 | INFO     | event service: False
[2024-05-18 04:04:34] 2024-05-18 08:04:14,871 | INFO     | sizes: {0: 2392007, 1: 2392206, 12: 2392206, 22: 2392234, 33: 2392262, 42: 2392496, 44: 2392652, 80177: 2451419, 80183: 2460379, 80187: 2460435, 80238: 2460605}
[2024-05-18 04:04:34] 2024-05-18 08:04:14,871 | INFO     | --------------------------------------------------
[2024-05-18 04:04:34] 2024-05-18 08:04:14,871 | INFO     | 
[2024-05-18 04:04:34] 2024-05-18 08:04:14,871 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-05-18 04:04:34] 2024-05-18 08:04:15,229 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,229 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,229 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,229 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | job 6207707696 has completed (purged errors)
[2024-05-18 04:04:34] 2024-05-18 08:04:15,230 | INFO     | overall cleanup function is called
[2024-05-18 04:04:34] 2024-05-18 08:04:16,269 | INFO     | --- collectZombieJob: --- 10, [32046]
[2024-05-18 04:04:34] 2024-05-18 08:04:16,270 | INFO     | zombie collector waiting for pid 32046
[2024-05-18 04:04:34] 2024-05-18 08:04:16,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 04:04:34] 2024-05-18 08:04:17,277 | INFO     | collected zombie processes
[2024-05-18 04:04:34] 2024-05-18 08:04:17,278 | INFO     | will now attempt to kill all subprocesses of pid=32046
[2024-05-18 04:04:34] 2024-05-18 08:04:18,091 | INFO     | process IDs to be killed: [32046] (in reverse order)
[2024-05-18 04:04:34] 2024-05-18 08:04:18,871 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 04:04:34] 2024-05-18 08:04:18,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 04:04:34] 2024-05-18 08:04:18,893 | INFO     | did not find any defunct processes belonging to 32046
[2024-05-18 04:04:34] 2024-05-18 08:04:18,909 | INFO     | did not find any defunct processes belonging to 32046
[2024-05-18 04:04:34] 2024-05-18 08:04:18,909 | INFO     | ready for new job
[2024-05-18 04:04:34] 2024-05-18 08:04:18,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 04:04:34] 2024-05-18 08:04:18,917 | INFO     | *************************************
[2024-05-18 04:04:34] 2024-05-18 08:04:18,917 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 04:04:34] 2024-05-18 08:04:18,917 | INFO     | *************************************
[2024-05-18 04:04:34] 2024-05-18 08:04:18,917 | INFO     | 
[2024-05-18 04:04:34] 2024-05-18 08:04:18,920 | INFO     | architecture information:
[2024-05-18 04:04:34] 2024-05-18 08:04:18,921 | INFO     | executing command: cat /etc/os-release
[2024-05-18 04:04:34] 2024-05-18 08:04:19,020 | INFO     | cat /etc/os-release:
[2024-05-18 04:04:34] NAME="CentOS Linux"
[2024-05-18 04:04:34] VERSION="7 (Core)"
[2024-05-18 04:04:34] ID="centos"
[2024-05-18 04:04:34] ID_LIKE="rhel fedora"
[2024-05-18 04:04:34] VERSION_ID="7"
[2024-05-18 04:04:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 04:04:34] ANSI_COLOR="0;31"
[2024-05-18 04:04:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 04:04:34] HOME_URL="https://www.centos.org/"
[2024-05-18 04:04:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 04:04:34] 
[2024-05-18 04:04:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 04:04:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 04:04:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 04:04:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 04:04:34] 
[2024-05-18 04:04:34] 2024-05-18 08:04:19,027 | INFO     | *************************************
[2024-05-18 04:04:34] 2024-05-18 08:04:19,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-05-18 04:04:34] 2024-05-18 08:04:19,837 | INFO     | sufficient remaining disk space (67880615936 B)
[2024-05-18 04:04:34] 2024-05-18 08:04:19,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 04:04:34] 2024-05-18 08:04:19,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 04:04:34] 2024-05-18 08:04:19,838 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 04:04:34] 2024-05-18 08:04:19,838 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 04:04:34] 2024-05-18 08:04:19,838 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 04:04:34] 2024-05-18 08:04:19,838 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 04:04:34] 2024-05-18 08:04:19,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 04:04:34] 2024-05-18 08:04:19,839 | INFO     | aborting loop
[2024-05-18 04:04:34] 2024-05-18 08:04:19,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 04:04:34] 2024-05-18 08:04:19,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 04:04:34] 2024-05-18 08:04:20,295 | INFO     | all data control threads have been joined
[2024-05-18 04:04:34] 2024-05-18 08:04:20,843 | INFO     | [job] job monitor thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:20,853 | INFO     | [job] retrieve thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:20,887 | INFO     | [job] queue monitor thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:21,050 | INFO     | [data] copytool_in thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:21,064 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:21,069 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:21,228 | INFO     | all payload control threads have been joined
[2024-05-18 04:04:34] 2024-05-18 08:04:21,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 04:04:34] 2024-05-18 08:04:21,303 | INFO     | [data] control thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:21,308 | INFO     | all job control threads have been joined
[2024-05-18 04:04:34] 2024-05-18 08:04:22,042 | INFO     | [payload] validate_post thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:22,234 | INFO     | [payload] control thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:22,303 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:22,304 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:22,304 | INFO     | [job] validate thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:22,312 | INFO     | [job] control thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:22,404 | INFO     | [payload] failed_post thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:23,302 | INFO     | [data] copytool_out thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:23,847 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 04:04:34] 2024-05-18 08:04:25,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477923948352)>', '<ExcThread(monitor, started 140477357610752)>']
[2024-05-18 04:04:34] 2024-05-18 08:04:25,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 04:04:34] 2024-05-18 08:04:25,884 | INFO     | [monitor] control thread has ended
[2024-05-18 04:04:34] 2024-05-18 08:04:30,566 | INFO     | all workflow threads have been joined
[2024-05-18 04:04:34] 2024-05-18 08:04:30,567 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 04:04:34] 2024-05-18 08:04:30,570 | INFO     | traces error code: 0
[2024-05-18 04:04:34] 2024-05-18 08:04:30,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 04:04:34] 2024-05-18 08:04:31,546 [wrapper] ==== pilot stdout END ====
[2024-05-18 04:04:34] 2024-05-18 08:04:31,608 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 04:04:34] 2024-05-18 08:04:31,639 [wrapper] pilotpid: 52353
[2024-05-18 04:04:34] 2024-05-18 08:04:31,682 [wrapper] Pilot exit status: 0
[2024-05-18 04:04:34] 2024-05-18 08:04:31,960 [wrapper] pandaids: 6207707696
[2024-05-18 04:04:34] 2024-05-18 08:04:32,425 [wrapper] cleanup: SIGTERM to supervisor_pilot  4645 52354
[2024-05-18 04:04:34] 2024-05-18 08:04:32,489 [wrapper] Test setup, not cleaning
[2024-05-18 04:04:34] 2024-05-18 08:04:32,614 [wrapper] ==== wrapper stdout END ====
[2024-05-18 04:04:34] 2024-05-18 08:04:32,665 [wrapper] ==== wrapper stderr END ====
[2024-05-18 04:04:34] 2024-05-18 08:04:32,853 [wrapper] apfmon messages muted
[2024-05-18 04:04:34]  *** Error codes and diagnostics ***
[2024-05-18 04:04:34]     "exeErrorCode": 0,
[2024-05-18 04:04:34]     "exeErrorDiag": "",
[2024-05-18 04:04:34]     "pilotErrorCode": 0,
[2024-05-18 04:04:34]     "pilotErrorDiag": "",
[2024-05-18 04:04:34]  *** Listing of results directory ***
[2024-05-18 04:04:34] total 937888
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas    467845 May 16 22:46 pilot3.tar.gz
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas      5633 May 16 22:51 queuedata.json
[2024-05-18 04:04:34] -rwx------ 1 boincer umatlas     32251 May 16 22:52 runpilot2-wrapper.sh
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas       100 May 17 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 04:04:34] -rwxr-xr-x 1 boincer umatlas      7986 May 17 05:43 run_atlas
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas       105 May 17 05:43 job.xml
[2024-05-18 04:04:34] -rw-r--r-- 2 boincer umatlas 587637290 May 17 05:43 EVNT.38776201._000004.pool.root.1
[2024-05-18 04:04:34] -rw-r--r-- 2 boincer umatlas     17537 May 17 05:43 start_atlas.sh
[2024-05-18 04:04:34] drwxrwx--x 2 boincer umatlas      4096 May 17 05:43 shared
[2024-05-18 04:04:34] -rw-r--r-- 2 boincer umatlas    480005 May 17 05:43 input.tar.gz
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas         0 May 17 05:43 boinc_lockfile
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas      2623 May 17 05:43 pandaJob.out
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas       467 May 17 05:43 setup.sh.local
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas   1019400 May 17 05:45 agis_schedconf.cvmfs.json
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas   1324701 May 17 05:45 cric_ddmendpoints.json
[2024-05-18 04:04:34] drwx------ 4 boincer umatlas      4096 May 17 05:45 pilot3
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas 349308983 May 18 03:59 HITS.38921007._001286.pool.root.1
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas      6341 May 18 04:00 init_data.xml
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas       533 May 18 04:00 boinc_task_state.xml
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas      1093 May 18 04:03 memory_monitor_summary.json
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas         0 May 18 04:03 agis_ddmendpoints.agis.ALL.json
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas   1188078 May 18 04:03 log.38921007._001286.job.log.tgz.1
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas        95 May 18 04:03 pilot_heartbeat.json
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas      7778 May 18 04:04 heartbeat.json
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas      4334 May 18 04:04 pilotlog.txt
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas   8769948 May 18 04:04 log.38921007._001286.job.log.1
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas       357 May 18 04:04 output.list
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas       620 May 18 04:04 runtime_log
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas   9973760 May 18 04:04 result.tar.gz
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas     11405 May 18 04:04 runtime_log.err
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas       656 May 18 04:04 4uFNDm9s2R5n7Olcko1bjSoqABFKDmABFKDmOtvXDm9WZKDmPwt92n.diag
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas      8192 May 18 04:04 boinc_mmap_file
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas        29 May 18 04:04 wrapper_checkpoint.txt
[2024-05-18 04:04:34] -rw-r--r-- 1 boincer umatlas     21942 May 18 04:04 stderr.txt
[2024-05-18 04:04:34] HITS file was successfully produced:
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas 349308983 May 18 03:59 shared/HITS.pool.root.1
[2024-05-18 04:04:34]  *** Contents of shared directory: ***
[2024-05-18 04:04:34] total 925232
[2024-05-18 04:04:34] -rw-r--r-- 2 boincer umatlas 587637290 May 17 05:43 ATLAS.root_0
[2024-05-18 04:04:34] -rw-r--r-- 2 boincer umatlas     17537 May 17 05:43 start_atlas.sh
[2024-05-18 04:04:34] -rw-r--r-- 2 boincer umatlas    480005 May 17 05:43 input.tar.gz
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas 349308983 May 18 03:59 HITS.pool.root.1
[2024-05-18 04:04:34] -rw------- 1 boincer umatlas   9973760 May 18 04:04 result.tar.gz
04:04:36 (22261): run_atlas exited; CPU time 124194.061695
04:04:36 (22261): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN