Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:37:06 (2555249): wrapper (7.7.26015): starting
14:37:06 (2555249): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 14:37:06] Arguments: --nthreads 4
[2024-05-20 14:37:06] Threads: 4
[2024-05-20 14:37:06] Checking for CVMFS
[2024-05-20 14:37:06] No cvmfs_config command found, will try listing directly
[2024-05-20 14:37:06] CVMFS is ok
[2024-05-20 14:37:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 14:37:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 14:37:06] Further information can be found at the LHC@home message board.
[2024-05-20 14:37:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 14:37:06] Checking for apptainer binary...
[2024-05-20 14:37:06] which: no apptainer in ((null))
[2024-05-20 14:37:06] apptainer is not installed, using version from CVMFS
[2024-05-20 14:37:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 14:37:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2024-05-20 14:37:07] apptainer works
[2024-05-20 14:37:07] Set ATHENA_PROC_NUMBER=4
[2024-05-20 14:37:07] Set ATHENA_CORE_NUMBER=4
[2024-05-20 14:37:07] Starting ATLAS job with PandaID=6207696034
[2024-05-20 14:37:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-21 08:17:14]  *** The last 200 lines of the pilot log: ***
[2024-05-21 08:17:14] 2024-05-21 06:10:32,660 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-21 08:17:14] 2024-05-21 06:10:34,631 | INFO     | job 6207696034 has state=finished
[2024-05-21 08:17:14] 2024-05-21 06:10:34,631 | INFO     | preparing for final server update for job 6207696034 in state='finished'
[2024-05-21 08:17:14] 2024-05-21 06:10:34,632 | INFO     | this job has now completed (state=finished)
[2024-05-21 08:17:14] 2024-05-21 06:10:34,632 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-21 08:17:14] 2024-05-21 06:10:34,632 | INFO     | job 6207696034 has finished - writing final server update
[2024-05-21 08:17:14] 2024-05-21 06:10:34,632 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_361227/.job.ad'
[2024-05-21 08:17:14] 2024-05-21 06:10:34,632 | INFO     | total number of processed events: 1950 (read)
[2024-05-21 08:17:14] 2024-05-21 06:10:34,634 | INFO     | executing command: lscpu
[2024-05-21 08:17:14] 2024-05-21 06:10:34,665 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-05-21 08:17:14] 2024-05-21 06:10:34,665 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-21 08:17:14] 2024-05-21 06:10:34,687 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-21 08:17:14] 2024-05-21 06:10:34,789 | INFO     | monitor loop #4903: job 0:6207696034 is in state 'finished'
[2024-05-21 08:17:14] 2024-05-21 06:10:34,790 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-21 08:17:14] 2024-05-21 06:10:37,293 | INFO     | monitor loop #4904: job 0:6207696034 is in state 'finished'
[2024-05-21 08:17:14] 2024-05-21 06:10:37,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-21 08:17:14] 2024-05-21 06:10:38,464 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-21 08:17:14] 2024-05-21 06:10:38,465 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6207696034/memory_monitor_summary.json (trf name=prmon)
[2024-05-21 08:17:14] 2024-05-21 06:10:38,466 | INFO     | extracted standard info from prmon json
[2024-05-21 08:17:14] 2024-05-21 06:10:38,466 | INFO     | extracted standard memory fields from prmon json
[2024-05-21 08:17:14] 2024-05-21 06:10:38,466 | WARNING  | GPU info not found in prmon json
[2024-05-21 08:17:14] 2024-05-21 06:10:38,486 | INFO     | fitting pss+swap vs Time
[2024-05-21 08:17:14] 2024-05-21 06:10:38,487 | INFO     | model: linear, x: [1716208660.0, 1716208721.0, 1716208782.0, 1716208843.0, 1716208904.0, 1716208965.0, 1716209026.0, 1716209087.0, 1716209148.0, 1716209209.0, 1716
[2024-05-21 08:17:14] 2024-05-21 06:10:38,488 | INFO     | sum of square deviations: 344792083335.0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,502 | INFO     | sum of deviations: 1928481631810.5
[2024-05-21 08:17:14] 2024-05-21 06:10:38,503 | INFO     | mean x: 1716240227.5
[2024-05-21 08:17:14] 2024-05-21 06:10:38,503 | INFO     | mean y: 2624672.3445945946
[2024-05-21 08:17:14] 2024-05-21 06:10:38,503 | INFO     | -- intersect: -9596603136.17873
[2024-05-21 08:17:14] 2024-05-21 06:10:38,503 | INFO     | intersect: -9596603136.17873
[2024-05-21 08:17:14] 2024-05-21 06:10:38,504 | INFO     | chi2: 13.309688492423136
[2024-05-21 08:17:14] 2024-05-21 06:10:38,504 | INFO     | model: linear, x: [1716208660.0, 1716208721.0, 1716208782.0, 1716208843.0, 1716208904.0, 1716208965.0, 1716209026.0, 1716209087.0, 1716209148.0, 1716209209.0, 1716
[2024-05-21 08:17:14] 2024-05-21 06:10:38,505 | INFO     | sum of square deviations: 339823971580.0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,519 | INFO     | sum of deviations: 2216525969238.9995
[2024-05-21 08:17:14] 2024-05-21 06:10:38,519 | INFO     | mean x: 1716240075.0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,519 | INFO     | mean y: 2633514.7264791466
[2024-05-21 08:17:14] 2024-05-21 06:10:38,519 | INFO     | -- intersect: -11191664162.38911
[2024-05-21 08:17:14] 2024-05-21 06:10:38,519 | INFO     | intersect: -11191664162.38911
[2024-05-21 08:17:14] 2024-05-21 06:10:38,520 | INFO     | chi2: 10.76623037964181
[2024-05-21 08:17:14] 2024-05-21 06:10:38,520 | INFO     | current chi2=10.76623037964181 (change=19.10982450287437 %)
[2024-05-21 08:17:14] 2024-05-21 06:10:38,520 | INFO     | right removable region: 1030
[2024-05-21 08:17:14] 2024-05-21 06:10:38,521 | INFO     | model: linear, x: [1716208965.0, 1716209026.0, 1716209087.0, 1716209148.0, 1716209209.0, 1716209270.0, 1716209331.0, 1716209392.0, 1716209453.0, 1716209514.0, 1716
[2024-05-21 08:17:14] 2024-05-21 06:10:38,521 | INFO     | sum of square deviations: 339823971580.0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,535 | INFO     | sum of deviations: 1619345319319.0027
[2024-05-21 08:17:14] 2024-05-21 06:10:38,536 | INFO     | mean x: 1716240380.0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,536 | INFO     | mean y: 2634157.8545101844
[2024-05-21 08:17:14] 2024-05-21 06:10:38,536 | INFO     | -- intersect: -8175675963.287139
[2024-05-21 08:17:14] 2024-05-21 06:10:38,536 | INFO     | intersect: -8175675963.287139
[2024-05-21 08:17:14] 2024-05-21 06:10:38,537 | INFO     | chi2: 10.425918029608876
[2024-05-21 08:17:14] 2024-05-21 06:10:38,537 | INFO     | current chi2=10.425918029608876 (change=21.666701399179374 %)
[2024-05-21 08:17:14] 2024-05-21 06:10:38,537 | INFO     | left removable region: 10
[2024-05-21 08:17:14] 2024-05-21 06:10:38,537 | INFO     | model: linear, x: [1716209270.0, 1716209331.0, 1716209392.0, 1716209453.0, 1716209514.0, 1716209575.0, 1716209636.0, 1716209697.0, 1716209758.0, 1716209819.0, 1716
[2024-05-21 08:17:14] 2024-05-21 06:10:38,538 | INFO     | sum of square deviations: 329062597715.0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,552 | INFO     | sum of deviations: 1716247705720.5002
[2024-05-21 08:17:14] 2024-05-21 06:10:38,552 | INFO     | mean x: 1716240349.5
[2024-05-21 08:17:14] 2024-05-21 06:10:38,552 | INFO     | mean y: 2653107.3774509802
[2024-05-21 08:17:14] 2024-05-21 06:10:38,552 | INFO     | -- intersect: -8948511755.319605
[2024-05-21 08:17:14] 2024-05-21 06:10:38,552 | INFO     | intersect: -8948511755.319605
[2024-05-21 08:17:14] 2024-05-21 06:10:38,553 | INFO     | chi2: 5.399162980887063
[2024-05-21 08:17:14] 2024-05-21 06:10:38,553 | INFO     | -- intersect: -8948511755.319605
[2024-05-21 08:17:14] 2024-05-21 06:10:38,553 | INFO     | current memory leak: 5.22 B/s (using 1020 data points, chi2=5.40)
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | ..............................
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | . Timing measurements:
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | . get job = 0 s
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | . initial setup = 1 s
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | . payload setup = 7 s
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | . stage-in = 0 s
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | . payload execution = 63170 s
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | . stage-out = 2 s
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | . log creation = 0 s
[2024-05-21 08:17:14] 2024-05-21 06:10:38,554 | INFO     | ..............................
[2024-05-21 08:17:14] 2024-05-21 06:10:38,613 | INFO     | 
[2024-05-21 08:17:14] 2024-05-21 06:10:38,613 | INFO     | job summary report
[2024-05-21 08:17:14] 2024-05-21 06:10:38,613 | INFO     | --------------------------------------------------
[2024-05-21 08:17:14] 2024-05-21 06:10:38,613 | INFO     | PanDA job id: 6207696034
[2024-05-21 08:17:14] 2024-05-21 06:10:38,613 | INFO     | task id: 38734053
[2024-05-21 08:17:14] 2024-05-21 06:10:38,614 | INFO     | errors: (none)
[2024-05-21 08:17:14] 2024-05-21 06:10:38,614 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-21 08:17:14] 2024-05-21 06:10:38,614 | INFO     | pilot state: finished 
[2024-05-21 08:17:14] 2024-05-21 06:10:38,614 | INFO     | transexitcode: 0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,614 | INFO     | exeerrorcode: 0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,614 | INFO     | exeerrordiag: 
[2024-05-21 08:17:14] 2024-05-21 06:10:38,614 | INFO     | exitcode: 0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,614 | INFO     | exitmsg: OK
[2024-05-21 08:17:14] 2024-05-21 06:10:38,614 | INFO     | cpuconsumptiontime: 246655 s
[2024-05-21 08:17:14] 2024-05-21 06:10:38,615 | INFO     | nevents: 1950
[2024-05-21 08:17:14] 2024-05-21 06:10:38,615 | INFO     | neventsw: 0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,615 | INFO     | pid: 2566986
[2024-05-21 08:17:14] 2024-05-21 06:10:38,615 | INFO     | pgrp: 2566986
[2024-05-21 08:17:14] 2024-05-21 06:10:38,615 | INFO     | corecount: 4
[2024-05-21 08:17:14] 2024-05-21 06:10:38,615 | INFO     | event service: False
[2024-05-21 08:17:14] 2024-05-21 06:10:38,615 | INFO     | sizes: {0: 2392425, 1: 2392624, 4: 2392830, 12: 2392858, 63181: 2466857, 63184: 2476023, 63190: 2476189}
[2024-05-21 08:17:14] 2024-05-21 06:10:38,615 | INFO     | --------------------------------------------------
[2024-05-21 08:17:14] 2024-05-21 06:10:38,615 | INFO     | 
[2024-05-21 08:17:14] 2024-05-21 06:10:38,616 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-05-21 08:17:14] 2024-05-21 06:10:38,633 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,634 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,634 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,634 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,635 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,635 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,635 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,635 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,636 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-21 08:17:14] 2024-05-21 06:10:38,636 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,636 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-21 08:17:14] 2024-05-21 06:10:38,636 | INFO     | job 6207696034 has completed (purged errors)
[2024-05-21 08:17:14] 2024-05-21 06:10:38,636 | INFO     | overall cleanup function is called
[2024-05-21 08:17:14] 2024-05-21 06:10:39,655 | INFO     | --- collectZombieJob: --- 10, [2566986]
[2024-05-21 08:17:14] 2024-05-21 06:10:39,656 | INFO     | zombie collector waiting for pid 2566986
[2024-05-21 08:17:14] 2024-05-21 06:10:39,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-21 08:17:14] 2024-05-21 06:10:40,661 | INFO     | collected zombie processes
[2024-05-21 08:17:14] 2024-05-21 06:10:40,661 | INFO     | will now attempt to kill all subprocesses of pid=2566986
[2024-05-21 08:17:14] 2024-05-21 06:10:40,783 | INFO     | process IDs to be killed: [2566986] (in reverse order)
[2024-05-21 08:17:14] 2024-05-21 06:10:40,847 | WARNING  | found no corresponding commands to process id(s)
[2024-05-21 08:17:14] 2024-05-21 06:10:40,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-21 08:17:14] 2024-05-21 06:10:40,852 | INFO     | did not find any defunct processes belonging to 2566986
[2024-05-21 08:17:14] 2024-05-21 06:10:40,857 | INFO     | did not find any defunct processes belonging to 2566986
[2024-05-21 08:17:14] 2024-05-21 06:10:40,857 | INFO     | ready for new job
[2024-05-21 08:17:14] 2024-05-21 06:10:40,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-21 08:17:14] 2024-05-21 06:10:40,861 | INFO     | *************************************
[2024-05-21 08:17:14] 2024-05-21 06:10:40,861 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-21 08:17:14] 2024-05-21 06:10:40,861 | INFO     | *************************************
[2024-05-21 08:17:14] 2024-05-21 06:10:40,861 | INFO     | 
[2024-05-21 08:17:14] 2024-05-21 06:10:40,863 | INFO     | architecture information:
[2024-05-21 08:17:14] 2024-05-21 06:10:40,863 | INFO     | executing command: cat /etc/os-release
[2024-05-21 08:17:14] 2024-05-21 06:10:40,877 | INFO     | cat /etc/os-release:
[2024-05-21 08:17:14] NAME="CentOS Linux"
[2024-05-21 08:17:14] VERSION="7 (Core)"
[2024-05-21 08:17:14] ID="centos"
[2024-05-21 08:17:14] ID_LIKE="rhel fedora"
[2024-05-21 08:17:14] VERSION_ID="7"
[2024-05-21 08:17:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-21 08:17:14] ANSI_COLOR="0;31"
[2024-05-21 08:17:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-21 08:17:14] HOME_URL="https://www.centos.org/"
[2024-05-21 08:17:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-21 08:17:14] 
[2024-05-21 08:17:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-21 08:17:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-21 08:17:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-21 08:17:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-21 08:17:14] 
[2024-05-21 08:17:14] 2024-05-21 06:10:40,877 | INFO     | *************************************
[2024-05-21 08:17:14] 2024-05-21 06:10:41,380 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-05-21 08:17:14] 2024-05-21 06:10:41,398 | INFO     | sufficient remaining disk space (1623909728256 B)
[2024-05-21 08:17:14] 2024-05-21 06:10:41,399 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-21 08:17:14] 2024-05-21 06:10:41,399 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-21 08:17:14] 2024-05-21 06:10:41,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-21 08:17:14] 2024-05-21 06:10:41,400 | INFO     | aborting loop
[2024-05-21 08:17:14] 2024-05-21 06:10:41,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-21 08:17:14] 2024-05-21 06:10:41,866 | INFO     | found 0 job(s) in 20 queues
[2024-05-21 08:17:14] 2024-05-21 06:10:41,866 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-21 08:17:14] 2024-05-21 06:10:41,866 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-21 08:17:14] 2024-05-21 06:10:41,935 | INFO     | all job control threads have been joined
[2024-05-21 08:17:14] 2024-05-21 06:10:41,988 | INFO     | all data control threads have been joined
[2024-05-21 08:17:14] 2024-05-21 06:10:42,404 | INFO     | [job] retrieve thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:42,405 | INFO     | [job] job monitor thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:42,441 | INFO     | all payload control threads have been joined
[2024-05-21 08:17:14] 2024-05-21 06:10:42,623 | INFO     | [payload] failed_post thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:42,722 | INFO     | [job] validate thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:42,894 | INFO     | [payload] execute_payloads thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:42,930 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:42,941 | INFO     | [job] control thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:42,952 | INFO     | [payload] validate_pre thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:42,993 | INFO     | [data] control thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:43,255 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-21 08:17:14] 2024-05-21 06:10:43,405 | INFO     | [data] copytool_out thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:43,447 | INFO     | [payload] control thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:43,546 | INFO     | [data] copytool_in thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:43,620 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-21 08:17:14] 2024-05-21 06:10:43,766 | INFO     | [payload] validate_post thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:43,808 | INFO     | [job] create_data_payload thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:44,626 | INFO     | [job] queue monitor thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:47,261 | INFO     | [data] queue_monitor thread has finished
[2024-05-21 08:17:14] 2024-05-21 06:10:48,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47608374092864)>', '<ExcThread(monitor, started 47608543241984)>']
[2024-05-21 08:17:14] 2024-05-21 06:10:48,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-21 08:17:14] 2024-05-21 06:10:48,902 | INFO     | [monitor] control thread has ended
[2024-05-21 08:17:14] 2024-05-21 06:10:53,562 | INFO     | all workflow threads have been joined
[2024-05-21 08:17:14] 2024-05-21 06:10:53,562 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-21 08:17:14] 2024-05-21 06:10:53,563 | INFO     | traces error code: 0
[2024-05-21 08:17:14] 2024-05-21 06:10:53,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-21 08:17:14] 2024-05-21 06:10:53,630 [wrapper] ==== pilot stdout END ====
[2024-05-21 08:17:14] 2024-05-21 06:10:53,632 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-21 08:17:14] 2024-05-21 06:10:53,635 [wrapper] pilotpid: 2559471
[2024-05-21 08:17:14] 2024-05-21 06:10:53,638 [wrapper] Pilot exit status: 0
[2024-05-21 08:17:14] 2024-05-21 06:10:53,646 [wrapper] pandaids: 6207696034
[2024-05-21 08:17:14] 2024-05-21 06:10:53,707 [wrapper] cleanup: SIGTERM to supervisor_pilot 3785412 2559472
[2024-05-21 08:17:14] 2024-05-21 06:10:53,710 [wrapper] Test setup, not cleaning
[2024-05-21 08:17:14] 2024-05-21 06:10:53,712 [wrapper] ==== wrapper stdout END ====
[2024-05-21 08:17:14] 2024-05-21 06:10:53,714 [wrapper] ==== wrapper stderr END ====
[2024-05-21 08:17:14] 2024-05-21 06:10:53,719 [wrapper] apfmon messages muted
[2024-05-21 08:17:14]  *** Error codes and diagnostics ***
[2024-05-21 08:17:14]     "exeErrorCode": 0,
[2024-05-21 08:17:14]     "exeErrorDiag": "",
[2024-05-21 08:17:14]     "pilotErrorCode": 0,
[2024-05-21 08:17:14]     "pilotErrorDiag": "",
[2024-05-21 08:17:14]  *** Listing of results directory ***
[2024-05-21 08:17:14] total 1508056
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc     467845 May 17 04:30 pilot3.tar.gz
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc       5633 May 17 04:35 queuedata.json
[2024-05-21 08:17:14] -rwx------ 1 boinc boinc      32251 May 17 04:36 runpilot2-wrapper.sh
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc        100 May 20 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-21 08:17:14] -rwxr-xr-x 1 boinc boinc       7986 May 20 14:36 run_atlas
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc        105 May 20 14:36 job.xml
[2024-05-21 08:17:14] -rw-r--r-- 2 boinc boinc  327631615 May 20 14:37 EVNT.38734051._000018.pool.root.1
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc       6456 May 20 14:37 init_data.xml
[2024-05-21 08:17:14] drwxrwx--x 2 boinc boinc       4096 May 20 14:37 shared
[2024-05-21 08:17:14] -rw-r--r-- 2 boinc boinc     480165 May 20 14:37 input.tar.gz
[2024-05-21 08:17:14] -rw-r--r-- 2 boinc boinc      17537 May 20 14:37 start_atlas.sh
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc          0 May 20 14:37 boinc_lockfile
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc       2850 May 20 14:37 pandaJob.out
[2024-05-21 08:17:14] -rw------- 1 boinc boinc        424 May 20 14:37 setup.sh.local
[2024-05-21 08:17:14] -rw------- 1 boinc boinc    1013965 May 20 14:37 agis_schedconf.cvmfs.json
[2024-05-21 08:17:14] -rw------- 1 boinc boinc    1324701 May 20 14:37 cric_ddmendpoints.json
[2024-05-21 08:17:14] drwx------ 4 boinc boinc       4096 May 20 14:37 pilot3
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc        533 May 21 08:02 boinc_task_state.xml
[2024-05-21 08:17:14] -rw------- 1 boinc boinc         95 May 21 08:09 pilot_heartbeat.json
[2024-05-21 08:17:14] -rw------- 1 boinc boinc 1188285333 May 21 08:10 HITS.38734053._007481.pool.root.1
[2024-05-21 08:17:14] -rw------- 1 boinc boinc       1057 May 21 08:10 memory_monitor_summary.json
[2024-05-21 08:17:14] -rw------- 1 boinc boinc          0 May 21 08:10 agis_ddmendpoints.agis.ALL.json
[2024-05-21 08:17:14] -rw------- 1 boinc boinc    1948626 May 21 08:10 log.38734053._007481.job.log.tgz.1
[2024-05-21 08:17:14] -rw------- 1 boinc boinc      28007 May 21 08:10 heartbeat.json
[2024-05-21 08:17:14] -rw------- 1 boinc boinc       4222 May 21 08:10 pilotlog.txt
[2024-05-21 08:17:14] -rw------- 1 boinc boinc   10432642 May 21 08:10 log.38734053._007481.job.log.1
[2024-05-21 08:17:14] -rw------- 1 boinc boinc        353 May 21 08:10 output.list
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc        620 May 21 08:10 runtime_log
[2024-05-21 08:17:14] -rw------- 1 boinc boinc   12421120 May 21 08:10 result.tar.gz
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc      11410 May 21 08:10 runtime_log.err
[2024-05-21 08:17:14] -rw------- 1 boinc boinc        666 May 21 08:10 jjMKDmMd2R5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm9rKKDmTj3ZKn.diag
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc         29 May 21 08:16 wrapper_checkpoint.txt
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc       8192 May 21 08:17 boinc_mmap_file
[2024-05-21 08:17:14] -rw-r--r-- 1 boinc boinc      21681 May 21 08:17 stderr.txt
[2024-05-21 08:17:14] HITS file was successfully produced:
[2024-05-21 08:17:14] -rw------- 1 boinc boinc 1188285333 May 21 08:10 shared/HITS.pool.root.1
[2024-05-21 08:17:14]  *** Contents of shared directory: ***
[2024-05-21 08:17:14] total 1493020
[2024-05-21 08:17:14] -rw-r--r-- 2 boinc boinc  327631615 May 20 14:37 ATLAS.root_0
[2024-05-21 08:17:14] -rw-r--r-- 2 boinc boinc     480165 May 20 14:37 input.tar.gz
[2024-05-21 08:17:14] -rw-r--r-- 2 boinc boinc      17537 May 20 14:37 start_atlas.sh
[2024-05-21 08:17:14] -rw------- 1 boinc boinc 1188285333 May 21 08:10 HITS.pool.root.1
[2024-05-21 08:17:14] -rw------- 1 boinc boinc   12421120 May 21 08:10 result.tar.gz
08:17:16 (2555249): run_atlas exited; CPU time 243844.757995
08:17:16 (2555249): called boinc_finish(0)

</stderr_txt>
]]>

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