Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
17:13:08 (226235): wrapper (7.7.26015): starting
17:13:08 (226235): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 17:13:08] Arguments: --nthreads 12
[2024-05-17 17:13:08] Threads: 12
[2024-05-17 17:13:08] Checking for CVMFS
[2024-05-17 17:13:08] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 17:13:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 17:13:08] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 17:13:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 17:13:09] 2.9.2.0 165920 184074 125840 132859 3 60 23468639 45568000 4016 130560 0 621975744 99.781 414806032 14130 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 17:13:09] CVMFS is ok
[2024-05-17 17:13:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 17:13:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 17:13:09] Further information can be found at the LHC@home message board.
[2024-05-17 17:13:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 17:13:09] Checking for apptainer binary...
[2024-05-17 17:13:09] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 17:13:09] Running /usr/bin/apptainer --version
[2024-05-17 17:13:09] apptainer version 1.1.8-1.el7
[2024-05-17 17:13:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 17:13:10] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0038.triumf.lcg
[2024-05-17 17:13:10] apptainer works
[2024-05-17 17:13:10] Set ATHENA_PROC_NUMBER=12
[2024-05-17 17:13:10] Set ATHENA_CORE_NUMBER=12
[2024-05-17 17:13:10] Starting ATLAS job with PandaID=6207691371
[2024-05-17 17:13:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 18:37:21]  *** The last 200 lines of the pilot log: ***
[2024-05-17 18:37:21]  filetype=log
[2024-05-17 18:37:21]  guid=ed2e930b-9db7-4a97-9920-62fe24b42d60
[2024-05-17 18:37:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 18:37:21]  is_tar=False
[2024-05-17 18:37:21]  lfn=log.38920982._003020.job.log.tgz.1
[2024-05-17 18:37:21]  mtime=0
[2024-05-17 18:37:21]  protocol_id=None
[2024-05-17 18:37:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 18:37:21]  replicas=None
[2024-05-17 18:37:21]  scope=mc23_13p6TeV
[2024-05-17 18:37:21]  status=None
[2024-05-17 18:37:21]  status_code=0
[2024-05-17 18:37:21]  storage_token=
[2024-05-17 18:37:21]  surl=/home/boinc/slots/0/PanDA_Pilot-6207691371/log.38920982._003020.job.log.tgz.1
[2024-05-17 18:37:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/c9/log.38920982._003020.job.log.tgz.1
[2024-05-17 18:37:21]  workdir=None
[2024-05-17 18:37:21] ]
[2024-05-17 18:37:21] 2024-05-18 01:36:53,191 | INFO     | transferring file log.38920982._003020.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207691371/log.38920982._003020.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 18:37:21] 2024-05-18 01:36:53,191 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207691371/log.38920982._003020.job.log.tgz.1 /home/boinc/slots/0/log.38920982._003020.job.log.t
[2024-05-17 18:37:21] 2024-05-18 01:36:53,248 | INFO     | adding to output.list: log.38920982._003020.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/c9/log.38920982._003020.job.log.tg
[2024-05-17 18:37:21] 2024-05-18 01:36:53,248 | INFO     | summary of transferred files:
[2024-05-17 18:37:21] 2024-05-18 01:36:53,248 | INFO     |  -- lfn=log.38920982._003020.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 18:37:21] 2024-05-18 01:36:53,249 | INFO     | stage-out finished correctly
[2024-05-17 18:37:21] 2024-05-18 01:36:55,090 | INFO     | monitor loop #395: job 0:6207691371 is in state 'finished'
[2024-05-17 18:37:21] 2024-05-18 01:36:55,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 18:37:21] 2024-05-18 01:36:55,407 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 18:37:21] 2024-05-18 01:36:55,814 | INFO     | job 6207691371 has state=finished
[2024-05-17 18:37:21] 2024-05-18 01:36:55,814 | INFO     | preparing for final server update for job 6207691371 in state='finished'
[2024-05-17 18:37:21] 2024-05-18 01:36:55,815 | INFO     | this job has now completed (state=finished)
[2024-05-17 18:37:21] 2024-05-18 01:36:55,815 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 18:37:21] 2024-05-18 01:36:55,815 | INFO     | job 6207691371 has finished - writing final server update
[2024-05-17 18:37:21] 2024-05-18 01:36:55,816 | INFO     | total number of processed events: 400 (read)
[2024-05-17 18:37:21] 2024-05-18 01:36:55,822 | INFO     | executing command: lscpu
[2024-05-17 18:37:21] 2024-05-18 01:36:55,908 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 18:37:21] 2024-05-18 01:36:55,909 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 18:37:21] 2024-05-18 01:36:56,003 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 18:37:21] 2024-05-18 01:36:57,594 | INFO     | monitor loop #396: job 0:6207691371 is in state 'finished'
[2024-05-17 18:37:21] 2024-05-18 01:36:57,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 18:37:21] 2024-05-18 01:37:00,100 | INFO     | monitor loop #397: job 0:6207691371 is in state 'finished'
[2024-05-17 18:37:21] 2024-05-18 01:37:00,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 18:37:21] 2024-05-18 01:37:02,604 | INFO     | monitor loop #398: job 0:6207691371 is in state 'finished'
[2024-05-17 18:37:21] 2024-05-18 01:37:02,605 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 18:37:21] 2024-05-18 01:37:04,034 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 18:37:21] 2024-05-18 01:37:04,035 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207691371/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 18:37:21] 2024-05-18 01:37:04,036 | INFO     | extracted standard info from prmon json
[2024-05-17 18:37:21] 2024-05-18 01:37:04,036 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 18:37:21] 2024-05-18 01:37:04,036 | WARNING  | GPU info not found in prmon json
[2024-05-17 18:37:21] 2024-05-18 01:37:04,037 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 18:37:21] 2024-05-18 01:37:04,037 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 18:37:21] 2024-05-18 01:37:04,039 | INFO     | fitting pss+swap vs Time
[2024-05-17 18:37:21] 2024-05-18 01:37:04,039 | INFO     | model: linear, x: [1715991555.0, 1715991616.0, 1715991677.0, 1715991738.0, 1715991799.0, 1715991860.0, 1715991921.0, 1715991982.0, 1715992043.0, 1715992104.0, 1715
[2024-05-17 18:37:21] 2024-05-18 01:37:04,039 | INFO     | sum of square deviations: 130793150.0
[2024-05-17 18:37:21] 2024-05-18 01:37:04,039 | INFO     | sum of deviations: 32192234672.0
[2024-05-17 18:37:21] 2024-05-18 01:37:04,040 | INFO     | mean x: 1715993812.0
[2024-05-17 18:37:21] 2024-05-18 01:37:04,040 | INFO     | mean y: 2609747.24
[2024-05-17 18:37:21] 2024-05-18 01:37:04,040 | INFO     | -- intersect: -422356477801.3346
[2024-05-17 18:37:21] 2024-05-18 01:37:04,040 | INFO     | intersect: -422356477801.3346
[2024-05-17 18:37:21] 2024-05-18 01:37:04,040 | INFO     | chi2: 3.1879913130864455
[2024-05-17 18:37:21] 2024-05-18 01:37:04,040 | INFO     | -- intersect: -422356477801.3346
[2024-05-17 18:37:21] 2024-05-18 01:37:04,040 | INFO     | current memory leak: 246.13 B/s (using 75 data points, chi2=3.19)
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | ..............................
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | . Timing measurements:
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | . get job = 0 s
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | . initial setup = 2 s
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | . payload setup = 10 s
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | . stage-in = 0 s
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | . payload execution = 4968 s
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | . stage-out = 1 s
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | . log creation = 0 s
[2024-05-17 18:37:21] 2024-05-18 01:37:04,041 | INFO     | ..............................
[2024-05-17 18:37:21] 2024-05-18 01:37:04,109 | INFO     | 
[2024-05-17 18:37:21] 2024-05-18 01:37:04,110 | INFO     | job summary report
[2024-05-17 18:37:21] 2024-05-18 01:37:04,110 | INFO     | --------------------------------------------------
[2024-05-17 18:37:21] 2024-05-18 01:37:04,110 | INFO     | PanDA job id: 6207691371
[2024-05-17 18:37:21] 2024-05-18 01:37:04,110 | INFO     | task id: 38920982
[2024-05-17 18:37:21] 2024-05-18 01:37:04,110 | INFO     | errors: (none)
[2024-05-17 18:37:21] 2024-05-18 01:37:04,111 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 18:37:21] 2024-05-18 01:37:04,111 | INFO     | pilot state: finished 
[2024-05-17 18:37:21] 2024-05-18 01:37:04,111 | INFO     | transexitcode: 0
[2024-05-17 18:37:21] 2024-05-18 01:37:04,111 | INFO     | exeerrorcode: 0
[2024-05-17 18:37:21] 2024-05-18 01:37:04,111 | INFO     | exeerrordiag: 
[2024-05-17 18:37:21] 2024-05-18 01:37:04,111 | INFO     | exitcode: 0
[2024-05-17 18:37:21] 2024-05-18 01:37:04,111 | INFO     | exitmsg: OK
[2024-05-17 18:37:21] 2024-05-18 01:37:04,111 | INFO     | cpuconsumptiontime: 47208 s
[2024-05-17 18:37:21] 2024-05-18 01:37:04,111 | INFO     | nevents: 400
[2024-05-17 18:37:21] 2024-05-18 01:37:04,112 | INFO     | neventsw: 0
[2024-05-17 18:37:21] 2024-05-18 01:37:04,112 | INFO     | pid: 257565
[2024-05-17 18:37:21] 2024-05-18 01:37:04,112 | INFO     | pgrp: 257565
[2024-05-17 18:37:21] 2024-05-18 01:37:04,112 | INFO     | corecount: 12
[2024-05-17 18:37:21] 2024-05-18 01:37:04,112 | INFO     | event service: False
[2024-05-17 18:37:21] 2024-05-18 01:37:04,112 | INFO     | sizes: {0: 2392232, 9: 2392438, 11: 2392466, 4982: 2418731, 4984: 2427685, 4986: 2427741, 4995: 2428039}
[2024-05-17 18:37:21] 2024-05-18 01:37:04,112 | INFO     | --------------------------------------------------
[2024-05-17 18:37:21] 2024-05-18 01:37:04,112 | INFO     | 
[2024-05-17 18:37:21] 2024-05-18 01:37:04,112 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 18:37:21] 2024-05-18 01:37:04,166 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,167 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,167 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,167 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,167 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,167 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,167 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,167 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,167 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,167 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,168 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 18:37:21] 2024-05-18 01:37:04,169 | INFO     | job 6207691371 has completed (purged errors)
[2024-05-17 18:37:21] 2024-05-18 01:37:04,169 | INFO     | overall cleanup function is called
[2024-05-17 18:37:21] 2024-05-18 01:37:05,178 | INFO     | --- collectZombieJob: --- 10, [257565]
[2024-05-17 18:37:21] 2024-05-18 01:37:05,178 | INFO     | zombie collector waiting for pid 257565
[2024-05-17 18:37:21] 2024-05-18 01:37:05,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 18:37:21] 2024-05-18 01:37:06,183 | INFO     | collected zombie processes
[2024-05-17 18:37:21] 2024-05-18 01:37:06,184 | INFO     | will now attempt to kill all subprocesses of pid=257565
[2024-05-17 18:37:21] 2024-05-18 01:37:06,316 | INFO     | process IDs to be killed: [257565] (in reverse order)
[2024-05-17 18:37:21] 2024-05-18 01:37:06,458 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 18:37:21] 2024-05-18 01:37:06,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 18:37:21] 2024-05-18 01:37:06,467 | INFO     | did not find any defunct processes belonging to 257565
[2024-05-17 18:37:21] 2024-05-18 01:37:06,474 | INFO     | did not find any defunct processes belonging to 257565
[2024-05-17 18:37:21] 2024-05-18 01:37:06,474 | INFO     | ready for new job
[2024-05-17 18:37:21] 2024-05-18 01:37:06,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 18:37:21] 2024-05-18 01:37:06,477 | INFO     | *************************************
[2024-05-17 18:37:21] 2024-05-18 01:37:06,477 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 18:37:21] 2024-05-18 01:37:06,477 | INFO     | *************************************
[2024-05-17 18:37:21] 2024-05-18 01:37:06,477 | INFO     | 
[2024-05-17 18:37:21] 2024-05-18 01:37:06,481 | INFO     | architecture information:
[2024-05-17 18:37:21] 2024-05-18 01:37:06,482 | INFO     | executing command: cat /etc/os-release
[2024-05-17 18:37:21] 2024-05-18 01:37:06,525 | INFO     | cat /etc/os-release:
[2024-05-17 18:37:21] NAME="CentOS Linux"
[2024-05-17 18:37:21] VERSION="7 (Core)"
[2024-05-17 18:37:21] ID="centos"
[2024-05-17 18:37:21] ID_LIKE="rhel fedora"
[2024-05-17 18:37:21] VERSION_ID="7"
[2024-05-17 18:37:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 18:37:21] ANSI_COLOR="0;31"
[2024-05-17 18:37:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 18:37:21] HOME_URL="https://www.centos.org/"
[2024-05-17 18:37:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 18:37:21] 
[2024-05-17 18:37:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 18:37:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 18:37:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 18:37:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 18:37:21] 
[2024-05-17 18:37:21] 2024-05-18 01:37:06,526 | INFO     | *************************************
[2024-05-17 18:37:21] 2024-05-18 01:37:07,029 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 18:37:21] 2024-05-18 01:37:07,076 | INFO     | sufficient remaining disk space (2125722550272 B)
[2024-05-17 18:37:21] 2024-05-18 01:37:07,076 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 18:37:21] 2024-05-18 01:37:07,076 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 18:37:21] 2024-05-18 01:37:07,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 18:37:21] 2024-05-18 01:37:07,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 18:37:21] 2024-05-18 01:37:07,078 | INFO     | aborting loop
[2024-05-17 18:37:21] 2024-05-18 01:37:07,597 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 18:37:21] 2024-05-18 01:37:07,598 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 18:37:21] 2024-05-18 01:37:07,598 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 18:37:21] 2024-05-18 01:37:07,625 | INFO     | all payload control threads have been joined
[2024-05-17 18:37:21] 2024-05-18 01:37:07,827 | INFO     | all data control threads have been joined
[2024-05-17 18:37:21] 2024-05-18 01:37:08,082 | INFO     | [job] retrieve thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:08,084 | INFO     | [job] job monitor thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:08,085 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:08,109 | INFO     | all job control threads have been joined
[2024-05-17 18:37:21] 2024-05-18 01:37:08,203 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:08,553 | INFO     | [payload] validate_post thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:08,634 | INFO     | [payload] control thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:08,675 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:08,833 | INFO     | [data] control thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:09,084 | INFO     | [data] copytool_out thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:09,115 | INFO     | [job] control thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:09,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 18:37:21] 2024-05-18 01:37:09,220 | INFO     | [job] validate thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:09,273 | INFO     | [data] copytool_in thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:09,452 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:09,644 | INFO     | [payload] failed_post thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:10,125 | INFO     | [job] queue monitor thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:10,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 18:37:21] 2024-05-18 01:37:14,526 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 18:37:21] 2024-05-18 01:37:15,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451812820800)>', '<ExcThread(monitor, started 140451260655360)>']
[2024-05-17 18:37:21] 2024-05-18 01:37:15,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 18:37:21] 2024-05-18 01:37:15,639 | INFO     | [monitor] control thread has ended
[2024-05-17 18:37:21] 2024-05-18 01:37:20,312 | INFO     | all workflow threads have been joined
[2024-05-17 18:37:21] 2024-05-18 01:37:20,313 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 18:37:21] 2024-05-18 01:37:20,313 | INFO     | traces error code: 0
[2024-05-17 18:37:21] 2024-05-18 01:37:20,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 18:37:21] 2024-05-18 01:37:20,404 [wrapper] ==== pilot stdout END ====
[2024-05-17 18:37:21] 2024-05-18 01:37:20,414 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 18:37:21] 2024-05-18 01:37:20,423 [wrapper] pilotpid: 238810
[2024-05-17 18:37:21] 2024-05-18 01:37:20,436 [wrapper] Pilot exit status: 0
[2024-05-17 18:37:21] 2024-05-18 01:37:20,478 [wrapper] pandaids: 6207691371
[2024-05-17 18:37:21] 2024-05-18 01:37:20,575 [wrapper] cleanup: SIGTERM to supervisor_pilot 223182 238811
[2024-05-17 18:37:21] 2024-05-18 01:37:20,589 [wrapper] Test setup, not cleaning
[2024-05-17 18:37:21] 2024-05-18 01:37:20,598 [wrapper] ==== wrapper stdout END ====
[2024-05-17 18:37:21] 2024-05-18 01:37:20,607 [wrapper] ==== wrapper stderr END ====
[2024-05-17 18:37:21] 2024-05-18 01:37:20,627 [wrapper] apfmon messages muted
[2024-05-17 18:37:21]  *** Error codes and diagnostics ***
[2024-05-17 18:37:21]     "exeErrorCode": 0,
[2024-05-17 18:37:21]     "exeErrorDiag": "",
[2024-05-17 18:37:21]     "pilotErrorCode": 0,
[2024-05-17 18:37:21]     "pilotErrorDiag": "",
[2024-05-17 18:37:21]  *** Listing of results directory ***
[2024-05-17 18:37:21] total 921012
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc    467845 May 16 18:57 pilot3.tar.gz
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc      5633 May 16 19:18 queuedata.json
[2024-05-17 18:37:21] -rwx------ 1 boinc boinc     32251 May 16 19:19 runpilot2-wrapper.sh
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc       100 May 17 17:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 18:37:21] -rwxr-xr-x 1 boinc boinc      7986 May 17 17:13 run_atlas
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc       105 May 17 17:13 job.xml
[2024-05-17 18:37:21] -rw-r--r-- 2 boinc boinc     17537 May 17 17:13 start_atlas.sh
[2024-05-17 18:37:21] drwxrwx--x 2 boinc boinc      4096 May 17 17:13 shared
[2024-05-17 18:37:21] -rw-r--r-- 2 boinc boinc    480007 May 17 17:13 input.tar.gz
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc      6628 May 17 17:13 init_data.xml
[2024-05-17 18:37:21] -rw-r--r-- 2 boinc boinc 629024638 May 17 17:13 EVNT.38776160._000054.pool.root.1
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc         0 May 17 17:13 boinc_lockfile
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc      2625 May 17 17:13 pandaJob.out
[2024-05-17 18:37:21] -rw------- 1 boinc boinc       424 May 17 17:13 setup.sh.local
[2024-05-17 18:37:21] -rw------- 1 boinc boinc   1019081 May 17 17:13 agis_schedconf.cvmfs.json
[2024-05-17 18:37:21] -rw------- 1 boinc boinc         0 May 17 17:13 agis_ddmendpoints.agis.ALL.json
[2024-05-17 18:37:21] -rw------- 1 boinc boinc   1324701 May 17 17:13 cric_ddmendpoints.json
[2024-05-17 18:37:21] drwx------ 4 boinc boinc      4096 May 17 17:13 pilot3
[2024-05-17 18:37:21] -rw------- 1 boinc boinc 308811583 May 17 18:36 HITS.38920982._003020.pool.root.1
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc       530 May 17 18:36 boinc_task_state.xml
[2024-05-17 18:37:21] -rw------- 1 boinc boinc        95 May 17 18:36 pilot_heartbeat.json
[2024-05-17 18:37:21] -rw------- 1 boinc boinc      1045 May 17 18:36 memory_monitor_summary.json
[2024-05-17 18:37:21] -rw------- 1 boinc boinc    379278 May 17 18:36 log.38920982._003020.job.log.tgz.1
[2024-05-17 18:37:21] -rw------- 1 boinc boinc      7757 May 17 18:37 heartbeat.json
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc        27 May 17 18:37 wrapper_checkpoint.txt
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc      8192 May 17 18:37 boinc_mmap_file
[2024-05-17 18:37:21] -rw------- 1 boinc boinc      4210 May 17 18:37 pilotlog.txt
[2024-05-17 18:37:21] -rw------- 1 boinc boinc    493113 May 17 18:37 log.38920982._003020.job.log.1
[2024-05-17 18:37:21] -rw------- 1 boinc boinc       357 May 17 18:37 output.list
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc       620 May 17 18:37 runtime_log
[2024-05-17 18:37:21] -rw------- 1 boinc boinc    890880 May 17 18:37 result.tar.gz
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc     11286 May 17 18:37 runtime_log.err
[2024-05-17 18:37:21] -rw------- 1 boinc boinc       655 May 17 18:37 bxMODm8M2R5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmdrKKDmo54jTn.diag
[2024-05-17 18:37:21] -rw-r--r-- 1 boinc boinc     21724 May 17 18:37 stderr.txt
[2024-05-17 18:37:21] HITS file was successfully produced:
[2024-05-17 18:37:21] -rw------- 1 boinc boinc 308811583 May 17 18:36 shared/HITS.pool.root.1
[2024-05-17 18:37:21]  *** Contents of shared directory: ***
[2024-05-17 18:37:21] total 917232
[2024-05-17 18:37:21] -rw-r--r-- 2 boinc boinc     17537 May 17 17:13 start_atlas.sh
[2024-05-17 18:37:21] -rw-r--r-- 2 boinc boinc    480007 May 17 17:13 input.tar.gz
[2024-05-17 18:37:21] -rw-r--r-- 2 boinc boinc 629024638 May 17 17:13 ATLAS.root_0
[2024-05-17 18:37:21] -rw------- 1 boinc boinc 308811583 May 17 18:36 HITS.pool.root.1
[2024-05-17 18:37:21] -rw------- 1 boinc boinc    890880 May 17 18:37 result.tar.gz
18:37:22 (226235): run_atlas exited; CPU time 47048.794696
18:37:22 (226235): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN