Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:22:23 (248556): wrapper (7.7.26015): starting
05:22:23 (248556): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 05:22:23] Arguments: --nthreads 12
[2024-05-17 05:22:23] Threads: 12
[2024-05-17 05:22:23] Checking for CVMFS
[2024-05-17 05:22:23] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 05:22:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 05:22:23] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 05:22:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 05:22:23] 2.10.1.0 250101 183472 162192 132841 3 79 23771226 45568000 11360 130560 0 1130698638 99.780 659746340 18821 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 05:22:23] CVMFS is ok
[2024-05-17 05:22:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 05:22:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 05:22:23] Further information can be found at the LHC@home message board.
[2024-05-17 05:22:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 05:22:23] Checking for apptainer binary...
[2024-05-17 05:22:23] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 05:22:23] Running /usr/bin/apptainer --version
[2024-05-17 05:22:23] apptainer version 1.1.8-1.el7
[2024-05-17 05:22:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 05:22:24] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0168.triumf.lcg
[2024-05-17 05:22:24] apptainer works
[2024-05-17 05:22:24] Set ATHENA_PROC_NUMBER=12
[2024-05-17 05:22:24] Set ATHENA_CORE_NUMBER=12
[2024-05-17 05:22:24] Starting ATLAS job with PandaID=6207676799
[2024-05-17 05:22:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 08:01:40]  *** The last 200 lines of the pilot log: ***
[2024-05-17 08:01:40] 2024-05-17 15:01:25,254 | INFO     | chi2: 6.33188974325447
[2024-05-17 08:01:40] 2024-05-17 15:01:25,255 | INFO     | model: linear, x: [1715948578.0, 1715948639.0, 1715948700.0, 1715948761.0, 1715948822.0, 1715948883.0, 1715948944.0, 1715949005.0, 1715949066.0, 1715949127.0, 1715
[2024-05-17 08:01:40] 2024-05-17 15:01:25,255 | INFO     | sum of square deviations: 1067554900.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,256 | INFO     | sum of deviations: 78092343533.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,256 | INFO     | mean x: 1715953153.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,256 | INFO     | mean y: 2686100.2450331124
[2024-05-17 08:01:40] 2024-05-17 15:01:25,256 | INFO     | -- intersect: -125520416374.96306
[2024-05-17 08:01:40] 2024-05-17 15:01:25,256 | INFO     | intersect: -125520416374.96306
[2024-05-17 08:01:40] 2024-05-17 15:01:25,256 | INFO     | chi2: 5.567967374782428
[2024-05-17 08:01:40] 2024-05-17 15:01:25,257 | INFO     | current chi2=5.567967374782428 (change=12.064682100408792 %)
[2024-05-17 08:01:40] 2024-05-17 15:01:25,257 | INFO     | right removable region: 150
[2024-05-17 08:01:40] 2024-05-17 15:01:25,257 | INFO     | model: linear, x: [1715948883.0, 1715948944.0, 1715949005.0, 1715949066.0, 1715949127.0, 1715949188.0, 1715949249.0, 1715949310.0, 1715949371.0, 1715949432.0, 1715
[2024-05-17 08:01:40] 2024-05-17 15:01:25,257 | INFO     | sum of square deviations: 1067554900.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,258 | INFO     | sum of deviations: 24697415260.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,258 | INFO     | mean x: 1715953458.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,258 | INFO     | mean y: 2734555.4105960266
[2024-05-17 08:01:40] 2024-05-17 15:01:25,258 | INFO     | -- intersect: -39695097489.62893
[2024-05-17 08:01:40] 2024-05-17 15:01:25,258 | INFO     | intersect: -39695097489.62893
[2024-05-17 08:01:40] 2024-05-17 15:01:25,259 | INFO     | chi2: 3.4760215951681466
[2024-05-17 08:01:40] 2024-05-17 15:01:25,259 | INFO     | current chi2=3.4760215951681466 (change=45.10293551982259 %)
[2024-05-17 08:01:40] 2024-05-17 15:01:25,259 | INFO     | model: linear, x: [1715949188.0, 1715949249.0, 1715949310.0, 1715949371.0, 1715949432.0, 1715949493.0, 1715949554.0, 1715949615.0, 1715949676.0, 1715949737.0, 1715
[2024-05-17 08:01:40] 2024-05-17 15:01:25,260 | INFO     | sum of square deviations: 964976232.5
[2024-05-17 08:01:40] 2024-05-17 15:01:25,260 | INFO     | sum of deviations: -9294725580.5
[2024-05-17 08:01:40] 2024-05-17 15:01:25,261 | INFO     | mean x: 1715953610.5
[2024-05-17 08:01:40] 2024-05-17 15:01:25,261 | INFO     | mean y: 2785102.2397260275
[2024-05-17 08:01:40] 2024-05-17 15:01:25,261 | INFO     | -- intersect: 16530982773.12452
[2024-05-17 08:01:40] 2024-05-17 15:01:25,261 | INFO     | intersect: 16530982773.12452
[2024-05-17 08:01:40] 2024-05-17 15:01:25,261 | INFO     | chi2: 1.8490685692688955
[2024-05-17 08:01:40] 2024-05-17 15:01:25,261 | INFO     | current chi2=1.8490685692688955 (change=46.8050321712846 %)
[2024-05-17 08:01:40] 2024-05-17 15:01:25,262 | INFO     | model: linear, x: [1715949493.0, 1715949554.0, 1715949615.0, 1715949676.0, 1715949737.0, 1715949798.0, 1715949859.0, 1715949920.0, 1715949981.0, 1715950042.0, 1715
[2024-05-17 08:01:40] 2024-05-17 15:01:25,262 | INFO     | sum of square deviations: 869188390.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,263 | INFO     | sum of deviations: -30789180809.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,263 | INFO     | mean x: 1715953763.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,263 | INFO     | mean y: 2819025.0212765955
[2024-05-17 08:01:40] 2024-05-17 15:01:25,263 | INFO     | -- intersect: 60786892163.516525
[2024-05-17 08:01:40] 2024-05-17 15:01:25,263 | INFO     | intersect: 60786892163.516525
[2024-05-17 08:01:40] 2024-05-17 15:01:25,263 | INFO     | chi2: 1.0184306016225437
[2024-05-17 08:01:40] 2024-05-17 15:01:25,263 | INFO     | current chi2=1.0184306016225437 (change=44.92196673781429 %)
[2024-05-17 08:01:40] 2024-05-17 15:01:25,264 | INFO     | model: linear, x: [1715949798.0, 1715949859.0, 1715949920.0, 1715949981.0, 1715950042.0, 1715950103.0, 1715950164.0, 1715950225.0, 1715950286.0, 1715950347.0, 1715
[2024-05-17 08:01:40] 2024-05-17 15:01:25,264 | INFO     | sum of square deviations: 779958810.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,265 | INFO     | sum of deviations: -35266571537.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,265 | INFO     | mean x: 1715953915.5
[2024-05-17 08:01:40] 2024-05-17 15:01:25,265 | INFO     | mean y: 2826530.117647059
[2024-05-17 08:01:40] 2024-05-17 15:01:25,265 | INFO     | -- intersect: 77591297535.62627
[2024-05-17 08:01:40] 2024-05-17 15:01:25,265 | INFO     | intersect: 77591297535.62627
[2024-05-17 08:01:40] 2024-05-17 15:01:25,265 | INFO     | chi2: 0.9213895958290562
[2024-05-17 08:01:40] 2024-05-17 15:01:25,265 | INFO     | current chi2=0.9213895958290562 (change=9.528484870631702 %)
[2024-05-17 08:01:40] 2024-05-17 15:01:25,265 | INFO     | left removable region: 40
[2024-05-17 08:01:40] 2024-05-17 15:01:25,266 | INFO     | model: linear, x: [1715951018.0, 1715951079.0, 1715951140.0, 1715951201.0, 1715951262.0, 1715951323.0, 1715951384.0, 1715951445.0, 1715951506.0, 1715951567.0, 1715
[2024-05-17 08:01:40] 2024-05-17 15:01:25,266 | INFO     | sum of square deviations: 412686807.5
[2024-05-17 08:01:40] 2024-05-17 15:01:25,266 | INFO     | sum of deviations: -10153742190.0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,266 | INFO     | mean x: 1715954342.5
[2024-05-17 08:01:40] 2024-05-17 15:01:25,267 | INFO     | mean y: 2816009.1454545455
[2024-05-17 08:01:40] 2024-05-17 15:01:25,267 | INFO     | -- intersect: 42222139929.6368
[2024-05-17 08:01:40] 2024-05-17 15:01:25,267 | INFO     | intersect: 42222139929.6368
[2024-05-17 08:01:40] 2024-05-17 15:01:25,267 | INFO     | chi2: 0.0844453932585478
[2024-05-17 08:01:40] 2024-05-17 15:01:25,267 | INFO     | -- intersect: 42222139929.6368
[2024-05-17 08:01:40] 2024-05-17 15:01:25,267 | INFO     | current memory leak: -24.60 B/s (using 110 data points, chi2=0.08)
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | ..............................
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | . Timing measurements:
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | . get job = 0 s
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | . initial setup = 1 s
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | . payload setup = 5 s
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | . stage-in = 0 s
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | . payload execution = 9499 s
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | . stage-out = 1 s
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | . log creation = 0 s
[2024-05-17 08:01:40] 2024-05-17 15:01:25,268 | INFO     | ..............................
[2024-05-17 08:01:40] 2024-05-17 15:01:25,348 | INFO     | 
[2024-05-17 08:01:40] 2024-05-17 15:01:25,348 | INFO     | job summary report
[2024-05-17 08:01:40] 2024-05-17 15:01:25,348 | INFO     | --------------------------------------------------
[2024-05-17 08:01:40] 2024-05-17 15:01:25,348 | INFO     | PanDA job id: 6207676799
[2024-05-17 08:01:40] 2024-05-17 15:01:25,348 | INFO     | task id: 38920995
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | errors: (none)
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | pilot state: finished 
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | transexitcode: 0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | exeerrorcode: 0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | exeerrordiag: 
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | exitcode: 0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | exitmsg: OK
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | cpuconsumptiontime: 94387 s
[2024-05-17 08:01:40] 2024-05-17 15:01:25,349 | INFO     | nevents: 400
[2024-05-17 08:01:40] 2024-05-17 15:01:25,350 | INFO     | neventsw: 0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,350 | INFO     | pid: 270942
[2024-05-17 08:01:40] 2024-05-17 15:01:25,350 | INFO     | pgrp: 270942
[2024-05-17 08:01:40] 2024-05-17 15:01:25,350 | INFO     | corecount: 12
[2024-05-17 08:01:40] 2024-05-17 15:01:25,350 | INFO     | event service: False
[2024-05-17 08:01:40] 2024-05-17 15:01:25,350 | INFO     | sizes: {0: 2391994, 1: 2392193, 4: 2392399, 11: 2392427, 9508: 2420830, 9509: 2429784, 9510: 2429968, 9516: 2430138}
[2024-05-17 08:01:40] 2024-05-17 15:01:25,350 | INFO     | --------------------------------------------------
[2024-05-17 08:01:40] 2024-05-17 15:01:25,350 | INFO     | 
[2024-05-17 08:01:40] 2024-05-17 15:01:25,350 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 08:01:40] 2024-05-17 15:01:25,441 | WARNING  | process 270942 is no longer using CPU - aborting
[2024-05-17 08:01:40] 2024-05-17 15:01:25,442 | INFO     | aborting job monitoring since job object (job id=6207676799) has expired
[2024-05-17 08:01:40] 2024-05-17 15:01:25,471 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,472 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,472 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,472 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,474 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 08:01:40] 2024-05-17 15:01:25,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,474 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 08:01:40] 2024-05-17 15:01:25,474 | INFO     | job 6207676799 has completed (purged errors)
[2024-05-17 08:01:40] 2024-05-17 15:01:25,474 | INFO     | overall cleanup function is called
[2024-05-17 08:01:40] 2024-05-17 15:01:26,483 | INFO     | --- collectZombieJob: --- 10, [270942]
[2024-05-17 08:01:40] 2024-05-17 15:01:26,484 | INFO     | zombie collector waiting for pid 270942
[2024-05-17 08:01:40] 2024-05-17 15:01:26,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 08:01:40] 2024-05-17 15:01:27,489 | INFO     | collected zombie processes
[2024-05-17 08:01:40] 2024-05-17 15:01:27,489 | INFO     | will now attempt to kill all subprocesses of pid=270942
[2024-05-17 08:01:40] 2024-05-17 15:01:27,667 | INFO     | process IDs to be killed: [270942] (in reverse order)
[2024-05-17 08:01:40] 2024-05-17 15:01:27,803 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 08:01:40] 2024-05-17 15:01:27,804 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 08:01:40] 2024-05-17 15:01:27,815 | INFO     | did not find any defunct processes belonging to 270942
[2024-05-17 08:01:40] 2024-05-17 15:01:27,825 | INFO     | did not find any defunct processes belonging to 270942
[2024-05-17 08:01:40] 2024-05-17 15:01:27,825 | INFO     | ready for new job
[2024-05-17 08:01:40] 2024-05-17 15:01:27,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 08:01:40] 2024-05-17 15:01:27,828 | INFO     | *************************************
[2024-05-17 08:01:40] 2024-05-17 15:01:27,829 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 08:01:40] 2024-05-17 15:01:27,829 | INFO     | *************************************
[2024-05-17 08:01:40] 2024-05-17 15:01:27,829 | INFO     | 
[2024-05-17 08:01:40] 2024-05-17 15:01:27,833 | INFO     | architecture information:
[2024-05-17 08:01:40] 2024-05-17 15:01:27,833 | INFO     | executing command: cat /etc/os-release
[2024-05-17 08:01:40] 2024-05-17 15:01:27,855 | INFO     | cat /etc/os-release:
[2024-05-17 08:01:40] NAME="CentOS Linux"
[2024-05-17 08:01:40] VERSION="7 (Core)"
[2024-05-17 08:01:40] ID="centos"
[2024-05-17 08:01:40] ID_LIKE="rhel fedora"
[2024-05-17 08:01:40] VERSION_ID="7"
[2024-05-17 08:01:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 08:01:40] ANSI_COLOR="0;31"
[2024-05-17 08:01:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 08:01:40] HOME_URL="https://www.centos.org/"
[2024-05-17 08:01:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 08:01:40] 
[2024-05-17 08:01:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 08:01:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 08:01:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 08:01:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 08:01:40] 
[2024-05-17 08:01:40] 2024-05-17 15:01:27,855 | INFO     | *************************************
[2024-05-17 08:01:40] 2024-05-17 15:01:28,356 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 08:01:40] 2024-05-17 15:01:28,382 | INFO     | sufficient remaining disk space (2233880018944 B)
[2024-05-17 08:01:40] 2024-05-17 15:01:28,383 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 08:01:40] 2024-05-17 15:01:28,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 08:01:40] 2024-05-17 15:01:28,408 | INFO     | all data control threads have been joined
[2024-05-17 08:01:40] 2024-05-17 15:01:28,815 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 08:01:40] 2024-05-17 15:01:28,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 08:01:40] 2024-05-17 15:01:28,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 08:01:40] 2024-05-17 15:01:28,932 | INFO     | all payload control threads have been joined
[2024-05-17 08:01:40] 2024-05-17 15:01:28,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 08:01:40] 2024-05-17 15:01:28,948 | INFO     | aborting loop
[2024-05-17 08:01:40] 2024-05-17 15:01:28,952 | INFO     | all job control threads have been joined
[2024-05-17 08:01:40] 2024-05-17 15:01:29,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 08:01:40] 2024-05-17 15:01:29,389 | INFO     | [job] retrieve thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:29,413 | INFO     | [data] control thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:29,560 | INFO     | [job] validate thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:29,824 | INFO     | [payload] failed_post thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:29,893 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:29,933 | INFO     | [payload] control thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:29,954 | INFO     | [job] job monitor thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:29,958 | INFO     | [job] control thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:30,031 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:30,084 | INFO     | [data] copytool_in thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:30,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 08:01:40] 2024-05-17 15:01:30,350 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:30,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 08:01:40] 2024-05-17 15:01:30,449 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:30,908 | INFO     | [payload] validate_post thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:31,080 | INFO     | [data] copytool_out thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:31,361 | INFO     | [job] queue monitor thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:34,182 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 08:01:40] 2024-05-17 15:01:34,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677297170240)>', '<ExcThread(monitor, started 140676729652992)>']
[2024-05-17 08:01:40] 2024-05-17 15:01:34,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 08:01:40] 2024-05-17 15:01:34,842 | INFO     | [monitor] control thread has ended
[2024-05-17 08:01:40] 2024-05-17 15:01:39,322 | INFO     | all workflow threads have been joined
[2024-05-17 08:01:40] 2024-05-17 15:01:39,322 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 08:01:40] 2024-05-17 15:01:39,323 | INFO     | traces error code: 0
[2024-05-17 08:01:40] 2024-05-17 15:01:39,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 08:01:40] 2024-05-17 15:01:39,419 [wrapper] ==== pilot stdout END ====
[2024-05-17 08:01:40] 2024-05-17 15:01:39,422 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 08:01:40] 2024-05-17 15:01:39,425 [wrapper] pilotpid: 257634
[2024-05-17 08:01:40] 2024-05-17 15:01:39,427 [wrapper] Pilot exit status: 0
[2024-05-17 08:01:40] 2024-05-17 15:01:39,438 [wrapper] pandaids: 6207676799
[2024-05-17 08:01:40] 2024-05-17 15:01:39,528 [wrapper] cleanup: SIGTERM to supervisor_pilot 260613 257635
[2024-05-17 08:01:40] 2024-05-17 15:01:39,531 [wrapper] Test setup, not cleaning
[2024-05-17 08:01:40] 2024-05-17 15:01:39,534 [wrapper] ==== wrapper stdout END ====
[2024-05-17 08:01:40] 2024-05-17 15:01:39,537 [wrapper] ==== wrapper stderr END ====
[2024-05-17 08:01:40] 2024-05-17 15:01:39,542 [wrapper] apfmon messages muted
[2024-05-17 08:01:40]  *** Error codes and diagnostics ***
[2024-05-17 08:01:40]     "exeErrorCode": 0,
[2024-05-17 08:01:40]     "exeErrorDiag": "",
[2024-05-17 08:01:40]     "pilotErrorCode": 0,
[2024-05-17 08:01:40]     "pilotErrorDiag": "",
[2024-05-17 08:01:40]  *** Listing of results directory ***
[2024-05-17 08:01:40] total 969684
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc    467845 May 16 18:14 pilot3.tar.gz
[2024-05-17 08:01:40] -rwx------ 1 boinc boinc     32251 May 16 18:17 runpilot2-wrapper.sh
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc      5633 May 16 18:17 queuedata.json
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc       100 May 17 05:22 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 08:01:40] -rwxr-xr-x 1 boinc boinc      7986 May 17 05:22 run_atlas
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc       105 May 17 05:22 job.xml
[2024-05-17 08:01:40] -rw-r--r-- 2 boinc boinc 635260337 May 17 05:22 EVNT.38776180._000035.pool.root.1
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc      6622 May 17 05:22 init_data.xml
[2024-05-17 08:01:40] -rw-r--r-- 2 boinc boinc     17537 May 17 05:22 start_atlas.sh
[2024-05-17 08:01:40] drwxrwx--x 2 boinc boinc      4096 May 17 05:22 shared
[2024-05-17 08:01:40] -rw-r--r-- 2 boinc boinc    480001 May 17 05:22 input.tar.gz
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc         0 May 17 05:22 boinc_lockfile
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc      2610 May 17 05:22 pandaJob.out
[2024-05-17 08:01:40] -rw------- 1 boinc boinc       424 May 17 05:22 setup.sh.local
[2024-05-17 08:01:40] -rw------- 1 boinc boinc   1019370 May 17 05:22 agis_schedconf.cvmfs.json
[2024-05-17 08:01:40] -rw------- 1 boinc boinc         0 May 17 05:22 agis_ddmendpoints.agis.ALL.json
[2024-05-17 08:01:40] -rw------- 1 boinc boinc   1324701 May 17 05:22 cric_ddmendpoints.json
[2024-05-17 08:01:40] drwx------ 4 boinc boinc      4096 May 17 05:22 pilot3
[2024-05-17 08:01:40] -rw------- 1 boinc boinc 351434918 May 17 08:00 HITS.38920995._004577.pool.root.1
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc       530 May 17 08:00 boinc_task_state.xml
[2024-05-17 08:01:40] -rw------- 1 boinc boinc        95 May 17 08:00 pilot_heartbeat.json
[2024-05-17 08:01:40] -rw------- 1 boinc boinc      1056 May 17 08:01 memory_monitor_summary.json
[2024-05-17 08:01:40] -rw------- 1 boinc boinc    412498 May 17 08:01 log.38920995._004577.job.log.tgz.1
[2024-05-17 08:01:40] -rw------- 1 boinc boinc      7769 May 17 08:01 heartbeat.json
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc        27 May 17 08:01 wrapper_checkpoint.txt
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc      8192 May 17 08:01 boinc_mmap_file
[2024-05-17 08:01:40] -rw------- 1 boinc boinc      4210 May 17 08:01 pilotlog.txt
[2024-05-17 08:01:40] -rw------- 1 boinc boinc    953097 May 17 08:01 log.38920995._004577.job.log.1
[2024-05-17 08:01:40] -rw------- 1 boinc boinc       357 May 17 08:01 output.list
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc       620 May 17 08:01 runtime_log
[2024-05-17 08:01:40] -rw------- 1 boinc boinc   1382400 May 17 08:01 result.tar.gz
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc     11286 May 17 08:01 runtime_log.err
[2024-05-17 08:01:40] -rw------- 1 boinc boinc       655 May 17 08:01 0nMMDmkO1R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmZKQKDmRWi6tn.diag
[2024-05-17 08:01:40] -rw-r--r-- 1 boinc boinc     21855 May 17 08:01 stderr.txt
[2024-05-17 08:01:40] HITS file was successfully produced:
[2024-05-17 08:01:40] -rw------- 1 boinc boinc 351434918 May 17 08:00 shared/HITS.pool.root.1
[2024-05-17 08:01:40]  *** Contents of shared directory: ***
[2024-05-17 08:01:40] total 965424
[2024-05-17 08:01:40] -rw-r--r-- 2 boinc boinc 635260337 May 17 05:22 ATLAS.root_0
[2024-05-17 08:01:40] -rw-r--r-- 2 boinc boinc     17537 May 17 05:22 start_atlas.sh
[2024-05-17 08:01:40] -rw-r--r-- 2 boinc boinc    480001 May 17 05:22 input.tar.gz
[2024-05-17 08:01:40] -rw------- 1 boinc boinc 351434918 May 17 08:00 HITS.pool.root.1
[2024-05-17 08:01:40] -rw------- 1 boinc boinc   1382400 May 17 08:01 result.tar.gz
08:01:41 (248556): run_atlas exited; CPU time 93679.922574
08:01:41 (248556): called boinc_finish(0)

</stderr_txt>
]]>

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