Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:04:16 (98042): wrapper (7.7.26015): starting
02:04:16 (98042): wrapper: running run_atlas (--nthreads 8)
[2024-05-17 02:04:16] Arguments: --nthreads 8
[2024-05-17 02:04:16] Threads: 8
[2024-05-17 02:04:16] Checking for CVMFS
[2024-05-17 02:04:16] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 02:04:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 02:04:17] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 02:04:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 02:04:18] 2.11.2.0 46846 1034 78988 132826 2 272 13328002 18432000 22573 130560 0 7560903 98.476 23794672 64338 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2024-05-17 02:04:18] CVMFS is ok
[2024-05-17 02:04:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 02:04:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 02:04:18] Further information can be found at the LHC@home message board.
[2024-05-17 02:04:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 02:04:18] Checking for apptainer binary...
[2024-05-17 02:04:18] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 02:04:18] Running /usr/bin/apptainer --version
[2024-05-17 02:04:18] apptainer version 1.3.0-1.el7
[2024-05-17 02:04:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 02:04:28] c-212-10.aglt2.org
[2024-05-17 02:04:28] apptainer works
[2024-05-17 02:04:28] Set ATHENA_PROC_NUMBER=8
[2024-05-17 02:04:28] Set ATHENA_CORE_NUMBER=8
[2024-05-17 02:04:29] Starting ATLAS job with PandaID=6207650901
[2024-05-17 02:04:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 10:38:15]  *** The last 200 lines of the pilot log: ***
[2024-05-17 10:38:15] 2024-05-17 14:37:38,938 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:15] 2024-05-17 14:37:41,447 | INFO     | monitor loop #2188: job 0:6207650901 is in state 'finished'
[2024-05-17 10:38:15] 2024-05-17 14:37:41,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:15] 2024-05-17 14:37:43,970 | INFO     | monitor loop #2189: job 0:6207650901 is in state 'finished'
[2024-05-17 10:38:15] 2024-05-17 14:37:43,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:15] 2024-05-17 14:37:46,478 | INFO     | monitor loop #2190: job 0:6207650901 is in state 'finished'
[2024-05-17 10:38:15] 2024-05-17 14:37:46,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:15] 2024-05-17 14:37:48,983 | INFO     | monitor loop #2191: job 0:6207650901 is in state 'finished'
[2024-05-17 10:38:15] 2024-05-17 14:37:48,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:15] 2024-05-17 14:37:51,488 | INFO     | monitor loop #2192: job 0:6207650901 is in state 'finished'
[2024-05-17 10:38:15] 2024-05-17 14:37:51,488 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:15] 2024-05-17 14:37:53,995 | INFO     | monitor loop #2193: job 0:6207650901 is in state 'finished'
[2024-05-17 10:38:15] 2024-05-17 14:37:53,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 10:38:15] 2024-05-17 14:37:54,218 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-17 10:38:15] 2024-05-17 14:37:54,218 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6207650901/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 10:38:15] 2024-05-17 14:37:54,219 | INFO     | extracted standard info from prmon json
[2024-05-17 10:38:15] 2024-05-17 14:37:54,219 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 10:38:15] 2024-05-17 14:37:54,219 | WARNING  | GPU info not found in prmon json
[2024-05-17 10:38:15] 2024-05-17 14:37:54,220 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 10:38:15] 2024-05-17 14:37:54,220 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 10:38:15] 2024-05-17 14:37:54,267 | INFO     | fitting pss+swap vs Time
[2024-05-17 10:38:15] 2024-05-17 14:37:54,268 | INFO     | model: linear, x: [1715926158.0, 1715926219.0, 1715926280.0, 1715926341.0, 1715926402.0, 1715926463.0, 1715926524.0, 1715926585.0, 1715926646.0, 1715926707.0, 1715
[2024-05-17 10:38:15] 2024-05-17 14:37:54,288 | INFO     | sum of square deviations: 38760332462.549904
[2024-05-17 10:38:15] 2024-05-17 14:37:54,343 | INFO     | sum of deviations: 998136116318.1494
[2024-05-17 10:38:15] 2024-05-17 14:37:54,367 | INFO     | mean x: 1715941377.53
[2024-05-17 10:38:15] 2024-05-17 14:37:54,367 | INFO     | mean y: 2405732.49
[2024-05-17 10:38:15] 2024-05-17 14:37:54,367 | INFO     | -- intersect: -44185632748.66225
[2024-05-17 10:38:15] 2024-05-17 14:37:54,368 | INFO     | intersect: -44185632748.66225
[2024-05-17 10:38:15] 2024-05-17 14:37:54,368 | INFO     | chi2: 19.091530910136207
[2024-05-17 10:38:15] 2024-05-17 14:37:54,368 | INFO     | model: linear, x: [1715926158.0, 1715926219.0, 1715926280.0, 1715926341.0, 1715926402.0, 1715926463.0, 1715926524.0, 1715926585.0, 1715926646.0, 1715926707.0, 1715
[2024-05-17 10:38:15] 2024-05-17 14:37:54,369 | INFO     | sum of square deviations: 37609115452.545425
[2024-05-17 10:38:15] 2024-05-17 14:37:54,407 | INFO     | sum of deviations: 1056831980541.3336
[2024-05-17 10:38:15] 2024-05-17 14:37:54,407 | INFO     | mean x: 1715941225.030303
[2024-05-17 10:38:15] 2024-05-17 14:37:54,407 | INFO     | mean y: 2413451.644444444
[2024-05-17 10:38:15] 2024-05-17 14:37:54,407 | INFO     | -- intersect: -48216257514.69332
[2024-05-17 10:38:15] 2024-05-17 14:37:54,407 | INFO     | intersect: -48216257514.69332
[2024-05-17 10:38:15] 2024-05-17 14:37:54,408 | INFO     | chi2: 17.484985284292776
[2024-05-17 10:38:15] 2024-05-17 14:37:54,408 | INFO     | current chi2=17.484985284292776 (change=8.414964904624139 %)
[2024-05-17 10:38:15] 2024-05-17 14:37:54,408 | INFO     | right removable region: 494
[2024-05-17 10:38:15] 2024-05-17 14:37:54,408 | INFO     | model: linear, x: [1715926463.0, 1715926524.0, 1715926585.0, 1715926646.0, 1715926707.0, 1715926768.0, 1715926829.0, 1715926890.0, 1715926951.0, 1715927012.0, 1715
[2024-05-17 10:38:15] 2024-05-17 14:37:54,409 | INFO     | sum of square deviations: 37609106302.545425
[2024-05-17 10:38:15] 2024-05-17 14:37:54,424 | INFO     | sum of deviations: 842139712965.7281
[2024-05-17 10:38:15] 2024-05-17 14:37:54,424 | INFO     | mean x: 1715941530.030303
[2024-05-17 10:38:15] 2024-05-17 14:37:54,424 | INFO     | mean y: 2426388.084848485
[2024-05-17 10:38:15] 2024-05-17 14:37:54,424 | INFO     | -- intersect: -38420781436.6618
[2024-05-17 10:38:15] 2024-05-17 14:37:54,424 | INFO     | intersect: -38420781436.6618
[2024-05-17 10:38:15] 2024-05-17 14:37:54,425 | INFO     | chi2: 15.082251869921821
[2024-05-17 10:38:15] 2024-05-17 14:37:54,425 | INFO     | current chi2=15.082251869921821 (change=21.00030143777392 %)
[2024-05-17 10:38:15] 2024-05-17 14:37:54,425 | INFO     | left removable region: 10
[2024-05-17 10:38:15] 2024-05-17 14:37:54,425 | INFO     | model: linear, x: [1715926768.0, 1715926829.0, 1715926890.0, 1715926951.0, 1715927012.0, 1715927073.0, 1715927134.0, 1715927195.0, 1715927256.0, 1715927317.0, 1715
[2024-05-17 10:38:15] 2024-05-17 14:37:54,426 | INFO     | sum of square deviations: 35157135662.53505
[2024-05-17 10:38:15] 2024-05-17 14:37:54,442 | INFO     | sum of deviations: 792831898538.8219
[2024-05-17 10:38:15] 2024-05-17 14:37:54,458 | INFO     | mean x: 1715941499.5309918
[2024-05-17 10:38:15] 2024-05-17 14:37:54,458 | INFO     | mean y: 2448916.0785123967
[2024-05-17 10:38:15] 2024-05-17 14:37:54,458 | INFO     | -- intersect: -38693910477.74054
[2024-05-17 10:38:15] 2024-05-17 14:37:54,458 | INFO     | intersect: -38693910477.74054
[2024-05-17 10:38:15] 2024-05-17 14:37:54,459 | INFO     | chi2: 11.766590076131974
[2024-05-17 10:38:15] 2024-05-17 14:37:54,459 | INFO     | -- intersect: -38693910477.74054
[2024-05-17 10:38:15] 2024-05-17 14:37:54,459 | INFO     | current memory leak: 22.55 B/s (using 484 data points, chi2=11.77)
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | ..............................
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | . Timing measurements:
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | . get job = 0 s
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | . initial setup = 2 s
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | . payload setup = 55 s
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | . stage-in = 0 s
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | . payload execution = 30512 s
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | . stage-out = 7 s
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | . log creation = 1 s
[2024-05-17 10:38:15] 2024-05-17 14:37:54,460 | INFO     | ..............................
[2024-05-17 10:38:15] 2024-05-17 14:37:54,573 | INFO     | 
[2024-05-17 10:38:15] 2024-05-17 14:37:54,580 | INFO     | job summary report
[2024-05-17 10:38:15] 2024-05-17 14:37:54,580 | INFO     | --------------------------------------------------
[2024-05-17 10:38:15] 2024-05-17 14:37:54,580 | INFO     | PanDA job id: 6207650901
[2024-05-17 10:38:15] 2024-05-17 14:37:54,580 | INFO     | task id: 38920995
[2024-05-17 10:38:15] 2024-05-17 14:37:54,580 | INFO     | errors: (none)
[2024-05-17 10:38:15] 2024-05-17 14:37:54,580 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 10:38:15] 2024-05-17 14:37:54,580 | INFO     | pilot state: finished 
[2024-05-17 10:38:15] 2024-05-17 14:37:54,580 | INFO     | transexitcode: 0
[2024-05-17 10:38:15] 2024-05-17 14:37:54,580 | INFO     | exeerrorcode: 0
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | exeerrordiag: 
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | exitcode: 0
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | exitmsg: OK
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | cpuconsumptiontime: 101935 s
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | nevents: 400
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | neventsw: 0
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | pid: 38293
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | pgrp: 38293
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | corecount: 8
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | event service: False
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | sizes: {0: 2391903, 1: 2392102, 12: 2392102, 23: 2392130, 34: 2392158, 42: 2392392, 44: 2392548, 30569: 2429805, 30570: 2429804, 30578: 2438876, 30635: 2438990}
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | --------------------------------------------------
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | 
[2024-05-17 10:38:15] 2024-05-17 14:37:54,581 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2024-05-17 10:38:15] 2024-05-17 14:37:54,983 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,983 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,983 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,983 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,984 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 10:38:15] 2024-05-17 14:37:54,985 | INFO     | job 6207650901 has completed (purged errors)
[2024-05-17 10:38:15] 2024-05-17 14:37:54,985 | INFO     | overall cleanup function is called
[2024-05-17 10:38:15] 2024-05-17 14:37:56,004 | INFO     | --- collectZombieJob: --- 10, [38293]
[2024-05-17 10:38:15] 2024-05-17 14:37:56,004 | INFO     | zombie collector waiting for pid 38293
[2024-05-17 10:38:15] 2024-05-17 14:37:56,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 10:38:15] 2024-05-17 14:37:57,010 | INFO     | collected zombie processes
[2024-05-17 10:38:15] 2024-05-17 14:37:57,010 | INFO     | will now attempt to kill all subprocesses of pid=38293
[2024-05-17 10:38:15] 2024-05-17 14:37:57,635 | INFO     | process IDs to be killed: [38293] (in reverse order)
[2024-05-17 10:38:15] 2024-05-17 14:37:58,952 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 10:38:15] 2024-05-17 14:37:58,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 10:38:15] 2024-05-17 14:37:59,019 | INFO     | did not find any defunct processes belonging to 38293
[2024-05-17 10:38:15] 2024-05-17 14:37:59,047 | INFO     | did not find any defunct processes belonging to 38293
[2024-05-17 10:38:15] 2024-05-17 14:37:59,047 | INFO     | ready for new job
[2024-05-17 10:38:15] 2024-05-17 14:37:59,047 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 10:38:15] 2024-05-17 14:37:59,053 | INFO     | *************************************
[2024-05-17 10:38:15] 2024-05-17 14:37:59,054 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 10:38:15] 2024-05-17 14:37:59,054 | INFO     | *************************************
[2024-05-17 10:38:15] 2024-05-17 14:37:59,054 | INFO     | 
[2024-05-17 10:38:15] 2024-05-17 14:37:59,062 | INFO     | architecture information:
[2024-05-17 10:38:15] 2024-05-17 14:37:59,074 | INFO     | executing command: cat /etc/os-release
[2024-05-17 10:38:15] 2024-05-17 14:37:59,178 | INFO     | cat /etc/os-release:
[2024-05-17 10:38:15] NAME="CentOS Linux"
[2024-05-17 10:38:15] VERSION="7 (Core)"
[2024-05-17 10:38:15] ID="centos"
[2024-05-17 10:38:15] ID_LIKE="rhel fedora"
[2024-05-17 10:38:15] VERSION_ID="7"
[2024-05-17 10:38:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 10:38:15] ANSI_COLOR="0;31"
[2024-05-17 10:38:15] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 10:38:15] HOME_URL="https://www.centos.org/"
[2024-05-17 10:38:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 10:38:15] 
[2024-05-17 10:38:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 10:38:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 10:38:15] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 10:38:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 10:38:15] 
[2024-05-17 10:38:15] 2024-05-17 14:37:59,178 | INFO     | *************************************
[2024-05-17 10:38:15] 2024-05-17 14:37:59,687 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2024-05-17 10:38:15] 2024-05-17 14:37:59,827 | INFO     | sufficient remaining disk space (98216968192 B)
[2024-05-17 10:38:15] 2024-05-17 14:37:59,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 10:38:15] 2024-05-17 14:37:59,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 10:38:15] 2024-05-17 14:37:59,828 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 10:38:15] 2024-05-17 14:37:59,830 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 10:38:15] 2024-05-17 14:37:59,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 10:38:15] 2024-05-17 14:37:59,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 10:38:15] 2024-05-17 14:37:59,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 10:38:15] 2024-05-17 14:38:00,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 10:38:15] 2024-05-17 14:38:00,019 | INFO     | aborting loop
[2024-05-17 10:38:15] 2024-05-17 14:38:00,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 10:38:15] 2024-05-17 14:38:00,591 | INFO     | all payload control threads have been joined
[2024-05-17 10:38:15] 2024-05-17 14:38:00,836 | INFO     | [job] queue monitor thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:00,840 | INFO     | [job] retrieve thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:00,908 | INFO     | all data control threads have been joined
[2024-05-17 10:38:15] 2024-05-17 14:38:01,025 | INFO     | [job] job monitor thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:01,267 | INFO     | [payload] validate_post thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:01,286 | INFO     | [payload] failed_post thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:01,418 | INFO     | all job control threads have been joined
[2024-05-17 10:38:15] 2024-05-17 14:38:01,583 | INFO     | [job] validate thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:01,591 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:01,595 | INFO     | [data] copytool_in thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:01,603 | INFO     | [payload] control thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:01,614 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:01,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 10:38:15] 2024-05-17 14:38:01,914 | INFO     | [data] control thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:02,056 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:02,060 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:02,086 | INFO     | [data] copytool_out thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:02,425 | INFO     | [job] control thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:05,780 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 10:38:15] 2024-05-17 14:38:05,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501314922304)>', '<ExcThread(monitor, started 140501021861632)>']
[2024-05-17 10:38:15] 2024-05-17 14:38:05,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 10:38:15] 2024-05-17 14:38:05,868 | INFO     | [monitor] control thread has ended
[2024-05-17 10:38:15] 2024-05-17 14:38:10,840 | INFO     | all workflow threads have been joined
[2024-05-17 10:38:15] 2024-05-17 14:38:10,840 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 10:38:15] 2024-05-17 14:38:10,845 | INFO     | traces error code: 0
[2024-05-17 10:38:15] 2024-05-17 14:38:10,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 10:38:15] 2024-05-17 14:38:11,909 [wrapper] ==== pilot stdout END ====
[2024-05-17 10:38:15] 2024-05-17 14:38:11,998 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 10:38:15] 2024-05-17 14:38:12,082 [wrapper] pilotpid: 14105
[2024-05-17 10:38:15] 2024-05-17 14:38:12,126 [wrapper] Pilot exit status: 0
[2024-05-17 10:38:15] 2024-05-17 14:38:12,459 [wrapper] pandaids: 6207650901
[2024-05-17 10:38:15] 2024-05-17 14:38:12,986 [wrapper] cleanup: SIGTERM to supervisor_pilot 12439 14106
[2024-05-17 10:38:15] 2024-05-17 14:38:13,052 [wrapper] Test setup, not cleaning
[2024-05-17 10:38:15] 2024-05-17 14:38:13,092 [wrapper] ==== wrapper stdout END ====
[2024-05-17 10:38:15] 2024-05-17 14:38:13,130 [wrapper] ==== wrapper stderr END ====
[2024-05-17 10:38:15] 2024-05-17 14:38:13,231 [wrapper] apfmon messages muted
[2024-05-17 10:38:15]  *** Error codes and diagnostics ***
[2024-05-17 10:38:15]     "exeErrorCode": 0,
[2024-05-17 10:38:15]     "exeErrorDiag": "",
[2024-05-17 10:38:15]     "pilotErrorCode": 0,
[2024-05-17 10:38:15]     "pilotErrorDiag": "",
[2024-05-17 10:38:15]  *** Listing of results directory ***
[2024-05-17 10:38:15] total 973280
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas    467845 May 16 20:36 pilot3.tar.gz
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas      5633 May 16 20:45 queuedata.json
[2024-05-17 10:38:15] -rwx------ 1 boincer umatlas     32251 May 16 20:46 runpilot2-wrapper.sh
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas       100 May 17 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 10:38:15] -rwxr-xr-x 1 boincer umatlas      7986 May 17 02:04 run_atlas
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas       105 May 17 02:04 job.xml
[2024-05-17 10:38:15] -rw-r--r-- 2 boincer umatlas 631534608 May 17 02:04 EVNT.38776180._000171.pool.root.1
[2024-05-17 10:38:15] -rw-r--r-- 2 boincer umatlas     17537 May 17 02:04 start_atlas.sh
[2024-05-17 10:38:15] drwxrwx--x 2 boincer umatlas      4096 May 17 02:04 shared
[2024-05-17 10:38:15] -rw-r--r-- 2 boincer umatlas    480001 May 17 02:04 input.tar.gz
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas         0 May 17 02:04 boinc_lockfile
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas      2613 May 17 02:04 pandaJob.out
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas       467 May 17 02:04 setup.sh.local
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas   1019364 May 17 02:05 agis_schedconf.cvmfs.json
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas   1324701 May 17 02:05 cric_ddmendpoints.json
[2024-05-17 10:38:15] drwx------ 4 boincer umatlas      4096 May 17 02:05 pilot3
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas      6389 May 17 10:29 init_data.xml
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas 354457742 May 17 10:35 HITS.38920995._004525.pool.root.1
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas       532 May 17 10:35 boinc_task_state.xml
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas      1091 May 17 10:36 memory_monitor_summary.json
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas         0 May 17 10:36 agis_ddmendpoints.agis.ALL.json
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas    581228 May 17 10:36 log.38920995._004525.job.log.tgz.1
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas        95 May 17 10:37 pilot_heartbeat.json
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas      7774 May 17 10:37 heartbeat.json
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas      4334 May 17 10:38 pilotlog.txt
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas        29 May 17 10:38 wrapper_checkpoint.txt
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas   2977455 May 17 10:38 log.38920995._004525.job.log.1
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas       357 May 17 10:38 output.list
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas       620 May 17 10:38 runtime_log
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas   3573760 May 17 10:38 result.tar.gz
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas       653 May 17 10:38 zJGNDm4u0R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmUIQKDmaExCUo.diag
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas     11405 May 17 10:38 runtime_log.err
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas      8192 May 17 10:38 boinc_mmap_file
[2024-05-17 10:38:15] -rw-r--r-- 1 boincer umatlas     21929 May 17 10:38 stderr.txt
[2024-05-17 10:38:15] HITS file was successfully produced:
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas 354457742 May 17 10:35 shared/HITS.pool.root.1
[2024-05-17 10:38:15]  *** Contents of shared directory: ***
[2024-05-17 10:38:15] total 966880
[2024-05-17 10:38:15] -rw-r--r-- 2 boincer umatlas 631534608 May 17 02:04 ATLAS.root_0
[2024-05-17 10:38:15] -rw-r--r-- 2 boincer umatlas     17537 May 17 02:04 start_atlas.sh
[2024-05-17 10:38:15] -rw-r--r-- 2 boincer umatlas    480001 May 17 02:04 input.tar.gz
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas 354457742 May 17 10:35 HITS.pool.root.1
[2024-05-17 10:38:15] -rw------- 1 boincer umatlas   3573760 May 17 10:38 result.tar.gz
10:38:17 (98042): run_atlas exited; CPU time 99541.198673
10:38:17 (98042): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN