Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:06:38 (5805): wrapper (7.7.26015): starting
00:06:38 (5805): wrapper: running run_atlas (--nthreads 8)
[2024-05-17 00:06:38] Arguments: --nthreads 8
[2024-05-17 00:06:38] Threads: 8
[2024-05-17 00:06:38] Checking for CVMFS
[2024-05-17 00:06:38] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 00:06:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 00:06:38] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 00:06:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 00:06:39] 2.11.2.0 134330 1149 118968 132824 3 344 10648518 18432001 17375 130560 0 3161872 97.701 15890721 41899 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-17 00:06:39] CVMFS is ok
[2024-05-17 00:06:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 00:06:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 00:06:39] Further information can be found at the LHC@home message board.
[2024-05-17 00:06:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 00:06:39] Checking for apptainer binary...
[2024-05-17 00:06:39] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 00:06:39] Running /usr/bin/apptainer --version
[2024-05-17 00:06:39] apptainer version 1.3.0-1.el7
[2024-05-17 00:06:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 00:06:41] c6-12-27-3.aglt2.org
[2024-05-17 00:06:41] apptainer works
[2024-05-17 00:06:41] Set ATHENA_PROC_NUMBER=8
[2024-05-17 00:06:41] Set ATHENA_CORE_NUMBER=8
[2024-05-17 00:06:41] Starting ATLAS job with PandaID=6207650506
[2024-05-17 00:06:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 12:03:48]  *** The last 200 lines of the pilot log: ***
[2024-05-17 12:03:48] 2024-05-17 16:03:13,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 12:03:48] 2024-05-17 16:03:15,934 | INFO     | monitor loop #2851: job 0:6207650506 is in state 'finished'
[2024-05-17 12:03:48] 2024-05-17 16:03:15,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 12:03:48] 2024-05-17 16:03:18,445 | INFO     | monitor loop #2852: job 0:6207650506 is in state 'finished'
[2024-05-17 12:03:48] 2024-05-17 16:03:18,449 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 12:03:48] 2024-05-17 16:03:20,954 | INFO     | monitor loop #2853: job 0:6207650506 is in state 'finished'
[2024-05-17 12:03:48] 2024-05-17 16:03:20,954 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 12:03:48] 2024-05-17 16:03:23,459 | INFO     | monitor loop #2854: job 0:6207650506 is in state 'finished'
[2024-05-17 12:03:48] 2024-05-17 16:03:23,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 12:03:48] 2024-05-17 16:03:25,968 | INFO     | monitor loop #2855: job 0:6207650506 is in state 'finished'
[2024-05-17 12:03:48] 2024-05-17 16:03:25,968 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 12:03:48] 2024-05-17 16:03:28,473 | INFO     | monitor loop #2856: job 0:6207650506 is in state 'finished'
[2024-05-17 12:03:48] 2024-05-17 16:03:28,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 12:03:48] 2024-05-17 16:03:29,820 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 12:03:48] 2024-05-17 16:03:29,820 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6207650506/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 12:03:48] 2024-05-17 16:03:29,821 | INFO     | extracted standard info from prmon json
[2024-05-17 12:03:48] 2024-05-17 16:03:29,821 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 12:03:48] 2024-05-17 16:03:29,821 | WARNING  | GPU info not found in prmon json
[2024-05-17 12:03:48] 2024-05-17 16:03:29,822 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 12:03:48] 2024-05-17 16:03:29,822 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 12:03:48] 2024-05-17 16:03:29,858 | INFO     | fitting pss+swap vs Time
[2024-05-17 12:03:48] 2024-05-17 16:03:29,860 | INFO     | model: linear, x: [1715918859.0, 1715918920.0, 1715918981.0, 1715919042.0, 1715919103.0, 1715919164.0, 1715919225.0, 1715919286.0, 1715919347.0, 1715919408.0, 1715
[2024-05-17 12:03:48] 2024-05-17 16:03:29,860 | INFO     | sum of square deviations: 107731997818.48923
[2024-05-17 12:03:48] 2024-05-17 16:03:29,876 | INFO     | sum of deviations: 1375937546976.8367
[2024-05-17 12:03:48] 2024-05-17 16:03:29,876 | INFO     | mean x: 1715940270.224751
[2024-05-17 12:03:48] 2024-05-17 16:03:29,876 | INFO     | mean y: 2447121.2162162163
[2024-05-17 12:03:48] 2024-05-17 16:03:29,876 | INFO     | -- intersect: -21913294663.780266
[2024-05-17 12:03:48] 2024-05-17 16:03:29,876 | INFO     | intersect: -21913294663.780266
[2024-05-17 12:03:48] 2024-05-17 16:03:29,877 | INFO     | chi2: 17.704269333440102
[2024-05-17 12:03:48] 2024-05-17 16:03:29,878 | INFO     | model: linear, x: [1715918859.0, 1715918920.0, 1715918981.0, 1715919042.0, 1715919103.0, 1715919164.0, 1715919225.0, 1715919286.0, 1715919347.0, 1715919408.0, 1715
[2024-05-17 12:03:48] 2024-05-17 16:03:29,879 | INFO     | sum of square deviations: 105449668330.73505
[2024-05-17 12:03:48] 2024-05-17 16:03:29,893 | INFO     | sum of deviations: 1460519389224.671
[2024-05-17 12:03:48] 2024-05-17 16:03:29,893 | INFO     | mean x: 1715940117.726361
[2024-05-17 12:03:48] 2024-05-17 16:03:29,893 | INFO     | mean y: 2452745.0558739253
[2024-05-17 12:03:48] 2024-05-17 16:03:29,893 | INFO     | -- intersect: -23763992919.12031
[2024-05-17 12:03:48] 2024-05-17 16:03:29,893 | INFO     | intersect: -23763992919.12031
[2024-05-17 12:03:48] 2024-05-17 16:03:29,895 | INFO     | chi2: 16.195023173693748
[2024-05-17 12:03:48] 2024-05-17 16:03:29,895 | INFO     | current chi2=16.195023173693748 (change=8.524758245152011 %)
[2024-05-17 12:03:48] 2024-05-17 16:03:29,895 | INFO     | right removable region: 697
[2024-05-17 12:03:48] 2024-05-17 16:03:29,896 | INFO     | model: linear, x: [1715919164.0, 1715919225.0, 1715919286.0, 1715919347.0, 1715919408.0, 1715919469.0, 1715919530.0, 1715919591.0, 1715919652.0, 1715919713.0, 1715
[2024-05-17 12:03:48] 2024-05-17 16:03:29,896 | INFO     | sum of square deviations: 105449571950.73503
[2024-05-17 12:03:48] 2024-05-17 16:03:29,911 | INFO     | sum of deviations: 1163284244633.072
[2024-05-17 12:03:48] 2024-05-17 16:03:29,911 | INFO     | mean x: 1715940422.726361
[2024-05-17 12:03:48] 2024-05-17 16:03:29,912 | INFO     | mean y: 2461321.1103151864
[2024-05-17 12:03:48] 2024-05-17 16:03:29,912 | INFO     | -- intersect: -18927216832.720024
[2024-05-17 12:03:48] 2024-05-17 16:03:29,912 | INFO     | intersect: -18927216832.720024
[2024-05-17 12:03:48] 2024-05-17 16:03:29,913 | INFO     | chi2: 14.052260358250756
[2024-05-17 12:03:48] 2024-05-17 16:03:29,913 | INFO     | current chi2=14.052260358250756 (change=20.627843524111864 %)
[2024-05-17 12:03:48] 2024-05-17 16:03:29,913 | INFO     | left removable region: 10
[2024-05-17 12:03:48] 2024-05-17 16:03:29,914 | INFO     | model: linear, x: [1715919469.0, 1715919530.0, 1715919591.0, 1715919652.0, 1715919713.0, 1715919774.0, 1715919835.0, 1715919896.0, 1715919957.0, 1715920018.0, 1715
[2024-05-17 12:03:48] 2024-05-17 16:03:29,915 | INFO     | sum of square deviations: 100542302601.66246
[2024-05-17 12:03:48] 2024-05-17 16:03:29,929 | INFO     | sum of deviations: 1072311863604.5974
[2024-05-17 12:03:48] 2024-05-17 16:03:29,929 | INFO     | mean x: 1715940392.2299855
[2024-05-17 12:03:48] 2024-05-17 16:03:29,929 | INFO     | mean y: 2478959.825327511
[2024-05-17 12:03:48] 2024-05-17 16:03:29,929 | INFO     | -- intersect: -18298506716.98485
[2024-05-17 12:03:48] 2024-05-17 16:03:29,929 | INFO     | intersect: -18298506716.98485
[2024-05-17 12:03:48] 2024-05-17 16:03:29,932 | INFO     | chi2: 10.205908282065243
[2024-05-17 12:03:48] 2024-05-17 16:03:29,933 | INFO     | -- intersect: -18298506716.98485
[2024-05-17 12:03:48] 2024-05-17 16:03:29,933 | INFO     | current memory leak: 10.67 B/s (using 687 data points, chi2=10.21)
[2024-05-17 12:03:48] 2024-05-17 16:03:29,934 | INFO     | ..............................
[2024-05-17 12:03:48] 2024-05-17 16:03:29,934 | INFO     | . Timing measurements:
[2024-05-17 12:03:48] 2024-05-17 16:03:29,934 | INFO     | . get job = 0 s
[2024-05-17 12:03:48] 2024-05-17 16:03:29,934 | INFO     | . initial setup = 1 s
[2024-05-17 12:03:48] 2024-05-17 16:03:29,935 | INFO     | . payload setup = 9 s
[2024-05-17 12:03:48] 2024-05-17 16:03:29,935 | INFO     | . stage-in = 0 s
[2024-05-17 12:03:48] 2024-05-17 16:03:29,935 | INFO     | . payload execution = 42891 s
[2024-05-17 12:03:48] 2024-05-17 16:03:29,935 | INFO     | . stage-out = 6 s
[2024-05-17 12:03:48] 2024-05-17 16:03:29,935 | INFO     | . log creation = 1 s
[2024-05-17 12:03:48] 2024-05-17 16:03:29,935 | INFO     | ..............................
[2024-05-17 12:03:48] 2024-05-17 16:03:30,087 | INFO     | 
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | job summary report
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | --------------------------------------------------
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | PanDA job id: 6207650506
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | task id: 38920987
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | errors: (none)
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | pilot state: finished 
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | transexitcode: 0
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | exeerrorcode: 0
[2024-05-17 12:03:48] 2024-05-17 16:03:30,088 | INFO     | exeerrordiag: 
[2024-05-17 12:03:48] 2024-05-17 16:03:30,089 | INFO     | exitcode: 0
[2024-05-17 12:03:48] 2024-05-17 16:03:30,089 | INFO     | exitmsg: OK
[2024-05-17 12:03:48] 2024-05-17 16:03:30,089 | INFO     | cpuconsumptiontime: 109801 s
[2024-05-17 12:03:48] 2024-05-17 16:03:30,089 | INFO     | nevents: 400
[2024-05-17 12:03:48] 2024-05-17 16:03:30,089 | INFO     | neventsw: 0
[2024-05-17 12:03:48] 2024-05-17 16:03:30,090 | INFO     | pid: 71868
[2024-05-17 12:03:48] 2024-05-17 16:03:30,090 | INFO     | pgrp: 71868
[2024-05-17 12:03:48] 2024-05-17 16:03:30,090 | INFO     | corecount: 8
[2024-05-17 12:03:48] 2024-05-17 16:03:30,090 | INFO     | event service: False
[2024-05-17 12:03:48] 2024-05-17 16:03:30,090 | INFO     | sizes: {0: 2391956, 1: 2392155, 9: 2392361, 11: 2392389, 42904: 2436496, 42905: 2436495, 42912: 2445695, 42970: 2445809}
[2024-05-17 12:03:48] 2024-05-17 16:03:30,090 | INFO     | --------------------------------------------------
[2024-05-17 12:03:48] 2024-05-17 16:03:30,090 | INFO     | 
[2024-05-17 12:03:48] 2024-05-17 16:03:30,090 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-05-17 12:03:48] 2024-05-17 16:03:30,246 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | job 6207650506 has completed (purged errors)
[2024-05-17 12:03:48] 2024-05-17 16:03:30,248 | INFO     | overall cleanup function is called
[2024-05-17 12:03:48] 2024-05-17 16:03:31,257 | INFO     | --- collectZombieJob: --- 10, [71868]
[2024-05-17 12:03:48] 2024-05-17 16:03:31,257 | INFO     | zombie collector waiting for pid 71868
[2024-05-17 12:03:48] 2024-05-17 16:03:31,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 12:03:48] 2024-05-17 16:03:32,263 | INFO     | collected zombie processes
[2024-05-17 12:03:48] 2024-05-17 16:03:32,263 | INFO     | will now attempt to kill all subprocesses of pid=71868
[2024-05-17 12:03:48] 2024-05-17 16:03:32,798 | INFO     | process IDs to be killed: [71868] (in reverse order)
[2024-05-17 12:03:48] 2024-05-17 16:03:33,935 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 12:03:48] 2024-05-17 16:03:33,935 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 12:03:48] 2024-05-17 16:03:33,953 | INFO     | did not find any defunct processes belonging to 71868
[2024-05-17 12:03:48] 2024-05-17 16:03:33,969 | INFO     | did not find any defunct processes belonging to 71868
[2024-05-17 12:03:48] 2024-05-17 16:03:33,970 | INFO     | ready for new job
[2024-05-17 12:03:48] 2024-05-17 16:03:33,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 12:03:48] 2024-05-17 16:03:33,973 | INFO     | *************************************
[2024-05-17 12:03:48] 2024-05-17 16:03:33,973 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 12:03:48] 2024-05-17 16:03:33,973 | INFO     | *************************************
[2024-05-17 12:03:48] 2024-05-17 16:03:33,973 | INFO     | 
[2024-05-17 12:03:48] 2024-05-17 16:03:33,978 | INFO     | architecture information:
[2024-05-17 12:03:48] 2024-05-17 16:03:33,979 | INFO     | executing command: cat /etc/os-release
[2024-05-17 12:03:48] 2024-05-17 16:03:34,122 | INFO     | cat /etc/os-release:
[2024-05-17 12:03:48] NAME="CentOS Linux"
[2024-05-17 12:03:48] VERSION="7 (Core)"
[2024-05-17 12:03:48] ID="centos"
[2024-05-17 12:03:48] ID_LIKE="rhel fedora"
[2024-05-17 12:03:48] VERSION_ID="7"
[2024-05-17 12:03:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 12:03:48] ANSI_COLOR="0;31"
[2024-05-17 12:03:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 12:03:48] HOME_URL="https://www.centos.org/"
[2024-05-17 12:03:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 12:03:48] 
[2024-05-17 12:03:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 12:03:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 12:03:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 12:03:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 12:03:48] 
[2024-05-17 12:03:48] 2024-05-17 16:03:34,122 | INFO     | *************************************
[2024-05-17 12:03:48] 2024-05-17 16:03:34,628 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-05-17 12:03:48] 2024-05-17 16:03:34,905 | INFO     | sufficient remaining disk space (98289319936 B)
[2024-05-17 12:03:48] 2024-05-17 16:03:34,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 12:03:48] 2024-05-17 16:03:34,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 12:03:48] 2024-05-17 16:03:34,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 12:03:48] 2024-05-17 16:03:34,906 | INFO     | aborting loop
[2024-05-17 12:03:48] 2024-05-17 16:03:34,906 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 12:03:48] 2024-05-17 16:03:34,906 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 12:03:48] 2024-05-17 16:03:34,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 12:03:48] 2024-05-17 16:03:34,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 12:03:48] 2024-05-17 16:03:35,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 12:03:48] 2024-05-17 16:03:35,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 12:03:48] 2024-05-17 16:03:35,224 | INFO     | all payload control threads have been joined
[2024-05-17 12:03:48] 2024-05-17 16:03:35,313 | INFO     | all data control threads have been joined
[2024-05-17 12:03:48] 2024-05-17 16:03:35,916 | INFO     | [job] retrieve thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:35,920 | INFO     | [job] job monitor thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:36,108 | INFO     | [job] queue monitor thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:36,143 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:36,146 | INFO     | [data] copytool_in thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:36,232 | INFO     | [payload] control thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:36,318 | INFO     | [data] control thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:36,333 | INFO     | all job control threads have been joined
[2024-05-17 12:03:48] 2024-05-17 16:03:36,603 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:37,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 12:03:48] 2024-05-17 16:03:37,118 | INFO     | [data] copytool_out thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:37,144 | INFO     | [payload] failed_post thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:37,210 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:37,250 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:37,254 | INFO     | [job] validate thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:37,352 | INFO     | [job] control thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:37,428 | INFO     | [payload] validate_post thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:41,071 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 12:03:48] 2024-05-17 16:03:41,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787617793856)>', '<ExcThread(monitor, started 139787193267968)>']
[2024-05-17 12:03:48] 2024-05-17 16:03:41,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 12:03:48] 2024-05-17 16:03:41,971 | INFO     | [monitor] control thread has ended
[2024-05-17 12:03:48] 2024-05-17 16:03:46,152 | INFO     | all workflow threads have been joined
[2024-05-17 12:03:48] 2024-05-17 16:03:46,152 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 12:03:48] 2024-05-17 16:03:46,153 | INFO     | traces error code: 0
[2024-05-17 12:03:48] 2024-05-17 16:03:46,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 12:03:48] 2024-05-17 16:03:46,436 [wrapper] ==== pilot stdout END ====
[2024-05-17 12:03:48] 2024-05-17 16:03:46,463 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 12:03:48] 2024-05-17 16:03:46,500 [wrapper] pilotpid: 29461
[2024-05-17 12:03:48] 2024-05-17 16:03:46,525 [wrapper] Pilot exit status: 0
[2024-05-17 12:03:48] 2024-05-17 16:03:46,778 [wrapper] pandaids: 6207650506
[2024-05-17 12:03:48] 2024-05-17 16:03:47,274 [wrapper] cleanup: SIGTERM to supervisor_pilot 279802 29462
[2024-05-17 12:03:48] 2024-05-17 16:03:47,331 [wrapper] Test setup, not cleaning
[2024-05-17 12:03:48] 2024-05-17 16:03:47,355 [wrapper] ==== wrapper stdout END ====
[2024-05-17 12:03:48] 2024-05-17 16:03:47,403 [wrapper] ==== wrapper stderr END ====
[2024-05-17 12:03:48] 2024-05-17 16:03:47,499 [wrapper] apfmon messages muted
[2024-05-17 12:03:48]  *** Error codes and diagnostics ***
[2024-05-17 12:03:48]     "exeErrorCode": 0,
[2024-05-17 12:03:48]     "exeErrorDiag": "",
[2024-05-17 12:03:48]     "pilotErrorCode": 0,
[2024-05-17 12:03:48]     "pilotErrorDiag": "",
[2024-05-17 12:03:48]  *** Listing of results directory ***
[2024-05-17 12:03:48] total 956588
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas    467845 May 16 20:19 pilot3.tar.gz
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas      5633 May 16 20:25 queuedata.json
[2024-05-17 12:03:48] -rwx------ 1 boincer umatlas     32251 May 16 20:25 runpilot2-wrapper.sh
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas       100 May 17 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 12:03:48] -rwxr-xr-x 1 boincer umatlas      7986 May 17 00:06 run_atlas
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas       105 May 17 00:06 job.xml
[2024-05-17 12:03:48] -rw-r--r-- 2 boincer umatlas 636235903 May 17 00:06 EVNT.38776170._000102.pool.root.1
[2024-05-17 12:03:48] -rw-r--r-- 2 boincer umatlas     17537 May 17 00:06 start_atlas.sh
[2024-05-17 12:03:48] drwxrwx--x 2 boincer umatlas      4096 May 17 00:06 shared
[2024-05-17 12:03:48] -rw-r--r-- 2 boincer umatlas    479993 May 17 00:06 input.tar.gz
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas         0 May 17 00:06 boinc_lockfile
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas      2616 May 17 00:06 pandaJob.out
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas       467 May 17 00:06 setup.sh.local
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas   1019372 May 17 00:06 agis_schedconf.cvmfs.json
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas   1324701 May 17 00:06 cric_ddmendpoints.json
[2024-05-17 12:03:48] drwx------ 4 boincer umatlas      4096 May 17 00:07 pilot3
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas 329676147 May 17 11:59 HITS.38920987._002713.pool.root.1
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas       532 May 17 11:59 boinc_task_state.xml
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas      6386 May 17 12:01 init_data.xml
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas      1067 May 17 12:02 memory_monitor_summary.json
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas         0 May 17 12:02 agis_ddmendpoints.agis.ALL.json
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas    717321 May 17 12:02 log.38920987._002713.job.log.tgz.1
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas        95 May 17 12:03 pilot_heartbeat.json
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas      7787 May 17 12:03 heartbeat.json
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas        29 May 17 12:03 wrapper_checkpoint.txt
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas      8192 May 17 12:03 boinc_mmap_file
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas      4334 May 17 12:03 pilotlog.txt
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas   4327679 May 17 12:03 log.38920987._002713.job.log.1
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas       357 May 17 12:03 output.list
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas       620 May 17 12:03 runtime_log
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas   5068800 May 17 12:03 result.tar.gz
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas     11415 May 17 12:03 runtime_log.err
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas       656 May 17 12:03 FDnLDmxa0R5nsSi4apGgGQJmABFKDmABFKDm4ySLDmSHQKDmOk3i2m.diag
[2024-05-17 12:03:48] -rw-r--r-- 1 boincer umatlas     21913 May 17 12:03 stderr.txt
[2024-05-17 12:03:48] HITS file was successfully produced:
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas 329676147 May 17 11:59 shared/HITS.pool.root.1
[2024-05-17 12:03:48]  *** Contents of shared directory: ***
[2024-05-17 12:03:48] total 948732
[2024-05-17 12:03:48] -rw-r--r-- 2 boincer umatlas 636235903 May 17 00:06 ATLAS.root_0
[2024-05-17 12:03:48] -rw-r--r-- 2 boincer umatlas     17537 May 17 00:06 start_atlas.sh
[2024-05-17 12:03:48] -rw-r--r-- 2 boincer umatlas    479993 May 17 00:06 input.tar.gz
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas 329676147 May 17 11:59 HITS.pool.root.1
[2024-05-17 12:03:48] -rw------- 1 boincer umatlas   5068800 May 17 12:03 result.tar.gz
12:03:50 (5805): run_atlas exited; CPU time 109061.308355
12:03:50 (5805): called boinc_finish(0)

</stderr_txt>
]]>

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