Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:00:32 (1291734): wrapper (7.7.26015): starting
10:00:32 (1291734): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 10:00:32] Arguments: --nthreads 4
[2024-05-18 10:00:32] Threads: 4
[2024-05-18 10:00:32] Checking for CVMFS
[2024-05-18 10:00:32] No cvmfs_config command found, will try listing directly
[2024-05-18 10:00:32] CVMFS is ok
[2024-05-18 10:00:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 10:00:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 10:00:32] Further information can be found at the LHC@home message board.
[2024-05-18 10:00:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 10:00:32] Checking for apptainer binary...
[2024-05-18 10:00:32] which: no apptainer in ((null))
[2024-05-18 10:00:32] apptainer is not installed, using version from CVMFS
[2024-05-18 10:00:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 10:00:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2024-05-18 10:00:33] apptainer works
[2024-05-18 10:00:33] Set ATHENA_PROC_NUMBER=4
[2024-05-18 10:00:33] Set ATHENA_CORE_NUMBER=4
[2024-05-18 10:00:33] Starting ATLAS job with PandaID=6207649268
[2024-05-18 10:00:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 13:53:08]  *** The last 200 lines of the pilot log: ***
[2024-05-18 13:53:08] 2024-05-18 11:52:50,185 | INFO     | intersect: -27179945145.777336
[2024-05-18 13:53:08] 2024-05-18 11:52:50,185 | INFO     | chi2: 1.5169824338982496
[2024-05-18 13:53:08] 2024-05-18 11:52:50,185 | INFO     | current chi2=1.5169824338982496 (change=60.55891668986564 %)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,185 | INFO     | model: linear, x: [1716019879.0, 1716019940.0, 1716020001.0, 1716020062.0, 1716020123.0, 1716020184.0, 1716020245.0, 1716020306.0, 1716020367.0, 1716020428.0, 1716
[2024-05-18 13:53:08] 2024-05-18 11:52:50,185 | INFO     | sum of square deviations: 3212467674.5
[2024-05-18 13:53:08] 2024-05-18 11:52:50,186 | INFO     | sum of deviations: 11301287213.499996
[2024-05-18 13:53:08] 2024-05-18 11:52:50,186 | INFO     | mean x: 1716026497.5
[2024-05-18 13:53:08] 2024-05-18 11:52:50,186 | INFO     | mean y: 2373305.8119266056
[2024-05-18 13:53:08] 2024-05-18 11:52:50,186 | INFO     | -- intersect: -6034514930.656438
[2024-05-18 13:53:08] 2024-05-18 11:52:50,186 | INFO     | intersect: -6034514930.656438
[2024-05-18 13:53:08] 2024-05-18 11:52:50,186 | INFO     | chi2: 0.0414490615863195
[2024-05-18 13:53:08] 2024-05-18 11:52:50,186 | INFO     | current chi2=0.0414490615863195 (change=97.26766370789106 %)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,186 | INFO     | model: linear, x: [1716020184.0, 1716020245.0, 1716020306.0, 1716020367.0, 1716020428.0, 1716020489.0, 1716020550.0, 1716020611.0, 1716020672.0, 1716020733.0, 1716
[2024-05-18 13:53:08] 2024-05-18 11:52:50,186 | INFO     | sum of square deviations: 2996454322.0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,187 | INFO     | sum of deviations: 6218946522.999997
[2024-05-18 13:53:08] 2024-05-18 11:52:50,187 | INFO     | mean x: 1716026650.0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,187 | INFO     | mean y: 2376850.704225352
[2024-05-18 13:53:08] 2024-05-18 11:52:50,187 | INFO     | -- intersect: -3559125118.4864244
[2024-05-18 13:53:08] 2024-05-18 11:52:50,187 | INFO     | intersect: -3559125118.4864244
[2024-05-18 13:53:08] 2024-05-18 11:52:50,187 | INFO     | chi2: 0.003417606183618004
[2024-05-18 13:53:08] 2024-05-18 11:52:50,187 | INFO     | current chi2=0.003417606183618004 (change=91.7546838147332 %)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,188 | INFO     | model: linear, x: [1716020489.0, 1716020550.0, 1716020611.0, 1716020672.0, 1716020733.0, 1716020794.0, 1716020855.0, 1716020916.0, 1716020977.0, 1716021038.0, 1716
[2024-05-18 13:53:08] 2024-05-18 11:52:50,188 | INFO     | sum of square deviations: 2790348132.0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,188 | INFO     | sum of deviations: 5061627164.500001
[2024-05-18 13:53:08] 2024-05-18 11:52:50,188 | INFO     | mean x: 1716026802.5
[2024-05-18 13:53:08] 2024-05-18 11:52:50,188 | INFO     | mean y: 2377714.6009615385
[2024-05-18 13:53:08] 2024-05-18 11:52:50,188 | INFO     | -- intersect: -3110455332.6211467
[2024-05-18 13:53:08] 2024-05-18 11:52:50,188 | INFO     | intersect: -3110455332.6211467
[2024-05-18 13:53:08] 2024-05-18 11:52:50,189 | INFO     | chi2: 0.0017304090349520994
[2024-05-18 13:53:08] 2024-05-18 11:52:50,189 | INFO     | current chi2=0.0017304090349520994 (change=49.36780477380152 %)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,189 | INFO     | model: linear, x: [1716020794.0, 1716020855.0, 1716020916.0, 1716020977.0, 1716021038.0, 1716021099.0, 1716021160.0, 1716021221.0, 1716021282.0, 1716021343.0, 1716
[2024-05-18 13:53:08] 2024-05-18 11:52:50,189 | INFO     | sum of square deviations: 2593916542.0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,190 | INFO     | sum of deviations: 3786056439.0000005
[2024-05-18 13:53:08] 2024-05-18 11:52:50,190 | INFO     | mean x: 1716026955.0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,190 | INFO     | mean y: 2378703.3448275863
[2024-05-18 13:53:08] 2024-05-18 11:52:50,190 | INFO     | -- intersect: -2502318266.3833966
[2024-05-18 13:53:08] 2024-05-18 11:52:50,190 | INFO     | intersect: -2502318266.3833966
[2024-05-18 13:53:08] 2024-05-18 11:52:50,190 | INFO     | chi2: 0.0008728017062492996
[2024-05-18 13:53:08] 2024-05-18 11:52:50,190 | INFO     | current chi2=0.0008728017062492996 (change=49.5609599453195 %)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,190 | INFO     | model: linear, x: [1716021099.0, 1716021160.0, 1716021221.0, 1716021282.0, 1716021343.0, 1716021404.0, 1716021465.0, 1716021526.0, 1716021587.0, 1716021648.0, 1716
[2024-05-18 13:53:08] 2024-05-18 11:52:50,190 | INFO     | sum of square deviations: 2406926989.5
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | sum of deviations: 3227542269.0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | mean x: 1716027107.5
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | mean y: 2379157.98989899
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | -- intersect: -2298708514.535058
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | intersect: -2298708514.535058
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | chi2: 0.0007832306579532892
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | current chi2=0.0007832306579532892 (change=10.262474013819824 %)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | left removable region: 60
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | model: linear, x: [1716022929.0, 1716022990.0, 1716023051.0, 1716023112.0, 1716023173.0, 1716023234.0, 1716023295.0, 1716023356.0, 1716023417.0, 1716023478.0, 1716
[2024-05-18 13:53:08] 2024-05-18 11:52:50,191 | INFO     | sum of square deviations: 1318277740.5
[2024-05-18 13:53:08] 2024-05-18 11:52:50,192 | INFO     | sum of deviations: 959700159.5000001
[2024-05-18 13:53:08] 2024-05-18 11:52:50,192 | INFO     | mean x: 1716027839.5
[2024-05-18 13:53:08] 2024-05-18 11:52:50,192 | INFO     | mean y: 2381440.1913580247
[2024-05-18 13:53:08] 2024-05-18 11:52:50,192 | INFO     | -- intersect: -1246878970.3272634
[2024-05-18 13:53:08] 2024-05-18 11:52:50,192 | INFO     | intersect: -1246878970.3272634
[2024-05-18 13:53:08] 2024-05-18 11:52:50,192 | INFO     | chi2: 0.00042096672839971386
[2024-05-18 13:53:08] 2024-05-18 11:52:50,192 | INFO     | -- intersect: -1246878970.3272634
[2024-05-18 13:53:08] 2024-05-18 11:52:50,192 | INFO     | current memory leak: 0.73 B/s (using 162 data points, chi2=0.00)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | ..............................
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | . Timing measurements:
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | . get job = 0 s
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | . initial setup = 1 s
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | . payload setup = 5 s
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | . stage-in = 0 s
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | . payload execution = 13896 s
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | . stage-out = 0 s
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | . log creation = 0 s
[2024-05-18 13:53:08] 2024-05-18 11:52:50,193 | INFO     | ..............................
[2024-05-18 13:53:08] 2024-05-18 11:52:50,252 | INFO     | 
[2024-05-18 13:53:08] 2024-05-18 11:52:50,252 | INFO     | job summary report
[2024-05-18 13:53:08] 2024-05-18 11:52:50,252 | INFO     | --------------------------------------------------
[2024-05-18 13:53:08] 2024-05-18 11:52:50,252 | INFO     | PanDA job id: 6207649268
[2024-05-18 13:53:08] 2024-05-18 11:52:50,252 | INFO     | task id: 38920987
[2024-05-18 13:53:08] 2024-05-18 11:52:50,252 | INFO     | errors: (none)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | pilot state: finished 
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | transexitcode: 0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | exeerrorcode: 0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | exeerrordiag: 
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | exitcode: 0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | exitmsg: OK
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | cpuconsumptiontime: 52810 s
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | nevents: 400
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | neventsw: 0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | pid: 1303877
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | pgrp: 1303877
[2024-05-18 13:53:08] 2024-05-18 11:52:50,253 | INFO     | corecount: 4
[2024-05-18 13:53:08] 2024-05-18 11:52:50,254 | INFO     | event service: False
[2024-05-18 13:53:08] 2024-05-18 11:52:50,254 | INFO     | sizes: {0: 2390618, 1: 2392166, 5: 2392372, 12: 2392428, 13905: 2423021, 13906: 2432005, 13907: 2432189, 13911: 2432359}
[2024-05-18 13:53:08] 2024-05-18 11:52:50,254 | INFO     | --------------------------------------------------
[2024-05-18 13:53:08] 2024-05-18 11:52:50,254 | INFO     | 
[2024-05-18 13:53:08] 2024-05-18 11:52:50,254 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2024-05-18 13:53:08] 2024-05-18 11:52:50,276 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,276 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,276 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,276 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,277 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,278 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,278 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 13:53:08] 2024-05-18 11:52:50,278 | INFO     | job 6207649268 has completed (purged errors)
[2024-05-18 13:53:08] 2024-05-18 11:52:50,278 | INFO     | overall cleanup function is called
[2024-05-18 13:53:08] 2024-05-18 11:52:51,285 | INFO     | --- collectZombieJob: --- 10, [1303877]
[2024-05-18 13:53:08] 2024-05-18 11:52:51,286 | INFO     | zombie collector waiting for pid 1303877
[2024-05-18 13:53:08] 2024-05-18 11:52:51,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 13:53:08] 2024-05-18 11:52:52,291 | INFO     | collected zombie processes
[2024-05-18 13:53:08] 2024-05-18 11:52:52,291 | INFO     | will now attempt to kill all subprocesses of pid=1303877
[2024-05-18 13:53:08] 2024-05-18 11:52:52,457 | INFO     | process IDs to be killed: [1303877] (in reverse order)
[2024-05-18 13:53:08] 2024-05-18 11:52:52,562 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 13:53:08] 2024-05-18 11:52:52,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 13:53:08] 2024-05-18 11:52:52,573 | INFO     | did not find any defunct processes belonging to 1303877
[2024-05-18 13:53:08] 2024-05-18 11:52:52,581 | INFO     | did not find any defunct processes belonging to 1303877
[2024-05-18 13:53:08] 2024-05-18 11:52:52,581 | INFO     | ready for new job
[2024-05-18 13:53:08] 2024-05-18 11:52:52,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 13:53:08] 2024-05-18 11:52:52,582 | INFO     | *************************************
[2024-05-18 13:53:08] 2024-05-18 11:52:52,582 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 13:53:08] 2024-05-18 11:52:52,583 | INFO     | *************************************
[2024-05-18 13:53:08] 2024-05-18 11:52:52,583 | INFO     | 
[2024-05-18 13:53:08] 2024-05-18 11:52:52,587 | INFO     | architecture information:
[2024-05-18 13:53:08] 2024-05-18 11:52:52,587 | INFO     | executing command: cat /etc/os-release
[2024-05-18 13:53:08] 2024-05-18 11:52:52,604 | INFO     | cat /etc/os-release:
[2024-05-18 13:53:08] NAME="CentOS Linux"
[2024-05-18 13:53:08] VERSION="7 (Core)"
[2024-05-18 13:53:08] ID="centos"
[2024-05-18 13:53:08] ID_LIKE="rhel fedora"
[2024-05-18 13:53:08] VERSION_ID="7"
[2024-05-18 13:53:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 13:53:08] ANSI_COLOR="0;31"
[2024-05-18 13:53:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 13:53:08] HOME_URL="https://www.centos.org/"
[2024-05-18 13:53:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 13:53:08] 
[2024-05-18 13:53:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 13:53:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 13:53:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 13:53:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 13:53:08] 
[2024-05-18 13:53:08] 2024-05-18 11:52:52,604 | INFO     | *************************************
[2024-05-18 13:53:08] 2024-05-18 11:52:53,107 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2024-05-18 13:53:08] 2024-05-18 11:52:53,127 | INFO     | sufficient remaining disk space (3111049494528 B)
[2024-05-18 13:53:08] 2024-05-18 11:52:53,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 13:53:08] 2024-05-18 11:52:53,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 13:53:08] 2024-05-18 11:52:53,128 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 13:53:08] 2024-05-18 11:52:53,129 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 13:53:08] 2024-05-18 11:52:53,129 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 13:53:08] 2024-05-18 11:52:53,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 13:53:08] 2024-05-18 11:52:53,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 13:53:08] 2024-05-18 11:52:53,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 13:53:08] 2024-05-18 11:52:53,624 | INFO     | aborting loop
[2024-05-18 13:53:08] 2024-05-18 11:52:53,868 | INFO     | all data control threads have been joined
[2024-05-18 13:53:08] 2024-05-18 11:52:54,120 | INFO     | all payload control threads have been joined
[2024-05-18 13:53:08] 2024-05-18 11:52:54,133 | INFO     | [job] retrieve thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:54,156 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:54,242 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:54,306 | INFO     | [job] validate thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:54,429 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:54,578 | INFO     | all job control threads have been joined
[2024-05-18 13:53:08] 2024-05-18 11:52:54,628 | INFO     | [payload] failed_post thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:54,629 | INFO     | [job] job monitor thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:54,845 | INFO     | [data] copytool_in thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:54,874 | INFO     | [data] control thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:55,064 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:55,096 | INFO     | [payload] validate_post thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:55,125 | INFO     | [payload] control thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:55,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 13:53:08] 2024-05-18 11:52:55,553 | INFO     | [data] copytool_out thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:55,582 | INFO     | [job] control thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:56,268 | INFO     | [job] queue monitor thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:52:56,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 13:53:08] 2024-05-18 11:53:00,573 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 13:53:08] 2024-05-18 11:53:02,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47428631917632)>', '<ExcThread(monitor, started 47428803168000)>']
[2024-05-18 13:53:08] 2024-05-18 11:53:03,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 13:53:08] 2024-05-18 11:53:03,180 | INFO     | [monitor] control thread has ended
[2024-05-18 13:53:08] 2024-05-18 11:53:07,661 | INFO     | all workflow threads have been joined
[2024-05-18 13:53:08] 2024-05-18 11:53:07,661 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 13:53:08] 2024-05-18 11:53:07,662 | INFO     | traces error code: 0
[2024-05-18 13:53:08] 2024-05-18 11:53:07,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 13:53:08] 2024-05-18 11:53:07,738 [wrapper] ==== pilot stdout END ====
[2024-05-18 13:53:08] 2024-05-18 11:53:07,741 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 13:53:08] 2024-05-18 11:53:07,743 [wrapper] pilotpid: 1296418
[2024-05-18 13:53:08] 2024-05-18 11:53:07,745 [wrapper] Pilot exit status: 0
[2024-05-18 13:53:08] 2024-05-18 11:53:07,751 [wrapper] pandaids: 6207649268
[2024-05-18 13:53:08] 2024-05-18 11:53:07,890 [wrapper] cleanup: SIGTERM to supervisor_pilot 1759690 1296419
[2024-05-18 13:53:08] 2024-05-18 11:53:07,892 [wrapper] Test setup, not cleaning
[2024-05-18 13:53:08] 2024-05-18 11:53:07,893 [wrapper] ==== wrapper stdout END ====
[2024-05-18 13:53:08] 2024-05-18 11:53:07,895 [wrapper] ==== wrapper stderr END ====
[2024-05-18 13:53:08] 2024-05-18 11:53:07,898 [wrapper] apfmon messages muted
[2024-05-18 13:53:08]  *** Error codes and diagnostics ***
[2024-05-18 13:53:08]     "exeErrorCode": 0,
[2024-05-18 13:53:08]     "exeErrorDiag": "",
[2024-05-18 13:53:08]     "pilotErrorCode": 0,
[2024-05-18 13:53:08]     "pilotErrorDiag": "",
[2024-05-18 13:53:08]  *** Listing of results directory ***
[2024-05-18 13:53:08] total 957380
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc    467845 May 17 01:16 pilot3.tar.gz
[2024-05-18 13:53:08] -rwx------ 1 boinc boinc     32251 May 17 01:25 runpilot2-wrapper.sh
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc      5633 May 17 01:25 queuedata.json
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc       100 May 18 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 13:53:08] -rwxr-xr-x 1 boinc boinc      7986 May 18 10:00 run_atlas
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc       105 May 18 10:00 job.xml
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc      6646 May 18 10:00 init_data.xml
[2024-05-18 13:53:08] -rw-r--r-- 2 boinc boinc 638391806 May 18 10:00 EVNT.38776170._000092.pool.root.1
[2024-05-18 13:53:08] -rw-r--r-- 2 boinc boinc     17537 May 18 10:00 start_atlas.sh
[2024-05-18 13:53:08] drwxrwx--x 2 boinc boinc      4096 May 18 10:00 shared
[2024-05-18 13:53:08] -rw-r--r-- 2 boinc boinc    480003 May 18 10:00 input.tar.gz
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc         0 May 18 10:00 boinc_lockfile
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc      2616 May 18 10:00 pandaJob.out
[2024-05-18 13:53:08] -rw------- 1 boinc boinc       424 May 18 10:00 setup.sh.local
[2024-05-18 13:53:08] -rw------- 1 boinc boinc   1019073 May 18 10:00 agis_schedconf.cvmfs.json
[2024-05-18 13:53:08] -rw------- 1 boinc boinc   1324701 May 18 10:00 cric_ddmendpoints.json
[2024-05-18 13:53:08] drwx------ 4 boinc boinc      4096 May 18 10:00 pilot3
[2024-05-18 13:53:08] -rw------- 1 boinc boinc 334660507 May 18 13:52 HITS.38920987._002470.pool.root.1
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc       531 May 18 13:52 boinc_task_state.xml
[2024-05-18 13:53:08] -rw------- 1 boinc boinc        95 May 18 13:52 pilot_heartbeat.json
[2024-05-18 13:53:08] -rw------- 1 boinc boinc      1043 May 18 13:52 memory_monitor_summary.json
[2024-05-18 13:53:08] -rw------- 1 boinc boinc         0 May 18 13:52 agis_ddmendpoints.agis.ALL.json
[2024-05-18 13:53:08] -rw------- 1 boinc boinc    356797 May 18 13:52 log.38920987._002470.job.log.tgz.1
[2024-05-18 13:53:08] -rw------- 1 boinc boinc      7725 May 18 13:52 heartbeat.json
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc      8192 May 18 13:52 boinc_mmap_file
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc        27 May 18 13:52 wrapper_checkpoint.txt
[2024-05-18 13:53:08] -rw------- 1 boinc boinc      4346 May 18 13:53 pilotlog.txt
[2024-05-18 13:53:08] -rw------- 1 boinc boinc   1525177 May 18 13:53 log.38920987._002470.job.log.1
[2024-05-18 13:53:08] -rw------- 1 boinc boinc       357 May 18 13:53 output.list
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc       620 May 18 13:53 runtime_log
[2024-05-18 13:53:08] -rw------- 1 boinc boinc   1904640 May 18 13:53 result.tar.gz
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc     11429 May 18 13:53 runtime_log.err
[2024-05-18 13:53:08] -rw------- 1 boinc boinc       660 May 18 13:53 mgoMDmhezR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmfTZKDme8juAn.diag
[2024-05-18 13:53:08] -rw-r--r-- 1 boinc boinc     21426 May 18 13:53 stderr.txt
[2024-05-18 13:53:08] HITS file was successfully produced:
[2024-05-18 13:53:08] -rw------- 1 boinc boinc 334660507 May 18 13:52 shared/HITS.pool.root.1
[2024-05-18 13:53:08]  *** Contents of shared directory: ***
[2024-05-18 13:53:08] total 952612
[2024-05-18 13:53:08] -rw-r--r-- 2 boinc boinc 638391806 May 18 10:00 ATLAS.root_0
[2024-05-18 13:53:08] -rw-r--r-- 2 boinc boinc     17537 May 18 10:00 start_atlas.sh
[2024-05-18 13:53:08] -rw-r--r-- 2 boinc boinc    480003 May 18 10:00 input.tar.gz
[2024-05-18 13:53:08] -rw------- 1 boinc boinc 334660507 May 18 13:52 HITS.pool.root.1
[2024-05-18 13:53:08] -rw------- 1 boinc boinc   1904640 May 18 13:53 result.tar.gz
13:53:10 (1291734): run_atlas exited; CPU time 52447.719074
13:53:10 (1291734): called boinc_finish(0)

</stderr_txt>
]]>

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