Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:51:47 (1177742): wrapper (7.7.26015): starting
02:51:47 (1177742): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 02:51:47] Arguments: --nthreads 4
[2024-05-20 02:51:47] Threads: 4
[2024-05-20 02:51:47] Checking for CVMFS
[2024-05-20 02:51:47] No cvmfs_config command found, will try listing directly
[2024-05-20 02:51:47] CVMFS is ok
[2024-05-20 02:51:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 02:51:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 02:51:47] Further information can be found at the LHC@home message board.
[2024-05-20 02:51:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 02:51:47] Checking for apptainer binary...
[2024-05-20 02:51:47] which: no apptainer in ((null))
[2024-05-20 02:51:47] apptainer is not installed, using version from CVMFS
[2024-05-20 02:51:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 02:51:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-20 02:51:48] apptainer works
[2024-05-20 02:51:48] Set ATHENA_PROC_NUMBER=4
[2024-05-20 02:51:48] Set ATHENA_CORE_NUMBER=4
[2024-05-20 02:51:48] Starting ATLAS job with PandaID=6207649191
[2024-05-20 02:51:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 07:49:40]  *** The last 200 lines of the pilot log: ***
[2024-05-20 07:49:40] 2024-05-20 05:49:24,462 | INFO     | intersect: -33502885139.778778
[2024-05-20 07:49:40] 2024-05-20 05:49:24,463 | INFO     | chi2: 4.272315459960587
[2024-05-20 07:49:40] 2024-05-20 05:49:24,463 | INFO     | model: linear, x: [1716166343.0, 1716166404.0, 1716166465.0, 1716166526.0, 1716166587.0, 1716166648.0, 1716166709.0, 1716166770.0, 1716166831.0, 1716166892.0, 1716
[2024-05-20 07:49:40] 2024-05-20 05:49:24,463 | INFO     | sum of square deviations: 7330250928.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,466 | INFO     | sum of deviations: 147758967028.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,466 | INFO     | mean x: 1716175066.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,466 | INFO     | mean y: 2302251.128919861
[2024-05-20 07:49:40] 2024-05-20 05:49:24,466 | INFO     | -- intersect: -34591364116.109215
[2024-05-20 07:49:40] 2024-05-20 05:49:24,466 | INFO     | intersect: -34591364116.109215
[2024-05-20 07:49:40] 2024-05-20 05:49:24,466 | INFO     | chi2: 4.272355206239317
[2024-05-20 07:49:40] 2024-05-20 05:49:24,467 | INFO     | current chi2=4.272355206239317 (change=-0.0009303217213940697 %)
[2024-05-20 07:49:40] 2024-05-20 05:49:24,467 | INFO     | right removable region: 286
[2024-05-20 07:49:40] 2024-05-20 05:49:24,467 | INFO     | model: linear, x: [1716166648.0, 1716166709.0, 1716166770.0, 1716166831.0, 1716166892.0, 1716166953.0, 1716167014.0, 1716167075.0, 1716167136.0, 1716167197.0, 1716
[2024-05-20 07:49:40] 2024-05-20 05:49:24,467 | INFO     | sum of square deviations: 7330250928.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,470 | INFO     | sum of deviations: 80343337778.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,470 | INFO     | mean x: 1716175371.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,470 | INFO     | mean y: 2330891.9825783973
[2024-05-20 07:49:40] 2024-05-20 05:49:24,470 | INFO     | -- intersect: -18807837937.552673
[2024-05-20 07:49:40] 2024-05-20 05:49:24,470 | INFO     | intersect: -18807837937.552673
[2024-05-20 07:49:40] 2024-05-20 05:49:24,470 | INFO     | chi2: 1.6735958384542704
[2024-05-20 07:49:40] 2024-05-20 05:49:24,471 | INFO     | current chi2=1.6735958384542704 (change=60.8269601311297 %)
[2024-05-20 07:49:40] 2024-05-20 05:49:24,471 | INFO     | model: linear, x: [1716166953.0, 1716167014.0, 1716167075.0, 1716167136.0, 1716167197.0, 1716167258.0, 1716167319.0, 1716167380.0, 1716167441.0, 1716167502.0, 1716
[2024-05-20 07:49:40] 2024-05-20 05:49:24,471 | INFO     | sum of square deviations: 6953769450.5
[2024-05-20 07:49:40] 2024-05-20 05:49:24,473 | INFO     | sum of deviations: 22378296428.5
[2024-05-20 07:49:40] 2024-05-20 05:49:24,474 | INFO     | mean x: 1716175523.5
[2024-05-20 07:49:40] 2024-05-20 05:49:24,474 | INFO     | mean y: 2354372.6063829786
[2024-05-20 07:49:40] 2024-05-20 05:49:24,474 | INFO     | -- intersect: -5520561631.6706505
[2024-05-20 07:49:40] 2024-05-20 05:49:24,474 | INFO     | intersect: -5520561631.6706505
[2024-05-20 07:49:40] 2024-05-20 05:49:24,474 | INFO     | chi2: 0.05379002998388971
[2024-05-20 07:49:40] 2024-05-20 05:49:24,474 | INFO     | current chi2=0.05379002998388971 (change=96.78596057973172 %)
[2024-05-20 07:49:40] 2024-05-20 05:49:24,475 | INFO     | model: linear, x: [1716167258.0, 1716167319.0, 1716167380.0, 1716167441.0, 1716167502.0, 1716167563.0, 1716167624.0, 1716167685.0, 1716167746.0, 1716167807.0, 1716
[2024-05-20 07:49:40] 2024-05-20 05:49:24,475 | INFO     | sum of square deviations: 6590404498.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,477 | INFO     | sum of deviations: 14288569118.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,477 | INFO     | mean x: 1716175676.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,477 | INFO     | mean y: 2357741.5631768955
[2024-05-20 07:49:40] 2024-05-20 05:49:24,478 | INFO     | -- intersect: -3718460119.1004605
[2024-05-20 07:49:40] 2024-05-20 05:49:24,478 | INFO     | intersect: -3718460119.1004605
[2024-05-20 07:49:40] 2024-05-20 05:49:24,478 | INFO     | chi2: 0.0028915571826730766
[2024-05-20 07:49:40] 2024-05-20 05:49:24,478 | INFO     | current chi2=0.0028915571826730766 (change=94.62436220329474 %)
[2024-05-20 07:49:40] 2024-05-20 05:49:24,479 | INFO     | model: linear, x: [1716167563.0, 1716167624.0, 1716167685.0, 1716167746.0, 1716167807.0, 1716167868.0, 1716167929.0, 1716167990.0, 1716168051.0, 1716168112.0, 1716
[2024-05-20 07:49:40] 2024-05-20 05:49:24,479 | INFO     | sum of square deviations: 6239923508.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,481 | INFO     | sum of deviations: 12528704142.5
[2024-05-20 07:49:40] 2024-05-20 05:49:24,481 | INFO     | mean x: 1716175828.5
[2024-05-20 07:49:40] 2024-05-20 05:49:24,481 | INFO     | mean y: 2358506.7463235296
[2024-05-20 07:49:40] 2024-05-20 05:49:24,481 | INFO     | -- intersect: -3443430401.438209
[2024-05-20 07:49:40] 2024-05-20 05:49:24,481 | INFO     | intersect: -3443430401.438209
[2024-05-20 07:49:40] 2024-05-20 05:49:24,482 | INFO     | chi2: 0.0023298319866593494
[2024-05-20 07:49:40] 2024-05-20 05:49:24,482 | INFO     | current chi2=0.0023298319866593494 (change=19.42639071361698 %)
[2024-05-20 07:49:40] 2024-05-20 05:49:24,482 | INFO     | left removable region: 40
[2024-05-20 07:49:40] 2024-05-20 05:49:24,482 | INFO     | model: linear, x: [1716168783.0, 1716168844.0, 1716168905.0, 1716168966.0, 1716169027.0, 1716169088.0, 1716169149.0, 1716169210.0, 1716169271.0, 1716169332.0, 1716
[2024-05-20 07:49:40] 2024-05-20 05:49:24,482 | INFO     | sum of square deviations: 4616114457.5
[2024-05-20 07:49:40] 2024-05-20 05:49:24,484 | INFO     | sum of deviations: 7061969512.0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,484 | INFO     | mean x: 1716176255.5
[2024-05-20 07:49:40] 2024-05-20 05:49:24,484 | INFO     | mean y: 2360697.162601626
[2024-05-20 07:49:40] 2024-05-20 05:49:24,485 | INFO     | -- intersect: -2623134078.8319826
[2024-05-20 07:49:40] 2024-05-20 05:49:24,485 | INFO     | intersect: -2623134078.8319826
[2024-05-20 07:49:40] 2024-05-20 05:49:24,485 | INFO     | chi2: 0.0010197331171911627
[2024-05-20 07:49:40] 2024-05-20 05:49:24,485 | INFO     | -- intersect: -2623134078.8319826
[2024-05-20 07:49:40] 2024-05-20 05:49:24,485 | INFO     | current memory leak: 1.53 B/s (using 246 data points, chi2=0.00)
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | ..............................
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | . Timing measurements:
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | . get job = 0 s
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | . initial setup = 1 s
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | . payload setup = 5 s
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | . stage-in = 0 s
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | . payload execution = 17815 s
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | . stage-out = 0 s
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | . log creation = 0 s
[2024-05-20 07:49:40] 2024-05-20 05:49:24,486 | INFO     | ..............................
[2024-05-20 07:49:40] 2024-05-20 05:49:24,588 | INFO     | 
[2024-05-20 07:49:40] 2024-05-20 05:49:24,588 | INFO     | job summary report
[2024-05-20 07:49:40] 2024-05-20 05:49:24,588 | INFO     | --------------------------------------------------
[2024-05-20 07:49:40] 2024-05-20 05:49:24,588 | INFO     | PanDA job id: 6207649191
[2024-05-20 07:49:40] 2024-05-20 05:49:24,588 | INFO     | task id: 38920987
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | errors: (none)
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | pilot state: finished 
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | transexitcode: 0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | exeerrorcode: 0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | exeerrordiag: 
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | exitcode: 0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | exitmsg: OK
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | cpuconsumptiontime: 68663 s
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | nevents: 400
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | neventsw: 0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | pid: 1192382
[2024-05-20 07:49:40] 2024-05-20 05:49:24,589 | INFO     | pgrp: 1192382
[2024-05-20 07:49:40] 2024-05-20 05:49:24,590 | INFO     | corecount: 4
[2024-05-20 07:49:40] 2024-05-20 05:49:24,590 | INFO     | event service: False
[2024-05-20 07:49:40] 2024-05-20 05:49:24,590 | INFO     | sizes: {0: 2391965, 1: 2392164, 5: 2392370, 11: 2392426, 17824: 2424594, 17826: 2433578, 17827: 2433762, 17831: 2433932}
[2024-05-20 07:49:40] 2024-05-20 05:49:24,590 | INFO     | --------------------------------------------------
[2024-05-20 07:49:40] 2024-05-20 05:49:24,590 | INFO     | 
[2024-05-20 07:49:40] 2024-05-20 05:49:24,590 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2024-05-20 07:49:40] 2024-05-20 05:49:24,610 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,610 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,612 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,612 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,612 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 07:49:40] 2024-05-20 05:49:24,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,612 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 07:49:40] 2024-05-20 05:49:24,612 | INFO     | job 6207649191 has completed (purged errors)
[2024-05-20 07:49:40] 2024-05-20 05:49:24,613 | INFO     | overall cleanup function is called
[2024-05-20 07:49:40] 2024-05-20 05:49:25,620 | INFO     | --- collectZombieJob: --- 10, [1192382]
[2024-05-20 07:49:40] 2024-05-20 05:49:25,620 | INFO     | zombie collector waiting for pid 1192382
[2024-05-20 07:49:40] 2024-05-20 05:49:25,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 07:49:40] 2024-05-20 05:49:26,625 | INFO     | collected zombie processes
[2024-05-20 07:49:40] 2024-05-20 05:49:26,625 | INFO     | will now attempt to kill all subprocesses of pid=1192382
[2024-05-20 07:49:40] 2024-05-20 05:49:26,819 | INFO     | process IDs to be killed: [1192382] (in reverse order)
[2024-05-20 07:49:40] 2024-05-20 05:49:26,963 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 07:49:40] 2024-05-20 05:49:26,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 07:49:40] 2024-05-20 05:49:26,977 | INFO     | did not find any defunct processes belonging to 1192382
[2024-05-20 07:49:40] 2024-05-20 05:49:26,987 | INFO     | did not find any defunct processes belonging to 1192382
[2024-05-20 07:49:40] 2024-05-20 05:49:26,987 | INFO     | ready for new job
[2024-05-20 07:49:40] 2024-05-20 05:49:26,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 07:49:40] 2024-05-20 05:49:26,989 | INFO     | *************************************
[2024-05-20 07:49:40] 2024-05-20 05:49:26,989 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 07:49:40] 2024-05-20 05:49:26,989 | INFO     | *************************************
[2024-05-20 07:49:40] 2024-05-20 05:49:26,989 | INFO     | 
[2024-05-20 07:49:40] 2024-05-20 05:49:26,993 | INFO     | architecture information:
[2024-05-20 07:49:40] 2024-05-20 05:49:26,994 | INFO     | executing command: cat /etc/os-release
[2024-05-20 07:49:40] 2024-05-20 05:49:27,013 | INFO     | cat /etc/os-release:
[2024-05-20 07:49:40] NAME="CentOS Linux"
[2024-05-20 07:49:40] VERSION="7 (Core)"
[2024-05-20 07:49:40] ID="centos"
[2024-05-20 07:49:40] ID_LIKE="rhel fedora"
[2024-05-20 07:49:40] VERSION_ID="7"
[2024-05-20 07:49:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 07:49:40] ANSI_COLOR="0;31"
[2024-05-20 07:49:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 07:49:40] HOME_URL="https://www.centos.org/"
[2024-05-20 07:49:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 07:49:40] 
[2024-05-20 07:49:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 07:49:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 07:49:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 07:49:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 07:49:40] 
[2024-05-20 07:49:40] 2024-05-20 05:49:27,013 | INFO     | *************************************
[2024-05-20 07:49:40] 2024-05-20 05:49:27,516 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2024-05-20 07:49:40] 2024-05-20 05:49:27,535 | INFO     | sufficient remaining disk space (3114953342976 B)
[2024-05-20 07:49:40] 2024-05-20 05:49:27,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 07:49:40] 2024-05-20 05:49:27,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 07:49:40] 2024-05-20 05:49:27,536 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 07:49:40] 2024-05-20 05:49:27,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 07:49:40] 2024-05-20 05:49:27,537 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 07:49:40] 2024-05-20 05:49:27,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 07:49:40] 2024-05-20 05:49:27,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 07:49:40] 2024-05-20 05:49:27,607 | INFO     | all data control threads have been joined
[2024-05-20 07:49:40] 2024-05-20 05:49:28,384 | INFO     | all payload control threads have been joined
[2024-05-20 07:49:40] 2024-05-20 05:49:28,457 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 07:49:40] 2024-05-20 05:49:28,458 | INFO     | aborting loop
[2024-05-20 07:49:40] 2024-05-20 05:49:28,500 | INFO     | all job control threads have been joined
[2024-05-20 07:49:40] 2024-05-20 05:49:28,541 | INFO     | [job] retrieve thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:28,550 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:28,612 | INFO     | [data] control thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:28,727 | INFO     | [payload] failed_post thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:28,912 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:28,998 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:29,045 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:29,389 | INFO     | [payload] control thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:29,463 | INFO     | [job] job monitor thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:29,505 | INFO     | [job] control thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:29,542 | INFO     | [data] copytool_out thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:29,599 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 07:49:40] 2024-05-20 05:49:29,645 | INFO     | [data] copytool_in thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:29,685 | INFO     | [job] validate thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:29,822 | INFO     | [payload] validate_post thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:30,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 07:49:40] 2024-05-20 05:49:30,604 | INFO     | [job] queue monitor thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:34,179 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 07:49:40] 2024-05-20 05:49:34,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47032103507008)>', '<ExcThread(monitor, started 47032275019520)>']
[2024-05-20 07:49:40] 2024-05-20 05:49:34,572 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 07:49:40] 2024-05-20 05:49:34,572 | INFO     | [monitor] control thread has ended
[2024-05-20 07:49:40] 2024-05-20 05:49:39,290 | INFO     | all workflow threads have been joined
[2024-05-20 07:49:40] 2024-05-20 05:49:39,290 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 07:49:40] 2024-05-20 05:49:39,290 | INFO     | traces error code: 0
[2024-05-20 07:49:40] 2024-05-20 05:49:39,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 07:49:40] 2024-05-20 05:49:39,352 [wrapper] ==== pilot stdout END ====
[2024-05-20 07:49:40] 2024-05-20 05:49:39,354 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 07:49:40] 2024-05-20 05:49:39,356 [wrapper] pilotpid: 1182399
[2024-05-20 07:49:40] 2024-05-20 05:49:39,358 [wrapper] Pilot exit status: 0
[2024-05-20 07:49:40] 2024-05-20 05:49:39,366 [wrapper] pandaids: 6207649191
[2024-05-20 07:49:40] 2024-05-20 05:49:39,459 [wrapper] cleanup: SIGTERM to supervisor_pilot 3020183 1182400
[2024-05-20 07:49:40] 2024-05-20 05:49:39,461 [wrapper] Test setup, not cleaning
[2024-05-20 07:49:40] 2024-05-20 05:49:39,463 [wrapper] ==== wrapper stdout END ====
[2024-05-20 07:49:40] 2024-05-20 05:49:39,465 [wrapper] ==== wrapper stderr END ====
[2024-05-20 07:49:40] 2024-05-20 05:49:39,469 [wrapper] apfmon messages muted
[2024-05-20 07:49:40]  *** Error codes and diagnostics ***
[2024-05-20 07:49:40]     "exeErrorCode": 0,
[2024-05-20 07:49:40]     "exeErrorDiag": "",
[2024-05-20 07:49:40]     "pilotErrorCode": 0,
[2024-05-20 07:49:40]     "pilotErrorDiag": "",
[2024-05-20 07:49:40]  *** Listing of results directory ***
[2024-05-20 07:49:40] total 955928
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc    467845 May 17 01:16 pilot3.tar.gz
[2024-05-20 07:49:40] -rwx------ 1 boinc boinc     32251 May 17 01:16 runpilot2-wrapper.sh
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc      5633 May 17 01:16 queuedata.json
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc       100 May 20 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 07:49:40] -rwxr-xr-x 1 boinc boinc      7986 May 20 02:51 run_atlas
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc       105 May 20 02:51 job.xml
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc      6646 May 20 02:51 init_data.xml
[2024-05-20 07:49:40] -rw-r--r-- 2 boinc boinc 638326005 May 20 02:51 EVNT.38776170._000090.pool.root.1
[2024-05-20 07:49:40] -rw-r--r-- 2 boinc boinc     17537 May 20 02:51 start_atlas.sh
[2024-05-20 07:49:40] drwxrwx--x 2 boinc boinc      4096 May 20 02:51 shared
[2024-05-20 07:49:40] -rw-r--r-- 2 boinc boinc    479994 May 20 02:51 input.tar.gz
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc         0 May 20 02:51 boinc_lockfile
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc      2615 May 20 02:51 pandaJob.out
[2024-05-20 07:49:40] -rw------- 1 boinc boinc       424 May 20 02:51 setup.sh.local
[2024-05-20 07:49:40] -rw------- 1 boinc boinc   1013669 May 20 02:51 agis_schedconf.cvmfs.json
[2024-05-20 07:49:40] -rw------- 1 boinc boinc   1324701 May 20 02:51 cric_ddmendpoints.json
[2024-05-20 07:49:40] drwx------ 4 boinc boinc      4096 May 20 02:51 pilot3
[2024-05-20 07:49:40] -rw------- 1 boinc boinc 332418747 May 20 07:48 HITS.38920987._002401.pool.root.1
[2024-05-20 07:49:40] -rw------- 1 boinc boinc        95 May 20 07:48 pilot_heartbeat.json
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc       532 May 20 07:48 boinc_task_state.xml
[2024-05-20 07:49:40] -rw------- 1 boinc boinc      1042 May 20 07:49 memory_monitor_summary.json
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc      8192 May 20 07:49 boinc_mmap_file
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc        28 May 20 07:49 wrapper_checkpoint.txt
[2024-05-20 07:49:40] -rw------- 1 boinc boinc         0 May 20 07:49 agis_ddmendpoints.agis.ALL.json
[2024-05-20 07:49:40] -rw------- 1 boinc boinc    373577 May 20 07:49 log.38920987._002401.job.log.tgz.1
[2024-05-20 07:49:40] -rw------- 1 boinc boinc      7718 May 20 07:49 heartbeat.json
[2024-05-20 07:49:40] -rw------- 1 boinc boinc      4346 May 20 07:49 pilotlog.txt
[2024-05-20 07:49:40] -rw------- 1 boinc boinc   1925692 May 20 07:49 log.38920987._002401.job.log.1
[2024-05-20 07:49:40] -rw------- 1 boinc boinc       357 May 20 07:49 output.list
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc       620 May 20 07:49 runtime_log
[2024-05-20 07:49:40] -rw------- 1 boinc boinc   2314240 May 20 07:49 result.tar.gz
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc     11429 May 20 07:49 runtime_log.err
[2024-05-20 07:49:40] -rw------- 1 boinc boinc       658 May 20 07:49 cP2KDm9VzR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm0lKKDmESXwdm.diag
[2024-05-20 07:49:40] -rw-r--r-- 1 boinc boinc     21368 May 20 07:49 stderr.txt
[2024-05-20 07:49:40] HITS file was successfully produced:
[2024-05-20 07:49:40] -rw------- 1 boinc boinc 332418747 May 20 07:48 shared/HITS.pool.root.1
[2024-05-20 07:49:40]  *** Contents of shared directory: ***
[2024-05-20 07:49:40] total 950756
[2024-05-20 07:49:40] -rw-r--r-- 2 boinc boinc 638326005 May 20 02:51 ATLAS.root_0
[2024-05-20 07:49:40] -rw-r--r-- 2 boinc boinc     17537 May 20 02:51 start_atlas.sh
[2024-05-20 07:49:40] -rw-r--r-- 2 boinc boinc    479994 May 20 02:51 input.tar.gz
[2024-05-20 07:49:40] -rw------- 1 boinc boinc 332418747 May 20 07:48 HITS.pool.root.1
[2024-05-20 07:49:40] -rw------- 1 boinc boinc   2314240 May 20 07:49 result.tar.gz
07:49:41 (1177742): run_atlas exited; CPU time 68272.387628
07:49:41 (1177742): called boinc_finish(0)

</stderr_txt>
]]>

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