Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-17 04:39:19 (27537): Detected: vboxwrapper 26206
2024-05-17 04:39:19 (27537): Detected: BOINC client v7.24.1
2024-05-17 04:39:19 (27537): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-05-17 04:39:20 (27537): Successfully copied 'init_data.xml' to the shared directory.
2024-05-17 04:39:20 (27537): Create VM. (boinc_8e6fc9501071d8dd, slot#0)
2024-05-17 04:39:20 (27537): Setting Memory Size for VM. (4600MB)
2024-05-17 04:39:20 (27537): Setting CPU Count for VM. (6)
2024-05-17 04:39:20 (27537): Setting Chipset Options for VM.
2024-05-17 04:39:20 (27537): Setting Graphics Controller Options for VM.
2024-05-17 04:39:20 (27537): Setting Boot Options for VM.
2024-05-17 04:39:20 (27537): Setting Network Configuration for NAT.
2024-05-17 04:39:20 (27537): Enabling VM Network Access.
2024-05-17 04:39:20 (27537): Disabling USB Support for VM.
2024-05-17 04:39:20 (27537): Disabling COM Port Support for VM.
2024-05-17 04:39:20 (27537): Disabling LPT Port Support for VM.
2024-05-17 04:39:20 (27537): Disabling Audio Support for VM.
2024-05-17 04:39:20 (27537): Disabling Clipboard Support for VM.
2024-05-17 04:39:20 (27537): Disabling Drag and Drop Support for VM.
2024-05-17 04:39:20 (27537): Adding storage controller(s) to VM.
2024-05-17 04:39:20 (27537): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-17 04:39:21 (27537): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-17 04:39:21 (27537): forwarding host port 59635 to guest port 80
2024-05-17 04:39:21 (27537): Enabling remote desktop for VM.
2024-05-17 04:39:21 (27537): Required extension pack not installed, remote desktop not enabled.
2024-05-17 04:39:21 (27537): Enabling shared directory for VM.
2024-05-17 04:39:21 (27537): Starting VM using VBoxManage interface. (boinc_8e6fc9501071d8dd, slot#0)
2024-05-17 04:39:23 (27537): Successfully started VM. (PID = '27791')
2024-05-17 04:39:23 (27537): Reporting VM Process ID to BOINC.
2024-05-17 04:39:23 (27537): Guest Log: BIOS: VirtualBox 7.0.18
2024-05-17 04:39:23 (27537): Guest Log: CPUID EDX: 0x178bfbff
2024-05-17 04:39:23 (27537): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-17 04:39:23 (27537): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-17 04:39:23 (27537): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-17 04:39:23 (27537): Detected: Web Application Enabled (http://localhost:59635)
2024-05-17 04:39:23 (27537): Preference change detected
2024-05-17 04:39:23 (27537): Setting CPU throttle for VM. (50%)
2024-05-17 04:39:23 (27537): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-17 04:39:25 (27537): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-17 04:39:25 (27537): Guest Log: BIOS: Booting from Hard Disk...
2024-05-17 04:39:27 (27537): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-17 04:39:27 (27537): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-17 04:39:27 (27537): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-17 04:39:34 (27537): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-17 04:39:34 (27537): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-17 04:39:40 (27537): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-17 04:39:40 (27537): Guest Log: 00:00:00.000072 main     Log opened 2024-05-17T02:39:38.566823000Z
2024-05-17 04:39:40 (27537): Guest Log: 00:00:00.000130 main     OS Product: Linux
2024-05-17 04:39:40 (27537): Guest Log: 00:00:00.000142 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-17 04:39:40 (27537): Guest Log: 00:00:00.000160 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-17 04:39:40 (27537): Guest Log: 00:00:00.000169 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-17 04:39:40 (27537): Guest Log: 00:00:00.000169 main     Process ID: 1325
2024-05-17 04:39:40 (27537): Guest Log: 00:00:00.000169 main     Package type: LINUX_64BITS_GENERIC
2024-05-17 04:39:40 (27537): Guest Log: 00:00:00.000630 main     5.2.32 r132073 started. Verbose level = 0
2024-05-17 04:39:40 (27537): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-17 04:39:40 (27537): Guest Log: [INFO] Mounting shared directory
2024-05-17 04:39:40 (27537): Guest Log: [INFO] Checking for init_data.xml
2024-05-17 04:39:42 (27537): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-17 04:39:42 (27537): Guest Log: [INFO] Detected branch: prod
2024-05-17 04:39:42 (27537): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-17 04:39:42 (27537): Guest Log: Copying input files
2024-05-17 04:39:44 (27537): Guest Log: Copied input files into RunAtlas.
2024-05-17 04:39:44 (27537): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-17 04:39:44 (27537): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-17 04:39:44 (27537): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-17 04:39:44 (27537): Guest Log: Further information can be found at the LHC@home message board.
2024-05-17 04:39:51 (27537): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-17 04:39:51 (27537): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-17 04:39:51 (27537): Guest Log: 2.6.3.0 1601 0 32232 132822 4 1 3116989 4096000 0 65024 0 0 n/a 1 3 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-05-17 04:39:52 (27537): Guest Log: copied the webapp to /var/www
2024-05-17 04:39:52 (27537): Guest Log: ATHENA_PROC_NUMBER=6
2024-05-17 04:39:52 (27537): Guest Log: ATHENA_CORE_NUMBER=6
2024-05-17 04:39:52 (27537): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-17 04:39:52 (27537): Guest Log:  *** Starting ATLAS job. (PandaID=6207612735 taskID=38776146) ***
2024-05-17 06:18:23 (27537): Status Report: Elapsed Time: '6000.000000'
2024-05-17 06:18:23 (27537): Status Report: CPU Time: '14378.240000'
2024-05-17 07:36:49 (27537): Guest Log:  *** Job finished ***
2024-05-17 07:36:49 (27537): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:37,482 | INFO     | [data] queue_monitor thread has finished
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:40,750 | INFO     | job.realtimelogging is not enabled
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:41,755 | INFO     | [payload] run_realtimelog thread has finished
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:43,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445672421184)>', '<ExcThread(monitor, started 140444826597120)>']
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:44,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:44,136 | INFO     | [monitor] control thread has ended
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,576 | INFO     | all workflow threads have been joined
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,576 | INFO     | end of generic workflow (traces error code: 0)
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,577 | INFO     | traces error code: 0
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,610 [wrapper] ==== pilot stdout END ====
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,613 [wrapper] ==== wrapper stdout RESUME ====
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,615 [wrapper] pilotpid: 6502
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,618 [wrapper] Pilot exit status: 0
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,724 [wrapper] pandaids: 6207612735
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,741 [wrapper] cleanup: SIGTERM to supervisor_pilot  8947 6503
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,743 [wrapper] Test setup, not cleaning
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,745 [wrapper] ==== wrapper stdout END ====
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,748 [wrapper] ==== wrapper stderr END ====
2024-05-17 07:36:49 (27537): Guest Log: 2024-05-17 05:36:48,753 [wrapper] apfmon messages muted
2024-05-17 07:36:49 (27537): Guest Log:  *** Error codes and diagnostics ***
2024-05-17 07:36:49 (27537): Guest Log:     "exeErrorCode": 0,
2024-05-17 07:36:49 (27537): Guest Log:     "exeErrorDiag": "",
2024-05-17 07:36:49 (27537): Guest Log:     "pilotErrorCode": 0,
2024-05-17 07:36:49 (27537): Guest Log:     "pilotErrorDiag": "",
2024-05-17 07:36:49 (27537): Guest Log:  *** Listing of results directory ***
2024-05-17 07:36:49 (27537): Guest Log: total 274436
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 16 21:17 pilot3.tar.gz
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 16 21:20 queuedata.json
2024-05-17 07:36:49 (27537): Guest Log: -rwx------. 1 atlas atlas     32251 May 16 21:21 runpilot2-wrapper.sh
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 atlas atlas     17537 May 17 02:39 start_atlas.sh
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 atlas atlas    480000 May 17 02:39 input.tar.gz
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 atlas atlas      6875 May 17 02:39 init_data.xml
2024-05-17 07:36:49 (27537): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 17 02:39 EVNT.38776140._000062.pool.root.1 -> /data/./ATLAS.root_0
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 atlas atlas      2612 May 17 02:39 pandaJob.out
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas       424 May 17 02:39 setup.sh.local
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas   1019310 May 17 02:40 agis_schedconf.cvmfs.json
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas         0 May 17 02:40 agis_ddmendpoints.agis.ALL.json
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas   1324701 May 17 02:40 cric_ddmendpoints.json
2024-05-17 07:36:49 (27537): Guest Log: drwx------. 4 atlas atlas      4096 May 17 02:40 pilot3
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas 275757018 May 17 05:35 HITS.38776146._014620.pool.root.1
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas        95 May 17 05:35 pilot_heartbeat.json
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas      1031 May 17 05:36 memory_monitor_summary.json
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas    287058 May 17 05:36 log.38776146._014620.job.log.tgz.1
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas      7729 May 17 05:36 heartbeat.json
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas      4343 May 17 05:36 pilotlog.txt
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas    616200 May 17 05:36 log.38776146._014620.job.log.1
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas       357 May 17 05:36 output.list
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 17 05:36 runtime_log
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas    921600 May 17 05:36 result.tar.gz
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 atlas atlas     11015 May 17 05:36 runtime_log.err
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas       673 May 17 05:36 MCGNDmBjxR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmB9PKDm7bsrXn.diag
2024-05-17 07:36:49 (27537): Guest Log: Looking for outputfile HITS.38776146._014620.pool.root.1
2024-05-17 07:36:49 (27537): Guest Log: HITS file was successfully produced
2024-05-17 07:36:49 (27537): Guest Log: -rw-------. 1 atlas atlas 275757018 May 17 05:35 /home/atlas/RunAtlas/HITS.38776146._014620.pool.root.1
2024-05-17 07:36:49 (27537): Guest Log: Successfully finished the ATLAS job!
2024-05-17 07:36:49 (27537): Guest Log: Copying the results back to the shared directory!
2024-05-17 07:36:49 (27537): Guest Log:  *** Contents of shared directory: ***
2024-05-17 07:36:49 (27537): Guest Log: total 603748
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 root root 616797114 May 17 02:39 ATLAS.root_0
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 root root      6875 May 17 02:39 init_data.xml
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 root root    480000 May 17 02:39 input.tar.gz
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 root root    921600 May 17 05:36 result.tar.gz
2024-05-17 07:36:49 (27537): Guest Log: -rw-r--r--. 1 root root     17537 May 17 02:39 start_atlas.sh
2024-05-17 07:36:49 (27537): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-17 07:36:49 (27537): VM Completion File Detected.
2024-05-17 07:36:49 (27537): Powering off VM.
2024-05-17 07:36:49 (27537): Successfully stopped VM.
2024-05-17 07:36:49 (27537): Deregistering VM. (boinc_8e6fc9501071d8dd, slot#0)
2024-05-17 07:36:49 (27537): Removing network bandwidth throttle group from VM.
2024-05-17 07:36:49 (27537): Removing VM from VirtualBox.
07:36:54 (27537): called boinc_finish(0)

</stderr_txt>
]]>

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