Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:22:07 (50992): wrapper (7.7.26015): starting
20:22:07 (50992): wrapper: running run_atlas (--nthreads 8)
[2024-05-16 20:22:07] Arguments: --nthreads 8
[2024-05-16 20:22:07] Threads: 8
[2024-05-16 20:22:07] Checking for CVMFS
[2024-05-16 20:22:07] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 20:22:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 20:22:07] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 20:22:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 20:22:07] 2.11.2.0 91391 2956 208256 132819 2 106 17266534 18432000 12518 130560 0 18553812 99.056 32177174 47241 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-16 20:22:07] CVMFS is ok
[2024-05-16 20:22:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 20:22:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 20:22:07] Further information can be found at the LHC@home message board.
[2024-05-16 20:22:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 20:22:07] Checking for apptainer binary...
[2024-05-16 20:22:07] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 20:22:07] Running /usr/bin/apptainer --version
[2024-05-16 20:22:07] apptainer version 1.3.0-1.el7
[2024-05-16 20:22:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 20:22:08] c6-8-25-3.aglt2.org
[2024-05-16 20:22:08] apptainer works
[2024-05-16 20:22:08] Set ATHENA_PROC_NUMBER=8
[2024-05-16 20:22:08] Set ATHENA_CORE_NUMBER=8
[2024-05-16 20:22:08] Starting ATLAS job with PandaID=6207612720
[2024-05-16 20:22:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 23:21:00]  *** The last 200 lines of the pilot log: ***
[2024-05-16 23:21:00] 2024-05-17 03:20:44,560 | INFO     | monitor loop #827: job 0:6207612720 is in state 'finished'
[2024-05-16 23:21:00] 2024-05-17 03:20:44,560 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 23:21:00] 2024-05-17 03:20:46,581 | INFO     | 10710s have passed since pilot start
[2024-05-16 23:21:00] 2024-05-17 03:20:47,063 | INFO     | monitor loop #828: job 0:6207612720 is in state 'finished'
[2024-05-16 23:21:00] 2024-05-17 03:20:47,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 23:21:00] 2024-05-17 03:20:47,838 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-16 23:21:00] 2024-05-17 03:20:47,839 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6207612720/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 23:21:00] 2024-05-17 03:20:47,839 | INFO     | extracted standard info from prmon json
[2024-05-16 23:21:00] 2024-05-17 03:20:47,839 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 23:21:00] 2024-05-17 03:20:47,839 | WARNING  | GPU info not found in prmon json
[2024-05-16 23:21:00] 2024-05-17 03:20:47,840 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 23:21:00] 2024-05-17 03:20:47,840 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 23:21:00] 2024-05-17 03:20:47,842 | INFO     | fitting pss+swap vs Time
[2024-05-16 23:21:00] 2024-05-17 03:20:47,842 | INFO     | model: linear, x: [1715905359.0, 1715905420.0, 1715905481.0, 1715905542.0, 1715905603.0, 1715905664.0, 1715905725.0, 1715905786.0, 1715905847.0, 1715905908.0, 1715
[2024-05-16 23:21:00] 2024-05-17 03:20:47,842 | INFO     | sum of square deviations: 1661798600.0
[2024-05-16 23:21:00] 2024-05-17 03:20:47,843 | INFO     | sum of deviations: 233253058735.0
[2024-05-16 23:21:00] 2024-05-17 03:20:47,843 | INFO     | mean x: 1715910666.0
[2024-05-16 23:21:00] 2024-05-17 03:20:47,843 | INFO     | mean y: 2246029.177142857
[2024-05-16 23:21:00] 2024-05-17 03:20:47,843 | INFO     | -- intersect: -240846080212.34872
[2024-05-16 23:21:00] 2024-05-17 03:20:47,843 | INFO     | intersect: -240846080212.34872
[2024-05-16 23:21:00] 2024-05-17 03:20:47,843 | INFO     | chi2: 9.704145704104315
[2024-05-16 23:21:00] 2024-05-17 03:20:47,843 | INFO     | model: linear, x: [1715905359.0, 1715905420.0, 1715905481.0, 1715905542.0, 1715905603.0, 1715905664.0, 1715905725.0, 1715905786.0, 1715905847.0, 1715905908.0, 1715
[2024-05-16 23:21:00] 2024-05-17 03:20:47,843 | INFO     | sum of square deviations: 1523386702.5
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | sum of deviations: 224911415332.5
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | mean x: 1715910513.5
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | mean y: 2236835.994117647
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | -- intersect: -253333217347.67654
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | intersect: -253333217347.67654
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | chi2: 9.514678224727158
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | current chi2=9.514678224727158 (change=1.9524385263199717 %)
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | right removable region: 169
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | model: linear, x: [1715905664.0, 1715905725.0, 1715905786.0, 1715905847.0, 1715905908.0, 1715905969.0, 1715906030.0, 1715906091.0, 1715906152.0, 1715906213.0, 1715
[2024-05-16 23:21:00] 2024-05-17 03:20:47,844 | INFO     | sum of square deviations: 1523386702.5
[2024-05-16 23:21:00] 2024-05-17 03:20:47,845 | INFO     | sum of deviations: 189049670242.0
[2024-05-16 23:21:00] 2024-05-17 03:20:47,845 | INFO     | mean x: 1715910818.5
[2024-05-16 23:21:00] 2024-05-17 03:20:47,845 | INFO     | mean y: 2294569.494117647
[2024-05-16 23:21:00] 2024-05-17 03:20:47,845 | INFO     | -- intersect: -212939287413.43338
[2024-05-16 23:21:00] 2024-05-17 03:20:47,845 | INFO     | intersect: -212939287413.43338
[2024-05-16 23:21:00] 2024-05-17 03:20:47,845 | INFO     | chi2: 7.222003669486358
[2024-05-16 23:21:00] 2024-05-17 03:20:47,845 | INFO     | current chi2=7.222003669486358 (change=25.578161234410864 %)
[2024-05-16 23:21:00] 2024-05-17 03:20:47,846 | INFO     | model: linear, x: [1715905969.0, 1715906030.0, 1715906091.0, 1715906152.0, 1715906213.0, 1715906274.0, 1715906335.0, 1715906396.0, 1715906457.0, 1715906518.0, 1715
[2024-05-16 23:21:00] 2024-05-17 03:20:47,846 | INFO     | sum of square deviations: 1392881930.0
[2024-05-16 23:21:00] 2024-05-17 03:20:47,846 | INFO     | sum of deviations: 156256615338.0
[2024-05-16 23:21:00] 2024-05-17 03:20:47,846 | INFO     | mean x: 1715910971.0
[2024-05-16 23:21:00] 2024-05-17 03:20:47,846 | INFO     | mean y: 2332895.375757576
[2024-05-16 23:21:00] 2024-05-17 03:20:47,846 | INFO     | -- intersect: -192492403934.0417
[2024-05-16 23:21:00] 2024-05-17 03:20:47,846 | INFO     | intersect: -192492403934.0417
[2024-05-16 23:21:00] 2024-05-17 03:20:47,847 | INFO     | chi2: 6.27125354284041
[2024-05-16 23:21:00] 2024-05-17 03:20:47,847 | INFO     | current chi2=6.27125354284041 (change=13.164630899634632 %)
[2024-05-16 23:21:00] 2024-05-17 03:20:47,847 | INFO     | left removable region: 20
[2024-05-16 23:21:00] 2024-05-17 03:20:47,847 | INFO     | model: linear, x: [1715906579.0, 1715906640.0, 1715906701.0, 1715906762.0, 1715906823.0, 1715906884.0, 1715906945.0, 1715907006.0, 1715907067.0, 1715907128.0, 1715
[2024-05-16 23:21:00] 2024-05-17 03:20:47,847 | INFO     | sum of square deviations: 1025693650.0
[2024-05-16 23:21:00] 2024-05-17 03:20:47,847 | INFO     | sum of deviations: 94910762662.00002
[2024-05-16 23:21:00] 2024-05-17 03:20:47,847 | INFO     | mean x: 1715911093.0
[2024-05-16 23:21:00] 2024-05-17 03:20:47,847 | INFO     | mean y: 2399838.147651007
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | -- intersect: -158776423153.3138
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | intersect: -158776423153.3138
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | chi2: 4.534993740223028
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | -- intersect: -158776423153.3138
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | current memory leak: 92.53 B/s (using 149 data points, chi2=4.53)
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | ..............................
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | . Timing measurements:
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | . get job = 0 s
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | . initial setup = 1 s
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | . payload setup = 4 s
[2024-05-16 23:21:00] 2024-05-17 03:20:47,848 | INFO     | . stage-in = 0 s
[2024-05-16 23:21:00] 2024-05-17 03:20:47,849 | INFO     | . payload execution = 10676 s
[2024-05-16 23:21:00] 2024-05-17 03:20:47,849 | INFO     | . stage-out = 0 s
[2024-05-16 23:21:00] 2024-05-17 03:20:47,849 | INFO     | . log creation = 0 s
[2024-05-16 23:21:00] 2024-05-17 03:20:47,849 | INFO     | ..............................
[2024-05-16 23:21:00] 2024-05-17 03:20:48,330 | INFO     | 
[2024-05-16 23:21:00] 2024-05-17 03:20:48,330 | INFO     | job summary report
[2024-05-16 23:21:00] 2024-05-17 03:20:48,330 | INFO     | --------------------------------------------------
[2024-05-16 23:21:00] 2024-05-17 03:20:48,330 | INFO     | PanDA job id: 6207612720
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | task id: 38776146
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | errors: (none)
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | pilot state: finished 
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | transexitcode: 0
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | exeerrorcode: 0
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | exeerrordiag: 
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | exitcode: 0
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | exitmsg: OK
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | cpuconsumptiontime: 61388 s
[2024-05-16 23:21:00] 2024-05-17 03:20:48,331 | INFO     | nevents: 400
[2024-05-16 23:21:00] 2024-05-17 03:20:48,332 | INFO     | neventsw: 0
[2024-05-16 23:21:00] 2024-05-17 03:20:48,332 | INFO     | pid: 63504
[2024-05-16 23:21:00] 2024-05-17 03:20:48,332 | INFO     | pgrp: 63504
[2024-05-16 23:21:00] 2024-05-17 03:20:48,332 | INFO     | corecount: 8
[2024-05-16 23:21:00] 2024-05-17 03:20:48,332 | INFO     | event service: False
[2024-05-16 23:21:00] 2024-05-17 03:20:48,332 | INFO     | sizes: {0: 2392167, 4: 2392373, 11: 2392401, 10684: 2421379, 10685: 2421378, 10686: 2430394, 10689: 2430578, 10696: 2430748}
[2024-05-16 23:21:00] 2024-05-17 03:20:48,332 | INFO     | --------------------------------------------------
[2024-05-16 23:21:00] 2024-05-17 03:20:48,332 | INFO     | 
[2024-05-16 23:21:00] 2024-05-17 03:20:48,332 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-05-16 23:21:00] 2024-05-17 03:20:48,357 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,357 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,357 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,357 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,357 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,357 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,358 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 23:21:00] 2024-05-17 03:20:48,359 | INFO     | job 6207612720 has completed (purged errors)
[2024-05-16 23:21:00] 2024-05-17 03:20:48,359 | INFO     | overall cleanup function is called
[2024-05-16 23:21:00] 2024-05-17 03:20:49,366 | INFO     | --- collectZombieJob: --- 10, [63504]
[2024-05-16 23:21:00] 2024-05-17 03:20:49,367 | INFO     | zombie collector waiting for pid 63504
[2024-05-16 23:21:00] 2024-05-17 03:20:49,367 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 23:21:00] 2024-05-17 03:20:50,372 | INFO     | collected zombie processes
[2024-05-16 23:21:00] 2024-05-17 03:20:50,372 | INFO     | will now attempt to kill all subprocesses of pid=63504
[2024-05-16 23:21:00] 2024-05-17 03:20:50,545 | INFO     | process IDs to be killed: [63504] (in reverse order)
[2024-05-16 23:21:00] 2024-05-17 03:20:50,661 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 23:21:00] 2024-05-17 03:20:50,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 23:21:00] 2024-05-17 03:20:50,673 | INFO     | did not find any defunct processes belonging to 63504
[2024-05-16 23:21:00] 2024-05-17 03:20:50,684 | INFO     | did not find any defunct processes belonging to 63504
[2024-05-16 23:21:00] 2024-05-17 03:20:50,684 | INFO     | ready for new job
[2024-05-16 23:21:00] 2024-05-17 03:20:50,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 23:21:00] 2024-05-17 03:20:50,686 | INFO     | *************************************
[2024-05-16 23:21:00] 2024-05-17 03:20:50,686 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 23:21:00] 2024-05-17 03:20:50,686 | INFO     | *************************************
[2024-05-16 23:21:00] 2024-05-17 03:20:50,686 | INFO     | 
[2024-05-16 23:21:00] 2024-05-17 03:20:50,691 | INFO     | architecture information:
[2024-05-16 23:21:00] 2024-05-17 03:20:50,691 | INFO     | executing command: cat /etc/os-release
[2024-05-16 23:21:00] 2024-05-17 03:20:50,710 | INFO     | cat /etc/os-release:
[2024-05-16 23:21:00] NAME="CentOS Linux"
[2024-05-16 23:21:00] VERSION="7 (Core)"
[2024-05-16 23:21:00] ID="centos"
[2024-05-16 23:21:00] ID_LIKE="rhel fedora"
[2024-05-16 23:21:00] VERSION_ID="7"
[2024-05-16 23:21:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 23:21:00] ANSI_COLOR="0;31"
[2024-05-16 23:21:00] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 23:21:00] HOME_URL="https://www.centos.org/"
[2024-05-16 23:21:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 23:21:00] 
[2024-05-16 23:21:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 23:21:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 23:21:00] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 23:21:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 23:21:00] 
[2024-05-16 23:21:00] 2024-05-17 03:20:50,710 | INFO     | *************************************
[2024-05-16 23:21:00] 2024-05-17 03:20:51,214 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-05-16 23:21:00] 2024-05-17 03:20:51,254 | INFO     | sufficient remaining disk space (98596552704 B)
[2024-05-16 23:21:00] 2024-05-17 03:20:51,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 23:21:00] 2024-05-17 03:20:51,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 23:21:00] 2024-05-17 03:20:51,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 23:21:00] 2024-05-17 03:20:51,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 23:21:00] 2024-05-17 03:20:51,256 | INFO     | aborting loop
[2024-05-16 23:21:00] 2024-05-17 03:20:51,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 23:21:00] 2024-05-17 03:20:51,373 | INFO     | all data control threads have been joined
[2024-05-16 23:21:00] 2024-05-17 03:20:51,597 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 23:21:00] 2024-05-17 03:20:51,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 23:21:00] 2024-05-17 03:20:51,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 23:21:00] 2024-05-17 03:20:51,915 | INFO     | all payload control threads have been joined
[2024-05-16 23:21:00] 2024-05-17 03:20:52,260 | INFO     | [job] retrieve thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:52,261 | INFO     | [job] job monitor thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:52,354 | INFO     | [data] copytool_in thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:52,378 | INFO     | [data] control thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:52,430 | INFO     | [job] validate thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:52,575 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:52,601 | INFO     | all job control threads have been joined
[2024-05-16 23:21:00] 2024-05-17 03:20:52,701 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:52,916 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 23:21:00] 2024-05-17 03:20:52,920 | INFO     | [payload] control thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:53,241 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:53,261 | INFO     | [data] copytool_out thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:53,359 | INFO     | [payload] validate_post thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:53,361 | INFO     | [payload] failed_post thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:53,569 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:53,606 | INFO     | [job] control thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:53,921 | INFO     | [job] queue monitor thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:55,262 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 23:21:00] 2024-05-17 03:20:55,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140144504325952)>', '<ExcThread(monitor, started 140144061421312)>']
[2024-05-16 23:21:00] 2024-05-17 03:20:55,617 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 23:21:00] 2024-05-17 03:20:55,617 | INFO     | [monitor] control thread has ended
[2024-05-16 23:21:00] 2024-05-17 03:21:00,399 | INFO     | all workflow threads have been joined
[2024-05-16 23:21:00] 2024-05-17 03:21:00,399 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 23:21:00] 2024-05-17 03:21:00,399 | INFO     | traces error code: 0
[2024-05-16 23:21:00] 2024-05-17 03:21:00,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 23:21:00] 2024-05-17 03:21:00,468 [wrapper] ==== pilot stdout END ====
[2024-05-16 23:21:00] 2024-05-17 03:21:00,471 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 23:21:00] 2024-05-17 03:21:00,473 [wrapper] pilotpid: 55204
[2024-05-16 23:21:00] 2024-05-17 03:21:00,475 [wrapper] Pilot exit status: 0
[2024-05-16 23:21:00] 2024-05-17 03:21:00,484 [wrapper] pandaids: 6207612720
[2024-05-16 23:21:00] 2024-05-17 03:21:00,567 [wrapper] cleanup: SIGTERM to supervisor_pilot 204219 55205
[2024-05-16 23:21:00] 2024-05-17 03:21:00,569 [wrapper] Test setup, not cleaning
[2024-05-16 23:21:00] 2024-05-17 03:21:00,571 [wrapper] ==== wrapper stdout END ====
[2024-05-16 23:21:00] 2024-05-17 03:21:00,575 [wrapper] ==== wrapper stderr END ====
[2024-05-16 23:21:00] 2024-05-17 03:21:00,579 [wrapper] apfmon messages muted
[2024-05-16 23:21:00]  *** Error codes and diagnostics ***
[2024-05-16 23:21:00]     "exeErrorCode": 0,
[2024-05-16 23:21:00]     "exeErrorDiag": "",
[2024-05-16 23:21:00]     "pilotErrorCode": 0,
[2024-05-16 23:21:00]     "pilotErrorDiag": "",
[2024-05-16 23:21:00]  *** Listing of results directory ***
[2024-05-16 23:21:00] total 870924
[2024-05-16 23:21:00] -rwx------ 1 boincer umatlas     32251 May 16 17:17 runpilot2-wrapper.sh
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas    467845 May 16 17:17 pilot3.tar.gz
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas      5633 May 16 17:17 queuedata.json
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas       100 May 16 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 23:21:00] -rwxr-xr-x 1 boincer umatlas      7986 May 16 20:21 run_atlas
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas       105 May 16 20:21 job.xml
[2024-05-16 23:21:00] -rw-r--r-- 2 boincer umatlas 610178615 May 16 20:22 EVNT.38776140._000006.pool.root.1
[2024-05-16 23:21:00] -rw-r--r-- 2 boincer umatlas     17537 May 16 20:22 start_atlas.sh
[2024-05-16 23:21:00] drwxrwx--x 2 boincer umatlas      4096 May 16 20:22 shared
[2024-05-16 23:21:00] -rw-r--r-- 2 boincer umatlas    479995 May 16 20:22 input.tar.gz
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas         0 May 16 20:22 boinc_lockfile
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas      2610 May 16 20:22 pandaJob.out
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas       467 May 16 20:22 setup.sh.local
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas   1019310 May 16 20:22 agis_schedconf.cvmfs.json
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas         0 May 16 20:22 agis_ddmendpoints.agis.ALL.json
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas   1324701 May 16 20:22 cric_ddmendpoints.json
[2024-05-16 23:21:00] drwx------ 4 boincer umatlas      4096 May 16 20:22 pilot3
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas      6383 May 16 23:09 init_data.xml
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas 275291319 May 16 23:19 HITS.38776146._014605.pool.root.1
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas       532 May 16 23:20 boinc_task_state.xml
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas      1060 May 16 23:20 memory_monitor_summary.json
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas    358165 May 16 23:20 log.38776146._014605.job.log.tgz.1
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas        95 May 16 23:20 pilot_heartbeat.json
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas      8192 May 16 23:20 boinc_mmap_file
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas        28 May 16 23:20 wrapper_checkpoint.txt
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas      7764 May 16 23:20 heartbeat.json
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas      4211 May 16 23:21 pilotlog.txt
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas   1051164 May 16 23:21 log.38776146._014605.job.log.1
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas       357 May 16 23:21 output.list
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas       620 May 16 23:21 runtime_log
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas   1433600 May 16 23:21 result.tar.gz
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas     11410 May 16 23:21 runtime_log.err
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas       649 May 16 23:21 IjaKDmGfxR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmyQZKDmlOzO9n.diag
[2024-05-16 23:21:00] -rw-r--r-- 1 boincer umatlas     21593 May 16 23:21 stderr.txt
[2024-05-16 23:21:00] HITS file was successfully produced:
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas 275291319 May 16 23:19 shared/HITS.pool.root.1
[2024-05-16 23:21:00]  *** Contents of shared directory: ***
[2024-05-16 23:21:00] total 866620
[2024-05-16 23:21:00] -rw-r--r-- 2 boincer umatlas 610178615 May 16 20:22 ATLAS.root_0
[2024-05-16 23:21:00] -rw-r--r-- 2 boincer umatlas     17537 May 16 20:22 start_atlas.sh
[2024-05-16 23:21:00] -rw-r--r-- 2 boincer umatlas    479995 May 16 20:22 input.tar.gz
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas 275291319 May 16 23:19 HITS.pool.root.1
[2024-05-16 23:21:00] -rw------- 1 boincer umatlas   1433600 May 16 23:21 result.tar.gz
23:21:02 (50992): run_atlas exited; CPU time 61225.912499
23:21:02 (50992): called boinc_finish(0)

</stderr_txt>
]]>

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