Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
09:28:43 (135482): wrapper (7.7.26015): starting
09:28:43 (135482): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 09:28:43] Arguments: --nthreads 12
[2024-05-17 09:28:43] Threads: 12
[2024-05-17 09:28:43] Checking for CVMFS
[2024-05-17 09:28:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 09:28:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 09:28:44] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 09:28:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 09:28:44] 2.10.1.0 276469 183721 143896 132848 3 60 33173871 45568000 3811 130560 0 627226601 99.753 414347586 3034 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 09:28:44] CVMFS is ok
[2024-05-17 09:28:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 09:28:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 09:28:44] Further information can be found at the LHC@home message board.
[2024-05-17 09:28:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 09:28:44] Checking for apptainer binary...
[2024-05-17 09:28:44] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 09:28:44] Running /usr/bin/apptainer --version
[2024-05-17 09:28:44] apptainer version 1.1.8-1.el7
[2024-05-17 09:28:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 09:28:45] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0025.triumf.lcg
[2024-05-17 09:28:45] apptainer works
[2024-05-17 09:28:45] Set ATHENA_PROC_NUMBER=12
[2024-05-17 09:28:45] Set ATHENA_CORE_NUMBER=12
[2024-05-17 09:28:45] Starting ATLAS job with PandaID=6207579294
[2024-05-17 09:28:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 11:16:18]  *** The last 200 lines of the pilot log: ***
[2024-05-17 11:16:18] 2024-05-17 18:16:02,387 | INFO     | current chi2=5.337383800843995 (change=0.5791149140792542 %)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,387 | INFO     | right removable region: 99
[2024-05-17 11:16:18] 2024-05-17 18:16:02,388 | INFO     | model: linear, x: [1715963668.0, 1715963729.0, 1715963790.0, 1715963851.0, 1715963912.0, 1715963973.0, 1715964034.0, 1715964095.0, 1715964156.0, 1715964217.0, 1715
[2024-05-17 11:16:18] 2024-05-17 18:16:02,388 | INFO     | sum of square deviations: 310052325.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,388 | INFO     | sum of deviations: 22973600644.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,389 | INFO     | mean x: 1715966687.5
[2024-05-17 11:16:18] 2024-05-17 18:16:02,389 | INFO     | mean y: 2737505.42
[2024-05-17 11:16:18] 2024-05-17 18:16:02,389 | INFO     | -- intersect: -127143328556.27635
[2024-05-17 11:16:18] 2024-05-17 18:16:02,389 | INFO     | intersect: -127143328556.27635
[2024-05-17 11:16:18] 2024-05-17 18:16:02,389 | INFO     | chi2: 2.6142501673441445
[2024-05-17 11:16:18] 2024-05-17 18:16:02,389 | INFO     | current chi2=2.6142501673441445 (change=51.30365827687493 %)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,389 | INFO     | model: linear, x: [1715963973.0, 1715964034.0, 1715964095.0, 1715964156.0, 1715964217.0, 1715964278.0, 1715964339.0, 1715964400.0, 1715964461.0, 1715964522.0, 1715
[2024-05-17 11:16:18] 2024-05-17 18:16:02,390 | INFO     | sum of square deviations: 265828240.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,390 | INFO     | sum of deviations: 435886602.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,390 | INFO     | mean x: 1715966840.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,390 | INFO     | mean y: 2815275.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,391 | INFO     | -- intersect: -2810907431.9339123
[2024-05-17 11:16:18] 2024-05-17 18:16:02,391 | INFO     | intersect: -2810907431.9339123
[2024-05-17 11:16:18] 2024-05-17 18:16:02,391 | INFO     | chi2: 0.9401379396465419
[2024-05-17 11:16:18] 2024-05-17 18:16:02,391 | INFO     | current chi2=0.9401379396465419 (change=64.03795048422462 %)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,391 | INFO     | model: linear, x: [1715964278.0, 1715964339.0, 1715964400.0, 1715964461.0, 1715964522.0, 1715964583.0, 1715964644.0, 1715964705.0, 1715964766.0, 1715964827.0, 1715
[2024-05-17 11:16:18] 2024-05-17 18:16:02,391 | INFO     | sum of square deviations: 226022842.5
[2024-05-17 11:16:18] 2024-05-17 18:16:02,392 | INFO     | sum of deviations: -12943796271.499998
[2024-05-17 11:16:18] 2024-05-17 18:16:02,392 | INFO     | mean x: 1715966992.5
[2024-05-17 11:16:18] 2024-05-17 18:16:02,392 | INFO     | mean y: 2865774.988888889
[2024-05-17 11:16:18] 2024-05-17 18:16:02,392 | INFO     | -- intersect: 98272257106.70158
[2024-05-17 11:16:18] 2024-05-17 18:16:02,392 | INFO     | intersect: 98272257106.70158
[2024-05-17 11:16:18] 2024-05-17 18:16:02,392 | INFO     | chi2: 0.110556540719376
[2024-05-17 11:16:18] 2024-05-17 18:16:02,393 | INFO     | current chi2=0.110556540719376 (change=88.24039153648651 %)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,393 | INFO     | model: linear, x: [1715964583.0, 1715964644.0, 1715964705.0, 1715964766.0, 1715964827.0, 1715964888.0, 1715964949.0, 1715965010.0, 1715965071.0, 1715965132.0, 1715
[2024-05-17 11:16:18] 2024-05-17 18:16:02,393 | INFO     | sum of square deviations: 190403570.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,393 | INFO     | sum of deviations: -13150302774.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,393 | INFO     | mean x: 1715967145.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,394 | INFO     | mean y: 2866337.9176470586
[2024-05-17 11:16:18] 2024-05-17 18:16:02,394 | INFO     | -- intersect: 118516860098.57224
[2024-05-17 11:16:18] 2024-05-17 18:16:02,394 | INFO     | intersect: 118516860098.57224
[2024-05-17 11:16:18] 2024-05-17 18:16:02,394 | INFO     | chi2: 0.06718620375038244
[2024-05-17 11:16:18] 2024-05-17 18:16:02,394 | INFO     | current chi2=0.06718620375038244 (change=39.2291009530407 %)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,394 | INFO     | model: linear, x: [1715964888.0, 1715964949.0, 1715965010.0, 1715965071.0, 1715965132.0, 1715965193.0, 1715965254.0, 1715965315.0, 1715965376.0, 1715965437.0, 1715
[2024-05-17 11:16:18] 2024-05-17 18:16:02,394 | INFO     | sum of square deviations: 158737860.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,395 | INFO     | sum of deviations: -10921928549.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,395 | INFO     | mean x: 1715967297.5
[2024-05-17 11:16:18] 2024-05-17 18:16:02,395 | INFO     | mean y: 2855569.475
[2024-05-17 11:16:18] 2024-05-17 18:16:02,395 | INFO     | -- intersect: 118069662163.16113
[2024-05-17 11:16:18] 2024-05-17 18:16:02,395 | INFO     | intersect: 118069662163.16113
[2024-05-17 11:16:18] 2024-05-17 18:16:02,395 | INFO     | chi2: 0.0669627367859164
[2024-05-17 11:16:18] 2024-05-17 18:16:02,396 | INFO     | current chi2=0.0669627367859164 (change=0.3326084106437823 %)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,396 | INFO     | left removable region: 50
[2024-05-17 11:16:18] 2024-05-17 18:16:02,396 | INFO     | model: linear, x: [1715966413.0, 1715966474.0, 1715966535.0, 1715966596.0, 1715966657.0, 1715966718.0, 1715966779.0, 1715966840.0, 1715966901.0, 1715966962.0, 1715
[2024-05-17 11:16:18] 2024-05-17 18:16:02,396 | INFO     | sum of square deviations: 36465800.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,396 | INFO     | sum of deviations: 130011313.00000003
[2024-05-17 11:16:18] 2024-05-17 18:16:02,396 | INFO     | mean x: 1715967877.0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,396 | INFO     | mean y: 2776693.0408163266
[2024-05-17 11:16:18] 2024-05-17 18:16:02,396 | INFO     | -- intersect: -6115153991.452395
[2024-05-17 11:16:18] 2024-05-17 18:16:02,397 | INFO     | intersect: -6115153991.452395
[2024-05-17 11:16:18] 2024-05-17 18:16:02,397 | INFO     | chi2: 8.162877165369014e-06
[2024-05-17 11:16:18] 2024-05-17 18:16:02,397 | INFO     | -- intersect: -6115153991.452395
[2024-05-17 11:16:18] 2024-05-17 18:16:02,397 | INFO     | current memory leak: 3.57 B/s (using 49 data points, chi2=0.00)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | ..............................
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | . Timing measurements:
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | . get job = 0 s
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | . initial setup = 1 s
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | . payload setup = 6 s
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | . stage-in = 0 s
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | . payload execution = 6391 s
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | . stage-out = 0 s
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | . log creation = 0 s
[2024-05-17 11:16:18] 2024-05-17 18:16:02,398 | INFO     | ..............................
[2024-05-17 11:16:18] 2024-05-17 18:16:02,481 | INFO     | 
[2024-05-17 11:16:18] 2024-05-17 18:16:02,481 | INFO     | job summary report
[2024-05-17 11:16:18] 2024-05-17 18:16:02,481 | INFO     | --------------------------------------------------
[2024-05-17 11:16:18] 2024-05-17 18:16:02,481 | INFO     | PanDA job id: 6207579294
[2024-05-17 11:16:18] 2024-05-17 18:16:02,481 | INFO     | task id: 38920995
[2024-05-17 11:16:18] 2024-05-17 18:16:02,481 | INFO     | errors: (none)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,482 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 11:16:18] 2024-05-17 18:16:02,482 | INFO     | pilot state: finished 
[2024-05-17 11:16:18] 2024-05-17 18:16:02,482 | INFO     | transexitcode: 0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,482 | INFO     | exeerrorcode: 0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,482 | INFO     | exeerrordiag: 
[2024-05-17 11:16:18] 2024-05-17 18:16:02,482 | INFO     | exitcode: 0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,482 | INFO     | exitmsg: OK
[2024-05-17 11:16:18] 2024-05-17 18:16:02,482 | INFO     | cpuconsumptiontime: 64384 s
[2024-05-17 11:16:18] 2024-05-17 18:16:02,482 | INFO     | nevents: 400
[2024-05-17 11:16:18] 2024-05-17 18:16:02,483 | INFO     | neventsw: 0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,483 | INFO     | pid: 146077
[2024-05-17 11:16:18] 2024-05-17 18:16:02,483 | INFO     | pgrp: 146077
[2024-05-17 11:16:18] 2024-05-17 18:16:02,483 | INFO     | corecount: 12
[2024-05-17 11:16:18] 2024-05-17 18:16:02,483 | INFO     | event service: False
[2024-05-17 11:16:18] 2024-05-17 18:16:02,483 | INFO     | sizes: {0: 2392122, 5: 2392328, 11: 2392384, 6400: 2419404, 6401: 2419403, 6403: 2428413, 6405: 2428597, 6409: 2428767}
[2024-05-17 11:16:18] 2024-05-17 18:16:02,483 | INFO     | --------------------------------------------------
[2024-05-17 11:16:18] 2024-05-17 18:16:02,483 | INFO     | 
[2024-05-17 11:16:18] 2024-05-17 18:16:02,483 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 11:16:18] 2024-05-17 18:16:02,515 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,515 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,515 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,515 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,517 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,517 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 11:16:18] 2024-05-17 18:16:02,517 | INFO     | job 6207579294 has completed (purged errors)
[2024-05-17 11:16:18] 2024-05-17 18:16:02,517 | INFO     | overall cleanup function is called
[2024-05-17 11:16:18] 2024-05-17 18:16:03,522 | INFO     | --- collectZombieJob: --- 10, [146077]
[2024-05-17 11:16:18] 2024-05-17 18:16:03,523 | INFO     | zombie collector waiting for pid 146077
[2024-05-17 11:16:18] 2024-05-17 18:16:03,523 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 11:16:18] 2024-05-17 18:16:04,529 | INFO     | collected zombie processes
[2024-05-17 11:16:18] 2024-05-17 18:16:04,529 | INFO     | will now attempt to kill all subprocesses of pid=146077
[2024-05-17 11:16:18] 2024-05-17 18:16:04,648 | INFO     | process IDs to be killed: [146077] (in reverse order)
[2024-05-17 11:16:18] 2024-05-17 18:16:04,768 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 11:16:18] 2024-05-17 18:16:04,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 11:16:18] 2024-05-17 18:16:04,776 | INFO     | did not find any defunct processes belonging to 146077
[2024-05-17 11:16:18] 2024-05-17 18:16:04,783 | INFO     | did not find any defunct processes belonging to 146077
[2024-05-17 11:16:18] 2024-05-17 18:16:04,783 | INFO     | ready for new job
[2024-05-17 11:16:18] 2024-05-17 18:16:04,783 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 11:16:18] 2024-05-17 18:16:04,785 | INFO     | *************************************
[2024-05-17 11:16:18] 2024-05-17 18:16:04,785 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 11:16:18] 2024-05-17 18:16:04,785 | INFO     | *************************************
[2024-05-17 11:16:18] 2024-05-17 18:16:04,785 | INFO     | 
[2024-05-17 11:16:18] 2024-05-17 18:16:04,790 | INFO     | architecture information:
[2024-05-17 11:16:18] 2024-05-17 18:16:04,790 | INFO     | executing command: cat /etc/os-release
[2024-05-17 11:16:18] 2024-05-17 18:16:04,813 | INFO     | cat /etc/os-release:
[2024-05-17 11:16:18] NAME="CentOS Linux"
[2024-05-17 11:16:18] VERSION="7 (Core)"
[2024-05-17 11:16:18] ID="centos"
[2024-05-17 11:16:18] ID_LIKE="rhel fedora"
[2024-05-17 11:16:18] VERSION_ID="7"
[2024-05-17 11:16:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 11:16:18] ANSI_COLOR="0;31"
[2024-05-17 11:16:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 11:16:18] HOME_URL="https://www.centos.org/"
[2024-05-17 11:16:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 11:16:18] 
[2024-05-17 11:16:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 11:16:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 11:16:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 11:16:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 11:16:18] 
[2024-05-17 11:16:18] 2024-05-17 18:16:04,813 | INFO     | *************************************
[2024-05-17 11:16:18] 2024-05-17 18:16:05,317 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 11:16:18] 2024-05-17 18:16:05,343 | INFO     | sufficient remaining disk space (2234796474368 B)
[2024-05-17 11:16:18] 2024-05-17 18:16:05,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 11:16:18] 2024-05-17 18:16:05,344 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 11:16:18] 2024-05-17 18:16:05,656 | INFO     | all job control threads have been joined
[2024-05-17 11:16:18] 2024-05-17 18:16:05,787 | INFO     | all data control threads have been joined
[2024-05-17 11:16:18] 2024-05-17 18:16:05,829 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-17 11:16:18] 2024-05-17 18:16:05,829 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-17 11:16:18] 2024-05-17 18:16:05,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 11:16:18] 2024-05-17 18:16:05,830 | INFO     | will abort loop
[2024-05-17 11:16:18] 2024-05-17 18:16:06,000 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 11:16:18] 2024-05-17 18:16:06,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 11:16:18] 2024-05-17 18:16:06,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 11:16:18] 2024-05-17 18:16:06,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 11:16:18] 2024-05-17 18:16:06,350 | INFO     | [job] retrieve thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:06,655 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:06,661 | INFO     | [job] control thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:06,689 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:06,768 | INFO     | all payload control threads have been joined
[2024-05-17 11:16:18] 2024-05-17 18:16:06,795 | INFO     | [data] control thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:06,835 | INFO     | [job] job monitor thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:06,944 | INFO     | [data] copytool_in thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:07,158 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:07,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 11:16:18] 2024-05-17 18:16:07,507 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:07,702 | INFO     | [payload] failed_post thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:07,774 | INFO     | [job] validate thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:07,774 | INFO     | [payload] control thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:07,925 | INFO     | [payload] validate_post thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:08,288 | INFO     | [data] copytool_out thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:08,499 | INFO     | [job] queue monitor thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:08,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 11:16:18] 2024-05-17 18:16:12,522 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 11:16:18] 2024-05-17 18:16:12,673 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708769920832)>', '<ExcThread(monitor, started 140708329535232)>']
[2024-05-17 11:16:18] 2024-05-17 18:16:13,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 11:16:18] 2024-05-17 18:16:13,040 | INFO     | [monitor] control thread has ended
[2024-05-17 11:16:18] 2024-05-17 18:16:17,699 | INFO     | all workflow threads have been joined
[2024-05-17 11:16:18] 2024-05-17 18:16:17,699 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 11:16:18] 2024-05-17 18:16:17,699 | INFO     | traces error code: 0
[2024-05-17 11:16:18] 2024-05-17 18:16:17,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 11:16:18] 2024-05-17 18:16:17,794 [wrapper] ==== pilot stdout END ====
[2024-05-17 11:16:18] 2024-05-17 18:16:17,799 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 11:16:18] 2024-05-17 18:16:17,803 [wrapper] pilotpid: 139657
[2024-05-17 11:16:18] 2024-05-17 18:16:17,807 [wrapper] Pilot exit status: 0
[2024-05-17 11:16:18] 2024-05-17 18:16:17,820 [wrapper] pandaids: 6207579294
[2024-05-17 11:16:18] 2024-05-17 18:16:17,889 [wrapper] cleanup: SIGTERM to supervisor_pilot 217857 139658
[2024-05-17 11:16:18] 2024-05-17 18:16:17,893 [wrapper] Test setup, not cleaning
[2024-05-17 11:16:18] 2024-05-17 18:16:17,896 [wrapper] ==== wrapper stdout END ====
[2024-05-17 11:16:18] 2024-05-17 18:16:17,899 [wrapper] ==== wrapper stderr END ====
[2024-05-17 11:16:18] 2024-05-17 18:16:17,905 [wrapper] apfmon messages muted
[2024-05-17 11:16:18]  *** Error codes and diagnostics ***
[2024-05-17 11:16:18]     "exeErrorCode": 0,
[2024-05-17 11:16:18]     "exeErrorDiag": "",
[2024-05-17 11:16:18]     "pilotErrorCode": 0,
[2024-05-17 11:16:18]     "pilotErrorDiag": "",
[2024-05-17 11:16:18]  *** Listing of results directory ***
[2024-05-17 11:16:18] total 968084
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc    467845 May 16 12:19 pilot3.tar.gz
[2024-05-17 11:16:18] -rwx------ 1 boinc boinc     32251 May 16 12:46 runpilot2-wrapper.sh
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc      5633 May 16 12:46 queuedata.json
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc       100 May 17 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 11:16:18] -rwxr-xr-x 1 boinc boinc      7986 May 17 09:28 run_atlas
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc       105 May 17 09:28 job.xml
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc      6625 May 17 09:28 init_data.xml
[2024-05-17 11:16:18] -rw-r--r-- 2 boinc boinc 631982426 May 17 09:28 EVNT.38776180._000169.pool.root.1
[2024-05-17 11:16:18] -rw-r--r-- 2 boinc boinc     17537 May 17 09:28 start_atlas.sh
[2024-05-17 11:16:18] drwxrwx--x 2 boinc boinc      4096 May 17 09:28 shared
[2024-05-17 11:16:18] -rw-r--r-- 2 boinc boinc    479999 May 17 09:28 input.tar.gz
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc         0 May 17 09:28 boinc_lockfile
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc      2614 May 17 09:28 pandaJob.out
[2024-05-17 11:16:18] -rw------- 1 boinc boinc       424 May 17 09:28 setup.sh.local
[2024-05-17 11:16:18] -rw------- 1 boinc boinc   1019452 May 17 09:28 agis_schedconf.cvmfs.json
[2024-05-17 11:16:18] -rw------- 1 boinc boinc         0 May 17 09:28 agis_ddmendpoints.agis.ALL.json
[2024-05-17 11:16:18] -rw------- 1 boinc boinc   1324701 May 17 09:28 cric_ddmendpoints.json
[2024-05-17 11:16:18] drwx------ 4 boinc boinc      4096 May 17 09:28 pilot3
[2024-05-17 11:16:18] -rw------- 1 boinc boinc        95 May 17 11:15 pilot_heartbeat.json
[2024-05-17 11:16:18] -rw------- 1 boinc boinc 353749807 May 17 11:15 HITS.38920995._004323.pool.root.1
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc       530 May 17 11:15 boinc_task_state.xml
[2024-05-17 11:16:18] -rw------- 1 boinc boinc      1046 May 17 11:15 memory_monitor_summary.json
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc      8192 May 17 11:15 boinc_mmap_file
[2024-05-17 11:16:18] -rw------- 1 boinc boinc    385997 May 17 11:15 log.38920995._004323.job.log.tgz.1
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc        27 May 17 11:15 wrapper_checkpoint.txt
[2024-05-17 11:16:18] -rw------- 1 boinc boinc      7759 May 17 11:16 heartbeat.json
[2024-05-17 11:16:18] -rw------- 1 boinc boinc      4396 May 17 11:16 pilotlog.txt
[2024-05-17 11:16:18] -rw------- 1 boinc boinc    641302 May 17 11:16 log.38920995._004323.job.log.1
[2024-05-17 11:16:18] -rw------- 1 boinc boinc       357 May 17 11:16 output.list
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc       620 May 17 11:16 runtime_log
[2024-05-17 11:16:18] -rw------- 1 boinc boinc   1044480 May 17 11:16 result.tar.gz
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc     11286 May 17 11:16 runtime_log.err
[2024-05-17 11:16:18] -rw------- 1 boinc boinc       651 May 17 11:16 m3RMDm6EwR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmvcKKDmqPUCqn.diag
[2024-05-17 11:16:18] -rw-r--r-- 1 boinc boinc     21869 May 17 11:16 stderr.txt
[2024-05-17 11:16:18] HITS file was successfully produced:
[2024-05-17 11:16:18] -rw------- 1 boinc boinc 353749807 May 17 11:15 shared/HITS.pool.root.1
[2024-05-17 11:16:18]  *** Contents of shared directory: ***
[2024-05-17 11:16:18] total 964152
[2024-05-17 11:16:18] -rw-r--r-- 2 boinc boinc 631982426 May 17 09:28 ATLAS.root_0
[2024-05-17 11:16:18] -rw-r--r-- 2 boinc boinc     17537 May 17 09:28 start_atlas.sh
[2024-05-17 11:16:18] -rw-r--r-- 2 boinc boinc    479999 May 17 09:28 input.tar.gz
[2024-05-17 11:16:18] -rw------- 1 boinc boinc 353749807 May 17 11:15 HITS.pool.root.1
[2024-05-17 11:16:18] -rw------- 1 boinc boinc   1044480 May 17 11:16 result.tar.gz
11:16:19 (135482): run_atlas exited; CPU time 64240.168734
11:16:19 (135482): called boinc_finish(0)

</stderr_txt>
]]>

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