Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:32:42 (62462): wrapper (7.7.26015): starting
05:32:42 (62462): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 05:32:42] Arguments: --nthreads 12
[2024-05-17 05:32:42] Threads: 12
[2024-05-17 05:32:42] Checking for CVMFS
[2024-05-17 05:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 05:32:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 05:32:42] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 05:32:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 05:32:42] 2.10.1.0 226310 183480 138808 132841 1 60 43095899 45568000 3734 130560 0 619924206 99.734 447282072 14628 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 05:32:42] CVMFS is ok
[2024-05-17 05:32:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 05:32:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 05:32:42] Further information can be found at the LHC@home message board.
[2024-05-17 05:32:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 05:32:42] Checking for apptainer binary...
[2024-05-17 05:32:42] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 05:32:42] Running /usr/bin/apptainer --version
[2024-05-17 05:32:42] apptainer version 1.1.8-1.el7
[2024-05-17 05:32:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 05:32:43] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0046.triumf.lcg
[2024-05-17 05:32:43] apptainer works
[2024-05-17 05:32:43] Set ATHENA_PROC_NUMBER=12
[2024-05-17 05:32:43] Set ATHENA_CORE_NUMBER=12
[2024-05-17 05:32:43] Starting ATLAS job with PandaID=6207572785
[2024-05-17 05:32:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 06:21:11]  *** The last 200 lines of the pilot log: ***
[2024-05-17 06:21:11]  guid=584645d5-c4b0-4683-ad64-6de2fb26bc40
[2024-05-17 06:21:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 06:21:11]  is_tar=False
[2024-05-17 06:21:11]  lfn=log.38776104._011427.job.log.tgz.1
[2024-05-17 06:21:11]  mtime=0
[2024-05-17 06:21:11]  protocol_id=None
[2024-05-17 06:21:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 06:21:11]  replicas=None
[2024-05-17 06:21:11]  scope=mc23_13p6TeV
[2024-05-17 06:21:11]  status=None
[2024-05-17 06:21:11]  status_code=0
[2024-05-17 06:21:11]  storage_token=
[2024-05-17 06:21:11]  surl=/home/boinc/slots/0/PanDA_Pilot-6207572785/log.38776104._011427.job.log.tgz.1
[2024-05-17 06:21:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/17/log.38776104._011427.job.log.tgz.1
[2024-05-17 06:21:11]  workdir=None
[2024-05-17 06:21:11] ]
[2024-05-17 06:21:11] 2024-05-17 13:20:45,885 | INFO     | transferring file log.38776104._011427.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207572785/log.38776104._011427.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 06:21:11] 2024-05-17 13:20:45,885 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207572785/log.38776104._011427.job.log.tgz.1 /home/boinc/slots/0/log.38776104._011427.job.log.t
[2024-05-17 06:21:11] 2024-05-17 13:20:46,008 | WARNING  | process 73098 is no longer using CPU - aborting
[2024-05-17 06:21:11] 2024-05-17 13:20:46,008 | INFO     | will not send any job update
[2024-05-17 06:21:11] 2024-05-17 13:20:46,035 | INFO     | adding to output.list: log.38776104._011427.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d0/17/log.38776104._011427.job.log.tg
[2024-05-17 06:21:11] 2024-05-17 13:20:46,036 | INFO     | summary of transferred files:
[2024-05-17 06:21:11] 2024-05-17 13:20:46,037 | INFO     |  -- lfn=log.38776104._011427.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 06:21:11] 2024-05-17 13:20:46,037 | INFO     | stage-out finished correctly
[2024-05-17 06:21:11] 2024-05-17 13:20:46,370 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 06:21:11] 2024-05-17 13:20:46,456 | INFO     | job 6207572785 has state=finished
[2024-05-17 06:21:11] 2024-05-17 13:20:46,456 | INFO     | preparing for final server update for job 6207572785 in state='finished'
[2024-05-17 06:21:11] 2024-05-17 13:20:46,760 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-17 06:21:11] 2024-05-17 13:20:46,761 | INFO     | this job has now completed (state=finished)
[2024-05-17 06:21:11] 2024-05-17 13:20:46,761 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 06:21:11] 2024-05-17 13:20:46,761 | INFO     | job 6207572785 has finished - writing final server update
[2024-05-17 06:21:11] 2024-05-17 13:20:46,761 | INFO     | total number of processed events: 400 (read)
[2024-05-17 06:21:11] 2024-05-17 13:20:46,768 | INFO     | executing command: lscpu
[2024-05-17 06:21:11] 2024-05-17 13:20:46,836 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 06:21:11] 2024-05-17 13:20:46,837 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 06:21:11] 2024-05-17 13:20:46,898 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 06:21:11] 2024-05-17 13:20:48,512 | INFO     | monitor loop #229: job 0:6207572785 is in state 'finished'
[2024-05-17 06:21:11] 2024-05-17 13:20:48,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 06:21:11] 2024-05-17 13:20:51,015 | INFO     | monitor loop #230: job 0:6207572785 is in state 'finished'
[2024-05-17 06:21:11] 2024-05-17 13:20:51,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 06:21:11] 2024-05-17 13:20:51,266 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 06:21:11] 2024-05-17 13:20:51,266 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207572785/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 06:21:11] 2024-05-17 13:20:51,268 | INFO     | extracted standard info from prmon json
[2024-05-17 06:21:11] 2024-05-17 13:20:51,268 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 06:21:11] 2024-05-17 13:20:51,268 | WARNING  | GPU info not found in prmon json
[2024-05-17 06:21:11] 2024-05-17 13:20:51,269 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 06:21:11] 2024-05-17 13:20:51,269 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 06:21:11] 2024-05-17 13:20:51,271 | INFO     | fitting pss+swap vs Time
[2024-05-17 06:21:11] 2024-05-17 13:20:51,271 | INFO     | model: linear, x: [1715949506.0, 1715949567.0, 1715949628.0, 1715949689.0, 1715949750.0, 1715949811.0, 1715949872.0, 1715949933.0, 1715949994.0, 1715950055.0, 1715
[2024-05-17 06:21:11] 2024-05-17 13:20:51,271 | INFO     | sum of square deviations: 19832930.0
[2024-05-17 06:21:11] 2024-05-17 13:20:51,272 | INFO     | sum of deviations: 13862852710.5
[2024-05-17 06:21:11] 2024-05-17 13:20:51,272 | INFO     | mean x: 1715950695.5
[2024-05-17 06:21:11] 2024-05-17 13:20:51,272 | INFO     | mean y: 2678028.725
[2024-05-17 06:21:11] 2024-05-17 13:20:51,272 | INFO     | -- intersect: -1199415247118.8218
[2024-05-17 06:21:11] 2024-05-17 13:20:51,272 | INFO     | intersect: -1199415247118.8218
[2024-05-17 06:21:11] 2024-05-17 13:20:51,272 | INFO     | chi2: 1.6577682201216002
[2024-05-17 06:21:11] 2024-05-17 13:20:51,272 | INFO     | -- intersect: -1199415247118.8218
[2024-05-17 06:21:11] 2024-05-17 13:20:51,273 | INFO     | current memory leak: 698.98 B/s (using 40 data points, chi2=1.66)
[2024-05-17 06:21:11] 2024-05-17 13:20:51,273 | INFO     | ..............................
[2024-05-17 06:21:11] 2024-05-17 13:20:51,273 | INFO     | . Timing measurements:
[2024-05-17 06:21:11] 2024-05-17 13:20:51,273 | INFO     | . get job = 0 s
[2024-05-17 06:21:11] 2024-05-17 13:20:51,273 | INFO     | . initial setup = 1 s
[2024-05-17 06:21:11] 2024-05-17 13:20:51,274 | INFO     | . payload setup = 6 s
[2024-05-17 06:21:11] 2024-05-17 13:20:51,274 | INFO     | . stage-in = 0 s
[2024-05-17 06:21:11] 2024-05-17 13:20:51,274 | INFO     | . payload execution = 2843 s
[2024-05-17 06:21:11] 2024-05-17 13:20:51,274 | INFO     | . stage-out = 0 s
[2024-05-17 06:21:11] 2024-05-17 13:20:51,274 | INFO     | . log creation = 0 s
[2024-05-17 06:21:11] 2024-05-17 13:20:51,274 | INFO     | ..............................
[2024-05-17 06:21:11] 2024-05-17 13:20:51,363 | INFO     | 
[2024-05-17 06:21:11] 2024-05-17 13:20:51,364 | INFO     | job summary report
[2024-05-17 06:21:11] 2024-05-17 13:20:51,364 | INFO     | --------------------------------------------------
[2024-05-17 06:21:11] 2024-05-17 13:20:51,364 | INFO     | PanDA job id: 6207572785
[2024-05-17 06:21:11] 2024-05-17 13:20:51,364 | INFO     | task id: 38776104
[2024-05-17 06:21:11] 2024-05-17 13:20:51,364 | INFO     | errors: (none)
[2024-05-17 06:21:11] 2024-05-17 13:20:51,364 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 06:21:11] 2024-05-17 13:20:51,364 | INFO     | pilot state: finished 
[2024-05-17 06:21:11] 2024-05-17 13:20:51,365 | INFO     | transexitcode: 0
[2024-05-17 06:21:11] 2024-05-17 13:20:51,365 | INFO     | exeerrorcode: 0
[2024-05-17 06:21:11] 2024-05-17 13:20:51,365 | INFO     | exeerrordiag: 
[2024-05-17 06:21:11] 2024-05-17 13:20:51,365 | INFO     | exitcode: 0
[2024-05-17 06:21:11] 2024-05-17 13:20:51,365 | INFO     | exitmsg: OK
[2024-05-17 06:21:11] 2024-05-17 13:20:51,365 | INFO     | cpuconsumptiontime: 23336 s
[2024-05-17 06:21:11] 2024-05-17 13:20:51,365 | INFO     | nevents: 400
[2024-05-17 06:21:11] 2024-05-17 13:20:51,365 | INFO     | neventsw: 0
[2024-05-17 06:21:11] 2024-05-17 13:20:51,365 | INFO     | pid: 73098
[2024-05-17 06:21:11] 2024-05-17 13:20:51,366 | INFO     | pgrp: 73098
[2024-05-17 06:21:11] 2024-05-17 13:20:51,366 | INFO     | corecount: 12
[2024-05-17 06:21:11] 2024-05-17 13:20:51,366 | INFO     | event service: False
[2024-05-17 06:21:11] 2024-05-17 13:20:51,366 | INFO     | sizes: {0: 2392027, 1: 2392226, 5: 2392432, 11: 2392488, 2852: 2417800, 2855: 2426938, 2860: 2427052}
[2024-05-17 06:21:11] 2024-05-17 13:20:51,366 | INFO     | --------------------------------------------------
[2024-05-17 06:21:11] 2024-05-17 13:20:51,366 | INFO     | 
[2024-05-17 06:21:11] 2024-05-17 13:20:51,366 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 06:21:11] 2024-05-17 13:20:51,397 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,398 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,398 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,398 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,398 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,398 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,398 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 06:21:11] 2024-05-17 13:20:51,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,400 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 06:21:11] 2024-05-17 13:20:51,400 | INFO     | job 6207572785 has completed (purged errors)
[2024-05-17 06:21:11] 2024-05-17 13:20:51,400 | INFO     | overall cleanup function is called
[2024-05-17 06:21:11] 2024-05-17 13:20:52,409 | INFO     | --- collectZombieJob: --- 10, [73098]
[2024-05-17 06:21:11] 2024-05-17 13:20:52,409 | INFO     | zombie collector waiting for pid 73098
[2024-05-17 06:21:11] 2024-05-17 13:20:52,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 06:21:11] 2024-05-17 13:20:53,412 | INFO     | collected zombie processes
[2024-05-17 06:21:11] 2024-05-17 13:20:53,413 | INFO     | will now attempt to kill all subprocesses of pid=73098
[2024-05-17 06:21:11] 2024-05-17 13:20:53,531 | INFO     | process IDs to be killed: [73098] (in reverse order)
[2024-05-17 06:21:11] 2024-05-17 13:20:53,650 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 06:21:11] 2024-05-17 13:20:53,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 06:21:11] 2024-05-17 13:20:53,658 | INFO     | did not find any defunct processes belonging to 73098
[2024-05-17 06:21:11] 2024-05-17 13:20:53,665 | INFO     | did not find any defunct processes belonging to 73098
[2024-05-17 06:21:11] 2024-05-17 13:20:53,666 | INFO     | ready for new job
[2024-05-17 06:21:11] 2024-05-17 13:20:53,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 06:21:11] 2024-05-17 13:20:53,668 | INFO     | *************************************
[2024-05-17 06:21:11] 2024-05-17 13:20:53,668 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 06:21:11] 2024-05-17 13:20:53,668 | INFO     | *************************************
[2024-05-17 06:21:11] 2024-05-17 13:20:53,668 | INFO     | 
[2024-05-17 06:21:11] 2024-05-17 13:20:53,673 | INFO     | architecture information:
[2024-05-17 06:21:11] 2024-05-17 13:20:53,673 | INFO     | executing command: cat /etc/os-release
[2024-05-17 06:21:11] 2024-05-17 13:20:53,698 | INFO     | cat /etc/os-release:
[2024-05-17 06:21:11] NAME="CentOS Linux"
[2024-05-17 06:21:11] VERSION="7 (Core)"
[2024-05-17 06:21:11] ID="centos"
[2024-05-17 06:21:11] ID_LIKE="rhel fedora"
[2024-05-17 06:21:11] VERSION_ID="7"
[2024-05-17 06:21:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 06:21:11] ANSI_COLOR="0;31"
[2024-05-17 06:21:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 06:21:11] HOME_URL="https://www.centos.org/"
[2024-05-17 06:21:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 06:21:11] 
[2024-05-17 06:21:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 06:21:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 06:21:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 06:21:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 06:21:11] 
[2024-05-17 06:21:11] 2024-05-17 13:20:53,698 | INFO     | *************************************
[2024-05-17 06:21:11] 2024-05-17 13:20:54,202 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 06:21:11] 2024-05-17 13:20:54,231 | INFO     | sufficient remaining disk space (2237917036544 B)
[2024-05-17 06:21:11] 2024-05-17 13:20:54,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 06:21:11] 2024-05-17 13:20:54,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 06:21:11] 2024-05-17 13:20:54,232 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 06:21:11] 2024-05-17 13:20:54,232 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 06:21:11] 2024-05-17 13:20:54,233 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 06:21:11] 2024-05-17 13:20:54,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 06:21:11] 2024-05-17 13:20:54,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 06:21:11] 2024-05-17 13:20:54,364 | INFO     | all data control threads have been joined
[2024-05-17 06:21:11] 2024-05-17 13:20:54,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 06:21:11] 2024-05-17 13:20:54,525 | INFO     | aborting loop
[2024-05-17 06:21:11] 2024-05-17 13:20:54,878 | INFO     | all payload control threads have been joined
[2024-05-17 06:21:11] 2024-05-17 13:20:55,238 | INFO     | [job] retrieve thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:55,248 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:55,293 | INFO     | all job control threads have been joined
[2024-05-17 06:21:11] 2024-05-17 13:20:55,328 | INFO     | [data] copytool_in thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:55,372 | INFO     | [data] control thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:55,530 | INFO     | [job] job monitor thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:55,881 | INFO     | [payload] control thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:55,928 | INFO     | [payload] validate_post thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:56,020 | INFO     | [payload] failed_post thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:56,240 | INFO     | [data] copytool_out thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:56,299 | INFO     | [job] control thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:56,314 | INFO     | [job] validate thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:56,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 06:21:11] 2024-05-17 13:20:56,491 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:56,583 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:20:56,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 06:21:11] 2024-05-17 13:20:57,382 | INFO     | [job] queue monitor thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:21:00,979 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:21:04,822 | INFO     | job.realtimelogging is not enabled
[2024-05-17 06:21:11] 2024-05-17 13:21:05,827 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 06:21:11] 2024-05-17 13:21:06,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139854233413440)>', '<ExcThread(monitor, started 139853949802240)>']
[2024-05-17 06:21:11] 2024-05-17 13:21:06,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 06:21:11] 2024-05-17 13:21:06,300 | INFO     | [monitor] control thread has ended
[2024-05-17 06:21:11] 2024-05-17 13:21:11,096 | INFO     | all workflow threads have been joined
[2024-05-17 06:21:11] 2024-05-17 13:21:11,096 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 06:21:11] 2024-05-17 13:21:11,097 | INFO     | traces error code: 0
[2024-05-17 06:21:11] 2024-05-17 13:21:11,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 06:21:11] 2024-05-17 13:21:11,189 [wrapper] ==== pilot stdout END ====
[2024-05-17 06:21:11] 2024-05-17 13:21:11,193 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 06:21:11] 2024-05-17 13:21:11,197 [wrapper] pilotpid: 66660
[2024-05-17 06:21:11] 2024-05-17 13:21:11,201 [wrapper] Pilot exit status: 0
[2024-05-17 06:21:11] 2024-05-17 13:21:11,215 [wrapper] pandaids: 6207572785
[2024-05-17 06:21:11] 2024-05-17 13:21:11,290 [wrapper] cleanup: SIGTERM to supervisor_pilot 105779 66661
[2024-05-17 06:21:11] 2024-05-17 13:21:11,295 [wrapper] Test setup, not cleaning
[2024-05-17 06:21:11] 2024-05-17 13:21:11,299 [wrapper] ==== wrapper stdout END ====
[2024-05-17 06:21:11] 2024-05-17 13:21:11,303 [wrapper] ==== wrapper stderr END ====
[2024-05-17 06:21:11] 2024-05-17 13:21:11,311 [wrapper] apfmon messages muted
[2024-05-17 06:21:11]  *** Error codes and diagnostics ***
[2024-05-17 06:21:11]     "exeErrorCode": 0,
[2024-05-17 06:21:11]     "exeErrorDiag": "",
[2024-05-17 06:21:11]     "pilotErrorCode": 0,
[2024-05-17 06:21:11]     "pilotErrorDiag": "",
[2024-05-17 06:21:11]  *** Listing of results directory ***
[2024-05-17 06:21:11] total 807396
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc    467845 May 16 12:19 pilot3.tar.gz
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc      5633 May 16 12:24 queuedata.json
[2024-05-17 06:21:11] -rwx------ 1 boinc boinc     32251 May 16 12:24 runpilot2-wrapper.sh
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc       100 May 17 05:32 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 06:21:11] -rwxr-xr-x 1 boinc boinc      7986 May 17 05:32 run_atlas
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc       105 May 17 05:32 job.xml
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc      6628 May 17 05:32 init_data.xml
[2024-05-17 06:21:11] -rw-r--r-- 2 boinc boinc 596726465 May 17 05:32 EVNT.38776100._000083.pool.root.1
[2024-05-17 06:21:11] -rw-r--r-- 2 boinc boinc     17537 May 17 05:32 start_atlas.sh
[2024-05-17 06:21:11] drwxrwx--x 2 boinc boinc      4096 May 17 05:32 shared
[2024-05-17 06:21:11] -rw-r--r-- 2 boinc boinc    480002 May 17 05:32 input.tar.gz
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc         0 May 17 05:32 boinc_lockfile
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc      2641 May 17 05:32 pandaJob.out
[2024-05-17 06:21:11] -rw------- 1 boinc boinc       424 May 17 05:32 setup.sh.local
[2024-05-17 06:21:11] -rw------- 1 boinc boinc   1019370 May 17 05:32 agis_schedconf.cvmfs.json
[2024-05-17 06:21:11] -rw------- 1 boinc boinc         0 May 17 05:32 agis_ddmendpoints.agis.ALL.json
[2024-05-17 06:21:11] -rw------- 1 boinc boinc   1324701 May 17 05:32 cric_ddmendpoints.json
[2024-05-17 06:21:11] drwx------ 4 boinc boinc      4096 May 17 05:32 pilot3
[2024-05-17 06:21:11] -rw------- 1 boinc boinc        95 May 17 06:20 pilot_heartbeat.json
[2024-05-17 06:21:11] -rw------- 1 boinc boinc 225197108 May 17 06:20 HITS.38776104._011427.pool.root.1
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc       530 May 17 06:20 boinc_task_state.xml
[2024-05-17 06:21:11] -rw------- 1 boinc boinc      1038 May 17 06:20 memory_monitor_summary.json
[2024-05-17 06:21:11] -rw------- 1 boinc boinc    350724 May 17 06:20 log.38776104._011427.job.log.tgz.1
[2024-05-17 06:21:11] -rw------- 1 boinc boinc      7751 May 17 06:20 heartbeat.json
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc        27 May 17 06:21 wrapper_checkpoint.txt
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc      8192 May 17 06:21 boinc_mmap_file
[2024-05-17 06:21:11] -rw------- 1 boinc boinc      4405 May 17 06:21 pilotlog.txt
[2024-05-17 06:21:11] -rw------- 1 boinc boinc    307240 May 17 06:21 log.38776104._011427.job.log.1
[2024-05-17 06:21:11] -rw------- 1 boinc boinc       357 May 17 06:21 output.list
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc       620 May 17 06:21 runtime_log
[2024-05-17 06:21:11] -rw------- 1 boinc boinc    675840 May 17 06:21 result.tar.gz
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc     11286 May 17 06:21 runtime_log.err
[2024-05-17 06:21:11] -rw------- 1 boinc boinc       651 May 17 06:21 nCWLDm3svR5nsSi4apGgGQJmABFKDmABFKDm4ySLDml2PKDmDl8vhn.diag
[2024-05-17 06:21:11] -rw-r--r-- 1 boinc boinc     21717 May 17 06:21 stderr.txt
[2024-05-17 06:21:11] HITS file was successfully produced:
[2024-05-17 06:21:11] -rw------- 1 boinc boinc 225197108 May 17 06:20 shared/HITS.pool.root.1
[2024-05-17 06:21:11]  *** Contents of shared directory: ***
[2024-05-17 06:21:11] total 803824
[2024-05-17 06:21:11] -rw-r--r-- 2 boinc boinc 596726465 May 17 05:32 ATLAS.root_0
[2024-05-17 06:21:11] -rw-r--r-- 2 boinc boinc     17537 May 17 05:32 start_atlas.sh
[2024-05-17 06:21:11] -rw-r--r-- 2 boinc boinc    480002 May 17 05:32 input.tar.gz
[2024-05-17 06:21:11] -rw------- 1 boinc boinc 225197108 May 17 06:20 HITS.pool.root.1
[2024-05-17 06:21:11] -rw------- 1 boinc boinc    675840 May 17 06:21 result.tar.gz
06:21:13 (62462): run_atlas exited; CPU time 23272.092733
06:21:13 (62462): called boinc_finish(0)

</stderr_txt>
]]>

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