Stderr output

<core_client_version>8.0.0</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-17 18:42:29 (17004): Detected: vboxwrapper 26206
2024-05-17 18:42:29 (17004): Detected: BOINC client v8.0.0
2024-05-17 18:42:29 (17004): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-05-17 18:42:30 (17004): Successfully copied 'init_data.xml' to the shared directory.
2024-05-17 18:42:30 (17004): Create VM. (boinc_9b1190c4136189da, slot#57)
2024-05-17 18:42:31 (17004): Setting Memory Size for VM. (4400MB)
2024-05-17 18:42:31 (17004): Setting CPU Count for VM. (4)
2024-05-17 18:42:31 (17004): Setting Chipset Options for VM.
2024-05-17 18:42:31 (17004): Setting Graphics Controller Options for VM.
2024-05-17 18:42:32 (17004): Setting Boot Options for VM.
2024-05-17 18:42:32 (17004): Setting Network Configuration for NAT.
2024-05-17 18:42:32 (17004): Enabling VM Network Access.
2024-05-17 18:42:33 (17004): Disabling USB Support for VM.
2024-05-17 18:42:33 (17004): Disabling COM Port Support for VM.
2024-05-17 18:42:33 (17004): Disabling LPT Port Support for VM.
2024-05-17 18:42:33 (17004): Disabling Audio Support for VM.
2024-05-17 18:42:34 (17004): Disabling Clipboard Support for VM.
2024-05-17 18:42:34 (17004): Disabling Drag and Drop Support for VM.
2024-05-17 18:42:34 (17004): Adding storage controller(s) to VM.
2024-05-17 18:42:34 (17004): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-17 18:42:35 (17004): Adding VirtualBox Guest Additions to VM.
2024-05-17 18:42:35 (17004): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-17 18:42:35 (17004): forwarding host port 52740 to guest port 80
2024-05-17 18:42:36 (17004): Enabling remote desktop for VM.
2024-05-17 18:42:36 (17004): Enabling shared directory for VM.
2024-05-17 18:42:37 (17004): Starting VM using VBoxManage interface. (boinc_9b1190c4136189da, slot#57)
2024-05-17 18:42:42 (17004): Successfully started VM. (PID = '21612')
2024-05-17 18:42:42 (17004): Reporting VM Process ID to BOINC.
2024-05-17 18:42:42 (17004): Guest Log: BIOS: VirtualBox 7.0.18
2024-05-17 18:42:42 (17004): Guest Log: CPUID EDX: 0x178bfbff
2024-05-17 18:42:42 (17004): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-17 18:42:42 (17004): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-17 18:42:42 (17004): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-17 18:42:42 (17004): Detected: Web Application Enabled (http://localhost:52740)
2024-05-17 18:42:42 (17004): Detected: Remote Desktop Enabled (localhost:52743)
2024-05-17 18:42:42 (17004): Preference change detected
2024-05-17 18:42:42 (17004): Setting CPU throttle for VM. (100%)
2024-05-17 18:42:43 (17004): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-17 18:42:44 (17004): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-17 18:42:44 (17004): Guest Log: BIOS: Booting from Hard Disk...
2024-05-17 18:42:46 (17004): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-17 18:42:46 (17004): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-17 18:42:46 (17004): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-17 18:42:54 (17004): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-17 18:42:54 (17004): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-17 18:42:59 (17004): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-17 18:42:59 (17004): Guest Log: 00:00:00.000175 main     Log opened 2024-05-17T18:42:57.504024000Z
2024-05-17 18:42:59 (17004): Guest Log: 00:00:00.000311 main     OS Product: Linux
2024-05-17 18:42:59 (17004): Guest Log: 00:00:00.000332 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-17 18:42:59 (17004): Guest Log: 00:00:00.000349 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-17 18:42:59 (17004): Guest Log: 00:00:00.000365 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-17 18:42:59 (17004): Guest Log: 00:00:00.000365 main     Process ID: 1298
2024-05-17 18:42:59 (17004): Guest Log: 00:00:00.000366 main     Package type: LINUX_64BITS_GENERIC
2024-05-17 18:42:59 (17004): Guest Log: 00:00:00.001053 main     5.2.32 r132073 started. Verbose level = 0
2024-05-17 18:42:59 (17004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-17 18:42:59 (17004): Guest Log: [INFO] Mounting shared directory
2024-05-17 18:42:59 (17004): Guest Log: [INFO] Checking for init_data.xml
2024-05-17 18:43:05 (17004): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-17 18:43:05 (17004): Guest Log: [INFO] Detected branch: prod
2024-05-17 18:43:07 (17004): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-17 18:43:07 (17004): Guest Log: Copying input files
2024-05-17 18:43:09 (17004): Guest Log: 00:00:10.003286 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 074 856 000ns (GuestNow=1 715 960 589 431 103 000 ns GuestLast=1 715 971 377 505 959 000 ns fSetTimeLastLoop=true )
2024-05-17 18:43:10 (17004): Guest Log: Copied input files into RunAtlas.
2024-05-17 18:43:10 (17004): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-17 18:43:10 (17004): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-17 18:43:10 (17004): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-17 18:43:10 (17004): Guest Log: Further information can be found at the LHC@home message board.
2024-05-17 18:43:18 (17004): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-17 18:43:19 (17004): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-17 18:43:19 (17004): Guest Log: 2.6.3.0 1595 0 32040 132846 4 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-05-17 18:43:19 (17004): Guest Log: copied the webapp to /var/www
2024-05-17 18:43:19 (17004): Guest Log: ATHENA_PROC_NUMBER=4
2024-05-17 18:43:19 (17004): Guest Log: ATHENA_CORE_NUMBER=4
2024-05-17 18:43:19 (17004): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-17 18:43:19 (17004): Guest Log:  *** Starting ATLAS job. (PandaID=6207524896 taskID=38776125) ***
2024-05-17 20:22:42 (17004): Status Report: Elapsed Time: '6000.000000'
2024-05-17 20:22:42 (17004): Status Report: CPU Time: '19586.109375'
2024-05-17 20:54:14 (17004): Guest Log:  *** Job finished ***
2024-05-17 20:54:14 (17004): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:53:57,223 | INFO     | [data] queue_monitor thread has finished
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:01,191 | INFO     | job.realtimelogging is not enabled
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:02,193 | INFO     | [payload] run_realtimelog thread has finished
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:03,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140475974195008)>', '<ExcThread(monitor, started 140475394668288)>']
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:03,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:03,951 | INFO     | [monitor] control thread has ended
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,588 | INFO     | all workflow threads have been joined
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,588 | INFO     | end of generic workflow (traces error code: 0)
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,588 | INFO     | traces error code: 0
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,649 [wrapper] ==== pilot stdout END ====
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,655 [wrapper] ==== wrapper stdout RESUME ====
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,660 [wrapper] pilotpid: 6457
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,664 [wrapper] Pilot exit status: 0
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,814 [wrapper] pandaids: 6207524896
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,845 [wrapper] cleanup: SIGTERM to supervisor_pilot  5021 6458
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,850 [wrapper] Test setup, not cleaning
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,856 [wrapper] ==== wrapper stdout END ====
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,860 [wrapper] ==== wrapper stderr END ====
2024-05-17 20:54:14 (17004): Guest Log: 2024-05-17 17:54:08,879 [wrapper] apfmon messages muted
2024-05-17 20:54:14 (17004): Guest Log:  *** Error codes and diagnostics ***
2024-05-17 20:54:14 (17004): Guest Log:     "exeErrorCode": 0,
2024-05-17 20:54:14 (17004): Guest Log:     "exeErrorDiag": "",
2024-05-17 20:54:14 (17004): Guest Log:     "pilotErrorCode": 0,
2024-05-17 20:54:14 (17004): Guest Log:     "pilotErrorDiag": "",
2024-05-17 20:54:14 (17004): Guest Log:  *** Listing of results directory ***
2024-05-17 20:54:14 (17004): Guest Log: total 244828
2024-05-17 20:54:14 (17004): Guest Log: -rw-r--r--. 1 atlas atlas    467845 May 16 18:19 pilot3.tar.gz
2024-05-17 20:54:14 (17004): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 16 18:23 queuedata.json
2024-05-17 20:54:14 (17004): Guest Log: -rwx------. 1 atlas atlas     32251 May 16 18:23 runpilot2-wrapper.sh
2024-05-17 20:54:14 (17004): Guest Log: -rwxr-xr-x. 1 atlas atlas      9185 May 17 15:43 init_data.xml
2024-05-17 20:54:14 (17004): Guest Log: -rwxr-xr-x. 1 atlas atlas    480009 May 17 15:43 input.tar.gz
2024-05-17 20:54:14 (17004): Guest Log: -rwxr-xr-x. 1 atlas atlas     17537 May 17 15:43 start_atlas.sh
2024-05-17 20:54:14 (17004): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 17 15:43 EVNT.38776119._000410.pool.root.1 -> /data/./ATLAS.root_0
2024-05-17 20:54:14 (17004): Guest Log: -rw-r--r--. 1 atlas atlas      2635 May 17 15:43 pandaJob.out
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas       424 May 17 15:43 setup.sh.local
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas   1019460 May 17 15:44 agis_schedconf.cvmfs.json
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas         0 May 17 15:44 agis_ddmendpoints.agis.ALL.json
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas   1324701 May 17 15:44 cric_ddmendpoints.json
2024-05-17 20:54:14 (17004): Guest Log: drwx------. 4 atlas atlas      4096 May 17 15:44 pilot3
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas 245285288 May 17 17:53 HITS.38776125._014238.pool.root.1
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas        95 May 17 17:53 pilot_heartbeat.json
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas      1036 May 17 17:53 memory_monitor_summary.json
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas    267789 May 17 17:53 log.38776125._014238.job.log.tgz.1
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas      7729 May 17 17:53 heartbeat.json
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas      4466 May 17 17:54 pilotlog.txt
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas    708709 May 17 17:54 log.38776125._014238.job.log.1
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas       357 May 17 17:54 output.list
2024-05-17 20:54:14 (17004): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 17 17:54 runtime_log
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas    993280 May 17 17:54 result.tar.gz
2024-05-17 20:54:14 (17004): Guest Log: -rw-r--r--. 1 atlas atlas     10909 May 17 17:54 runtime_log.err
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas       637 May 17 17:54 3uwNDmfwuR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmgxPKDmdWL6bm.diag
2024-05-17 20:54:14 (17004): Guest Log: Looking for outputfile HITS.38776125._014238.pool.root.1
2024-05-17 20:54:14 (17004): Guest Log: HITS file was successfully produced
2024-05-17 20:54:14 (17004): Guest Log: -rw-------. 1 atlas atlas 245285288 May 17 17:53 /home/atlas/RunAtlas/HITS.38776125._014238.pool.root.1
2024-05-17 20:54:16 (17004): Guest Log: Successfully finished the ATLAS job!
2024-05-17 20:54:16 (17004): Guest Log: Copying the results back to the shared directory!
2024-05-17 20:54:16 (17004): Guest Log:  *** Contents of shared directory: ***
2024-05-17 20:54:16 (17004): Guest Log: total 828592
2024-05-17 20:54:16 (17004): Guest Log: -rwxrwxrwx. 1 root root 601676746 May 17 15:42 ATLAS.root_0
2024-05-17 20:54:16 (17004): Guest Log: -rwxrwxrwx. 1 root root 245285288 May 17  2024 HITS.pool.root.1
2024-05-17 20:54:16 (17004): Guest Log: -rwxrwxrwx. 1 root root      9185 May 17 15:42 init_data.xml
2024-05-17 20:54:16 (17004): Guest Log: -rwxrwxrwx. 1 root root    480009 May 17 00:56 input.tar.gz
2024-05-17 20:54:16 (17004): Guest Log: -rwxrwxrwx. 1 root root    993280 May 17  2024 result.tar.gz
2024-05-17 20:54:16 (17004): Guest Log: -rwxrwxrwx. 1 root root     17537 May 17 00:56 start_atlas.sh
2024-05-17 20:54:16 (17004): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-17 20:54:16 (17004): VM Completion File Detected.
2024-05-17 20:54:16 (17004): Powering off VM.
2024-05-17 20:54:17 (17004): Successfully stopped VM.
2024-05-17 20:54:17 (17004): Deregistering VM. (boinc_9b1190c4136189da, slot#57)
2024-05-17 20:54:17 (17004): Removing network bandwidth throttle group from VM.
2024-05-17 20:54:17 (17004): Removing VM from VirtualBox.
20:54:22 (17004): called boinc_finish(0)

</stderr_txt>
]]>

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