Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:12:28 (9691): wrapper (7.7.26015): starting
18:12:28 (9691): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 18:12:28] Arguments: --nthreads 4
[2024-05-19 18:12:28] Threads: 4
[2024-05-19 18:12:28] Checking for CVMFS
[2024-05-19 18:12:28] No cvmfs_config command found, will try listing directly
[2024-05-19 18:12:28] CVMFS is ok
[2024-05-19 18:12:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 18:12:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 18:12:28] Further information can be found at the LHC@home message board.
[2024-05-19 18:12:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 18:12:28] Checking for apptainer binary...
[2024-05-19 18:12:28] which: no apptainer in ((null))
[2024-05-19 18:12:28] apptainer is not installed, using version from CVMFS
[2024-05-19 18:12:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 18:12:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2024-05-19 18:12:29] apptainer works
[2024-05-19 18:12:29] Set ATHENA_PROC_NUMBER=4
[2024-05-19 18:12:29] Set ATHENA_CORE_NUMBER=4
[2024-05-19 18:12:29] Starting ATLAS job with PandaID=6207495109
[2024-05-19 18:12:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 20:48:08]  *** The last 200 lines of the pilot log: ***
[2024-05-19 20:48:08] 2024-05-19 18:47:54,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 20:48:08] 2024-05-19 18:47:54,033 | INFO     | fitting pss+swap vs Time
[2024-05-19 20:48:08] 2024-05-19 18:47:54,034 | INFO     | model: linear, x: [1716135178.0, 1716135239.0, 1716135300.0, 1716135361.0, 1716135422.0, 1716135483.0, 1716135544.0, 1716135605.0, 1716135666.0, 1716135727.0, 1716
[2024-05-19 20:48:08] 2024-05-19 18:47:54,034 | INFO     | sum of square deviations: 1110539892.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,035 | INFO     | sum of deviations: 51963382713.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,035 | INFO     | mean x: 1716139814.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,035 | INFO     | mean y: 2247674.993464052
[2024-05-19 20:48:08] 2024-05-19 18:47:54,035 | INFO     | -- intersect: -80297821315.14293
[2024-05-19 20:48:08] 2024-05-19 18:47:54,036 | INFO     | intersect: -80297821315.14293
[2024-05-19 20:48:08] 2024-05-19 18:47:54,036 | INFO     | chi2: 4.95575673499187
[2024-05-19 20:48:08] 2024-05-19 18:47:54,036 | INFO     | model: linear, x: [1716135178.0, 1716135239.0, 1716135300.0, 1716135361.0, 1716135422.0, 1716135483.0, 1716135544.0, 1716135605.0, 1716135666.0, 1716135727.0, 1716
[2024-05-19 20:48:08] 2024-05-19 18:47:54,036 | INFO     | sum of square deviations: 1005179777.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,037 | INFO     | sum of deviations: 59807828566.00001
[2024-05-19 20:48:08] 2024-05-19 18:47:54,037 | INFO     | mean x: 1716139661.5
[2024-05-19 20:48:08] 2024-05-19 18:47:54,038 | INFO     | mean y: 2258657.621621622
[2024-05-19 20:48:08] 2024-05-19 18:47:54,038 | INFO     | -- intersect: -102107422634.05171
[2024-05-19 20:48:08] 2024-05-19 18:47:54,038 | INFO     | intersect: -102107422634.05171
[2024-05-19 20:48:08] 2024-05-19 18:47:54,038 | INFO     | chi2: 4.162312805516583
[2024-05-19 20:48:08] 2024-05-19 18:47:54,038 | INFO     | current chi2=4.162312805516583 (change=16.010550394310034 %)
[2024-05-19 20:48:08] 2024-05-19 18:47:54,038 | INFO     | right removable region: 147
[2024-05-19 20:48:08] 2024-05-19 18:47:54,039 | INFO     | model: linear, x: [1716135483.0, 1716135544.0, 1716135605.0, 1716135666.0, 1716135727.0, 1716135788.0, 1716135849.0, 1716135910.0, 1716135971.0, 1716136032.0, 1716
[2024-05-19 20:48:08] 2024-05-19 18:47:54,039 | INFO     | sum of square deviations: 1005179777.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,040 | INFO     | sum of deviations: 18400827632.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,040 | INFO     | mean x: 1716139966.5
[2024-05-19 20:48:08] 2024-05-19 18:47:54,040 | INFO     | mean y: 2296079.054054054
[2024-05-19 20:48:08] 2024-05-19 18:47:54,040 | INFO     | -- intersect: -31413373474.3066
[2024-05-19 20:48:08] 2024-05-19 18:47:54,040 | INFO     | intersect: -31413373474.3066
[2024-05-19 20:48:08] 2024-05-19 18:47:54,041 | INFO     | chi2: 2.558999627692711
[2024-05-19 20:48:08] 2024-05-19 18:47:54,041 | INFO     | current chi2=2.558999627692711 (change=48.363090350581764 %)
[2024-05-19 20:48:08] 2024-05-19 18:47:54,041 | INFO     | model: linear, x: [1716135788.0, 1716135849.0, 1716135910.0, 1716135971.0, 1716136032.0, 1716136093.0, 1716136154.0, 1716136215.0, 1716136276.0, 1716136337.0, 1716
[2024-05-19 20:48:08] 2024-05-19 18:47:54,041 | INFO     | sum of square deviations: 906703512.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,042 | INFO     | sum of deviations: -10440058683.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,042 | INFO     | mean x: 1716140119.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,042 | INFO     | mean y: 2340750.4825174827
[2024-05-19 20:48:08] 2024-05-19 18:47:54,043 | INFO     | -- intersect: 19762497531.049397
[2024-05-19 20:48:08] 2024-05-19 18:47:54,043 | INFO     | intersect: 19762497531.049397
[2024-05-19 20:48:08] 2024-05-19 18:47:54,043 | INFO     | chi2: 0.9405523841649823
[2024-05-19 20:48:08] 2024-05-19 18:47:54,043 | INFO     | current chi2=0.9405523841649823 (change=63.245309847386764 %)
[2024-05-19 20:48:08] 2024-05-19 18:47:54,043 | INFO     | model: linear, x: [1716136093.0, 1716136154.0, 1716136215.0, 1716136276.0, 1716136337.0, 1716136398.0, 1716136459.0, 1716136520.0, 1716136581.0, 1716136642.0, 1716
[2024-05-19 20:48:08] 2024-05-19 18:47:54,044 | INFO     | sum of square deviations: 814878534.5
[2024-05-19 20:48:08] 2024-05-19 18:47:54,044 | INFO     | sum of deviations: -14245942348.5
[2024-05-19 20:48:08] 2024-05-19 18:47:54,045 | INFO     | mean x: 1716140271.5
[2024-05-19 20:48:08] 2024-05-19 18:47:54,045 | INFO     | mean y: 2346911.7898550723
[2024-05-19 20:48:08] 2024-05-19 18:47:54,045 | INFO     | -- intersect: 30004407752.34098
[2024-05-19 20:48:08] 2024-05-19 18:47:54,045 | INFO     | intersect: 30004407752.34098
[2024-05-19 20:48:08] 2024-05-19 18:47:54,045 | INFO     | chi2: 0.8476151841571107
[2024-05-19 20:48:08] 2024-05-19 18:47:54,046 | INFO     | current chi2=0.8476151841571107 (change=9.881129597091057 %)
[2024-05-19 20:48:08] 2024-05-19 18:47:54,046 | INFO     | left removable region: 30
[2024-05-19 20:48:08] 2024-05-19 18:47:54,046 | INFO     | model: linear, x: [1716137008.0, 1716137069.0, 1716137130.0, 1716137191.0, 1716137252.0, 1716137313.0, 1716137374.0, 1716137435.0, 1716137496.0, 1716137557.0, 1716
[2024-05-19 20:48:08] 2024-05-19 18:47:54,046 | INFO     | sum of square deviations: 496597218.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,047 | INFO     | sum of deviations: -3382256630.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,047 | INFO     | mean x: 1716140546.0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,047 | INFO     | mean y: 2359621.3846153845
[2024-05-19 20:48:08] 2024-05-19 18:47:54,047 | INFO     | -- intersect: 11690761266.277277
[2024-05-19 20:48:08] 2024-05-19 18:47:54,047 | INFO     | intersect: 11690761266.277277
[2024-05-19 20:48:08] 2024-05-19 18:47:54,048 | INFO     | chi2: 0.00885496702863118
[2024-05-19 20:48:08] 2024-05-19 18:47:54,048 | INFO     | -- intersect: 11690761266.277277
[2024-05-19 20:48:08] 2024-05-19 18:47:54,048 | INFO     | current memory leak: -6.81 B/s (using 117 data points, chi2=0.01)
[2024-05-19 20:48:08] 2024-05-19 18:47:54,048 | INFO     | ..............................
[2024-05-19 20:48:08] 2024-05-19 18:47:54,049 | INFO     | . Timing measurements:
[2024-05-19 20:48:08] 2024-05-19 18:47:54,049 | INFO     | . get job = 0 s
[2024-05-19 20:48:08] 2024-05-19 18:47:54,049 | INFO     | . initial setup = 1 s
[2024-05-19 20:48:08] 2024-05-19 18:47:54,049 | INFO     | . payload setup = 4 s
[2024-05-19 20:48:08] 2024-05-19 18:47:54,049 | INFO     | . stage-in = 0 s
[2024-05-19 20:48:08] 2024-05-19 18:47:54,049 | INFO     | . payload execution = 9289 s
[2024-05-19 20:48:08] 2024-05-19 18:47:54,049 | INFO     | . stage-out = 0 s
[2024-05-19 20:48:08] 2024-05-19 18:47:54,049 | INFO     | . log creation = 0 s
[2024-05-19 20:48:08] 2024-05-19 18:47:54,050 | INFO     | ..............................
[2024-05-19 20:48:08] 2024-05-19 18:47:54,158 | INFO     | 
[2024-05-19 20:48:08] 2024-05-19 18:47:54,158 | INFO     | job summary report
[2024-05-19 20:48:08] 2024-05-19 18:47:54,158 | INFO     | --------------------------------------------------
[2024-05-19 20:48:08] 2024-05-19 18:47:54,158 | INFO     | PanDA job id: 6207495109
[2024-05-19 20:48:08] 2024-05-19 18:47:54,158 | INFO     | task id: 38776104
[2024-05-19 20:48:08] 2024-05-19 18:47:54,158 | INFO     | errors: (none)
[2024-05-19 20:48:08] 2024-05-19 18:47:54,158 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 20:48:08] 2024-05-19 18:47:54,159 | INFO     | pilot state: finished 
[2024-05-19 20:48:08] 2024-05-19 18:47:54,159 | INFO     | transexitcode: 0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,159 | INFO     | exeerrorcode: 0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,159 | INFO     | exeerrordiag: 
[2024-05-19 20:48:08] 2024-05-19 18:47:54,159 | INFO     | exitcode: 0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,159 | INFO     | exitmsg: OK
[2024-05-19 20:48:08] 2024-05-19 18:47:54,159 | INFO     | cpuconsumptiontime: 34527 s
[2024-05-19 20:48:08] 2024-05-19 18:47:54,159 | INFO     | nevents: 400
[2024-05-19 20:48:08] 2024-05-19 18:47:54,160 | INFO     | neventsw: 0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,160 | INFO     | pid: 20771
[2024-05-19 20:48:08] 2024-05-19 18:47:54,160 | INFO     | pgrp: 20771
[2024-05-19 20:48:08] 2024-05-19 18:47:54,160 | INFO     | corecount: 4
[2024-05-19 20:48:08] 2024-05-19 18:47:54,160 | INFO     | event service: False
[2024-05-19 20:48:08] 2024-05-19 18:47:54,160 | INFO     | sizes: {0: 2392104, 1: 2392246, 4: 2392452, 11: 2392480, 9297: 2420842, 9298: 2429824, 9301: 2430008, 9303: 2430178}
[2024-05-19 20:48:08] 2024-05-19 18:47:54,160 | INFO     | --------------------------------------------------
[2024-05-19 20:48:08] 2024-05-19 18:47:54,161 | INFO     | 
[2024-05-19 20:48:08] 2024-05-19 18:47:54,161 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2024-05-19 20:48:08] 2024-05-19 18:47:54,180 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,181 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,181 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,181 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,183 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,183 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,183 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 20:48:08] 2024-05-19 18:47:54,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,183 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 20:48:08] 2024-05-19 18:47:54,183 | INFO     | job 6207495109 has completed (purged errors)
[2024-05-19 20:48:08] 2024-05-19 18:47:54,184 | INFO     | overall cleanup function is called
[2024-05-19 20:48:08] 2024-05-19 18:47:54,342 | WARNING  | process 20771 is no longer using CPU - aborting
[2024-05-19 20:48:08] 2024-05-19 18:47:54,343 | INFO     | aborting job monitoring since job object (job id=6207495109) has expired
[2024-05-19 20:48:08] 2024-05-19 18:47:55,191 | INFO     | --- collectZombieJob: --- 10, [20771]
[2024-05-19 20:48:08] 2024-05-19 18:47:55,192 | INFO     | zombie collector waiting for pid 20771
[2024-05-19 20:48:08] 2024-05-19 18:47:55,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 20:48:08] 2024-05-19 18:47:56,197 | INFO     | collected zombie processes
[2024-05-19 20:48:08] 2024-05-19 18:47:56,197 | INFO     | will now attempt to kill all subprocesses of pid=20771
[2024-05-19 20:48:08] 2024-05-19 18:47:56,284 | INFO     | process IDs to be killed: [20771] (in reverse order)
[2024-05-19 20:48:08] 2024-05-19 18:47:56,366 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 20:48:08] 2024-05-19 18:47:56,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 20:48:08] 2024-05-19 18:47:56,371 | INFO     | did not find any defunct processes belonging to 20771
[2024-05-19 20:48:08] 2024-05-19 18:47:56,375 | INFO     | did not find any defunct processes belonging to 20771
[2024-05-19 20:48:08] 2024-05-19 18:47:56,375 | INFO     | ready for new job
[2024-05-19 20:48:08] 2024-05-19 18:47:56,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 20:48:08] 2024-05-19 18:47:56,377 | INFO     | *************************************
[2024-05-19 20:48:08] 2024-05-19 18:47:56,377 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 20:48:08] 2024-05-19 18:47:56,377 | INFO     | *************************************
[2024-05-19 20:48:08] 2024-05-19 18:47:56,377 | INFO     | 
[2024-05-19 20:48:08] 2024-05-19 18:47:56,378 | INFO     | architecture information:
[2024-05-19 20:48:08] 2024-05-19 18:47:56,379 | INFO     | executing command: cat /etc/os-release
[2024-05-19 20:48:08] 2024-05-19 18:47:56,390 | INFO     | cat /etc/os-release:
[2024-05-19 20:48:08] NAME="CentOS Linux"
[2024-05-19 20:48:08] VERSION="7 (Core)"
[2024-05-19 20:48:08] ID="centos"
[2024-05-19 20:48:08] ID_LIKE="rhel fedora"
[2024-05-19 20:48:08] VERSION_ID="7"
[2024-05-19 20:48:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 20:48:08] ANSI_COLOR="0;31"
[2024-05-19 20:48:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 20:48:08] HOME_URL="https://www.centos.org/"
[2024-05-19 20:48:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 20:48:08] 
[2024-05-19 20:48:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 20:48:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 20:48:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 20:48:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 20:48:08] 
[2024-05-19 20:48:08] 2024-05-19 18:47:56,390 | INFO     | *************************************
[2024-05-19 20:48:08] 2024-05-19 18:47:56,893 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2024-05-19 20:48:08] 2024-05-19 18:47:56,913 | INFO     | sufficient remaining disk space (1630906875904 B)
[2024-05-19 20:48:08] 2024-05-19 18:47:56,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 20:48:08] 2024-05-19 18:47:56,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 20:48:08] 2024-05-19 18:47:56,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 20:48:08] 2024-05-19 18:47:57,102 | INFO     | all data control threads have been joined
[2024-05-19 20:48:08] 2024-05-19 18:47:57,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 20:48:08] 2024-05-19 18:47:57,666 | INFO     | all job control threads have been joined
[2024-05-19 20:48:08] 2024-05-19 18:47:57,815 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 20:48:08] 2024-05-19 18:47:57,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 20:48:08] 2024-05-19 18:47:57,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 20:48:08] 2024-05-19 18:47:57,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 20:48:08] 2024-05-19 18:47:57,851 | INFO     | aborting loop
[2024-05-19 20:48:08] 2024-05-19 18:47:57,919 | INFO     | [job] retrieve thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:57,979 | INFO     | [job] validate thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,021 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,107 | INFO     | [data] control thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,197 | INFO     | all payload control threads have been joined
[2024-05-19 20:48:08] 2024-05-19 18:47:58,313 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,429 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,503 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,551 | INFO     | [data] copytool_in thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,672 | INFO     | [job] control thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,680 | INFO     | [payload] validate_post thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,856 | INFO     | [job] job monitor thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:58,919 | INFO     | [data] copytool_out thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:59,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 20:48:08] 2024-05-19 18:47:59,202 | INFO     | [payload] control thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:47:59,237 | INFO     | [payload] failed_post thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:48:00,173 | INFO     | [job] queue monitor thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:48:01,292 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 20:48:08] 2024-05-19 18:48:03,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47870418687040)>', '<ExcThread(monitor, started 47870598342400)>']
[2024-05-19 20:48:08] 2024-05-19 18:48:03,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 20:48:08] 2024-05-19 18:48:03,842 | INFO     | [monitor] control thread has ended
[2024-05-19 20:48:08] 2024-05-19 18:48:08,255 | INFO     | all workflow threads have been joined
[2024-05-19 20:48:08] 2024-05-19 18:48:08,256 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 20:48:08] 2024-05-19 18:48:08,256 | INFO     | traces error code: 0
[2024-05-19 20:48:08] 2024-05-19 18:48:08,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 20:48:08] 2024-05-19 18:48:08,319 [wrapper] ==== pilot stdout END ====
[2024-05-19 20:48:08] 2024-05-19 18:48:08,321 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 20:48:08] 2024-05-19 18:48:08,324 [wrapper] pilotpid: 13960
[2024-05-19 20:48:08] 2024-05-19 18:48:08,326 [wrapper] Pilot exit status: 0
[2024-05-19 20:48:08] 2024-05-19 18:48:08,335 [wrapper] pandaids: 6207495109
[2024-05-19 20:48:08] 2024-05-19 18:48:08,393 [wrapper] cleanup: SIGTERM to supervisor_pilot  333308 13961
[2024-05-19 20:48:08] 2024-05-19 18:48:08,396 [wrapper] Test setup, not cleaning
[2024-05-19 20:48:08] 2024-05-19 18:48:08,398 [wrapper] ==== wrapper stdout END ====
[2024-05-19 20:48:08] 2024-05-19 18:48:08,400 [wrapper] ==== wrapper stderr END ====
[2024-05-19 20:48:08] 2024-05-19 18:48:08,404 [wrapper] apfmon messages muted
[2024-05-19 20:48:08]  *** Error codes and diagnostics ***
[2024-05-19 20:48:08]     "exeErrorCode": 0,
[2024-05-19 20:48:08]     "exeErrorDiag": "",
[2024-05-19 20:48:08]     "pilotErrorCode": 0,
[2024-05-19 20:48:08]     "pilotErrorDiag": "",
[2024-05-19 20:48:08]  *** Listing of results directory ***
[2024-05-19 20:48:08] total 817708
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc    467845 May 16 19:20 pilot3.tar.gz
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc      5633 May 16 19:27 queuedata.json
[2024-05-19 20:48:08] -rwx------ 1 boinc boinc     32251 May 16 19:28 runpilot2-wrapper.sh
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc       100 May 19 18:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 20:48:08] -rwxr-xr-x 1 boinc boinc      7986 May 19 18:12 run_atlas
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc       105 May 19 18:12 job.xml
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc      6457 May 19 18:12 init_data.xml
[2024-05-19 20:48:08] -rw-r--r-- 2 boinc boinc 602052427 May 19 18:12 EVNT.38776100._000411.pool.root.1
[2024-05-19 20:48:08] -rw-r--r-- 2 boinc boinc     17537 May 19 18:12 start_atlas.sh
[2024-05-19 20:48:08] drwxrwx--x 2 boinc boinc      4096 May 19 18:12 shared
[2024-05-19 20:48:08] -rw-r--r-- 2 boinc boinc    480005 May 19 18:12 input.tar.gz
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc         0 May 19 18:12 boinc_lockfile
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc      2644 May 19 18:12 pandaJob.out
[2024-05-19 20:48:08] -rw------- 1 boinc boinc       424 May 19 18:12 setup.sh.local
[2024-05-19 20:48:08] -rw------- 1 boinc boinc   1014053 May 19 18:12 agis_schedconf.cvmfs.json
[2024-05-19 20:48:08] -rw------- 1 boinc boinc         0 May 19 18:12 agis_ddmendpoints.agis.ALL.json
[2024-05-19 20:48:08] -rw------- 1 boinc boinc   1324701 May 19 18:12 cric_ddmendpoints.json
[2024-05-19 20:48:08] drwx------ 4 boinc boinc      4096 May 19 18:12 pilot3
[2024-05-19 20:48:08] -rw------- 1 boinc boinc        95 May 19 20:46 pilot_heartbeat.json
[2024-05-19 20:48:08] -rw------- 1 boinc boinc 229165540 May 19 20:47 HITS.38776104._010893.pool.root.1
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc       530 May 19 20:47 boinc_task_state.xml
[2024-05-19 20:48:08] -rw------- 1 boinc boinc      1047 May 19 20:47 memory_monitor_summary.json
[2024-05-19 20:48:08] -rw------- 1 boinc boinc    305602 May 19 20:47 log.38776104._010893.job.log.tgz.1
[2024-05-19 20:48:08] -rw------- 1 boinc boinc      7764 May 19 20:47 heartbeat.json
[2024-05-19 20:48:08] -rw------- 1 boinc boinc      4222 May 19 20:48 pilotlog.txt
[2024-05-19 20:48:08] -rw------- 1 boinc boinc    987764 May 19 20:48 log.38776104._010893.job.log.1
[2024-05-19 20:48:08] -rw------- 1 boinc boinc       357 May 19 20:48 output.list
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc       620 May 19 20:48 runtime_log
[2024-05-19 20:48:08] -rw------- 1 boinc boinc   1310720 May 19 20:48 result.tar.gz
[2024-05-19 20:48:08] -rw------- 1 boinc boinc       656 May 19 20:48 vr5NDmd5tR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmItPKDmenVYXn.diag
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc     11409 May 19 20:48 runtime_log.err
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc      8192 May 19 20:48 boinc_mmap_file
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc        27 May 19 20:48 wrapper_checkpoint.txt
[2024-05-19 20:48:08] -rw-r--r-- 1 boinc boinc     21288 May 19 20:48 stderr.txt
[2024-05-19 20:48:08] HITS file was successfully produced:
[2024-05-19 20:48:08] -rw------- 1 boinc boinc 229165540 May 19 20:47 shared/HITS.pool.root.1
[2024-05-19 20:48:08]  *** Contents of shared directory: ***
[2024-05-19 20:48:08] total 813520
[2024-05-19 20:48:08] -rw-r--r-- 2 boinc boinc 602052427 May 19 18:12 ATLAS.root_0
[2024-05-19 20:48:08] -rw-r--r-- 2 boinc boinc     17537 May 19 18:12 start_atlas.sh
[2024-05-19 20:48:08] -rw-r--r-- 2 boinc boinc    480005 May 19 18:12 input.tar.gz
[2024-05-19 20:48:08] -rw------- 1 boinc boinc 229165540 May 19 20:47 HITS.pool.root.1
[2024-05-19 20:48:08] -rw------- 1 boinc boinc   1310720 May 19 20:48 result.tar.gz
20:48:10 (9691): run_atlas exited; CPU time 34332.330460
20:48:10 (9691): called boinc_finish(0)

</stderr_txt>
]]>

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