Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:53:51 (4015695): wrapper (7.7.26015): starting
20:53:51 (4015695): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 20:53:51] Arguments: --nthreads 4
[2024-05-19 20:53:51] Threads: 4
[2024-05-19 20:53:51] Checking for CVMFS
[2024-05-19 20:53:51] No cvmfs_config command found, will try listing directly
[2024-05-19 20:53:51] CVMFS is ok
[2024-05-19 20:53:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 20:53:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 20:53:51] Further information can be found at the LHC@home message board.
[2024-05-19 20:53:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 20:53:51] Checking for apptainer binary...
[2024-05-19 20:53:51] which: no apptainer in ((null))
[2024-05-19 20:53:51] apptainer is not installed, using version from CVMFS
[2024-05-19 20:53:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 20:53:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-19 20:53:52] apptainer works
[2024-05-19 20:53:52] Set ATHENA_PROC_NUMBER=4
[2024-05-19 20:53:52] Set ATHENA_CORE_NUMBER=4
[2024-05-19 20:53:52] Starting ATLAS job with PandaID=6207470338
[2024-05-19 20:53:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 23:31:37]  *** The last 200 lines of the pilot log: ***
[2024-05-19 23:31:37] 2024-05-19 21:31:16,273 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 23:31:37] 2024-05-19 21:31:16,276 | INFO     | fitting pss+swap vs Time
[2024-05-19 23:31:37] 2024-05-19 21:31:16,276 | INFO     | model: linear, x: [1716144865.0, 1716144926.0, 1716144987.0, 1716145048.0, 1716145109.0, 1716145170.0, 1716145231.0, 1716145292.0, 1716145353.0, 1716145414.0, 1716
[2024-05-19 23:31:37] 2024-05-19 21:31:16,276 | INFO     | sum of square deviations: 1154663510.0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,277 | INFO     | sum of deviations: 58269146815.00001
[2024-05-19 23:31:37] 2024-05-19 21:31:16,277 | INFO     | mean x: 1716149562.0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,277 | INFO     | mean y: 2231081.2387096775
[2024-05-19 23:31:37] 2024-05-19 21:31:16,277 | INFO     | -- intersect: -86601848738.23697
[2024-05-19 23:31:37] 2024-05-19 21:31:16,277 | INFO     | intersect: -86601848738.23697
[2024-05-19 23:31:37] 2024-05-19 21:31:16,278 | INFO     | chi2: 4.807480300691483
[2024-05-19 23:31:37] 2024-05-19 21:31:16,278 | INFO     | model: linear, x: [1716144865.0, 1716144926.0, 1716144987.0, 1716145048.0, 1716145109.0, 1716145170.0, 1716145231.0, 1716145292.0, 1716145353.0, 1716145414.0, 1716
[2024-05-19 23:31:37] 2024-05-19 21:31:16,278 | INFO     | sum of square deviations: 1046484737.5
[2024-05-19 23:31:37] 2024-05-19 21:31:16,280 | INFO     | sum of deviations: 65750415991.999985
[2024-05-19 23:31:37] 2024-05-19 21:31:16,280 | INFO     | mean x: 1716149409.5
[2024-05-19 23:31:37] 2024-05-19 21:31:16,280 | INFO     | mean y: 2241267.053333333
[2024-05-19 23:31:37] 2024-05-19 21:31:16,280 | INFO     | -- intersect: -107823065243.01904
[2024-05-19 23:31:37] 2024-05-19 21:31:16,280 | INFO     | intersect: -107823065243.01904
[2024-05-19 23:31:37] 2024-05-19 21:31:16,280 | INFO     | chi2: 4.018038076308556
[2024-05-19 23:31:37] 2024-05-19 21:31:16,281 | INFO     | current chi2=4.018038076308556 (change=16.421122396890077 %)
[2024-05-19 23:31:37] 2024-05-19 21:31:16,281 | INFO     | right removable region: 149
[2024-05-19 23:31:37] 2024-05-19 21:31:16,281 | INFO     | model: linear, x: [1716145170.0, 1716145231.0, 1716145292.0, 1716145353.0, 1716145414.0, 1716145475.0, 1716145536.0, 1716145597.0, 1716145658.0, 1716145719.0, 1716
[2024-05-19 23:31:37] 2024-05-19 21:31:16,281 | INFO     | sum of square deviations: 1046484737.5
[2024-05-19 23:31:37] 2024-05-19 21:31:16,283 | INFO     | sum of deviations: 23343968610.0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,283 | INFO     | mean x: 1716149714.5
[2024-05-19 23:31:37] 2024-05-19 21:31:16,283 | INFO     | mean y: 2280130.92
[2024-05-19 23:31:37] 2024-05-19 21:31:16,283 | INFO     | -- intersect: -38279926603.460075
[2024-05-19 23:31:37] 2024-05-19 21:31:16,283 | INFO     | intersect: -38279926603.460075
[2024-05-19 23:31:37] 2024-05-19 21:31:16,283 | INFO     | chi2: 2.323021534572708
[2024-05-19 23:31:37] 2024-05-19 21:31:16,284 | INFO     | current chi2=2.323021534572708 (change=51.67902124864502 %)
[2024-05-19 23:31:37] 2024-05-19 21:31:16,284 | INFO     | model: linear, x: [1716145475.0, 1716145536.0, 1716145597.0, 1716145658.0, 1716145719.0, 1716145780.0, 1716145841.0, 1716145902.0, 1716145963.0, 1716146024.0, 1716
[2024-05-19 23:31:37] 2024-05-19 21:31:16,284 | INFO     | sum of square deviations: 945282840.0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,285 | INFO     | sum of deviations: -4322382225.000001
[2024-05-19 23:31:37] 2024-05-19 21:31:16,286 | INFO     | mean x: 1716149867.0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,286 | INFO     | mean y: 2321830.8689655173
[2024-05-19 23:31:37] 2024-05-19 21:31:16,286 | INFO     | -- intersect: 7849555872.012583
[2024-05-19 23:31:37] 2024-05-19 21:31:16,286 | INFO     | intersect: 7849555872.012583
[2024-05-19 23:31:37] 2024-05-19 21:31:16,286 | INFO     | chi2: 0.8976762764616957
[2024-05-19 23:31:37] 2024-05-19 21:31:16,286 | INFO     | current chi2=0.8976762764616957 (change=61.35738463454182 %)
[2024-05-19 23:31:37] 2024-05-19 21:31:16,286 | INFO     | model: linear, x: [1716145780.0, 1716145841.0, 1716145902.0, 1716145963.0, 1716146024.0, 1716146085.0, 1716146146.0, 1716146207.0, 1716146268.0, 1716146329.0, 1716
[2024-05-19 23:31:37] 2024-05-19 21:31:16,286 | INFO     | sum of square deviations: 850825255.0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | sum of deviations: -7499003218.999999
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | mean x: 1716150019.5
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | mean y: 2326826.9714285713
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | -- intersect: 15128129034.755459
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | intersect: 15128129034.755459
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | chi2: 0.8353295824691024
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | current chi2=0.8353295824691024 (change=6.945342728487897 %)
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | left removable region: 30
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | model: linear, x: [1716146695.0, 1716146756.0, 1716146817.0, 1716146878.0, 1716146939.0, 1716147000.0, 1716147061.0, 1716147122.0, 1716147183.0, 1716147244.0, 1716
[2024-05-19 23:31:37] 2024-05-19 21:31:16,287 | INFO     | sum of square deviations: 522502820.0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | sum of deviations: 1532141575.0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | mean x: 1716150294.0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | mean y: 2341380.8151260503
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | -- intersect: -5029947659.052397
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | intersect: -5029947659.052397
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | chi2: 0.0004047792420687022
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | -- intersect: -5029947659.052397
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | current memory leak: 2.93 B/s (using 119 data points, chi2=0.00)
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | ..............................
[2024-05-19 23:31:37] 2024-05-19 21:31:16,288 | INFO     | . Timing measurements:
[2024-05-19 23:31:37] 2024-05-19 21:31:16,289 | INFO     | . get job = 0 s
[2024-05-19 23:31:37] 2024-05-19 21:31:16,289 | INFO     | . initial setup = 1 s
[2024-05-19 23:31:37] 2024-05-19 21:31:16,289 | INFO     | . payload setup = 5 s
[2024-05-19 23:31:37] 2024-05-19 21:31:16,289 | INFO     | . stage-in = 0 s
[2024-05-19 23:31:37] 2024-05-19 21:31:16,289 | INFO     | . payload execution = 9407 s
[2024-05-19 23:31:37] 2024-05-19 21:31:16,289 | INFO     | . stage-out = 0 s
[2024-05-19 23:31:37] 2024-05-19 21:31:16,289 | INFO     | . log creation = 0 s
[2024-05-19 23:31:37] 2024-05-19 21:31:16,289 | INFO     | ..............................
[2024-05-19 23:31:37] 2024-05-19 21:31:16,341 | INFO     | 
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | job summary report
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | --------------------------------------------------
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | PanDA job id: 6207470338
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | task id: 38776104
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | errors: (none)
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | pilot state: finished 
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | transexitcode: 0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | exeerrorcode: 0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | exeerrordiag: 
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | exitcode: 0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | exitmsg: OK
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | cpuconsumptiontime: 34805 s
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | nevents: 400
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | neventsw: 0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,342 | INFO     | pid: 4027069
[2024-05-19 23:31:37] 2024-05-19 21:31:16,343 | INFO     | pgrp: 4027069
[2024-05-19 23:31:37] 2024-05-19 21:31:16,343 | INFO     | corecount: 4
[2024-05-19 23:31:37] 2024-05-19 21:31:16,343 | INFO     | event service: False
[2024-05-19 23:31:37] 2024-05-19 21:31:16,343 | INFO     | sizes: {0: 2392048, 1: 2392247, 4: 2392453, 11: 2392481, 9415: 2420871, 9417: 2430037, 9420: 2430151}
[2024-05-19 23:31:37] 2024-05-19 21:31:16,343 | INFO     | --------------------------------------------------
[2024-05-19 23:31:37] 2024-05-19 21:31:16,343 | INFO     | 
[2024-05-19 23:31:37] 2024-05-19 21:31:16,343 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2024-05-19 23:31:37] 2024-05-19 21:31:16,363 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,363 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,363 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,363 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,365 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 23:31:37] 2024-05-19 21:31:16,365 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,365 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 23:31:37] 2024-05-19 21:31:16,365 | INFO     | job 6207470338 has completed (purged errors)
[2024-05-19 23:31:37] 2024-05-19 21:31:16,365 | INFO     | overall cleanup function is called
[2024-05-19 23:31:37] 2024-05-19 21:31:17,371 | INFO     | --- collectZombieJob: --- 10, [4027069]
[2024-05-19 23:31:37] 2024-05-19 21:31:17,371 | INFO     | zombie collector waiting for pid 4027069
[2024-05-19 23:31:37] 2024-05-19 21:31:17,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 23:31:37] 2024-05-19 21:31:18,376 | INFO     | collected zombie processes
[2024-05-19 23:31:37] 2024-05-19 21:31:18,376 | INFO     | will now attempt to kill all subprocesses of pid=4027069
[2024-05-19 23:31:37] 2024-05-19 21:31:18,541 | INFO     | process IDs to be killed: [4027069] (in reverse order)
[2024-05-19 23:31:37] 2024-05-19 21:31:18,646 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 23:31:37] 2024-05-19 21:31:18,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 23:31:37] 2024-05-19 21:31:18,654 | INFO     | did not find any defunct processes belonging to 4027069
[2024-05-19 23:31:37] 2024-05-19 21:31:18,660 | INFO     | did not find any defunct processes belonging to 4027069
[2024-05-19 23:31:37] 2024-05-19 21:31:18,660 | INFO     | ready for new job
[2024-05-19 23:31:37] 2024-05-19 21:31:18,661 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 23:31:37] 2024-05-19 21:31:18,663 | INFO     | *************************************
[2024-05-19 23:31:37] 2024-05-19 21:31:18,663 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 23:31:37] 2024-05-19 21:31:18,663 | INFO     | *************************************
[2024-05-19 23:31:37] 2024-05-19 21:31:18,663 | INFO     | 
[2024-05-19 23:31:37] 2024-05-19 21:31:18,666 | INFO     | architecture information:
[2024-05-19 23:31:37] 2024-05-19 21:31:18,666 | INFO     | executing command: cat /etc/os-release
[2024-05-19 23:31:37] 2024-05-19 21:31:18,682 | INFO     | cat /etc/os-release:
[2024-05-19 23:31:37] NAME="CentOS Linux"
[2024-05-19 23:31:37] VERSION="7 (Core)"
[2024-05-19 23:31:37] ID="centos"
[2024-05-19 23:31:37] ID_LIKE="rhel fedora"
[2024-05-19 23:31:37] VERSION_ID="7"
[2024-05-19 23:31:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 23:31:37] ANSI_COLOR="0;31"
[2024-05-19 23:31:37] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 23:31:37] HOME_URL="https://www.centos.org/"
[2024-05-19 23:31:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 23:31:37] 
[2024-05-19 23:31:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 23:31:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 23:31:37] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 23:31:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 23:31:37] 
[2024-05-19 23:31:37] 2024-05-19 21:31:18,682 | INFO     | *************************************
[2024-05-19 23:31:37] 2024-05-19 21:31:19,184 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2024-05-19 23:31:37] 2024-05-19 21:31:19,208 | INFO     | sufficient remaining disk space (580245258240 B)
[2024-05-19 23:31:37] 2024-05-19 21:31:19,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 23:31:37] 2024-05-19 21:31:19,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 23:31:37] 2024-05-19 21:31:19,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 23:31:37] 2024-05-19 21:31:19,210 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 23:31:37] 2024-05-19 21:31:19,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 23:31:37] 2024-05-19 21:31:19,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 23:31:37] 2024-05-19 21:31:19,211 | INFO     | aborting loop
[2024-05-19 23:31:37] 2024-05-19 21:31:19,211 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 23:31:37] 2024-05-19 21:31:19,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 23:31:37] 2024-05-19 21:31:19,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 23:31:37] 2024-05-19 21:31:19,276 | INFO     | all data control threads have been joined
[2024-05-19 23:31:37] 2024-05-19 21:31:19,660 | INFO     | all payload control threads have been joined
[2024-05-19 23:31:37] 2024-05-19 21:31:19,747 | INFO     | all job control threads have been joined
[2024-05-19 23:31:37] 2024-05-19 21:31:20,214 | INFO     | [job] retrieve thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:20,217 | INFO     | [job] job monitor thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:20,281 | INFO     | [data] control thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:20,666 | INFO     | [payload] control thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:20,752 | INFO     | [job] control thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:20,894 | INFO     | [job] validate thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:21,023 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:21,110 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:21,160 | INFO     | [payload] failed_post thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:21,217 | INFO     | [data] copytool_out thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:21,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 23:31:37] 2024-05-19 21:31:21,457 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:21,676 | INFO     | [payload] validate_post thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:21,689 | INFO     | [data] copytool_in thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:22,357 | INFO     | [job] queue monitor thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:23,217 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:29,890 | INFO     | job.realtimelogging is not enabled
[2024-05-19 23:31:37] 2024-05-19 21:31:30,895 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 23:31:37] 2024-05-19 21:31:31,585 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47666315482176)>', '<ExcThread(monitor, started 47666958436096)>']
[2024-05-19 23:31:37] 2024-05-19 21:31:32,271 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 23:31:37] 2024-05-19 21:31:32,272 | INFO     | [monitor] control thread has ended
[2024-05-19 23:31:37] 2024-05-19 21:31:36,610 | INFO     | all workflow threads have been joined
[2024-05-19 23:31:37] 2024-05-19 21:31:36,610 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 23:31:37] 2024-05-19 21:31:36,611 | INFO     | traces error code: 0
[2024-05-19 23:31:37] 2024-05-19 21:31:36,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 23:31:37] 2024-05-19 21:31:36,689 [wrapper] ==== pilot stdout END ====
[2024-05-19 23:31:37] 2024-05-19 21:31:36,691 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 23:31:37] 2024-05-19 21:31:36,693 [wrapper] pilotpid: 4019998
[2024-05-19 23:31:37] 2024-05-19 21:31:36,697 [wrapper] Pilot exit status: 0
[2024-05-19 23:31:37] 2024-05-19 21:31:36,735 [wrapper] pandaids: 6207470338
[2024-05-19 23:31:37] 2024-05-19 21:31:36,824 [wrapper] cleanup: SIGTERM to supervisor_pilot  123030 4020000
[2024-05-19 23:31:37] 2024-05-19 21:31:36,827 [wrapper] Test setup, not cleaning
[2024-05-19 23:31:37] 2024-05-19 21:31:36,829 [wrapper] ==== wrapper stdout END ====
[2024-05-19 23:31:37] 2024-05-19 21:31:36,831 [wrapper] ==== wrapper stderr END ====
[2024-05-19 23:31:37] 2024-05-19 21:31:36,836 [wrapper] apfmon messages muted
[2024-05-19 23:31:37]  *** Error codes and diagnostics ***
[2024-05-19 23:31:37]     "exeErrorCode": 0,
[2024-05-19 23:31:37]     "exeErrorDiag": "",
[2024-05-19 23:31:37]     "pilotErrorCode": 0,
[2024-05-19 23:31:37]     "pilotErrorDiag": "",
[2024-05-19 23:31:37]  *** Listing of results directory ***
[2024-05-19 23:31:37] total 822728
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc    467845 May 16 18:36 pilot3.tar.gz
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc      5633 May 16 18:46 queuedata.json
[2024-05-19 23:31:37] -rwx------ 1 boinc boinc     32251 May 16 18:46 runpilot2-wrapper.sh
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc       100 May 19 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 23:31:37] -rwxr-xr-x 1 boinc boinc      7986 May 19 20:53 run_atlas
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc       105 May 19 20:53 job.xml
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc      6663 May 19 20:53 init_data.xml
[2024-05-19 23:31:37] -rw-r--r-- 2 boinc boinc 603051129 May 19 20:53 EVNT.38776100._000406.pool.root.1
[2024-05-19 23:31:37] -rw-r--r-- 2 boinc boinc     17537 May 19 20:53 start_atlas.sh
[2024-05-19 23:31:37] drwxrwx--x 2 boinc boinc      4096 May 19 20:53 shared
[2024-05-19 23:31:37] -rw-r--r-- 2 boinc boinc    480008 May 19 20:53 input.tar.gz
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc         0 May 19 20:53 boinc_lockfile
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc      2645 May 19 20:53 pandaJob.out
[2024-05-19 23:31:37] -rw------- 1 boinc boinc       424 May 19 20:53 setup.sh.local
[2024-05-19 23:31:37] -rw------- 1 boinc boinc   1014069 May 19 20:53 agis_schedconf.cvmfs.json
[2024-05-19 23:31:37] -rw------- 1 boinc boinc         0 May 19 20:54 agis_ddmendpoints.agis.ALL.json
[2024-05-19 23:31:37] -rw------- 1 boinc boinc   1324701 May 19 20:54 cric_ddmendpoints.json
[2024-05-19 23:31:37] drwx------ 4 boinc boinc      4096 May 19 20:54 pilot3
[2024-05-19 23:31:37] -rw------- 1 boinc boinc        95 May 19 23:30 pilot_heartbeat.json
[2024-05-19 23:31:37] -rw------- 1 boinc boinc 233266025 May 19 23:30 HITS.38776104._010732.pool.root.1
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc       530 May 19 23:30 boinc_task_state.xml
[2024-05-19 23:31:37] -rw------- 1 boinc boinc      1048 May 19 23:31 memory_monitor_summary.json
[2024-05-19 23:31:37] -rw------- 1 boinc boinc    310312 May 19 23:31 log.38776104._010732.job.log.tgz.1
[2024-05-19 23:31:37] -rw------- 1 boinc boinc      7760 May 19 23:31 heartbeat.json
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc        27 May 19 23:31 wrapper_checkpoint.txt
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc      8192 May 19 23:31 boinc_mmap_file
[2024-05-19 23:31:37] -rw------- 1 boinc boinc      4416 May 19 23:31 pilotlog.txt
[2024-05-19 23:31:37] -rw------- 1 boinc boinc   1004241 May 19 23:31 log.38776104._010732.job.log.1
[2024-05-19 23:31:37] -rw------- 1 boinc boinc       357 May 19 23:31 output.list
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc       620 May 19 23:31 runtime_log
[2024-05-19 23:31:37] -rw------- 1 boinc boinc   1331200 May 19 23:31 result.tar.gz
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc     11409 May 19 23:31 runtime_log.err
[2024-05-19 23:31:37] -rw------- 1 boinc boinc       653 May 19 23:31 iPBNDmXQtR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm6SKKDma1M2Nm.diag
[2024-05-19 23:31:37] -rw-r--r-- 1 boinc boinc     21308 May 19 23:31 stderr.txt
[2024-05-19 23:31:37] HITS file was successfully produced:
[2024-05-19 23:31:37] -rw------- 1 boinc boinc 233266025 May 19 23:30 shared/HITS.pool.root.1
[2024-05-19 23:31:37]  *** Contents of shared directory: ***
[2024-05-19 23:31:37] total 818520
[2024-05-19 23:31:37] -rw-r--r-- 2 boinc boinc 603051129 May 19 20:53 ATLAS.root_0
[2024-05-19 23:31:37] -rw-r--r-- 2 boinc boinc     17537 May 19 20:53 start_atlas.sh
[2024-05-19 23:31:37] -rw-r--r-- 2 boinc boinc    480008 May 19 20:53 input.tar.gz
[2024-05-19 23:31:37] -rw------- 1 boinc boinc 233266025 May 19 23:30 HITS.pool.root.1
[2024-05-19 23:31:37] -rw------- 1 boinc boinc   1331200 May 19 23:31 result.tar.gz
23:31:39 (4015695): run_atlas exited; CPU time 34582.627611
23:31:39 (4015695): called boinc_finish(0)

</stderr_txt>
]]>

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