Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:39:31 (1786697): wrapper (7.7.26015): starting
01:39:31 (1786697): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 01:39:31] Arguments: --nthreads 4
[2024-05-23 01:39:31] Threads: 4
[2024-05-23 01:39:31] Checking for CVMFS
[2024-05-23 01:39:31] No cvmfs_config command found, will try listing directly
[2024-05-23 01:39:31] CVMFS is ok
[2024-05-23 01:39:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 01:39:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 01:39:31] Further information can be found at the LHC@home message board.
[2024-05-23 01:39:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 01:39:31] Checking for apptainer binary...
[2024-05-23 01:39:31] which: no apptainer in ((null))
[2024-05-23 01:39:31] apptainer is not installed, using version from CVMFS
[2024-05-23 01:39:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 01:39:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-23 01:39:32] apptainer works
[2024-05-23 01:39:32] Set ATHENA_PROC_NUMBER=4
[2024-05-23 01:39:32] Set ATHENA_CORE_NUMBER=4
[2024-05-23 01:39:32] Starting ATLAS job with PandaID=6207448626
[2024-05-23 01:39:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-23 04:21:20]  *** The last 200 lines of the pilot log: ***
[2024-05-23 04:21:20] 2024-05-23 02:20:57,711 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-23 04:21:20] 2024-05-23 02:20:57,713 | INFO     | fitting pss+swap vs Time
[2024-05-23 04:21:20] 2024-05-23 02:20:57,713 | INFO     | model: linear, x: [1716421207.0, 1716421268.0, 1716421329.0, 1716421390.0, 1716421451.0, 1716421512.0, 1716421573.0, 1716421634.0, 1716421695.0, 1716421756.0, 1716
[2024-05-23 04:21:20] 2024-05-23 02:20:57,714 | INFO     | sum of square deviations: 1246386160.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,714 | INFO     | sum of deviations: 55848236032.99999
[2024-05-23 04:21:20] 2024-05-23 02:20:57,714 | INFO     | mean x: 1716426026.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,714 | INFO     | mean y: 2256402.817610063
[2024-05-23 04:21:20] 2024-05-23 02:20:57,714 | INFO     | -- intersect: -76907588161.91357
[2024-05-23 04:21:20] 2024-05-23 02:20:57,714 | INFO     | intersect: -76907588161.91357
[2024-05-23 04:21:20] 2024-05-23 02:20:57,714 | INFO     | chi2: 4.75284480312573
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | model: linear, x: [1716421207.0, 1716421268.0, 1716421329.0, 1716421390.0, 1716421451.0, 1716421512.0, 1716421573.0, 1716421634.0, 1716421695.0, 1716421756.0, 1716
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | sum of square deviations: 1132458442.5
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | sum of deviations: 63562918354.99999
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | mean x: 1716425873.5
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | mean y: 2266391.883116883
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | -- intersect: -96337725933.87505
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | intersect: -96337725933.87505
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | chi2: 4.002842920346473
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | current chi2=4.002842920346473 (change=15.7800625487711 %)
[2024-05-23 04:21:20] 2024-05-23 02:20:57,715 | INFO     | right removable region: 153
[2024-05-23 04:21:20] 2024-05-23 02:20:57,716 | INFO     | model: linear, x: [1716421512.0, 1716421573.0, 1716421634.0, 1716421695.0, 1716421756.0, 1716421817.0, 1716421878.0, 1716421939.0, 1716422000.0, 1716422061.0, 1716
[2024-05-23 04:21:20] 2024-05-23 02:20:57,716 | INFO     | sum of square deviations: 1132458442.5
[2024-05-23 04:21:20] 2024-05-23 02:20:57,716 | INFO     | sum of deviations: 19979220871.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,716 | INFO     | mean x: 1716426178.5
[2024-05-23 04:21:20] 2024-05-23 02:20:57,716 | INFO     | mean y: 2304249.3766233767
[2024-05-23 04:21:20] 2024-05-23 02:20:57,716 | INFO     | -- intersect: -30279476027.976
[2024-05-23 04:21:20] 2024-05-23 02:20:57,716 | INFO     | intersect: -30279476027.976
[2024-05-23 04:21:20] 2024-05-23 02:20:57,716 | INFO     | chi2: 2.298398606676631
[2024-05-23 04:21:20] 2024-05-23 02:20:57,717 | INFO     | current chi2=2.298398606676631 (change=51.64162303037796 %)
[2024-05-23 04:21:20] 2024-05-23 02:20:57,717 | INFO     | model: linear, x: [1716421817.0, 1716421878.0, 1716421939.0, 1716422000.0, 1716422061.0, 1716422122.0, 1716422183.0, 1716422244.0, 1716422305.0, 1716422366.0, 1716
[2024-05-23 04:21:20] 2024-05-23 02:20:57,717 | INFO     | sum of square deviations: 1025693650.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,717 | INFO     | sum of deviations: -8856619036.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,717 | INFO     | mean x: 1716426331.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,717 | INFO     | mean y: 2345446.879194631
[2024-05-23 04:21:20] 2024-05-23 02:20:57,717 | INFO     | -- intersect: 14823275767.571182
[2024-05-23 04:21:20] 2024-05-23 02:20:57,717 | INFO     | intersect: 14823275767.571182
[2024-05-23 04:21:20] 2024-05-23 02:20:57,717 | INFO     | chi2: 0.8358960448335059
[2024-05-23 04:21:20] 2024-05-23 02:20:57,718 | INFO     | current chi2=0.8358960448335059 (change=63.631371755738684 %)
[2024-05-23 04:21:20] 2024-05-23 02:20:57,718 | INFO     | model: linear, x: [1716422122.0, 1716422183.0, 1716422244.0, 1716422305.0, 1716422366.0, 1716422427.0, 1716422488.0, 1716422549.0, 1716422610.0, 1716422671.0, 1716
[2024-05-23 04:21:20] 2024-05-23 02:20:57,718 | INFO     | sum of square deviations: 925859220.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,718 | INFO     | sum of deviations: -11038018259.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,718 | INFO     | mean x: 1716426483.5
[2024-05-23 04:21:20] 2024-05-23 02:20:57,718 | INFO     | mean y: 2348686.277777778
[2024-05-23 04:21:20] 2024-05-23 02:20:57,718 | INFO     | -- intersect: 20465445511.19697
[2024-05-23 04:21:20] 2024-05-23 02:20:57,718 | INFO     | intersect: 20465445511.19697
[2024-05-23 04:21:20] 2024-05-23 02:20:57,718 | INFO     | chi2: 0.8007677151555799
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | current chi2=0.8007677151555799 (change=4.202475881426485 %)
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | left removable region: 30
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | model: linear, x: [1716423037.0, 1716423098.0, 1716423159.0, 1716423220.0, 1716423281.0, 1716423342.0, 1716423403.0, 1716423464.0, 1716423525.0, 1716423586.0, 1716
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | sum of square deviations: 576985702.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | sum of deviations: 448013097.00000006
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | mean x: 1716426758.0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | mean y: 2358208.048780488
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | -- intersect: -1330398678.2306123
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | intersect: -1330398678.2306123
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | chi2: 0.0030079725409066925
[2024-05-23 04:21:20] 2024-05-23 02:20:57,719 | INFO     | -- intersect: -1330398678.2306123
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | current memory leak: 0.78 B/s (using 123 data points, chi2=0.00)
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | ..............................
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | . Timing measurements:
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | . get job = 0 s
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | . initial setup = 1 s
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | . payload setup = 5 s
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | . stage-in = 0 s
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | . payload execution = 9643 s
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | . stage-out = 0 s
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | . log creation = 0 s
[2024-05-23 04:21:20] 2024-05-23 02:20:57,720 | INFO     | ..............................
[2024-05-23 04:21:20] 2024-05-23 02:20:57,919 | INFO     | 
[2024-05-23 04:21:20] 2024-05-23 02:20:57,919 | INFO     | job summary report
[2024-05-23 04:21:20] 2024-05-23 02:20:57,919 | INFO     | --------------------------------------------------
[2024-05-23 04:21:20] 2024-05-23 02:20:57,919 | INFO     | PanDA job id: 6207448626
[2024-05-23 04:21:20] 2024-05-23 02:20:57,919 | INFO     | task id: 38776146
[2024-05-23 04:21:20] 2024-05-23 02:20:57,919 | INFO     | errors: (none)
[2024-05-23 04:21:20] 2024-05-23 02:20:57,919 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | pilot state: finished 
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | transexitcode: 0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | exeerrorcode: 0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | exeerrordiag: 
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | exitcode: 0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | exitmsg: OK
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | cpuconsumptiontime: 35901 s
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | nevents: 400
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | neventsw: 0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | pid: 1800078
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | pgrp: 1800078
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | corecount: 4
[2024-05-23 04:21:20] 2024-05-23 02:20:57,920 | INFO     | event service: False
[2024-05-23 04:21:20] 2024-05-23 02:20:57,921 | INFO     | sizes: {0: 2383794, 4: 2384000, 11: 2384028, 9653: 2412477, 9654: 2421459, 9657: 2421515, 9662: 2421813}
[2024-05-23 04:21:20] 2024-05-23 02:20:57,921 | INFO     | --------------------------------------------------
[2024-05-23 04:21:20] 2024-05-23 02:20:57,921 | INFO     | 
[2024-05-23 04:21:20] 2024-05-23 02:20:57,921 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2024-05-23 04:21:20] 2024-05-23 02:20:57,941 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,942 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | job 6207448626 has completed (purged errors)
[2024-05-23 04:21:20] 2024-05-23 02:20:57,943 | INFO     | overall cleanup function is called
[2024-05-23 04:21:20] 2024-05-23 02:20:58,951 | INFO     | --- collectZombieJob: --- 10, [1800078]
[2024-05-23 04:21:20] 2024-05-23 02:20:58,952 | INFO     | zombie collector waiting for pid 1800078
[2024-05-23 04:21:20] 2024-05-23 02:20:58,952 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-23 04:21:20] 2024-05-23 02:20:59,955 | INFO     | collected zombie processes
[2024-05-23 04:21:20] 2024-05-23 02:20:59,955 | INFO     | will now attempt to kill all subprocesses of pid=1800078
[2024-05-23 04:21:20] 2024-05-23 02:21:00,159 | INFO     | process IDs to be killed: [1800078] (in reverse order)
[2024-05-23 04:21:20] 2024-05-23 02:21:00,326 | WARNING  | found no corresponding commands to process id(s)
[2024-05-23 04:21:20] 2024-05-23 02:21:00,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-23 04:21:20] 2024-05-23 02:21:00,346 | INFO     | did not find any defunct processes belonging to 1800078
[2024-05-23 04:21:20] 2024-05-23 02:21:00,369 | INFO     | did not find any defunct processes belonging to 1800078
[2024-05-23 04:21:20] 2024-05-23 02:21:00,369 | INFO     | ready for new job
[2024-05-23 04:21:20] 2024-05-23 02:21:00,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-23 04:21:20] 2024-05-23 02:21:00,372 | INFO     | *************************************
[2024-05-23 04:21:20] 2024-05-23 02:21:00,372 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-23 04:21:20] 2024-05-23 02:21:00,372 | INFO     | *************************************
[2024-05-23 04:21:20] 2024-05-23 02:21:00,372 | INFO     | 
[2024-05-23 04:21:20] 2024-05-23 02:21:00,380 | INFO     | architecture information:
[2024-05-23 04:21:20] 2024-05-23 02:21:00,381 | INFO     | executing command: cat /etc/os-release
[2024-05-23 04:21:20] 2024-05-23 02:21:00,397 | INFO     | cat /etc/os-release:
[2024-05-23 04:21:20] NAME="CentOS Linux"
[2024-05-23 04:21:20] VERSION="7 (Core)"
[2024-05-23 04:21:20] ID="centos"
[2024-05-23 04:21:20] ID_LIKE="rhel fedora"
[2024-05-23 04:21:20] VERSION_ID="7"
[2024-05-23 04:21:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-23 04:21:20] ANSI_COLOR="0;31"
[2024-05-23 04:21:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-23 04:21:20] HOME_URL="https://www.centos.org/"
[2024-05-23 04:21:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-23 04:21:20] 
[2024-05-23 04:21:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-23 04:21:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-23 04:21:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-23 04:21:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-23 04:21:20] 
[2024-05-23 04:21:20] 2024-05-23 02:21:00,397 | INFO     | *************************************
[2024-05-23 04:21:20] 2024-05-23 02:21:00,900 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2024-05-23 04:21:20] 2024-05-23 02:21:00,922 | INFO     | sufficient remaining disk space (3024686678016 B)
[2024-05-23 04:21:20] 2024-05-23 02:21:00,923 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-23 04:21:20] 2024-05-23 02:21:00,923 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-23 04:21:20] 2024-05-23 02:21:00,923 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-23 04:21:20] 2024-05-23 02:21:00,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-23 04:21:20] 2024-05-23 02:21:00,924 | INFO     | found 0 job(s) in 20 queues
[2024-05-23 04:21:20] 2024-05-23 02:21:00,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-23 04:21:20] 2024-05-23 02:21:00,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-23 04:21:20] 2024-05-23 02:21:01,075 | INFO     | all payload control threads have been joined
[2024-05-23 04:21:20] 2024-05-23 02:21:01,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-23 04:21:20] 2024-05-23 02:21:01,160 | INFO     | aborting loop
[2024-05-23 04:21:20] 2024-05-23 02:21:01,360 | INFO     | all job control threads have been joined
[2024-05-23 04:21:20] 2024-05-23 02:21:01,462 | INFO     | all data control threads have been joined
[2024-05-23 04:21:20] 2024-05-23 02:21:01,928 | INFO     | [job] retrieve thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,016 | INFO     | [data] copytool_in thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,050 | INFO     | [job] validate thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,057 | INFO     | [payload] validate_pre thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,057 | INFO     | [job] create_data_payload thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,081 | INFO     | [payload] control thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,166 | INFO     | [job] job monitor thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,366 | INFO     | [job] control thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,467 | INFO     | [data] control thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,571 | INFO     | [payload] validate_post thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:02,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-23 04:21:20] 2024-05-23 02:21:02,930 | INFO     | [data] copytool_out thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:03,117 | INFO     | [payload] failed_post thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:03,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-23 04:21:20] 2024-05-23 02:21:03,195 | INFO     | [payload] execute_payloads thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:03,806 | INFO     | [job] queue monitor thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:07,157 | INFO     | [data] queue_monitor thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:11,655 | INFO     | job.realtimelogging is not enabled
[2024-05-23 04:21:20] 2024-05-23 02:21:12,660 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-23 04:21:20] 2024-05-23 02:21:14,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47536806462528)>', '<ExcThread(monitor, started 47537044080384)>']
[2024-05-23 04:21:20] 2024-05-23 02:21:14,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-23 04:21:20] 2024-05-23 02:21:14,995 | INFO     | [monitor] control thread has ended
[2024-05-23 04:21:20] 2024-05-23 02:21:19,145 | INFO     | all workflow threads have been joined
[2024-05-23 04:21:20] 2024-05-23 02:21:19,145 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-23 04:21:20] 2024-05-23 02:21:19,146 | INFO     | traces error code: 0
[2024-05-23 04:21:20] 2024-05-23 02:21:19,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-23 04:21:20] 2024-05-23 02:21:19,228 [wrapper] ==== pilot stdout END ====
[2024-05-23 04:21:20] 2024-05-23 02:21:19,230 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-23 04:21:20] 2024-05-23 02:21:19,232 [wrapper] pilotpid: 1791556
[2024-05-23 04:21:20] 2024-05-23 02:21:19,234 [wrapper] Pilot exit status: 0
[2024-05-23 04:21:20] 2024-05-23 02:21:19,241 [wrapper] pandaids: 6207448626
[2024-05-23 04:21:20] 2024-05-23 02:21:19,331 [wrapper] cleanup: SIGTERM to supervisor_pilot 2909725 1791557
[2024-05-23 04:21:20] 2024-05-23 02:21:19,333 [wrapper] Test setup, not cleaning
[2024-05-23 04:21:20] 2024-05-23 02:21:19,335 [wrapper] ==== wrapper stdout END ====
[2024-05-23 04:21:20] 2024-05-23 02:21:19,338 [wrapper] ==== wrapper stderr END ====
[2024-05-23 04:21:20] 2024-05-23 02:21:19,343 [wrapper] apfmon messages muted
[2024-05-23 04:21:20]  *** Error codes and diagnostics ***
[2024-05-23 04:21:20]     "exeErrorCode": 0,
[2024-05-23 04:21:20]     "exeErrorDiag": "",
[2024-05-23 04:21:20]     "pilotErrorCode": 0,
[2024-05-23 04:21:20]     "pilotErrorDiag": "",
[2024-05-23 04:21:20]  *** Listing of results directory ***
[2024-05-23 04:21:20] total 880384
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc    467845 May 16 17:56 pilot3.tar.gz
[2024-05-23 04:21:20] -rwx------ 1 boinc boinc     32251 May 16 18:21 runpilot2-wrapper.sh
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc      5633 May 16 18:21 queuedata.json
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc       100 May 23 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-23 04:21:20] -rwxr-xr-x 1 boinc boinc      7986 May 23 01:37 run_atlas
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc       105 May 23 01:37 job.xml
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc      6644 May 23 01:39 init_data.xml
[2024-05-23 04:21:20] -rw-r--r-- 2 boinc boinc 614978110 May 23 01:39 EVNT.38776140._000227.pool.root.1
[2024-05-23 04:21:20] -rw-r--r-- 2 boinc boinc     17537 May 23 01:39 start_atlas.sh
[2024-05-23 04:21:20] drwxrwx--x 2 boinc boinc      4096 May 23 01:39 shared
[2024-05-23 04:21:20] -rw-r--r-- 2 boinc boinc    479996 May 23 01:39 input.tar.gz
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc         0 May 23 01:39 boinc_lockfile
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc      2614 May 23 01:39 pandaJob.out
[2024-05-23 04:21:20] -rw------- 1 boinc boinc       424 May 23 01:39 setup.sh.local
[2024-05-23 04:21:20] -rw------- 1 boinc boinc   1011694 May 23 01:39 agis_schedconf.cvmfs.json
[2024-05-23 04:21:20] -rw------- 1 boinc boinc         0 May 23 01:39 agis_ddmendpoints.agis.ALL.json
[2024-05-23 04:21:20] -rw------- 1 boinc boinc   1319723 May 23 01:39 cric_ddmendpoints.json
[2024-05-23 04:21:20] drwx------ 4 boinc boinc      4096 May 23 01:39 pilot3
[2024-05-23 04:21:20] -rw------- 1 boinc boinc        95 May 23 04:20 pilot_heartbeat.json
[2024-05-23 04:21:20] -rw------- 1 boinc boinc 280404085 May 23 04:20 HITS.38776146._014360.pool.root.1
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc       531 May 23 04:20 boinc_task_state.xml
[2024-05-23 04:21:20] -rw------- 1 boinc boinc      1049 May 23 04:20 memory_monitor_summary.json
[2024-05-23 04:21:20] -rw------- 1 boinc boinc    296105 May 23 04:20 log.38776146._014360.job.log.tgz.1
[2024-05-23 04:21:20] -rw------- 1 boinc boinc      7722 May 23 04:20 heartbeat.json
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc      8192 May 23 04:21 boinc_mmap_file
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc        27 May 23 04:21 wrapper_checkpoint.txt
[2024-05-23 04:21:20] -rw------- 1 boinc boinc      4417 May 23 04:21 pilotlog.txt
[2024-05-23 04:21:20] -rw------- 1 boinc boinc   1007424 May 23 04:21 log.38776146._014360.job.log.1
[2024-05-23 04:21:20] -rw------- 1 boinc boinc       357 May 23 04:21 output.list
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc       620 May 23 04:21 runtime_log
[2024-05-23 04:21:20] -rw------- 1 boinc boinc   1320960 May 23 04:21 result.tar.gz
[2024-05-23 04:21:20] -rw------- 1 boinc boinc       656 May 23 04:21 zb2NDmZ2sR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmznPKDm3WEDIo.diag
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc     11409 May 23 04:21 runtime_log.err
[2024-05-23 04:21:20] -rw-r--r-- 1 boinc boinc     21306 May 23 04:21 stderr.txt
[2024-05-23 04:21:20] HITS file was successfully produced:
[2024-05-23 04:21:20] -rw------- 1 boinc boinc 280404085 May 23 04:20 shared/HITS.pool.root.1
[2024-05-23 04:21:20]  *** Contents of shared directory: ***
[2024-05-23 04:21:20] total 876196
[2024-05-23 04:21:20] -rw-r--r-- 2 boinc boinc 614978110 May 23 01:39 ATLAS.root_0
[2024-05-23 04:21:20] -rw-r--r-- 2 boinc boinc     17537 May 23 01:39 start_atlas.sh
[2024-05-23 04:21:20] -rw-r--r-- 2 boinc boinc    479996 May 23 01:39 input.tar.gz
[2024-05-23 04:21:20] -rw------- 1 boinc boinc 280404085 May 23 04:20 HITS.pool.root.1
[2024-05-23 04:21:20] -rw------- 1 boinc boinc   1320960 May 23 04:21 result.tar.gz
04:21:21 (1786697): run_atlas exited; CPU time 35674.081257
04:21:21 (1786697): called boinc_finish(0)

</stderr_txt>
]]>

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