Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
06:00:24 (231249): wrapper (7.7.26015): starting
06:00:24 (231249): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 06:00:24] Arguments: --nthreads 12
[2024-05-17 06:00:24] Threads: 12
[2024-05-17 06:00:24] Checking for CVMFS
[2024-05-17 06:00:25] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 06:00:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 06:00:25] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 06:00:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 06:00:25] 2.10.1.0 276469 183513 143816 132841 3 65 33057804 45568001 3811 130560 0 626949279 99.753 414303753 3034 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 06:00:25] CVMFS is ok
[2024-05-17 06:00:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 06:00:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 06:00:25] Further information can be found at the LHC@home message board.
[2024-05-17 06:00:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 06:00:25] Checking for apptainer binary...
[2024-05-17 06:00:25] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 06:00:25] Running /usr/bin/apptainer --version
[2024-05-17 06:00:25] apptainer version 1.1.8-1.el7
[2024-05-17 06:00:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 06:00:26] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0025.triumf.lcg
[2024-05-17 06:00:26] apptainer works
[2024-05-17 06:00:26] Set ATHENA_PROC_NUMBER=12
[2024-05-17 06:00:26] Set ATHENA_CORE_NUMBER=12
[2024-05-17 06:00:26] Starting ATLAS job with PandaID=6207432033
[2024-05-17 06:00:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 07:38:46]  *** The last 200 lines of the pilot log: ***
[2024-05-17 07:38:46]  is_tar=False
[2024-05-17 07:38:46]  lfn=log.38920987._001450.job.log.tgz.1
[2024-05-17 07:38:46]  mtime=0
[2024-05-17 07:38:46]  protocol_id=None
[2024-05-17 07:38:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 07:38:46]  replicas=None
[2024-05-17 07:38:46]  scope=mc23_13p6TeV
[2024-05-17 07:38:46]  status=None
[2024-05-17 07:38:46]  status_code=0
[2024-05-17 07:38:46]  storage_token=
[2024-05-17 07:38:46]  surl=/home/boinc/slots/0/PanDA_Pilot-6207432033/log.38920987._001450.job.log.tgz.1
[2024-05-17 07:38:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/49/log.38920987._001450.job.log.tgz.1
[2024-05-17 07:38:46]  workdir=None
[2024-05-17 07:38:46] ]
[2024-05-17 07:38:46] 2024-05-17 14:38:12,745 | INFO     | transferring file log.38920987._001450.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207432033/log.38920987._001450.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 07:38:46] 2024-05-17 14:38:12,745 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207432033/log.38920987._001450.job.log.tgz.1 /home/boinc/slots/0/log.38920987._001450.job.log.t
[2024-05-17 07:38:46] 2024-05-17 14:38:12,772 | INFO     | adding to output.list: log.38920987._001450.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/49/log.38920987._001450.job.log.tg
[2024-05-17 07:38:46] 2024-05-17 14:38:12,773 | INFO     | summary of transferred files:
[2024-05-17 07:38:46] 2024-05-17 14:38:12,773 | INFO     |  -- lfn=log.38920987._001450.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 07:38:46] 2024-05-17 14:38:12,773 | INFO     | stage-out finished correctly
[2024-05-17 07:38:46] 2024-05-17 14:38:15,359 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 07:38:46] 2024-05-17 14:38:17,505 | INFO     | job 6207432033 has state=finished
[2024-05-17 07:38:46] 2024-05-17 14:38:17,506 | INFO     | preparing for final server update for job 6207432033 in state='finished'
[2024-05-17 07:38:46] 2024-05-17 14:38:17,572 | WARNING  | process 243981 is no longer using CPU - aborting
[2024-05-17 07:38:46] 2024-05-17 14:38:17,572 | INFO     | will not send any job update
[2024-05-17 07:38:46] 2024-05-17 14:38:17,813 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-17 07:38:46] 2024-05-17 14:38:17,813 | INFO     | this job has now completed (state=finished)
[2024-05-17 07:38:46] 2024-05-17 14:38:17,813 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 07:38:46] 2024-05-17 14:38:17,814 | INFO     | job 6207432033 has finished - writing final server update
[2024-05-17 07:38:46] 2024-05-17 14:38:17,814 | INFO     | total number of processed events: 400 (read)
[2024-05-17 07:38:46] 2024-05-17 14:38:17,821 | INFO     | executing command: lscpu
[2024-05-17 07:38:46] 2024-05-17 14:38:17,889 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 07:38:46] 2024-05-17 14:38:17,890 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 07:38:46] 2024-05-17 14:38:17,951 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 07:38:46] 2024-05-17 14:38:20,076 | INFO     | monitor loop #461: job 0:6207432033 is in state 'finished'
[2024-05-17 07:38:46] 2024-05-17 14:38:20,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 07:38:46] 2024-05-17 14:38:22,580 | INFO     | monitor loop #462: job 0:6207432033 is in state 'finished'
[2024-05-17 07:38:46] 2024-05-17 14:38:22,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 07:38:46] 2024-05-17 14:38:25,084 | INFO     | monitor loop #463: job 0:6207432033 is in state 'finished'
[2024-05-17 07:38:46] 2024-05-17 14:38:25,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 07:38:46] 2024-05-17 14:38:27,588 | INFO     | monitor loop #464: job 0:6207432033 is in state 'finished'
[2024-05-17 07:38:46] 2024-05-17 14:38:27,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 07:38:46] 2024-05-17 14:38:29,805 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 07:38:46] 2024-05-17 14:38:29,806 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207432033/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 07:38:46] 2024-05-17 14:38:29,808 | INFO     | extracted standard info from prmon json
[2024-05-17 07:38:46] 2024-05-17 14:38:29,808 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 07:38:46] 2024-05-17 14:38:29,808 | WARNING  | GPU info not found in prmon json
[2024-05-17 07:38:46] 2024-05-17 14:38:29,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 07:38:46] 2024-05-17 14:38:29,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 07:38:46] 2024-05-17 14:38:29,812 | INFO     | fitting pss+swap vs Time
[2024-05-17 07:38:46] 2024-05-17 14:38:29,813 | INFO     | model: linear, x: [1715951168.0, 1715951229.0, 1715951290.0, 1715951351.0, 1715951412.0, 1715951473.0, 1715951534.0, 1715951595.0, 1715951656.0, 1715951717.0, 1715
[2024-05-17 07:38:46] 2024-05-17 14:38:29,813 | INFO     | sum of square deviations: 218571540.0
[2024-05-17 07:38:46] 2024-05-17 14:38:29,814 | INFO     | sum of deviations: 30624440061.000004
[2024-05-17 07:38:46] 2024-05-17 14:38:29,814 | INFO     | mean x: 1715953852.0
[2024-05-17 07:38:46] 2024-05-17 14:38:29,814 | INFO     | mean y: 2660042.95505618
[2024-05-17 07:38:46] 2024-05-17 14:38:29,814 | INFO     | -- intersect: -240422629946.8399
[2024-05-17 07:38:46] 2024-05-17 14:38:29,814 | INFO     | intersect: -240422629946.8399
[2024-05-17 07:38:46] 2024-05-17 14:38:29,814 | INFO     | chi2: 1.9875731510337011
[2024-05-17 07:38:46] 2024-05-17 14:38:29,815 | INFO     | -- intersect: -240422629946.8399
[2024-05-17 07:38:46] 2024-05-17 14:38:29,815 | INFO     | current memory leak: 140.11 B/s (using 89 data points, chi2=1.99)
[2024-05-17 07:38:46] 2024-05-17 14:38:29,815 | INFO     | ..............................
[2024-05-17 07:38:46] 2024-05-17 14:38:29,815 | INFO     | . Timing measurements:
[2024-05-17 07:38:46] 2024-05-17 14:38:29,816 | INFO     | . get job = 0 s
[2024-05-17 07:38:46] 2024-05-17 14:38:29,816 | INFO     | . initial setup = 1 s
[2024-05-17 07:38:46] 2024-05-17 14:38:29,816 | INFO     | . payload setup = 5 s
[2024-05-17 07:38:46] 2024-05-17 14:38:29,816 | INFO     | . stage-in = 0 s
[2024-05-17 07:38:46] 2024-05-17 14:38:29,816 | INFO     | . payload execution = 5829 s
[2024-05-17 07:38:46] 2024-05-17 14:38:29,816 | INFO     | . stage-out = 0 s
[2024-05-17 07:38:46] 2024-05-17 14:38:29,816 | INFO     | . log creation = 0 s
[2024-05-17 07:38:46] 2024-05-17 14:38:29,816 | INFO     | ..............................
[2024-05-17 07:38:46] 2024-05-17 14:38:29,909 | INFO     | 
[2024-05-17 07:38:46] 2024-05-17 14:38:29,909 | INFO     | job summary report
[2024-05-17 07:38:46] 2024-05-17 14:38:29,909 | INFO     | --------------------------------------------------
[2024-05-17 07:38:46] 2024-05-17 14:38:29,910 | INFO     | PanDA job id: 6207432033
[2024-05-17 07:38:46] 2024-05-17 14:38:29,910 | INFO     | task id: 38920987
[2024-05-17 07:38:46] 2024-05-17 14:38:29,910 | INFO     | errors: (none)
[2024-05-17 07:38:46] 2024-05-17 14:38:29,910 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 07:38:46] 2024-05-17 14:38:29,910 | INFO     | pilot state: finished 
[2024-05-17 07:38:46] 2024-05-17 14:38:29,910 | INFO     | transexitcode: 0
[2024-05-17 07:38:46] 2024-05-17 14:38:29,910 | INFO     | exeerrorcode: 0
[2024-05-17 07:38:46] 2024-05-17 14:38:29,910 | INFO     | exeerrordiag: 
[2024-05-17 07:38:46] 2024-05-17 14:38:29,911 | INFO     | exitcode: 0
[2024-05-17 07:38:46] 2024-05-17 14:38:29,911 | INFO     | exitmsg: OK
[2024-05-17 07:38:46] 2024-05-17 14:38:29,911 | INFO     | cpuconsumptiontime: 57136 s
[2024-05-17 07:38:46] 2024-05-17 14:38:29,911 | INFO     | nevents: 400
[2024-05-17 07:38:46] 2024-05-17 14:38:29,911 | INFO     | neventsw: 0
[2024-05-17 07:38:46] 2024-05-17 14:38:29,911 | INFO     | pid: 243981
[2024-05-17 07:38:46] 2024-05-17 14:38:29,911 | INFO     | pgrp: 243981
[2024-05-17 07:38:46] 2024-05-17 14:38:29,911 | INFO     | corecount: 12
[2024-05-17 07:38:46] 2024-05-17 14:38:29,911 | INFO     | event service: False
[2024-05-17 07:38:46] 2024-05-17 14:38:29,912 | INFO     | sizes: {0: 2391210, 1: 2392145, 5: 2392351, 12: 2392407, 5838: 2419073, 5840: 2428027, 5842: 2428211, 5857: 2428381}
[2024-05-17 07:38:46] 2024-05-17 14:38:29,912 | INFO     | --------------------------------------------------
[2024-05-17 07:38:46] 2024-05-17 14:38:29,912 | INFO     | 
[2024-05-17 07:38:46] 2024-05-17 14:38:29,912 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 07:38:46] 2024-05-17 14:38:29,944 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,944 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,944 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,945 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,946 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 07:38:46] 2024-05-17 14:38:29,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,946 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 07:38:46] 2024-05-17 14:38:29,947 | INFO     | job 6207432033 has completed (purged errors)
[2024-05-17 07:38:46] 2024-05-17 14:38:29,947 | INFO     | overall cleanup function is called
[2024-05-17 07:38:46] 2024-05-17 14:38:30,956 | INFO     | --- collectZombieJob: --- 10, [243981]
[2024-05-17 07:38:46] 2024-05-17 14:38:30,956 | INFO     | zombie collector waiting for pid 243981
[2024-05-17 07:38:46] 2024-05-17 14:38:30,957 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 07:38:46] 2024-05-17 14:38:31,962 | INFO     | collected zombie processes
[2024-05-17 07:38:46] 2024-05-17 14:38:31,963 | INFO     | will now attempt to kill all subprocesses of pid=243981
[2024-05-17 07:38:46] 2024-05-17 14:38:32,079 | INFO     | process IDs to be killed: [243981] (in reverse order)
[2024-05-17 07:38:46] 2024-05-17 14:38:32,195 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 07:38:46] 2024-05-17 14:38:32,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 07:38:46] 2024-05-17 14:38:32,204 | INFO     | did not find any defunct processes belonging to 243981
[2024-05-17 07:38:46] 2024-05-17 14:38:32,210 | INFO     | did not find any defunct processes belonging to 243981
[2024-05-17 07:38:46] 2024-05-17 14:38:32,211 | INFO     | ready for new job
[2024-05-17 07:38:46] 2024-05-17 14:38:32,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 07:38:46] 2024-05-17 14:38:32,213 | INFO     | *************************************
[2024-05-17 07:38:46] 2024-05-17 14:38:32,213 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 07:38:46] 2024-05-17 14:38:32,213 | INFO     | *************************************
[2024-05-17 07:38:46] 2024-05-17 14:38:32,213 | INFO     | 
[2024-05-17 07:38:46] 2024-05-17 14:38:32,218 | INFO     | architecture information:
[2024-05-17 07:38:46] 2024-05-17 14:38:32,219 | INFO     | executing command: cat /etc/os-release
[2024-05-17 07:38:46] 2024-05-17 14:38:32,241 | INFO     | cat /etc/os-release:
[2024-05-17 07:38:46] NAME="CentOS Linux"
[2024-05-17 07:38:46] VERSION="7 (Core)"
[2024-05-17 07:38:46] ID="centos"
[2024-05-17 07:38:46] ID_LIKE="rhel fedora"
[2024-05-17 07:38:46] VERSION_ID="7"
[2024-05-17 07:38:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 07:38:46] ANSI_COLOR="0;31"
[2024-05-17 07:38:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 07:38:46] HOME_URL="https://www.centos.org/"
[2024-05-17 07:38:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 07:38:46] 
[2024-05-17 07:38:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 07:38:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 07:38:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 07:38:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 07:38:46] 
[2024-05-17 07:38:46] 2024-05-17 14:38:32,242 | INFO     | *************************************
[2024-05-17 07:38:46] 2024-05-17 14:38:32,745 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 07:38:46] 2024-05-17 14:38:32,772 | INFO     | sufficient remaining disk space (2234971586560 B)
[2024-05-17 07:38:46] 2024-05-17 14:38:32,772 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 07:38:46] 2024-05-17 14:38:32,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 07:38:46] 2024-05-17 14:38:32,993 | INFO     | all data control threads have been joined
[2024-05-17 07:38:46] 2024-05-17 14:38:33,274 | INFO     | all payload control threads have been joined
[2024-05-17 07:38:46] 2024-05-17 14:38:33,355 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 07:38:46] 2024-05-17 14:38:33,417 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 07:38:46] 2024-05-17 14:38:33,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 07:38:46] 2024-05-17 14:38:33,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 07:38:46] 2024-05-17 14:38:33,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 07:38:46] 2024-05-17 14:38:33,607 | INFO     | aborting loop
[2024-05-17 07:38:46] 2024-05-17 14:38:33,781 | INFO     | [job] retrieve thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:33,815 | INFO     | [payload] failed_post thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:33,951 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:33,999 | INFO     | [data] control thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:34,279 | INFO     | [payload] control thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:34,362 | INFO     | [data] copytool_in thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:34,398 | INFO     | all job control threads have been joined
[2024-05-17 07:38:46] 2024-05-17 14:38:34,613 | INFO     | [job] job monitor thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:34,623 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:34,626 | INFO     | [payload] validate_post thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:34,851 | INFO     | [job] validate thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:34,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 07:38:46] 2024-05-17 14:38:34,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 07:38:46] 2024-05-17 14:38:35,008 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:35,120 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:35,362 | INFO     | [data] copytool_out thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:35,404 | INFO     | [job] control thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:35,932 | INFO     | [job] queue monitor thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:38,980 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 07:38:46] 2024-05-17 14:38:40,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139823266555712)>', '<ExcThread(monitor, started 139822710642432)>']
[2024-05-17 07:38:46] 2024-05-17 14:38:41,459 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 07:38:46] 2024-05-17 14:38:41,459 | INFO     | [monitor] control thread has ended
[2024-05-17 07:38:46] 2024-05-17 14:38:45,749 | INFO     | all workflow threads have been joined
[2024-05-17 07:38:46] 2024-05-17 14:38:45,749 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 07:38:46] 2024-05-17 14:38:45,749 | INFO     | traces error code: 0
[2024-05-17 07:38:46] 2024-05-17 14:38:45,750 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 07:38:46] 2024-05-17 14:38:45,850 [wrapper] ==== pilot stdout END ====
[2024-05-17 07:38:46] 2024-05-17 14:38:45,855 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 07:38:46] 2024-05-17 14:38:45,859 [wrapper] pilotpid: 235577
[2024-05-17 07:38:46] 2024-05-17 14:38:45,863 [wrapper] Pilot exit status: 0
[2024-05-17 07:38:46] 2024-05-17 14:38:45,876 [wrapper] pandaids: 6207432033
[2024-05-17 07:38:46] 2024-05-17 14:38:45,947 [wrapper] cleanup: SIGTERM to supervisor_pilot  22582 235578
[2024-05-17 07:38:46] 2024-05-17 14:38:45,952 [wrapper] Test setup, not cleaning
[2024-05-17 07:38:46] 2024-05-17 14:38:45,956 [wrapper] ==== wrapper stdout END ====
[2024-05-17 07:38:46] 2024-05-17 14:38:45,960 [wrapper] ==== wrapper stderr END ====
[2024-05-17 07:38:46] 2024-05-17 14:38:45,968 [wrapper] apfmon messages muted
[2024-05-17 07:38:46]  *** Error codes and diagnostics ***
[2024-05-17 07:38:46]     "exeErrorCode": 0,
[2024-05-17 07:38:46]     "exeErrorDiag": "",
[2024-05-17 07:38:46]     "pilotErrorCode": 0,
[2024-05-17 07:38:46]     "pilotErrorDiag": "",
[2024-05-17 07:38:46]  *** Listing of results directory ***
[2024-05-17 07:38:46] total 956456
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc    467845 May 16 08:56 pilot3.tar.gz
[2024-05-17 07:38:46] -rwx------ 1 boinc boinc     32251 May 16 09:00 runpilot2-wrapper.sh
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc      5633 May 16 09:00 queuedata.json
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc       100 May 17 06:00 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 07:38:46] -rwxr-xr-x 1 boinc boinc      7986 May 17 06:00 run_atlas
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc       105 May 17 06:00 job.xml
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc      6624 May 17 06:00 init_data.xml
[2024-05-17 07:38:46] -rw-r--r-- 2 boinc boinc 638279477 May 17 06:00 EVNT.38776170._000052.pool.root.1
[2024-05-17 07:38:46] drwxrwx--x 2 boinc boinc      4096 May 17 06:00 shared
[2024-05-17 07:38:46] -rw-r--r-- 2 boinc boinc    479998 May 17 06:00 input.tar.gz
[2024-05-17 07:38:46] -rw-r--r-- 2 boinc boinc     17537 May 17 06:00 start_atlas.sh
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc         0 May 17 06:00 boinc_lockfile
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc      2613 May 17 06:00 pandaJob.out
[2024-05-17 07:38:46] -rw------- 1 boinc boinc       424 May 17 06:00 setup.sh.local
[2024-05-17 07:38:46] -rw------- 1 boinc boinc   1019370 May 17 06:00 agis_schedconf.cvmfs.json
[2024-05-17 07:38:46] -rw------- 1 boinc boinc         0 May 17 06:00 agis_ddmendpoints.agis.ALL.json
[2024-05-17 07:38:46] -rw------- 1 boinc boinc   1324701 May 17 06:00 cric_ddmendpoints.json
[2024-05-17 07:38:46] drwx------ 4 boinc boinc      4096 May 17 06:00 pilot3
[2024-05-17 07:38:46] -rw------- 1 boinc boinc 335730324 May 17 07:37 HITS.38920987._001450.pool.root.1
[2024-05-17 07:38:46] -rw------- 1 boinc boinc        95 May 17 07:37 pilot_heartbeat.json
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc       530 May 17 07:38 boinc_task_state.xml
[2024-05-17 07:38:46] -rw------- 1 boinc boinc      1047 May 17 07:38 memory_monitor_summary.json
[2024-05-17 07:38:46] -rw------- 1 boinc boinc    362873 May 17 07:38 log.38920987._001450.job.log.tgz.1
[2024-05-17 07:38:46] -rw------- 1 boinc boinc      7757 May 17 07:38 heartbeat.json
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc      8192 May 17 07:38 boinc_mmap_file
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc        27 May 17 07:38 wrapper_checkpoint.txt
[2024-05-17 07:38:46] -rw------- 1 boinc boinc      4210 May 17 07:38 pilotlog.txt
[2024-05-17 07:38:46] -rw------- 1 boinc boinc    571556 May 17 07:38 log.38920987._001450.job.log.1
[2024-05-17 07:38:46] -rw------- 1 boinc boinc       357 May 17 07:38 output.list
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc       620 May 17 07:38 runtime_log
[2024-05-17 07:38:46] -rw------- 1 boinc boinc    952320 May 17 07:38 result.tar.gz
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc     11286 May 17 07:38 runtime_log.err
[2024-05-17 07:38:46] -rw------- 1 boinc boinc       651 May 17 07:38 enVLDmIisR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmIHZKDmRTj2Go.diag
[2024-05-17 07:38:46] -rw-r--r-- 1 boinc boinc     21880 May 17 07:38 stderr.txt
[2024-05-17 07:38:46] HITS file was successfully produced:
[2024-05-17 07:38:46] -rw------- 1 boinc boinc 335730324 May 17 07:37 shared/HITS.pool.root.1
[2024-05-17 07:38:46]  *** Contents of shared directory: ***
[2024-05-17 07:38:46] total 952616
[2024-05-17 07:38:46] -rw-r--r-- 2 boinc boinc 638279477 May 17 06:00 ATLAS.root_0
[2024-05-17 07:38:46] -rw-r--r-- 2 boinc boinc    479998 May 17 06:00 input.tar.gz
[2024-05-17 07:38:46] -rw-r--r-- 2 boinc boinc     17537 May 17 06:00 start_atlas.sh
[2024-05-17 07:38:46] -rw------- 1 boinc boinc 335730324 May 17 07:37 HITS.pool.root.1
[2024-05-17 07:38:46] -rw------- 1 boinc boinc    952320 May 17 07:38 result.tar.gz
07:38:48 (231249): run_atlas exited; CPU time 56994.545215
07:38:48 (231249): called boinc_finish(0)

</stderr_txt>
]]>

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