Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:23:16 (177189): wrapper (7.7.26015): starting
05:23:16 (177189): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 05:23:16] Arguments: --nthreads 12
[2024-05-17 05:23:16] Threads: 12
[2024-05-17 05:23:16] Checking for CVMFS
[2024-05-17 05:23:16] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 05:23:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 05:23:16] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 05:23:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 05:23:17] 2.10.1.0 2812 172216 173532 132841 0 201 40656055 45568000 11054 130560 0 1082887922 99.751 687041225 18243 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-17 05:23:17] CVMFS is ok
[2024-05-17 05:23:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 05:23:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 05:23:17] Further information can be found at the LHC@home message board.
[2024-05-17 05:23:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 05:23:17] Checking for apptainer binary...
[2024-05-17 05:23:17] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 05:23:17] Running /usr/bin/apptainer --version
[2024-05-17 05:23:17] apptainer version 1.1.8-1.el7
[2024-05-17 05:23:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 05:23:18] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0073.triumf.lcg
[2024-05-17 05:23:18] apptainer works
[2024-05-17 05:23:18] Set ATHENA_PROC_NUMBER=12
[2024-05-17 05:23:18] Set ATHENA_CORE_NUMBER=12
[2024-05-17 05:23:18] Starting ATLAS job with PandaID=6207431169
[2024-05-17 05:23:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 07:11:22]  *** The last 200 lines of the pilot log: ***
[2024-05-17 07:11:22]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-17 07:11:22]  direct_access_lan=False
[2024-05-17 07:11:22]  direct_access_wan=False
[2024-05-17 07:11:22]  domain=
[2024-05-17 07:11:22]  filesize=390693
[2024-05-17 07:11:22]  filetype=log
[2024-05-17 07:11:22]  guid=b722e200-f06f-41b2-857a-6bce6c563c49
[2024-05-17 07:11:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 07:11:22]  is_tar=False
[2024-05-17 07:11:22]  lfn=log.38920987._001242.job.log.tgz.1
[2024-05-17 07:11:22]  mtime=0
[2024-05-17 07:11:22]  protocol_id=None
[2024-05-17 07:11:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 07:11:22]  replicas=None
[2024-05-17 07:11:22]  scope=mc23_13p6TeV
[2024-05-17 07:11:22]  status=None
[2024-05-17 07:11:22]  status_code=0
[2024-05-17 07:11:22]  storage_token=
[2024-05-17 07:11:22]  surl=/home/boinc/slots/0/PanDA_Pilot-6207431169/log.38920987._001242.job.log.tgz.1
[2024-05-17 07:11:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/a5/log.38920987._001242.job.log.tgz.1
[2024-05-17 07:11:22]  workdir=None
[2024-05-17 07:11:22] ]
[2024-05-17 07:11:22] 2024-05-17 14:11:02,741 | INFO     | transferring file log.38920987._001242.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6207431169/log.38920987._001242.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 07:11:22] 2024-05-17 14:11:02,741 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6207431169/log.38920987._001242.job.log.tgz.1 /home/boinc/slots/0/log.38920987._001242.job.log.t
[2024-05-17 07:11:22] 2024-05-17 14:11:02,768 | INFO     | adding to output.list: log.38920987._001242.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/37/a5/log.38920987._001242.job.log.tg
[2024-05-17 07:11:22] 2024-05-17 14:11:02,769 | INFO     | summary of transferred files:
[2024-05-17 07:11:22] 2024-05-17 14:11:02,769 | INFO     |  -- lfn=log.38920987._001242.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 07:11:22] 2024-05-17 14:11:02,769 | INFO     | stage-out finished correctly
[2024-05-17 07:11:22] 2024-05-17 14:11:03,435 | WARNING  | process 191904 is no longer using CPU - aborting
[2024-05-17 07:11:22] 2024-05-17 14:11:03,436 | INFO     | will not send any job update
[2024-05-17 07:11:22] 2024-05-17 14:11:03,902 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 07:11:22] 2024-05-17 14:11:03,997 | INFO     | job 6207431169 has state=finished
[2024-05-17 07:11:22] 2024-05-17 14:11:03,997 | INFO     | preparing for final server update for job 6207431169 in state='finished'
[2024-05-17 07:11:22] 2024-05-17 14:11:03,998 | INFO     | this job has now completed (state=finished)
[2024-05-17 07:11:22] 2024-05-17 14:11:03,998 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 07:11:22] 2024-05-17 14:11:03,998 | INFO     | job 6207431169 has finished - writing final server update
[2024-05-17 07:11:22] 2024-05-17 14:11:03,998 | INFO     | total number of processed events: 400 (read)
[2024-05-17 07:11:22] 2024-05-17 14:11:04,004 | INFO     | executing command: lscpu
[2024-05-17 07:11:22] 2024-05-17 14:11:04,071 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 07:11:22] 2024-05-17 14:11:04,072 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 07:11:22] 2024-05-17 14:11:04,136 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 07:11:22] 2024-05-17 14:11:05,939 | INFO     | monitor loop #502: job 0:6207431169 is in state 'finished'
[2024-05-17 07:11:22] 2024-05-17 14:11:05,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,796 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 07:11:22] 2024-05-17 14:11:07,796 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6207431169/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,798 | INFO     | extracted standard info from prmon json
[2024-05-17 07:11:22] 2024-05-17 14:11:07,798 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 07:11:22] 2024-05-17 14:11:07,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 07:11:22] 2024-05-17 14:11:07,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 07:11:22] 2024-05-17 14:11:07,801 | INFO     | fitting pss+swap vs Time
[2024-05-17 07:11:22] 2024-05-17 14:11:07,802 | INFO     | current chi2=5.37151753254545 (change=13.195867993040672 %)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,802 | INFO     | right removable region: 100
[2024-05-17 07:11:22] 2024-05-17 14:11:07,803 | INFO     | current chi2=3.417324843055404 (change=44.77577053598998 %)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,804 | INFO     | current chi2=1.7447308202971117 (change=48.94454286829925 %)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,804 | INFO     | current chi2=0.9228169014797136 (change=47.10835099923515 %)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,805 | INFO     | current chi2=0.8803793180714653 (change=4.59870027740072 %)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,805 | INFO     | left removable region: 40
[2024-05-17 07:11:22] 2024-05-17 14:11:07,805 | INFO     | current memory leak: -67.17 B/s (using 60 data points, chi2=0.05)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,806 | INFO     | ..............................
[2024-05-17 07:11:22] 2024-05-17 14:11:07,806 | INFO     | . Timing measurements:
[2024-05-17 07:11:22] 2024-05-17 14:11:07,806 | INFO     | . get job = 0 s
[2024-05-17 07:11:22] 2024-05-17 14:11:07,806 | INFO     | . initial setup = 1 s
[2024-05-17 07:11:22] 2024-05-17 14:11:07,806 | INFO     | . payload setup = 5 s
[2024-05-17 07:11:22] 2024-05-17 14:11:07,806 | INFO     | . stage-in = 0 s
[2024-05-17 07:11:22] 2024-05-17 14:11:07,806 | INFO     | . payload execution = 6429 s
[2024-05-17 07:11:22] 2024-05-17 14:11:07,807 | INFO     | . stage-out = 0 s
[2024-05-17 07:11:22] 2024-05-17 14:11:07,807 | INFO     | . log creation = 0 s
[2024-05-17 07:11:22] 2024-05-17 14:11:07,807 | INFO     | ..............................
[2024-05-17 07:11:22] 2024-05-17 14:11:07,886 | INFO     | 
[2024-05-17 07:11:22] 2024-05-17 14:11:07,886 | INFO     | job summary report
[2024-05-17 07:11:22] 2024-05-17 14:11:07,886 | INFO     | --------------------------------------------------
[2024-05-17 07:11:22] 2024-05-17 14:11:07,886 | INFO     | PanDA job id: 6207431169
[2024-05-17 07:11:22] 2024-05-17 14:11:07,886 | INFO     | task id: 38920987
[2024-05-17 07:11:22] 2024-05-17 14:11:07,886 | INFO     | errors: (none)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,886 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 07:11:22] 2024-05-17 14:11:07,886 | INFO     | pilot state: finished 
[2024-05-17 07:11:22] 2024-05-17 14:11:07,886 | INFO     | transexitcode: 0
[2024-05-17 07:11:22] 2024-05-17 14:11:07,887 | INFO     | exeerrorcode: 0
[2024-05-17 07:11:22] 2024-05-17 14:11:07,887 | INFO     | exeerrordiag: 
[2024-05-17 07:11:22] 2024-05-17 14:11:07,887 | INFO     | exitcode: 0
[2024-05-17 07:11:22] 2024-05-17 14:11:07,887 | INFO     | exitmsg: OK
[2024-05-17 07:11:22] 2024-05-17 14:11:07,887 | INFO     | cpuconsumptiontime: 64651 s
[2024-05-17 07:11:22] 2024-05-17 14:11:07,887 | INFO     | nevents: 400
[2024-05-17 07:11:22] 2024-05-17 14:11:07,887 | INFO     | neventsw: 0
[2024-05-17 07:11:22] 2024-05-17 14:11:07,887 | INFO     | pid: 191904
[2024-05-17 07:11:22] 2024-05-17 14:11:07,887 | INFO     | pgrp: 191904
[2024-05-17 07:11:22] 2024-05-17 14:11:07,888 | INFO     | corecount: 12
[2024-05-17 07:11:22] 2024-05-17 14:11:07,888 | INFO     | event service: False
[2024-05-17 07:11:22] 2024-05-17 14:11:07,888 | INFO     | sizes: {0: 2392116, 4: 2392322, 11: 2392350, 6437: 2419342, 6439: 2428296, 6440: 2428352, 6444: 2428650}
[2024-05-17 07:11:22] 2024-05-17 14:11:07,888 | INFO     | --------------------------------------------------
[2024-05-17 07:11:22] 2024-05-17 14:11:07,888 | INFO     | 
[2024-05-17 07:11:22] 2024-05-17 14:11:07,888 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 07:11:22] 2024-05-17 14:11:07,917 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,917 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,917 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,918 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,919 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,919 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 07:11:22] 2024-05-17 14:11:07,920 | INFO     | job 6207431169 has completed (purged errors)
[2024-05-17 07:11:22] 2024-05-17 14:11:07,920 | INFO     | overall cleanup function is called
[2024-05-17 07:11:22] 2024-05-17 14:11:08,929 | INFO     | --- collectZombieJob: --- 10, [191904]
[2024-05-17 07:11:22] 2024-05-17 14:11:08,930 | INFO     | zombie collector waiting for pid 191904
[2024-05-17 07:11:22] 2024-05-17 14:11:08,930 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 07:11:22] 2024-05-17 14:11:09,931 | INFO     | collected zombie processes
[2024-05-17 07:11:22] 2024-05-17 14:11:09,931 | INFO     | will now attempt to kill all subprocesses of pid=191904
[2024-05-17 07:11:22] 2024-05-17 14:11:10,136 | INFO     | process IDs to be killed: [191904] (in reverse order)
[2024-05-17 07:11:22] 2024-05-17 14:11:10,244 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 07:11:22] 2024-05-17 14:11:10,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 07:11:22] 2024-05-17 14:11:10,252 | INFO     | did not find any defunct processes belonging to 191904
[2024-05-17 07:11:22] 2024-05-17 14:11:10,259 | INFO     | did not find any defunct processes belonging to 191904
[2024-05-17 07:11:22] 2024-05-17 14:11:10,259 | INFO     | ready for new job
[2024-05-17 07:11:22] 2024-05-17 14:11:10,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 07:11:22] 2024-05-17 14:11:10,261 | INFO     | *************************************
[2024-05-17 07:11:22] 2024-05-17 14:11:10,261 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-05-17 07:11:22] 2024-05-17 14:11:10,261 | INFO     | *************************************
[2024-05-17 07:11:22] 2024-05-17 14:11:10,261 | INFO     | 
[2024-05-17 07:11:22] 2024-05-17 14:11:10,264 | INFO     | architecture information:
[2024-05-17 07:11:22] 2024-05-17 14:11:10,264 | INFO     | executing command: cat /etc/os-release
[2024-05-17 07:11:22] 2024-05-17 14:11:10,287 | INFO     | cat /etc/os-release:
[2024-05-17 07:11:22] NAME="CentOS Linux"
[2024-05-17 07:11:22] VERSION="7 (Core)"
[2024-05-17 07:11:22] ID="centos"
[2024-05-17 07:11:22] ID_LIKE="rhel fedora"
[2024-05-17 07:11:22] VERSION_ID="7"
[2024-05-17 07:11:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 07:11:22] ANSI_COLOR="0;31"
[2024-05-17 07:11:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 07:11:22] HOME_URL="https://www.centos.org/"
[2024-05-17 07:11:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 07:11:22] 
[2024-05-17 07:11:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 07:11:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 07:11:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 07:11:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 07:11:22] 
[2024-05-17 07:11:22] 2024-05-17 14:11:10,288 | INFO     | *************************************
[2024-05-17 07:11:22] 2024-05-17 14:11:10,791 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 07:11:22] 2024-05-17 14:11:10,819 | INFO     | sufficient remaining disk space (2155746426880 B)
[2024-05-17 07:11:22] 2024-05-17 14:11:10,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 07:11:22] 2024-05-17 14:11:10,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 07:11:22] 2024-05-17 14:11:10,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 07:11:22] 2024-05-17 14:11:10,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 07:11:22] 2024-05-17 14:11:10,949 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-17 07:11:22] 2024-05-17 14:11:10,949 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-17 07:11:22] 2024-05-17 14:11:10,949 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 07:11:22] 2024-05-17 14:11:10,949 | INFO     | will abort loop
[2024-05-17 07:11:22] 2024-05-17 14:11:10,994 | INFO     | all payload control threads have been joined
[2024-05-17 07:11:22] 2024-05-17 14:11:11,087 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 07:11:22] 2024-05-17 14:11:11,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 07:11:22] 2024-05-17 14:11:11,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 07:11:22] 2024-05-17 14:11:11,610 | INFO     | all data control threads have been joined
[2024-05-17 07:11:22] 2024-05-17 14:11:11,826 | INFO     | [job] retrieve thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:11,955 | INFO     | [job] job monitor thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,000 | INFO     | [payload] control thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,228 | INFO     | all job control threads have been joined
[2024-05-17 07:11:22] 2024-05-17 14:11:12,367 | INFO     | [data] copytool_in thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,409 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,438 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,616 | INFO     | [data] control thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,670 | INFO     | [payload] failed_post thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,687 | INFO     | [job] validate thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,842 | INFO     | [data] copytool_out thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,879 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:12,897 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 07:11:22] 2024-05-17 14:11:13,027 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:13,234 | INFO     | [job] control thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:13,274 | INFO     | [payload] validate_post thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:13,902 | INFO     | [job] queue monitor thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:14,827 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 07:11:22] 2024-05-17 14:11:16,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943378392896)>', '<ExcThread(monitor, started 139942961334016)>']
[2024-05-17 07:11:22] 2024-05-17 14:11:16,114 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 07:11:22] 2024-05-17 14:11:16,114 | INFO     | [monitor] control thread has ended
[2024-05-17 07:11:22] 2024-05-17 14:11:21,052 | INFO     | all workflow threads have been joined
[2024-05-17 07:11:22] 2024-05-17 14:11:21,052 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 07:11:22] 2024-05-17 14:11:21,052 | INFO     | traces error code: 0
[2024-05-17 07:11:22] 2024-05-17 14:11:21,053 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 07:11:22] 2024-05-17 14:11:21,144 [wrapper] ==== pilot stdout END ====
[2024-05-17 07:11:22] 2024-05-17 14:11:21,148 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 07:11:22] 2024-05-17 14:11:21,151 [wrapper] pilotpid: 181421
[2024-05-17 07:11:22] 2024-05-17 14:11:21,155 [wrapper] Pilot exit status: 0
[2024-05-17 07:11:22] 2024-05-17 14:11:21,166 [wrapper] pandaids: 6207431169
[2024-05-17 07:11:22] 2024-05-17 14:11:21,244 [wrapper] cleanup: SIGTERM to supervisor_pilot  18928 181422
[2024-05-17 07:11:22] 2024-05-17 14:11:21,247 [wrapper] Test setup, not cleaning
[2024-05-17 07:11:22] 2024-05-17 14:11:21,251 [wrapper] ==== wrapper stdout END ====
[2024-05-17 07:11:22] 2024-05-17 14:11:21,255 [wrapper] ==== wrapper stderr END ====
[2024-05-17 07:11:22] 2024-05-17 14:11:21,263 [wrapper] apfmon messages muted
[2024-05-17 07:11:22]  *** Error codes and diagnostics ***
[2024-05-17 07:11:22]     "exeErrorCode": 0,
[2024-05-17 07:11:22]     "exeErrorDiag": "",
[2024-05-17 07:11:22]     "pilotErrorCode": 0,
[2024-05-17 07:11:22]     "pilotErrorDiag": "",
[2024-05-17 07:11:22]  *** Listing of results directory ***
[2024-05-17 07:11:22] total 968336
[2024-05-17 07:11:22] -rwx------ 1 boinc boinc     32251 May 16 08:40 runpilot2-wrapper.sh
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc      5633 May 16 08:40 queuedata.json
[2024-05-17 07:11:22] -rw------- 1 boinc boinc    468593 May 16 08:40 pilot3.tar.gz
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc       100 May 17 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 07:11:22] -rwxr-xr-x 1 boinc boinc      7986 May 17 05:23 run_atlas
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc       105 May 17 05:23 job.xml
[2024-05-17 07:11:22] -rw-r--r-- 2 boinc boinc 643529316 May 17 05:23 EVNT.38776170._000033.pool.root.1
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc      6626 May 17 05:23 init_data.xml
[2024-05-17 07:11:22] drwxrwx--x 2 boinc boinc      4096 May 17 05:23 shared
[2024-05-17 07:11:22] -rw-r--r-- 2 boinc boinc    481382 May 17 05:23 input.tar.gz
[2024-05-17 07:11:22] -rw-r--r-- 2 boinc boinc     17537 May 17 05:23 start_atlas.sh
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc         0 May 17 05:23 boinc_lockfile
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc      2613 May 17 05:23 pandaJob.out
[2024-05-17 07:11:22] -rw------- 1 boinc boinc       424 May 17 05:23 setup.sh.local
[2024-05-17 07:11:22] -rw------- 1 boinc boinc   1019370 May 17 05:23 agis_schedconf.cvmfs.json
[2024-05-17 07:11:22] -rw------- 1 boinc boinc         0 May 17 05:23 agis_ddmendpoints.agis.ALL.json
[2024-05-17 07:11:22] -rw------- 1 boinc boinc   1324701 May 17 05:23 cric_ddmendpoints.json
[2024-05-17 07:11:22] drwx------ 6 boinc boinc      4096 May 17 05:23 pilot3
[2024-05-17 07:11:22] -rw------- 1 boinc boinc 342518066 May 17 07:10 HITS.38920987._001242.pool.root.1
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc       530 May 17 07:10 boinc_task_state.xml
[2024-05-17 07:11:22] -rw------- 1 boinc boinc        95 May 17 07:10 pilot_heartbeat.json
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc      8192 May 17 07:10 boinc_mmap_file
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc        27 May 17 07:10 wrapper_checkpoint.txt
[2024-05-17 07:11:22] -rw------- 1 boinc boinc      1056 May 17 07:10 memory_monitor_summary.json
[2024-05-17 07:11:22] -rw------- 1 boinc boinc    390693 May 17 07:11 log.38920987._001242.job.log.tgz.1
[2024-05-17 07:11:22] -rw------- 1 boinc boinc      7741 May 17 07:11 heartbeat.json
[2024-05-17 07:11:22] -rw------- 1 boinc boinc      4396 May 17 07:11 pilotlog.txt
[2024-05-17 07:11:22] -rw------- 1 boinc boinc    607800 May 17 07:11 log.38920987._001242.job.log.1
[2024-05-17 07:11:22] -rw------- 1 boinc boinc       357 May 17 07:11 output.list
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc       620 May 17 07:11 runtime_log
[2024-05-17 07:11:22] -rw------- 1 boinc boinc   1013760 May 17 07:11 result.tar.gz
[2024-05-17 07:11:22] -rw------- 1 boinc boinc       652 May 17 07:11 SiFKDmYOsR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmAkPKDmZpNRGm.diag
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc     11286 May 17 07:11 runtime_log.err
[2024-05-17 07:11:22] -rw-r--r-- 1 boinc boinc     21346 May 17 07:11 stderr.txt
[2024-05-17 07:11:22] HITS file was successfully produced:
[2024-05-17 07:11:22] -rw------- 1 boinc boinc 342518066 May 17 07:10 shared/HITS.pool.root.1
[2024-05-17 07:11:22]  *** Contents of shared directory: ***
[2024-05-17 07:11:22] total 964432
[2024-05-17 07:11:22] -rw-r--r-- 2 boinc boinc 643529316 May 17 05:23 ATLAS.root_0
[2024-05-17 07:11:22] -rw-r--r-- 2 boinc boinc    481382 May 17 05:23 input.tar.gz
[2024-05-17 07:11:22] -rw-r--r-- 2 boinc boinc     17537 May 17 05:23 start_atlas.sh
[2024-05-17 07:11:22] -rw------- 1 boinc boinc 342518066 May 17 07:10 HITS.pool.root.1
[2024-05-17 07:11:22] -rw------- 1 boinc boinc   1013760 May 17 07:11 result.tar.gz
07:11:23 (177189): run_atlas exited; CPU time 64443.703328
07:11:23 (177189): called boinc_finish(0)

</stderr_txt>
]]>

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