Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
07:09:57 (3326781): wrapper (7.7.26015): starting
07:09:57 (3326781): wrapper: running run_atlas (--nthreads 4)
[2024-05-21 07:09:57] Arguments: --nthreads 4
[2024-05-21 07:09:57] Threads: 4
[2024-05-21 07:09:57] Checking for CVMFS
[2024-05-21 07:09:57] No cvmfs_config command found, will try listing directly
[2024-05-21 07:09:57] CVMFS is ok
[2024-05-21 07:09:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-21 07:09:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-21 07:09:57] Further information can be found at the LHC@home message board.
[2024-05-21 07:09:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-21 07:09:57] Checking for apptainer binary...
[2024-05-21 07:09:57] which: no apptainer in ((null))
[2024-05-21 07:09:57] apptainer is not installed, using version from CVMFS
[2024-05-21 07:09:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-21 07:09:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-21 07:09:58] apptainer works
[2024-05-21 07:09:58] Set ATHENA_PROC_NUMBER=4
[2024-05-21 07:09:58] Set ATHENA_CORE_NUMBER=4
[2024-05-21 07:09:58] Starting ATLAS job with PandaID=6207431163
[2024-05-21 07:09:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
06:24:53 (3422035): wrapper (7.7.26015): starting
06:24:53 (3422035): wrapper: running run_atlas (--nthreads 4)
[2024-05-22 06:24:53] Arguments: --nthreads 4
[2024-05-22 06:24:53] Threads: 4
[2024-05-22 06:24:53] This job has been restarted, cleaning up previous attempt
[2024-05-22 06:24:53] Checking for CVMFS
[2024-05-22 06:24:53] No cvmfs_config command found, will try listing directly
[2024-05-22 06:24:53] CVMFS is ok
[2024-05-22 06:24:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-22 06:24:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-22 06:24:53] Further information can be found at the LHC@home message board.
[2024-05-22 06:24:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-22 06:24:53] Checking for apptainer binary...
[2024-05-22 06:24:53] which: no apptainer in ((null))
[2024-05-22 06:24:53] apptainer is not installed, using version from CVMFS
[2024-05-22 06:24:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-22 06:24:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-22 06:24:54] apptainer works
[2024-05-22 06:24:54] Set ATHENA_PROC_NUMBER=4
[2024-05-22 06:24:54] Set ATHENA_CORE_NUMBER=4
[2024-05-22 06:24:54] Starting ATLAS job with PandaID=6207431163
[2024-05-22 06:24:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-22 06:31:46] Job failed
[2024-05-22 06:31:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-22 06:31:46] ++ pwd
[2024-05-22 06:31:46] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot84/slots/1/
[2024-05-22 06:31:46] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot84/slots/1/
[2024-05-22 06:31:46] + mv ATLAS.root_0 EVNT.38776170._000033.pool.root.1
[2024-05-22 06:31:46] mv: 'ATLAS.root_0' and 'EVNT.38776170._000033.pool.root.1' are the same file
[2024-05-22 06:31:46] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-22 06:31:46] + umask 077
[2024-05-22 06:31:46] ++ date +%s
[2024-05-22 06:31:46] + ACCOUNTING_STARTTIME=1716351894
[2024-05-22 06:31:46] + echo 'Detecting resource accounting method available for the job.'
[2024-05-22 06:31:46] Detecting resource accounting method available for the job.
[2024-05-22 06:31:46] + JOB_ACCOUNTING=
[2024-05-22 06:31:46] + command -v arc-job-cgroup
[2024-05-22 06:31:46] + '[' -z '' ']'
[2024-05-22 06:31:46] + GNU_TIME=/usr/bin/time
[2024-05-22 06:31:46] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-22 06:31:46] Looking for /usr/bin/time tool for accounting measurements
[2024-05-22 06:31:46] + '[' '!' -z /usr/bin/time ']'
[2024-05-22 06:31:46] + /usr/bin/time --version
[2024-05-22 06:31:46] + echo 'GNU time found and will be used for job accounting.'
[2024-05-22 06:31:46] GNU time found and will be used for job accounting.
[2024-05-22 06:31:46] + JOB_ACCOUNTING=gnutime
[2024-05-22 06:31:46] + '[' -z gnutime ']'
[2024-05-22 06:31:46] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-22 06:31:46] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-22 06:31:46] + export GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-16/BOINC_MCORE/6207431163.out
[2024-05-22 06:31:46] + GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-16/BOINC_MCORE/6207431163.out
[2024-05-22 06:31:46] + export PILOT_NOKILL=YES
[2024-05-22 06:31:46] + PILOT_NOKILL=YES
[2024-05-22 06:31:46] + export GRID_GLOBAL_JOBID=7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn
[2024-05-22 06:31:46] + GRID_GLOBAL_JOBID=7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn
[2024-05-22 06:31:46] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn
[2024-05-22 06:31:46] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn
[2024-05-22 06:31:46] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-22 06:31:46] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-22 06:31:46] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-22 06:31:46] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-22 06:31:46] ++ pwd
[2024-05-22 06:31:46] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot84/slots/1
[2024-05-22 06:31:46] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-22 06:31:46] ++ pwd
[2024-05-22 06:31:46] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot84/slots/1/log.38920987._001236.job.log.1
[2024-05-22 06:31:46] ++ pwd
[2024-05-22 06:31:46] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot84/slots/1/log.38920987._001236.job.log.1
[2024-05-22 06:31:46] ++ pwd
[2024-05-22 06:31:46] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot84/slots/1.diag
[2024-05-22 06:31:46] + '[' '!' -z '' ']'
[2024-05-22 06:31:46] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-22 06:31:46] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-22 06:31:46] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-22 06:31:46] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-22 06:31:46] + '[' '!' -z '' ']'
[2024-05-22 06:31:46] + '[' -z yes ']'
[2024-05-22 06:31:46] ++ pwd
[2024-05-22 06:31:46] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot84/slots/1/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag
[2024-05-22 06:31:46] + runtimeenvironments=
[2024-05-22 06:31:46] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-22 06:31:46] + RTE_function_0 1
[2024-05-22 06:31:46] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-22 06:31:46] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-22 06:31:46] + export BOINC_APP=ATLAS
[2024-05-22 06:31:46] + BOINC_APP=ATLAS
[2024-05-22 06:31:46] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-22 06:31:46] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-22 06:31:46] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-22 06:31:46] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-22 06:31:46] + '[' -z 1 ']'
[2024-05-22 06:31:46] + '[' 1 == 1 ']'
[2024-05-22 06:31:46] + shift
[2024-05-22 06:31:46] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-22 06:31:46] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-22 06:31:46] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-22 06:31:46] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot84/slots/1/
[2024-05-22 06:31:46] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot84/slots/1/
[2024-05-22 06:31:46] + '[' -e /scratch/boinc/var/slot84/slots/1/init_data.xml ']'
[2024-05-22 06:31:46] + grep '<use_http_proxy/>' /scratch/boinc/var/slot84/slots/1/init_data.xml
[2024-05-22 06:31:46] + '[' -e /scratch/boinc/var/slot84/slots/1/init_data.xml ']'
[2024-05-22 06:31:46] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot84/slots/1/init_data.xml
[2024-05-22 06:31:46] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-22 06:31:46] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-22 06:31:46] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-22 06:31:46] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-22 06:31:46] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-22 06:31:46] + '[' 0 -ne 0 ']'
[2024-05-22 06:31:46] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-22 06:31:46] + '[' -f /etc/os-release ']'
[2024-05-22 06:31:46] +++ cat /etc/os-release
[2024-05-22 06:31:46] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-22 06:31:46] +++ NAME='CentOS Linux'
[2024-05-22 06:31:46] +++ VERSION='7 (Core)'
[2024-05-22 06:31:46] +++ ID=centos
[2024-05-22 06:31:46] +++ ID_LIKE='rhel fedora'
[2024-05-22 06:31:46] +++ VERSION_ID=7
[2024-05-22 06:31:46] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-22 06:31:46] +++ ANSI_COLOR='0;31'
[2024-05-22 06:31:46] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-22 06:31:46] +++ HOME_URL=https://www.centos.org/
[2024-05-22 06:31:46] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-22 06:31:46] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-22 06:31:46] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-22 06:31:46] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-22 06:31:46] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-22 06:31:46] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-22 06:31:46] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-22 06:31:46] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-22 06:31:46] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-22 06:31:46] + HOME=/scratch/boinc/var/slot84/slots/1
[2024-05-22 06:31:46] + export HOME
[2024-05-22 06:31:46] + cd /scratch/boinc/var/slot84/slots/1
[2024-05-22 06:31:46] + '[' '!' -z '' ']'
[2024-05-22 06:31:46] + '[' -z '' ']'
[2024-05-22 06:31:46] ++ /bin/hostname -f
[2024-05-22 06:31:46] + nodename=skurut15.grid.cesnet.cz
[2024-05-22 06:31:46] + echo nodename=skurut15.grid.cesnet.cz
[2024-05-22 06:31:46] + echo Processors=1
[2024-05-22 06:31:46] + echo Benchmark=HEPSPEC:1.0
[2024-05-22 06:31:46] + executable=./runpilot2-wrapper.sh
[2024-05-22 06:31:46] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-22 06:31:46] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-22 06:31:46] ++ tr -d '\0'
[2024-05-22 06:31:46] ++ head -n 1
[2024-05-22 06:31:46] + line1='#!/bin/bash'
[2024-05-22 06:31:46] ++ echo '#!/bin/bash'
[2024-05-22 06:31:46] ++ sed -n 's/^#! *//p'
[2024-05-22 06:31:46] + shebang=/bin/bash
[2024-05-22 06:31:46] ++ echo /bin/bash
[2024-05-22 06:31:46] ++ awk '{print $1}'
[2024-05-22 06:31:46] + interpreter=/bin/bash
[2024-05-22 06:31:46] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-22 06:31:46] + '[' x/bin/bash = x ']'
[2024-05-22 06:31:46] + type /bin/bash
[2024-05-22 06:31:46] + '[' xgnutime = xgnutime ']'
[2024-05-22 06:31:46] + /usr/bin/time -o /scratch/boinc/var/slot84/slots/1/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-22 06:31:46] + RESULT=2
[2024-05-22 06:31:46] + sed -i -e /nodename=/d /scratch/boinc/var/slot84/slots/1/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag
[2024-05-22 06:31:46] ++ grep domain_name init_data.xml
[2024-05-22 06:31:46] ++ awk -F '<' '{print $1}'
[2024-05-22 06:31:46] ++ awk -F '>' '{print $2}'
[2024-05-22 06:31:46] ++ sed -e 's# #_#g'
[2024-05-22 06:31:46] + hostname=skurut15.grid.cesnet.cz
[2024-05-22 06:31:46] ++ awk -F '<' '{print $1}'
[2024-05-22 06:31:46] ++ awk -F '>' '{print $2}'
[2024-05-22 06:31:46] ++ sed -e 's# #_#g'
[2024-05-22 06:31:46] ++ grep user_name init_data.xml
[2024-05-22 06:31:46] + username=praguelcg2
[2024-05-22 06:31:46] + nodename=praguelcg2@skurut15.grid.cesnet.cz
[2024-05-22 06:31:46] + echo nodename=praguelcg2@skurut15.grid.cesnet.cz
[2024-05-22 06:31:46] + '[' -n 4 ']'
[2024-05-22 06:31:46] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot84/slots/1/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag
[2024-05-22 06:31:46] + echo exitcode=2
[2024-05-22 06:31:46] + runtimeenvironments=
[2024-05-22 06:31:46] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-22 06:31:46] + RTE_function_0 2
[2024-05-22 06:31:46] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-22 06:31:46] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-22 06:31:46] + export BOINC_APP=ATLAS
[2024-05-22 06:31:46] + BOINC_APP=ATLAS
[2024-05-22 06:31:46] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-22 06:31:46] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-22 06:31:46] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-22 06:31:46] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-22 06:31:46] + '[' -z 2 ']'
[2024-05-22 06:31:46] + '[' 2 == 1 ']'
[2024-05-22 06:31:46] + '[' 0 -ne 0 ']'
[2024-05-22 06:31:46] + echo 'zip all output files'
[2024-05-22 06:31:46] + flist='*.diag '
[2024-05-22 06:31:46] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 06:31:46] + '[' -e ./heartbeat.json ']'
[2024-05-22 06:31:46] + flist='*.diag  ./heartbeat.json'
[2024-05-22 06:31:46] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 06:31:46] + '[' -e ./output.list ']'
[2024-05-22 06:31:46] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 06:31:46] + '[' -e ./log.38920987._001236.job.log.1 ']'
[2024-05-22 06:31:46] + flist='*.diag  ./heartbeat.json ./log.38920987._001236.job.log.1'
[2024-05-22 06:31:46] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 06:31:46] + '[' -e ./log.38920987._001236.job.log.1 ']'
[2024-05-22 06:31:46] + flist='*.diag  ./heartbeat.json ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1'
[2024-05-22 06:31:46] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 06:31:46] + '[' -e ./gmlog/ ']'
[2024-05-22 06:31:46] + '[' -f output.list ']'
[2024-05-22 06:31:46] + tar cvf result.tar.gz 7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag ./heartbeat.json ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1
[2024-05-22 06:31:46] + '[' xgnutime = xcgroup ']'
[2024-05-22 06:31:46] + '[' -n '' ']'
[2024-05-22 06:31:46] + '[' -n '' ']'
[2024-05-22 06:31:46] ++ date +%s
[2024-05-22 06:31:46] + ACCOUNTING_ENDTIME=1716352085
[2024-05-22 06:31:46] ++ date -d '1970-01-01 UTC 1716351894 seconds' +%Y%m%d%H%M%SZ
[2024-05-22 06:31:46] + echo LRMSStartTime=20240522062454Z
[2024-05-22 06:31:46] ++ date -d '1970-01-01 UTC 1716352085 seconds' +%Y%m%d%H%M%SZ
[2024-05-22 06:31:46] + echo LRMSEndTime=20240522062805Z
[2024-05-22 06:31:46] + echo walltime=191
[2024-05-22 06:31:46] + echo exitcode=2
[2024-05-22 06:31:46] + exit 2
[2024-05-22 06:31:46] ./runtime_log.err
[2024-05-22 06:31:46] ./pilotlog.txt
[2024-05-22 06:31:46] ./runtime_log
[2024-05-22 06:31:46] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-22 06:31:46] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-22 06:31:46] ./pilot3/pilot/util/loggingsupport.py
[2024-05-22 06:31:46] ./pilot3/pilot/util/realtimelogger.py
[2024-05-22 06:31:46] ./PanDA_Pilot-6207431163/PoolFileCatalog.xml
[2024-05-22 06:31:46] ./PanDA_Pilot-6207431163/pilotlog.txt
[2024-05-22 06:31:46] ./PanDA_Pilot-6207431163/prmon.log
[2024-05-22 06:31:46] ./PanDA_Pilot-6207431163/log.EVNTtoHITS
[2024-05-22 06:31:46] ./log.38920987._001236.job.log.1
11:41:51 (304540): wrapper (7.7.26015): starting
11:41:51 (304540): wrapper: running run_atlas (--nthreads 4)
[2024-05-22 11:41:51] Arguments: --nthreads 4
[2024-05-22 11:41:51] Threads: 4
[2024-05-22 11:41:51] This job has been restarted, cleaning up previous attempt
[2024-05-22 11:41:51] Checking for CVMFS
[2024-05-22 11:41:51] No cvmfs_config command found, will try listing directly
[2024-05-22 11:41:51] CVMFS is ok
[2024-05-22 11:41:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-22 11:41:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-22 11:41:51] Further information can be found at the LHC@home message board.
[2024-05-22 11:41:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-22 11:41:51] Checking for apptainer binary...
[2024-05-22 11:41:51] which: no apptainer in ((null))
[2024-05-22 11:41:51] apptainer is not installed, using version from CVMFS
[2024-05-22 11:41:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-22 11:41:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-22 11:41:52] apptainer works
[2024-05-22 11:41:52] Set ATHENA_PROC_NUMBER=4
[2024-05-22 11:41:52] Set ATHENA_CORE_NUMBER=4
[2024-05-22 11:41:52] Starting ATLAS job with PandaID=6207431163
[2024-05-22 11:41:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-22 11:51:14] Job failed
[2024-05-22 11:51:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-22 11:51:14] ++ pwd
[2024-05-22 11:51:14] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot84/slots/1/
[2024-05-22 11:51:14] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot84/slots/1/
[2024-05-22 11:51:14] + mv ATLAS.root_0 EVNT.38776170._000033.pool.root.1
[2024-05-22 11:51:14] mv: 'ATLAS.root_0' and 'EVNT.38776170._000033.pool.root.1' are the same file
[2024-05-22 11:51:14] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-22 11:51:14] + umask 077
[2024-05-22 11:51:14] ++ date +%s
[2024-05-22 11:51:14] + ACCOUNTING_STARTTIME=1716370912
[2024-05-22 11:51:14] + echo 'Detecting resource accounting method available for the job.'
[2024-05-22 11:51:14] Detecting resource accounting method available for the job.
[2024-05-22 11:51:14] + JOB_ACCOUNTING=
[2024-05-22 11:51:14] + command -v arc-job-cgroup
[2024-05-22 11:51:14] + '[' -z '' ']'
[2024-05-22 11:51:14] + GNU_TIME=/usr/bin/time
[2024-05-22 11:51:14] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-22 11:51:14] Looking for /usr/bin/time tool for accounting measurements
[2024-05-22 11:51:14] + '[' '!' -z /usr/bin/time ']'
[2024-05-22 11:51:14] + /usr/bin/time --version
[2024-05-22 11:51:14] + echo 'GNU time found and will be used for job accounting.'
[2024-05-22 11:51:14] GNU time found and will be used for job accounting.
[2024-05-22 11:51:14] + JOB_ACCOUNTING=gnutime
[2024-05-22 11:51:14] + '[' -z gnutime ']'
[2024-05-22 11:51:14] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-22 11:51:14] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-22 11:51:14] + export GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-16/BOINC_MCORE/6207431163.out
[2024-05-22 11:51:14] + GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-16/BOINC_MCORE/6207431163.out
[2024-05-22 11:51:14] + export PILOT_NOKILL=YES
[2024-05-22 11:51:14] + PILOT_NOKILL=YES
[2024-05-22 11:51:14] + export GRID_GLOBAL_JOBID=7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn
[2024-05-22 11:51:14] + GRID_GLOBAL_JOBID=7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn
[2024-05-22 11:51:14] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn
[2024-05-22 11:51:14] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn
[2024-05-22 11:51:14] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-22 11:51:14] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-22 11:51:14] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-22 11:51:14] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-22 11:51:14] ++ pwd
[2024-05-22 11:51:14] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot84/slots/1
[2024-05-22 11:51:14] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-22 11:51:14] ++ pwd
[2024-05-22 11:51:14] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot84/slots/1/log.38920987._001236.job.log.1
[2024-05-22 11:51:14] ++ pwd
[2024-05-22 11:51:14] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot84/slots/1/log.38920987._001236.job.log.1
[2024-05-22 11:51:14] ++ pwd
[2024-05-22 11:51:14] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot84/slots/1.diag
[2024-05-22 11:51:14] + '[' '!' -z '' ']'
[2024-05-22 11:51:14] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-22 11:51:14] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-22 11:51:14] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-22 11:51:14] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-22 11:51:14] + '[' '!' -z '' ']'
[2024-05-22 11:51:14] + '[' -z yes ']'
[2024-05-22 11:51:14] ++ pwd
[2024-05-22 11:51:14] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot84/slots/1/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag
[2024-05-22 11:51:14] + runtimeenvironments=
[2024-05-22 11:51:14] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-22 11:51:14] + RTE_function_0 1
[2024-05-22 11:51:14] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-22 11:51:14] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-22 11:51:14] + export BOINC_APP=ATLAS
[2024-05-22 11:51:14] + BOINC_APP=ATLAS
[2024-05-22 11:51:14] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-22 11:51:14] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-22 11:51:14] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-22 11:51:14] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-22 11:51:14] + '[' -z 1 ']'
[2024-05-22 11:51:14] + '[' 1 == 1 ']'
[2024-05-22 11:51:14] + shift
[2024-05-22 11:51:14] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-22 11:51:14] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-22 11:51:14] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-22 11:51:14] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot84/slots/1/
[2024-05-22 11:51:14] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot84/slots/1/
[2024-05-22 11:51:14] + '[' -e /scratch/boinc/var/slot84/slots/1/init_data.xml ']'
[2024-05-22 11:51:14] + grep '<use_http_proxy/>' /scratch/boinc/var/slot84/slots/1/init_data.xml
[2024-05-22 11:51:14] + '[' -e /scratch/boinc/var/slot84/slots/1/init_data.xml ']'
[2024-05-22 11:51:14] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot84/slots/1/init_data.xml
[2024-05-22 11:51:14] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-22 11:51:14] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-22 11:51:14] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-22 11:51:14] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-22 11:51:14] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-22 11:51:14] + '[' 0 -ne 0 ']'
[2024-05-22 11:51:14] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-22 11:51:14] + '[' -f /etc/os-release ']'
[2024-05-22 11:51:14] +++ cat /etc/os-release
[2024-05-22 11:51:14] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-22 11:51:14] +++ NAME='CentOS Linux'
[2024-05-22 11:51:14] +++ VERSION='7 (Core)'
[2024-05-22 11:51:14] +++ ID=centos
[2024-05-22 11:51:14] +++ ID_LIKE='rhel fedora'
[2024-05-22 11:51:14] +++ VERSION_ID=7
[2024-05-22 11:51:14] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-22 11:51:14] +++ ANSI_COLOR='0;31'
[2024-05-22 11:51:14] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-22 11:51:14] +++ HOME_URL=https://www.centos.org/
[2024-05-22 11:51:14] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-22 11:51:14] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-22 11:51:14] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-22 11:51:14] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-22 11:51:14] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-22 11:51:14] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-22 11:51:14] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-22 11:51:14] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-22 11:51:14] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-22 11:51:14] + HOME=/scratch/boinc/var/slot84/slots/1
[2024-05-22 11:51:14] + export HOME
[2024-05-22 11:51:14] + cd /scratch/boinc/var/slot84/slots/1
[2024-05-22 11:51:14] + '[' '!' -z '' ']'
[2024-05-22 11:51:14] + '[' -z '' ']'
[2024-05-22 11:51:14] ++ /bin/hostname -f
[2024-05-22 11:51:14] + nodename=skurut15.grid.cesnet.cz
[2024-05-22 11:51:14] + echo nodename=skurut15.grid.cesnet.cz
[2024-05-22 11:51:14] + echo Processors=1
[2024-05-22 11:51:14] + echo Benchmark=HEPSPEC:1.0
[2024-05-22 11:51:14] + executable=./runpilot2-wrapper.sh
[2024-05-22 11:51:14] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-22 11:51:14] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-22 11:51:14] ++ head -n 1
[2024-05-22 11:51:14] ++ tr -d '\0'
[2024-05-22 11:51:14] + line1='#!/bin/bash'
[2024-05-22 11:51:14] ++ echo '#!/bin/bash'
[2024-05-22 11:51:14] ++ sed -n 's/^#! *//p'
[2024-05-22 11:51:14] + shebang=/bin/bash
[2024-05-22 11:51:14] ++ echo /bin/bash
[2024-05-22 11:51:14] ++ awk '{print $1}'
[2024-05-22 11:51:14] + interpreter=/bin/bash
[2024-05-22 11:51:14] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-22 11:51:14] + '[' x/bin/bash = x ']'
[2024-05-22 11:51:14] + type /bin/bash
[2024-05-22 11:51:14] + '[' xgnutime = xgnutime ']'
[2024-05-22 11:51:14] + /usr/bin/time -o /scratch/boinc/var/slot84/slots/1/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-22 11:51:14] + RESULT=2
[2024-05-22 11:51:14] + sed -i -e /nodename=/d /scratch/boinc/var/slot84/slots/1/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag
[2024-05-22 11:51:14] ++ grep domain_name init_data.xml
[2024-05-22 11:51:14] ++ awk -F '>' '{print $2}'
[2024-05-22 11:51:14] ++ sed -e 's# #_#g'
[2024-05-22 11:51:14] ++ awk -F '<' '{print $1}'
[2024-05-22 11:51:14] + hostname=skurut15.grid.cesnet.cz
[2024-05-22 11:51:14] ++ grep user_name init_data.xml
[2024-05-22 11:51:14] ++ awk -F '>' '{print $2}'
[2024-05-22 11:51:14] ++ awk -F '<' '{print $1}'
[2024-05-22 11:51:14] ++ sed -e 's# #_#g'
[2024-05-22 11:51:14] + username=praguelcg2
[2024-05-22 11:51:14] + nodename=praguelcg2@skurut15.grid.cesnet.cz
[2024-05-22 11:51:14] + echo nodename=praguelcg2@skurut15.grid.cesnet.cz
[2024-05-22 11:51:14] + '[' -n 4 ']'
[2024-05-22 11:51:14] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot84/slots/1/7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag
[2024-05-22 11:51:14] + echo exitcode=2
[2024-05-22 11:51:14] + runtimeenvironments=
[2024-05-22 11:51:14] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-22 11:51:14] + RTE_function_0 2
[2024-05-22 11:51:14] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-22 11:51:14] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-22 11:51:14] + export BOINC_APP=ATLAS
[2024-05-22 11:51:14] + BOINC_APP=ATLAS
[2024-05-22 11:51:14] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-22 11:51:14] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-22 11:51:14] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-22 11:51:14] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-22 11:51:14] + '[' -z 2 ']'
[2024-05-22 11:51:14] + '[' 2 == 1 ']'
[2024-05-22 11:51:14] + '[' 0 -ne 0 ']'
[2024-05-22 11:51:14] + echo 'zip all output files'
[2024-05-22 11:51:14] + flist='*.diag '
[2024-05-22 11:51:14] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 11:51:14] + '[' -e ./heartbeat.json ']'
[2024-05-22 11:51:14] + flist='*.diag  ./heartbeat.json'
[2024-05-22 11:51:14] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 11:51:14] + '[' -e ./output.list ']'
[2024-05-22 11:51:14] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 11:51:14] + '[' -e ./log.38920987._001236.job.log.1 ']'
[2024-05-22 11:51:14] + flist='*.diag  ./heartbeat.json ./log.38920987._001236.job.log.1'
[2024-05-22 11:51:14] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 11:51:14] + '[' -e ./log.38920987._001236.job.log.1 ']'
[2024-05-22 11:51:14] + flist='*.diag  ./heartbeat.json ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1'
[2024-05-22 11:51:14] + for f in ./heartbeat.json ./output.list ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1 ./gmlog/
[2024-05-22 11:51:14] + '[' -e ./gmlog/ ']'
[2024-05-22 11:51:14] + '[' -f output.list ']'
[2024-05-22 11:51:14] + tar cvf result.tar.gz 7oPKDmANsR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIQKKDmpWrVsn.diag ./heartbeat.json ./log.38920987._001236.job.log.1 ./log.38920987._001236.job.log.1
[2024-05-22 11:51:14] + '[' xgnutime = xcgroup ']'
[2024-05-22 11:51:14] + '[' -n '' ']'
[2024-05-22 11:51:14] + '[' -n '' ']'
[2024-05-22 11:51:14] ++ date +%s
[2024-05-22 11:51:14] + ACCOUNTING_ENDTIME=1716371101
[2024-05-22 11:51:14] ++ date -d '1970-01-01 UTC 1716370912 seconds' +%Y%m%d%H%M%SZ
[2024-05-22 11:51:14] + echo LRMSStartTime=20240522114152Z
[2024-05-22 11:51:14] ++ date -d '1970-01-01 UTC 1716371101 seconds' +%Y%m%d%H%M%SZ
[2024-05-22 11:51:14] + echo LRMSEndTime=20240522114501Z
[2024-05-22 11:51:14] + echo walltime=189
[2024-05-22 11:51:14] + echo exitcode=2
[2024-05-22 11:51:14] + exit 2
[2024-05-22 11:51:14] ./runtime_log.err
[2024-05-22 11:51:14] ./pilotlog.txt
[2024-05-22 11:51:14] ./runtime_log
[2024-05-22 11:51:14] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-22 11:51:14] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-22 11:51:14] ./pilot3/pilot/util/loggingsupport.py
[2024-05-22 11:51:14] ./pilot3/pilot/util/realtimelogger.py
[2024-05-22 11:51:14] ./PanDA_Pilot-6207431163/PoolFileCatalog.xml
[2024-05-22 11:51:14] ./PanDA_Pilot-6207431163/pilotlog.txt
[2024-05-22 11:51:14] ./PanDA_Pilot-6207431163/prmon.log
[2024-05-22 11:51:14] ./PanDA_Pilot-6207431163/log.EVNTtoHITS
[2024-05-22 11:51:14] ./log.38920987._001236.job.log.1
12:01:48 (304540): run_atlas exited; CPU time 14.113856
12:01:48 (304540): app exit status: 0x1
12:01:48 (304540): called boinc_finish(195)

</stderr_txt>
]]>

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