Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:20:42 (321470): wrapper (7.7.26015): starting
11:20:42 (321470): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 11:20:42] Arguments: --nthreads 4
[2024-05-18 11:20:42] Threads: 4
[2024-05-18 11:20:42] Checking for CVMFS
[2024-05-18 11:20:42] No cvmfs_config command found, will try listing directly
[2024-05-18 11:20:42] CVMFS is ok
[2024-05-18 11:20:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 11:20:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 11:20:42] Further information can be found at the LHC@home message board.
[2024-05-18 11:20:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 11:20:42] Checking for apptainer binary...
[2024-05-18 11:20:42] which: no apptainer in ((null))
[2024-05-18 11:20:42] apptainer is not installed, using version from CVMFS
[2024-05-18 11:20:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 11:20:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-18 11:20:43] apptainer works
[2024-05-18 11:20:43] Set ATHENA_PROC_NUMBER=4
[2024-05-18 11:20:43] Set ATHENA_CORE_NUMBER=4
[2024-05-18 11:20:43] Starting ATLAS job with PandaID=6207399878
[2024-05-18 11:20:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 13:07:19]  *** The last 200 lines of the pilot log: ***
[2024-05-18 13:07:19] 2024-05-18 11:06:57,028 | INFO     | chi2: 4.6079565353884115
[2024-05-18 13:07:19] 2024-05-18 11:06:57,028 | INFO     | model: linear, x: [1716024078.0, 1716024139.0, 1716024200.0, 1716024261.0, 1716024322.0, 1716024383.0, 1716024444.0, 1716024505.0, 1716024566.0, 1716024627.0, 1716
[2024-05-18 13:07:19] 2024-05-18 11:06:57,028 | INFO     | sum of square deviations: 300842850.0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | sum of deviations: 30074497550.000008
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | mean x: 1716027067.0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | mean y: 2290967.373737374
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | -- intersect: -171544587485.03156
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | intersect: -171544587485.03156
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | chi2: 4.6058211758499175
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | current chi2=4.6058211758499175 (change=0.0463407048676533 %)
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | right removable region: 98
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | model: linear, x: [1716024383.0, 1716024444.0, 1716024505.0, 1716024566.0, 1716024627.0, 1716024688.0, 1716024749.0, 1716024810.0, 1716024871.0, 1716024932.0, 1716
[2024-05-18 13:07:19] 2024-05-18 11:06:57,029 | INFO     | sum of square deviations: 300842850.0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,030 | INFO     | sum of deviations: 7173287619.000001
[2024-05-18 13:07:19] 2024-05-18 11:06:57,030 | INFO     | mean x: 1716027372.0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,030 | INFO     | mean y: 2370171.757575758
[2024-05-18 13:07:19] 2024-05-18 11:06:57,030 | INFO     | -- intersect: -40914533458.93436
[2024-05-18 13:07:19] 2024-05-18 11:06:57,030 | INFO     | intersect: -40914533458.93436
[2024-05-18 13:07:19] 2024-05-18 11:06:57,030 | INFO     | chi2: 1.8600830122637504
[2024-05-18 13:07:19] 2024-05-18 11:06:57,030 | INFO     | current chi2=1.8600830122637504 (change=59.633234428784355 %)
[2024-05-18 13:07:19] 2024-05-18 11:06:57,031 | INFO     | model: linear, x: [1716024688.0, 1716024749.0, 1716024810.0, 1716024871.0, 1716024932.0, 1716024993.0, 1716025054.0, 1716025115.0, 1716025176.0, 1716025237.0, 1716
[2024-05-18 13:07:19] 2024-05-18 11:06:57,031 | INFO     | sum of square deviations: 257521107.5
[2024-05-18 13:07:19] 2024-05-18 11:06:57,031 | INFO     | sum of deviations: -12010913725.000002
[2024-05-18 13:07:19] 2024-05-18 11:06:57,031 | INFO     | mean x: 1716027524.5
[2024-05-18 13:07:19] 2024-05-18 11:06:57,031 | INFO     | mean y: 2437721.1063829786
[2024-05-18 13:07:19] 2024-05-18 11:06:57,031 | INFO     | -- intersect: 80038822880.31058
[2024-05-18 13:07:19] 2024-05-18 11:06:57,031 | INFO     | intersect: 80038822880.31058
[2024-05-18 13:07:19] 2024-05-18 11:06:57,032 | INFO     | chi2: 0.16564727165624862
[2024-05-18 13:07:19] 2024-05-18 11:06:57,032 | INFO     | current chi2=0.16564727165624862 (change=91.09463015552981 %)
[2024-05-18 13:07:19] 2024-05-18 11:06:57,032 | INFO     | model: linear, x: [1716024993.0, 1716025054.0, 1716025115.0, 1716025176.0, 1716025237.0, 1716025298.0, 1716025359.0, 1716025420.0, 1716025481.0, 1716025542.0, 1716
[2024-05-18 13:07:19] 2024-05-18 11:06:57,032 | INFO     | sum of square deviations: 218571540.0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,032 | INFO     | sum of deviations: -13781301474.999994
[2024-05-18 13:07:19] 2024-05-18 11:06:57,032 | INFO     | mean x: 1716027677.0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,032 | INFO     | mean y: 2444420.0224719103
[2024-05-18 13:07:19] 2024-05-18 11:06:57,032 | INFO     | -- intersect: 108200862000.74188
[2024-05-18 13:07:19] 2024-05-18 11:06:57,032 | INFO     | intersect: 108200862000.74188
[2024-05-18 13:07:19] 2024-05-18 11:06:57,033 | INFO     | chi2: 0.08749030138310135
[2024-05-18 13:07:19] 2024-05-18 11:06:57,033 | INFO     | current chi2=0.08749030138310135 (change=47.18276944237192 %)
[2024-05-18 13:07:19] 2024-05-18 11:06:57,033 | INFO     | model: linear, x: [1716025298.0, 1716025359.0, 1716025420.0, 1716025481.0, 1716025542.0, 1716025603.0, 1716025664.0, 1716025725.0, 1716025786.0, 1716025847.0, 1716
[2024-05-18 13:07:19] 2024-05-18 11:06:57,033 | INFO     | sum of square deviations: 183761585.0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,033 | INFO     | sum of deviations: -11853021142.0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,033 | INFO     | mean x: 1716027829.5
[2024-05-18 13:07:19] 2024-05-18 11:06:57,033 | INFO     | mean y: 2435866.595238095
[2024-05-18 13:07:19] 2024-05-18 11:06:57,033 | INFO     | -- intersect: 110689956021.16876
[2024-05-18 13:07:19] 2024-05-18 11:06:57,034 | INFO     | intersect: 110689956021.16876
[2024-05-18 13:07:19] 2024-05-18 11:06:57,034 | INFO     | chi2: 0.08355326523130742
[2024-05-18 13:07:19] 2024-05-18 11:06:57,034 | INFO     | current chi2=0.08355326523130742 (change=4.4999686703037955 %)
[2024-05-18 13:07:19] 2024-05-18 11:06:57,034 | INFO     | left removable region: 40
[2024-05-18 13:07:19] 2024-05-18 11:06:57,034 | INFO     | model: linear, x: [1716026518.0, 1716026579.0, 1716026640.0, 1716026701.0, 1716026762.0, 1716026823.0, 1716026884.0, 1716026945.0, 1716027006.0, 1716027067.0, 1716
[2024-05-18 13:07:19] 2024-05-18 11:06:57,034 | INFO     | sum of square deviations: 60482994.5
[2024-05-18 13:07:19] 2024-05-18 11:06:57,034 | INFO     | sum of deviations: -1795692837.5
[2024-05-18 13:07:19] 2024-05-18 11:06:57,034 | INFO     | mean x: 1716028256.5
[2024-05-18 13:07:19] 2024-05-18 11:06:57,034 | INFO     | mean y: 2376851.5344827585
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | -- intersect: 50949914661.43348
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | intersect: 50949914661.43348
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | chi2: 0.03368367805820321
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | -- intersect: 50949914661.43348
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | current memory leak: -29.69 B/s (using 58 data points, chi2=0.03)
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | ..............................
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | . Timing measurements:
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | . get job = 0 s
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | . initial setup = 1 s
[2024-05-18 13:07:19] 2024-05-18 11:06:57,035 | INFO     | . payload setup = 6 s
[2024-05-18 13:07:19] 2024-05-18 11:06:57,036 | INFO     | . stage-in = 0 s
[2024-05-18 13:07:19] 2024-05-18 11:06:57,036 | INFO     | . payload execution = 6332 s
[2024-05-18 13:07:19] 2024-05-18 11:06:57,036 | INFO     | . stage-out = 0 s
[2024-05-18 13:07:19] 2024-05-18 11:06:57,036 | INFO     | . log creation = 0 s
[2024-05-18 13:07:19] 2024-05-18 11:06:57,036 | INFO     | ..............................
[2024-05-18 13:07:19] 2024-05-18 11:06:57,399 | INFO     | 
[2024-05-18 13:07:19] 2024-05-18 11:06:57,400 | INFO     | job summary report
[2024-05-18 13:07:19] 2024-05-18 11:06:57,400 | INFO     | --------------------------------------------------
[2024-05-18 13:07:19] 2024-05-18 11:06:57,403 | INFO     | PanDA job id: 6207399878
[2024-05-18 13:07:19] 2024-05-18 11:06:57,404 | INFO     | task id: 38776104
[2024-05-18 13:07:19] 2024-05-18 11:06:57,404 | INFO     | errors: (none)
[2024-05-18 13:07:19] 2024-05-18 11:06:57,404 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 13:07:19] 2024-05-18 11:06:57,404 | INFO     | pilot state: finished 
[2024-05-18 13:07:19] 2024-05-18 11:06:57,404 | INFO     | transexitcode: 0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,404 | INFO     | exeerrorcode: 0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,404 | INFO     | exeerrordiag: 
[2024-05-18 13:07:19] 2024-05-18 11:06:57,405 | INFO     | exitcode: 0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,405 | INFO     | exitmsg: OK
[2024-05-18 13:07:19] 2024-05-18 11:06:57,405 | INFO     | cpuconsumptiontime: 22610 s
[2024-05-18 13:07:19] 2024-05-18 11:06:57,405 | INFO     | nevents: 400
[2024-05-18 13:07:19] 2024-05-18 11:06:57,405 | INFO     | neventsw: 0
[2024-05-18 13:07:19] 2024-05-18 11:06:57,405 | INFO     | pid: 333625
[2024-05-18 13:07:19] 2024-05-18 11:06:57,405 | INFO     | pgrp: 333625
[2024-05-18 13:07:19] 2024-05-18 11:06:57,405 | INFO     | corecount: 4
[2024-05-18 13:07:19] 2024-05-18 11:06:57,405 | INFO     | event service: False
[2024-05-18 13:07:19] 2024-05-18 11:06:57,406 | INFO     | sizes: {0: 2392262, 4: 2392468, 11: 2392496, 6341: 2419508, 6342: 2428548, 6349: 2428662}
[2024-05-18 13:07:19] 2024-05-18 11:06:57,406 | INFO     | --------------------------------------------------
[2024-05-18 13:07:19] 2024-05-18 11:06:57,406 | INFO     | 
[2024-05-18 13:07:19] 2024-05-18 11:06:57,406 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/1
[2024-05-18 13:07:19] 2024-05-18 11:06:57,432 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,432 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,432 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,432 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,434 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 13:07:19] 2024-05-18 11:06:57,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,434 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 13:07:19] 2024-05-18 11:06:57,434 | INFO     | job 6207399878 has completed (purged errors)
[2024-05-18 13:07:19] 2024-05-18 11:06:57,434 | INFO     | overall cleanup function is called
[2024-05-18 13:07:19] 2024-05-18 11:06:58,442 | INFO     | --- collectZombieJob: --- 10, [333625]
[2024-05-18 13:07:19] 2024-05-18 11:06:58,443 | INFO     | zombie collector waiting for pid 333625
[2024-05-18 13:07:19] 2024-05-18 11:06:58,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 13:07:19] 2024-05-18 11:06:59,448 | INFO     | collected zombie processes
[2024-05-18 13:07:19] 2024-05-18 11:06:59,448 | INFO     | will now attempt to kill all subprocesses of pid=333625
[2024-05-18 13:07:19] 2024-05-18 11:06:59,686 | INFO     | process IDs to be killed: [333625] (in reverse order)
[2024-05-18 13:07:19] 2024-05-18 11:06:59,858 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 13:07:19] 2024-05-18 11:06:59,859 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 13:07:19] 2024-05-18 11:06:59,879 | INFO     | did not find any defunct processes belonging to 333625
[2024-05-18 13:07:19] 2024-05-18 11:06:59,896 | INFO     | did not find any defunct processes belonging to 333625
[2024-05-18 13:07:19] 2024-05-18 11:06:59,897 | INFO     | ready for new job
[2024-05-18 13:07:19] 2024-05-18 11:06:59,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 13:07:19] 2024-05-18 11:06:59,899 | INFO     | *************************************
[2024-05-18 13:07:19] 2024-05-18 11:06:59,899 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 13:07:19] 2024-05-18 11:06:59,899 | INFO     | *************************************
[2024-05-18 13:07:19] 2024-05-18 11:06:59,899 | INFO     | 
[2024-05-18 13:07:19] 2024-05-18 11:06:59,910 | INFO     | architecture information:
[2024-05-18 13:07:19] 2024-05-18 11:06:59,910 | INFO     | executing command: cat /etc/os-release
[2024-05-18 13:07:19] 2024-05-18 11:06:59,924 | INFO     | cat /etc/os-release:
[2024-05-18 13:07:19] NAME="CentOS Linux"
[2024-05-18 13:07:19] VERSION="7 (Core)"
[2024-05-18 13:07:19] ID="centos"
[2024-05-18 13:07:19] ID_LIKE="rhel fedora"
[2024-05-18 13:07:19] VERSION_ID="7"
[2024-05-18 13:07:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 13:07:19] ANSI_COLOR="0;31"
[2024-05-18 13:07:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 13:07:19] HOME_URL="https://www.centos.org/"
[2024-05-18 13:07:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 13:07:19] 
[2024-05-18 13:07:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 13:07:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 13:07:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 13:07:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 13:07:19] 
[2024-05-18 13:07:19] 2024-05-18 11:06:59,924 | INFO     | *************************************
[2024-05-18 13:07:19] 2024-05-18 11:07:00,427 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/1
[2024-05-18 13:07:19] 2024-05-18 11:07:00,446 | INFO     | sufficient remaining disk space (2972995026944 B)
[2024-05-18 13:07:19] 2024-05-18 11:07:00,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 13:07:19] 2024-05-18 11:07:00,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 13:07:19] 2024-05-18 11:07:00,447 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 13:07:19] 2024-05-18 11:07:00,447 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 13:07:19] 2024-05-18 11:07:00,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 13:07:19] 2024-05-18 11:07:00,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 13:07:19] 2024-05-18 11:07:00,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 13:07:19] 2024-05-18 11:07:00,561 | INFO     | all payload control threads have been joined
[2024-05-18 13:07:19] 2024-05-18 11:07:00,601 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 13:07:19] 2024-05-18 11:07:01,036 | INFO     | all job control threads have been joined
[2024-05-18 13:07:19] 2024-05-18 11:07:01,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 13:07:19] 2024-05-18 11:07:01,157 | INFO     | aborting loop
[2024-05-18 13:07:19] 2024-05-18 11:07:01,323 | INFO     | all data control threads have been joined
[2024-05-18 13:07:19] 2024-05-18 11:07:01,451 | INFO     | [job] retrieve thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:01,484 | INFO     | [payload] validate_post thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:01,567 | INFO     | [payload] control thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:01,595 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:01,661 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:01,981 | INFO     | [payload] failed_post thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:02,041 | INFO     | [job] control thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:02,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 13:07:19] 2024-05-18 11:07:02,165 | INFO     | [job] job monitor thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:02,177 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:02,329 | INFO     | [data] control thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:02,550 | INFO     | [data] copytool_out thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:02,866 | INFO     | [data] copytool_in thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:02,895 | INFO     | [job] validate thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:03,117 | INFO     | [job] queue monitor thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:04,607 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:11,459 | INFO     | job.realtimelogging is not enabled
[2024-05-18 13:07:19] 2024-05-18 11:07:12,464 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 13:07:19] 2024-05-18 11:07:13,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46955499660352)>', '<ExcThread(monitor, started 46956143449856)>']
[2024-05-18 13:07:19] 2024-05-18 11:07:13,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 13:07:19] 2024-05-18 11:07:13,514 | INFO     | [monitor] control thread has ended
[2024-05-18 13:07:19] 2024-05-18 11:07:18,389 | INFO     | all workflow threads have been joined
[2024-05-18 13:07:19] 2024-05-18 11:07:18,389 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 13:07:19] 2024-05-18 11:07:18,389 | INFO     | traces error code: 0
[2024-05-18 13:07:19] 2024-05-18 11:07:18,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 13:07:19] 2024-05-18 11:07:18,488 [wrapper] ==== pilot stdout END ====
[2024-05-18 13:07:19] 2024-05-18 11:07:18,490 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 13:07:19] 2024-05-18 11:07:18,491 [wrapper] pilotpid: 326069
[2024-05-18 13:07:19] 2024-05-18 11:07:18,493 [wrapper] Pilot exit status: 0
[2024-05-18 13:07:19] 2024-05-18 11:07:18,501 [wrapper] pandaids: 6207399878
[2024-05-18 13:07:19] 2024-05-18 11:07:18,575 [wrapper] cleanup: SIGTERM to supervisor_pilot  558351 326070
[2024-05-18 13:07:19] 2024-05-18 11:07:18,577 [wrapper] Test setup, not cleaning
[2024-05-18 13:07:19] 2024-05-18 11:07:18,578 [wrapper] ==== wrapper stdout END ====
[2024-05-18 13:07:19] 2024-05-18 11:07:18,581 [wrapper] ==== wrapper stderr END ====
[2024-05-18 13:07:19] 2024-05-18 11:07:18,585 [wrapper] apfmon messages muted
[2024-05-18 13:07:19]  *** Error codes and diagnostics ***
[2024-05-18 13:07:19]     "exeErrorCode": 0,
[2024-05-18 13:07:19]     "exeErrorDiag": "",
[2024-05-18 13:07:19]     "pilotErrorCode": 0,
[2024-05-18 13:07:19]     "pilotErrorDiag": "",
[2024-05-18 13:07:19]  *** Listing of results directory ***
[2024-05-18 13:07:19] total 820372
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc    467845 May 16 16:59 pilot3.tar.gz
[2024-05-18 13:07:19] -rwx------ 1 boinc boinc     32251 May 16 17:05 runpilot2-wrapper.sh
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc      5633 May 16 17:05 queuedata.json
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc       100 May 18 11:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 13:07:19] -rwxr-xr-x 1 boinc boinc      7986 May 18 11:20 run_atlas
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc       105 May 18 11:20 job.xml
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc      6646 May 18 11:20 init_data.xml
[2024-05-18 13:07:19] -rw-r--r-- 2 boinc boinc 600846104 May 18 11:20 EVNT.38776100._000048.pool.root.1
[2024-05-18 13:07:19] -rw-r--r-- 2 boinc boinc     17537 May 18 11:20 start_atlas.sh
[2024-05-18 13:07:19] drwxrwx--x 2 boinc boinc      4096 May 18 11:20 shared
[2024-05-18 13:07:19] -rw-r--r-- 2 boinc boinc    480009 May 18 11:20 input.tar.gz
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc         0 May 18 11:20 boinc_lockfile
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc      2640 May 18 11:20 pandaJob.out
[2024-05-18 13:07:19] -rw------- 1 boinc boinc       424 May 18 11:20 setup.sh.local
[2024-05-18 13:07:19] -rw------- 1 boinc boinc   1019073 May 18 11:20 agis_schedconf.cvmfs.json
[2024-05-18 13:07:19] -rw------- 1 boinc boinc         0 May 18 11:20 agis_ddmendpoints.agis.ALL.json
[2024-05-18 13:07:19] -rw------- 1 boinc boinc   1324701 May 18 11:20 cric_ddmendpoints.json
[2024-05-18 13:07:19] drwx------ 4 boinc boinc      4096 May 18 11:20 pilot3
[2024-05-18 13:07:19] -rw------- 1 boinc boinc        95 May 18 13:06 pilot_heartbeat.json
[2024-05-18 13:07:19] -rw------- 1 boinc boinc 233850096 May 18 13:06 HITS.38776104._010482.pool.root.1
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc       530 May 18 13:06 boinc_task_state.xml
[2024-05-18 13:07:19] -rw------- 1 boinc boinc      1040 May 18 13:06 memory_monitor_summary.json
[2024-05-18 13:07:19] -rw------- 1 boinc boinc    258550 May 18 13:06 log.38776104._010482.job.log.tgz.1
[2024-05-18 13:07:19] -rw------- 1 boinc boinc      7721 May 18 13:06 heartbeat.json
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc        27 May 18 13:07 wrapper_checkpoint.txt
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc      8192 May 18 13:07 boinc_mmap_file
[2024-05-18 13:07:19] -rw------- 1 boinc boinc      4418 May 18 13:07 pilotlog.txt
[2024-05-18 13:07:19] -rw------- 1 boinc boinc    657416 May 18 13:07 log.38776104._010482.job.log.1
[2024-05-18 13:07:19] -rw------- 1 boinc boinc       357 May 18 13:07 output.list
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc       620 May 18 13:07 runtime_log
[2024-05-18 13:07:19] -rw------- 1 boinc boinc    931840 May 18 13:07 result.tar.gz
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc     11428 May 18 13:07 runtime_log.err
[2024-05-18 13:07:19] -rw------- 1 boinc boinc       656 May 18 13:07 YYGODmErrR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmagPKDmF8DaHn.diag
[2024-05-18 13:07:19] -rw-r--r-- 1 boinc boinc     21320 May 18 13:07 stderr.txt
[2024-05-18 13:07:19] HITS file was successfully produced:
[2024-05-18 13:07:19] -rw------- 1 boinc boinc 233850096 May 18 13:06 shared/HITS.pool.root.1
[2024-05-18 13:07:19]  *** Contents of shared directory: ***
[2024-05-18 13:07:19] total 816548
[2024-05-18 13:07:19] -rw-r--r-- 2 boinc boinc 600846104 May 18 11:20 ATLAS.root_0
[2024-05-18 13:07:19] -rw-r--r-- 2 boinc boinc     17537 May 18 11:20 start_atlas.sh
[2024-05-18 13:07:19] -rw-r--r-- 2 boinc boinc    480009 May 18 11:20 input.tar.gz
[2024-05-18 13:07:19] -rw------- 1 boinc boinc 233850096 May 18 13:06 HITS.pool.root.1
[2024-05-18 13:07:19] -rw------- 1 boinc boinc    931840 May 18 13:07 result.tar.gz
13:07:21 (321470): run_atlas exited; CPU time 22389.716506
13:07:21 (321470): called boinc_finish(0)

</stderr_txt>
]]>

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