Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:07:00 (3909513): wrapper (7.7.26015): starting
18:07:00 (3909513): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 18:07:00] Arguments: --nthreads 4
[2024-05-23 18:07:00] Threads: 4
[2024-05-23 18:07:00] Checking for CVMFS
[2024-05-23 18:07:00] No cvmfs_config command found, will try listing directly
[2024-05-23 18:07:00] CVMFS is ok
[2024-05-23 18:07:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 18:07:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 18:07:00] Further information can be found at the LHC@home message board.
[2024-05-23 18:07:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 18:07:00] Checking for apptainer binary...
[2024-05-23 18:07:00] which: no apptainer in ((null))
[2024-05-23 18:07:00] apptainer is not installed, using version from CVMFS
[2024-05-23 18:07:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 18:07:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2024-05-23 18:07:01] apptainer works
[2024-05-23 18:07:01] Set ATHENA_PROC_NUMBER=4
[2024-05-23 18:07:01] Set ATHENA_CORE_NUMBER=4
[2024-05-23 18:07:01] Starting ATLAS job with PandaID=6207357435
[2024-05-23 18:07:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-23 20:53:19]  *** The last 200 lines of the pilot log: ***
[2024-05-23 20:53:19] 2024-05-23 18:52:58,083 | INFO     | chi2: 0.05724907893081011
[2024-05-23 20:53:19] 2024-05-23 18:52:58,083 | INFO     | current chi2=0.05724907893081011 (change=96.45746151858071 %)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,083 | INFO     | model: linear, x: [1716481370.0, 1716481431.0, 1716481492.0, 1716481553.0, 1716481614.0, 1716481675.0, 1716481736.0, 1716481797.0, 1716481858.0, 1716481919.0, 1716
[2024-05-23 20:53:19] 2024-05-23 18:52:58,084 | INFO     | sum of square deviations: 1005179777.0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,084 | INFO     | sum of deviations: 1310135948.5
[2024-05-23 20:53:19] 2024-05-23 18:52:58,084 | INFO     | mean x: 1716485853.5
[2024-05-23 20:53:19] 2024-05-23 18:52:58,085 | INFO     | mean y: 2342509.831081081
[2024-05-23 20:53:19] 2024-05-23 18:52:58,085 | INFO     | -- intersect: -2234898900.3311677
[2024-05-23 20:53:19] 2024-05-23 18:52:58,085 | INFO     | intersect: -2234898900.3311677
[2024-05-23 20:53:19] 2024-05-23 18:52:58,085 | INFO     | chi2: 0.0005086956512119838
[2024-05-23 20:53:19] 2024-05-23 18:52:58,085 | INFO     | current chi2=0.0005086956512119838 (change=99.11143434844291 %)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,085 | INFO     | model: linear, x: [1716481675.0, 1716481736.0, 1716481797.0, 1716481858.0, 1716481919.0, 1716481980.0, 1716482041.0, 1716482102.0, 1716482163.0, 1716482224.0, 1716
[2024-05-23 20:53:19] 2024-05-23 18:52:58,085 | INFO     | sum of square deviations: 906703512.0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,086 | INFO     | sum of deviations: 811474033.000001
[2024-05-23 20:53:19] 2024-05-23 18:52:58,086 | INFO     | mean x: 1716486006.0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,086 | INFO     | mean y: 2343280.055944056
[2024-05-23 20:53:19] 2024-05-23 18:52:58,086 | INFO     | -- intersect: -1533863212.4108944
[2024-05-23 20:53:19] 2024-05-23 18:52:58,086 | INFO     | intersect: -1533863212.4108944
[2024-05-23 20:53:19] 2024-05-23 18:52:58,086 | INFO     | chi2: 0.00021196335126093512
[2024-05-23 20:53:19] 2024-05-23 18:52:58,086 | INFO     | current chi2=0.00021196335126093512 (change=58.33199069897186 %)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,087 | INFO     | model: linear, x: [1716481980.0, 1716482041.0, 1716482102.0, 1716482163.0, 1716482224.0, 1716482285.0, 1716482346.0, 1716482407.0, 1716482468.0, 1716482529.0, 1716
[2024-05-23 20:53:19] 2024-05-23 18:52:58,087 | INFO     | sum of square deviations: 814878534.5
[2024-05-23 20:53:19] 2024-05-23 18:52:58,088 | INFO     | sum of deviations: 524295640.49999976
[2024-05-23 20:53:19] 2024-05-23 18:52:58,088 | INFO     | mean x: 1716486158.5
[2024-05-23 20:53:19] 2024-05-23 18:52:58,088 | INFO     | mean y: 2343755.1666666665
[2024-05-23 20:53:19] 2024-05-23 18:52:58,088 | INFO     | -- intersect: -1102049319.1119902
[2024-05-23 20:53:19] 2024-05-23 18:52:58,088 | INFO     | intersect: -1102049319.1119902
[2024-05-23 20:53:19] 2024-05-23 18:52:58,088 | INFO     | chi2: 0.00011216514665249633
[2024-05-23 20:53:19] 2024-05-23 18:52:58,088 | INFO     | current chi2=0.00011216514665249633 (change=47.08276407914655 %)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,089 | INFO     | model: linear, x: [1716482285.0, 1716482346.0, 1716482407.0, 1716482468.0, 1716482529.0, 1716482590.0, 1716482651.0, 1716482712.0, 1716482773.0, 1716482834.0, 1716
[2024-05-23 20:53:19] 2024-05-23 18:52:58,089 | INFO     | sum of square deviations: 729472282.0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,090 | INFO     | sum of deviations: 355013961.0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,090 | INFO     | mean x: 1716486311.0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,090 | INFO     | mean y: 2344056.5563909775
[2024-05-23 20:53:19] 2024-05-23 18:52:58,090 | INFO     | -- intersect: -833022302.5322027
[2024-05-23 20:53:19] 2024-05-23 18:52:58,090 | INFO     | intersect: -833022302.5322027
[2024-05-23 20:53:19] 2024-05-23 18:52:58,091 | INFO     | chi2: 7.913779848274338e-05
[2024-05-23 20:53:19] 2024-05-23 18:52:58,091 | INFO     | current chi2=7.913779848274338e-05 (change=29.44528595150542 %)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,091 | INFO     | model: linear, x: [1716482590.0, 1716482651.0, 1716482712.0, 1716482773.0, 1716482834.0, 1716482895.0, 1716482956.0, 1716483017.0, 1716483078.0, 1716483139.0, 1716
[2024-05-23 20:53:19] 2024-05-23 18:52:58,091 | INFO     | sum of square deviations: 650252192.0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,092 | INFO     | sum of deviations: 237246842.5
[2024-05-23 20:53:19] 2024-05-23 18:52:58,092 | INFO     | mean x: 1716486463.5
[2024-05-23 20:53:19] 2024-05-23 18:52:58,092 | INFO     | mean y: 2344283.3359375
[2024-05-23 20:53:19] 2024-05-23 18:52:58,092 | INFO     | -- intersect: -623921954.0862448
[2024-05-23 20:53:19] 2024-05-23 18:52:58,092 | INFO     | intersect: -623921954.0862448
[2024-05-23 20:53:19] 2024-05-23 18:52:58,092 | INFO     | chi2: 6.282517557986533e-05
[2024-05-23 20:53:19] 2024-05-23 18:52:58,092 | INFO     | current chi2=6.282517557986533e-05 (change=20.61293492569818 %)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,093 | INFO     | left removable region: 70
[2024-05-23 20:53:19] 2024-05-23 18:52:58,093 | INFO     | model: linear, x: [1716484725.0, 1716484786.0, 1716484847.0, 1716484908.0, 1716484969.0, 1716485030.0, 1716485091.0, 1716485152.0, 1716485213.0, 1716485274.0, 1716
[2024-05-23 20:53:19] 2024-05-23 18:52:58,093 | INFO     | sum of square deviations: 204163828.0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,093 | INFO     | sum of deviations: 207719762.0000001
[2024-05-23 20:53:19] 2024-05-23 18:52:58,093 | INFO     | mean x: 1716487348.0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,093 | INFO     | mean y: 2344154.4827586208
[2024-05-23 20:53:19] 2024-05-23 18:52:58,094 | INFO     | -- intersect: -1744039359.6555605
[2024-05-23 20:53:19] 2024-05-23 18:52:58,094 | INFO     | intersect: -1744039359.6555605
[2024-05-23 20:53:19] 2024-05-23 18:52:58,094 | INFO     | chi2: 8.346735457865506e-06
[2024-05-23 20:53:19] 2024-05-23 18:52:58,094 | INFO     | -- intersect: -1744039359.6555605
[2024-05-23 20:53:19] 2024-05-23 18:52:58,094 | INFO     | current memory leak: 1.02 B/s (using 87 data points, chi2=0.00)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,095 | INFO     | ..............................
[2024-05-23 20:53:19] 2024-05-23 18:52:58,095 | INFO     | . Timing measurements:
[2024-05-23 20:53:19] 2024-05-23 18:52:58,095 | INFO     | . get job = 0 s
[2024-05-23 20:53:19] 2024-05-23 18:52:58,095 | INFO     | . initial setup = 1 s
[2024-05-23 20:53:19] 2024-05-23 18:52:58,095 | INFO     | . payload setup = 5 s
[2024-05-23 20:53:19] 2024-05-23 18:52:58,095 | INFO     | . stage-in = 0 s
[2024-05-23 20:53:19] 2024-05-23 18:52:58,095 | INFO     | . payload execution = 9918 s
[2024-05-23 20:53:19] 2024-05-23 18:52:58,095 | INFO     | . stage-out = 0 s
[2024-05-23 20:53:19] 2024-05-23 18:52:58,096 | INFO     | . log creation = 0 s
[2024-05-23 20:53:19] 2024-05-23 18:52:58,096 | INFO     | ..............................
[2024-05-23 20:53:19] 2024-05-23 18:52:58,166 | INFO     | 
[2024-05-23 20:53:19] 2024-05-23 18:52:58,167 | INFO     | job summary report
[2024-05-23 20:53:19] 2024-05-23 18:52:58,167 | INFO     | --------------------------------------------------
[2024-05-23 20:53:19] 2024-05-23 18:52:58,167 | INFO     | PanDA job id: 6207357435
[2024-05-23 20:53:19] 2024-05-23 18:52:58,167 | INFO     | task id: 38776125
[2024-05-23 20:53:19] 2024-05-23 18:52:58,167 | INFO     | errors: (none)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,167 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-23 20:53:19] 2024-05-23 18:52:58,167 | INFO     | pilot state: finished 
[2024-05-23 20:53:19] 2024-05-23 18:52:58,167 | INFO     | transexitcode: 0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,167 | INFO     | exeerrorcode: 0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | exeerrordiag: 
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | exitcode: 0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | exitmsg: OK
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | cpuconsumptiontime: 37042 s
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | nevents: 400
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | neventsw: 0
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | pid: 3934304
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | pgrp: 3934304
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | corecount: 4
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | event service: False
[2024-05-23 20:53:19] 2024-05-23 18:52:58,168 | INFO     | sizes: {0: 2382294, 1: 2383841, 5: 2384047, 12: 2384103, 9927: 2412636, 9928: 2421802, 9932: 2421916}
[2024-05-23 20:53:19] 2024-05-23 18:52:58,169 | INFO     | --------------------------------------------------
[2024-05-23 20:53:19] 2024-05-23 18:52:58,169 | INFO     | 
[2024-05-23 20:53:19] 2024-05-23 18:52:58,169 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-05-23 20:53:19] 2024-05-23 18:52:58,195 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,195 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,195 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,195 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,196 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,197 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,197 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-23 20:53:19] 2024-05-23 18:52:58,197 | INFO     | job 6207357435 has completed (purged errors)
[2024-05-23 20:53:19] 2024-05-23 18:52:58,197 | INFO     | overall cleanup function is called
[2024-05-23 20:53:19] 2024-05-23 18:52:59,205 | INFO     | --- collectZombieJob: --- 10, [3934304]
[2024-05-23 20:53:19] 2024-05-23 18:52:59,205 | INFO     | zombie collector waiting for pid 3934304
[2024-05-23 20:53:19] 2024-05-23 18:52:59,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-23 20:53:19] 2024-05-23 18:53:00,210 | INFO     | collected zombie processes
[2024-05-23 20:53:19] 2024-05-23 18:53:00,211 | INFO     | will now attempt to kill all subprocesses of pid=3934304
[2024-05-23 20:53:19] 2024-05-23 18:53:00,407 | INFO     | process IDs to be killed: [3934304] (in reverse order)
[2024-05-23 20:53:19] 2024-05-23 18:53:00,606 | WARNING  | found no corresponding commands to process id(s)
[2024-05-23 20:53:19] 2024-05-23 18:53:00,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-23 20:53:19] 2024-05-23 18:53:00,624 | INFO     | did not find any defunct processes belonging to 3934304
[2024-05-23 20:53:19] 2024-05-23 18:53:00,642 | INFO     | did not find any defunct processes belonging to 3934304
[2024-05-23 20:53:19] 2024-05-23 18:53:00,642 | INFO     | ready for new job
[2024-05-23 20:53:19] 2024-05-23 18:53:00,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-23 20:53:19] 2024-05-23 18:53:00,644 | INFO     | *************************************
[2024-05-23 20:53:19] 2024-05-23 18:53:00,644 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-23 20:53:19] 2024-05-23 18:53:00,644 | INFO     | *************************************
[2024-05-23 20:53:19] 2024-05-23 18:53:00,644 | INFO     | 
[2024-05-23 20:53:19] 2024-05-23 18:53:00,652 | INFO     | architecture information:
[2024-05-23 20:53:19] 2024-05-23 18:53:00,652 | INFO     | executing command: cat /etc/os-release
[2024-05-23 20:53:19] 2024-05-23 18:53:00,674 | INFO     | cat /etc/os-release:
[2024-05-23 20:53:19] NAME="CentOS Linux"
[2024-05-23 20:53:19] VERSION="7 (Core)"
[2024-05-23 20:53:19] ID="centos"
[2024-05-23 20:53:19] ID_LIKE="rhel fedora"
[2024-05-23 20:53:19] VERSION_ID="7"
[2024-05-23 20:53:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-23 20:53:19] ANSI_COLOR="0;31"
[2024-05-23 20:53:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-23 20:53:19] HOME_URL="https://www.centos.org/"
[2024-05-23 20:53:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-23 20:53:19] 
[2024-05-23 20:53:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-23 20:53:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-23 20:53:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-23 20:53:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-23 20:53:19] 
[2024-05-23 20:53:19] 2024-05-23 18:53:00,675 | INFO     | *************************************
[2024-05-23 20:53:19] 2024-05-23 18:53:01,177 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-05-23 20:53:19] 2024-05-23 18:53:01,200 | INFO     | sufficient remaining disk space (3191284432896 B)
[2024-05-23 20:53:19] 2024-05-23 18:53:01,201 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-23 20:53:19] 2024-05-23 18:53:01,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-23 20:53:19] 2024-05-23 18:53:01,201 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-23 20:53:19] 2024-05-23 18:53:01,202 | INFO     | found 0 job(s) in 20 queues
[2024-05-23 20:53:19] 2024-05-23 18:53:01,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-23 20:53:19] 2024-05-23 18:53:01,202 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-23 20:53:19] 2024-05-23 18:53:01,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-23 20:53:19] 2024-05-23 18:53:01,369 | INFO     | aborting loop
[2024-05-23 20:53:19] 2024-05-23 18:53:01,486 | INFO     | all payload control threads have been joined
[2024-05-23 20:53:19] 2024-05-23 18:53:01,606 | INFO     | all data control threads have been joined
[2024-05-23 20:53:19] 2024-05-23 18:53:01,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-23 20:53:19] 2024-05-23 18:53:02,041 | INFO     | all job control threads have been joined
[2024-05-23 20:53:19] 2024-05-23 18:53:02,206 | INFO     | [job] retrieve thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:02,374 | INFO     | [job] job monitor thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:02,401 | INFO     | [payload] failed_post thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:02,492 | INFO     | [payload] control thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:02,612 | INFO     | [data] control thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:02,934 | INFO     | [payload] execute_payloads thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:03,047 | INFO     | [job] control thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:03,077 | INFO     | [data] copytool_in thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:03,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-23 20:53:19] 2024-05-23 18:53:03,444 | INFO     | [payload] validate_pre thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:03,447 | INFO     | [job] validate thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:03,467 | INFO     | [job] create_data_payload thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:03,600 | INFO     | [payload] validate_post thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:03,918 | INFO     | [data] copytool_out thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:04,182 | INFO     | [job] queue monitor thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:04,499 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-23 20:53:19] 2024-05-23 18:53:08,505 | INFO     | [data] queue_monitor thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:12,014 | INFO     | job.realtimelogging is not enabled
[2024-05-23 20:53:19] 2024-05-23 18:53:13,020 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-23 20:53:19] 2024-05-23 18:53:13,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47770147857472)>', '<ExcThread(monitor, started 47770325411584)>']
[2024-05-23 20:53:19] 2024-05-23 18:53:14,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-23 20:53:19] 2024-05-23 18:53:14,246 | INFO     | [monitor] control thread has ended
[2024-05-23 20:53:19] 2024-05-23 18:53:18,633 | INFO     | all workflow threads have been joined
[2024-05-23 20:53:19] 2024-05-23 18:53:18,634 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-23 20:53:19] 2024-05-23 18:53:18,634 | INFO     | traces error code: 0
[2024-05-23 20:53:19] 2024-05-23 18:53:18,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-23 20:53:19] 2024-05-23 18:53:18,735 [wrapper] ==== pilot stdout END ====
[2024-05-23 20:53:19] 2024-05-23 18:53:18,739 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-23 20:53:19] 2024-05-23 18:53:18,741 [wrapper] pilotpid: 3917573
[2024-05-23 20:53:19] 2024-05-23 18:53:18,743 [wrapper] Pilot exit status: 0
[2024-05-23 20:53:19] 2024-05-23 18:53:18,753 [wrapper] pandaids: 6207357435
[2024-05-23 20:53:19] 2024-05-23 18:53:18,896 [wrapper] cleanup: SIGTERM to supervisor_pilot  599121 3917574
[2024-05-23 20:53:19] 2024-05-23 18:53:18,901 [wrapper] Test setup, not cleaning
[2024-05-23 20:53:19] 2024-05-23 18:53:18,904 [wrapper] ==== wrapper stdout END ====
[2024-05-23 20:53:19] 2024-05-23 18:53:18,907 [wrapper] ==== wrapper stderr END ====
[2024-05-23 20:53:19] 2024-05-23 18:53:18,913 [wrapper] apfmon messages muted
[2024-05-23 20:53:19]  *** Error codes and diagnostics ***
[2024-05-23 20:53:19]     "exeErrorCode": 0,
[2024-05-23 20:53:19]     "exeErrorDiag": "",
[2024-05-23 20:53:19]     "pilotErrorCode": 0,
[2024-05-23 20:53:19]     "pilotErrorDiag": "",
[2024-05-23 20:53:19]  *** Listing of results directory ***
[2024-05-23 20:53:19] total 830624
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc    467845 May 16 16:20 pilot3.tar.gz
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc      5633 May 16 16:37 queuedata.json
[2024-05-23 20:53:19] -rwx------ 1 boinc boinc     32251 May 16 16:38 runpilot2-wrapper.sh
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc       100 May 23 18:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-23 20:53:19] -rwxr-xr-x 1 boinc boinc      7986 May 23 18:06 run_atlas
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc       105 May 23 18:06 job.xml
[2024-05-23 20:53:19] -rw-r--r-- 2 boinc boinc 601276653 May 23 18:07 EVNT.38776119._000373.pool.root.1
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc      6644 May 23 18:07 init_data.xml
[2024-05-23 20:53:19] drwxrwx--x 2 boinc boinc      4096 May 23 18:07 shared
[2024-05-23 20:53:19] -rw-r--r-- 2 boinc boinc    480016 May 23 18:07 input.tar.gz
[2024-05-23 20:53:19] -rw-r--r-- 2 boinc boinc     17537 May 23 18:07 start_atlas.sh
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc         0 May 23 18:07 boinc_lockfile
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc      2633 May 23 18:07 pandaJob.out
[2024-05-23 20:53:19] -rw------- 1 boinc boinc       424 May 23 18:07 setup.sh.local
[2024-05-23 20:53:19] -rw------- 1 boinc boinc   1009177 May 23 18:07 agis_schedconf.cvmfs.json
[2024-05-23 20:53:19] -rw------- 1 boinc boinc         0 May 23 18:07 agis_ddmendpoints.agis.ALL.json
[2024-05-23 20:53:19] -rw------- 1 boinc boinc   1319723 May 23 18:07 cric_ddmendpoints.json
[2024-05-23 20:53:19] drwx------ 4 boinc boinc      4096 May 23 18:07 pilot3
[2024-05-23 20:53:19] -rw------- 1 boinc boinc 243033289 May 23 20:52 HITS.38776125._013738.pool.root.1
[2024-05-23 20:53:19] -rw------- 1 boinc boinc        95 May 23 20:52 pilot_heartbeat.json
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc       530 May 23 20:52 boinc_task_state.xml
[2024-05-23 20:53:19] -rw------- 1 boinc boinc      1043 May 23 20:52 memory_monitor_summary.json
[2024-05-23 20:53:19] -rw------- 1 boinc boinc    297568 May 23 20:52 log.38776125._013738.job.log.tgz.1
[2024-05-23 20:53:19] -rw------- 1 boinc boinc      7717 May 23 20:52 heartbeat.json
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc      8192 May 23 20:53 boinc_mmap_file
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc        27 May 23 20:53 wrapper_checkpoint.txt
[2024-05-23 20:53:19] -rw------- 1 boinc boinc      4417 May 23 20:53 pilotlog.txt
[2024-05-23 20:53:19] -rw------- 1 boinc boinc   1061551 May 23 20:53 log.38776125._013738.job.log.1
[2024-05-23 20:53:19] -rw------- 1 boinc boinc       357 May 23 20:53 output.list
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc       620 May 23 20:53 runtime_log
[2024-05-23 20:53:19] -rw------- 1 boinc boinc   1382400 May 23 20:53 result.tar.gz
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc     11409 May 23 20:53 runtime_log.err
[2024-05-23 20:53:19] -rw------- 1 boinc boinc       656 May 23 20:53 3btKDmKQrR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmVEZKDmaUm1rm.diag
[2024-05-23 20:53:19] -rw-r--r-- 1 boinc boinc     21398 May 23 20:53 stderr.txt
[2024-05-23 20:53:19] HITS file was successfully produced:
[2024-05-23 20:53:19] -rw------- 1 boinc boinc 243033289 May 23 20:52 shared/HITS.pool.root.1
[2024-05-23 20:53:19]  *** Contents of shared directory: ***
[2024-05-23 20:53:19] total 826380
[2024-05-23 20:53:19] -rw-r--r-- 2 boinc boinc 601276653 May 23 18:07 ATLAS.root_0
[2024-05-23 20:53:19] -rw-r--r-- 2 boinc boinc    480016 May 23 18:07 input.tar.gz
[2024-05-23 20:53:19] -rw-r--r-- 2 boinc boinc     17537 May 23 18:07 start_atlas.sh
[2024-05-23 20:53:19] -rw------- 1 boinc boinc 243033289 May 23 20:52 HITS.pool.root.1
[2024-05-23 20:53:19] -rw------- 1 boinc boinc   1382400 May 23 20:53 result.tar.gz
20:53:21 (3909513): run_atlas exited; CPU time 36828.870571
20:53:21 (3909513): called boinc_finish(0)

</stderr_txt>
]]>

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