Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:21:20 (3153712): wrapper (7.7.26015): starting
21:21:20 (3153712): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 21:21:20] Arguments: --nthreads 4
[2024-05-18 21:21:20] Threads: 4
[2024-05-18 21:21:20] Checking for CVMFS
[2024-05-18 21:21:20] No cvmfs_config command found, will try listing directly
[2024-05-18 21:21:20] CVMFS is ok
[2024-05-18 21:21:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 21:21:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 21:21:20] Further information can be found at the LHC@home message board.
[2024-05-18 21:21:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 21:21:20] Checking for apptainer binary...
[2024-05-18 21:21:20] which: no apptainer in ((null))
[2024-05-18 21:21:20] apptainer is not installed, using version from CVMFS
[2024-05-18 21:21:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 21:21:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-18 21:21:21] apptainer works
[2024-05-18 21:21:21] Set ATHENA_PROC_NUMBER=4
[2024-05-18 21:21:21] Set ATHENA_CORE_NUMBER=4
[2024-05-18 21:21:21] Starting ATLAS job with PandaID=6207355418
[2024-05-18 21:21:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 23:42:06]  *** The last 200 lines of the pilot log: ***
[2024-05-18 23:42:06] 2024-05-18 21:41:50,346 | INFO     | fitting pss+swap vs Time
[2024-05-18 23:42:06] 2024-05-18 21:41:50,346 | INFO     | model: linear, x: [1716060116.0, 1716060177.0, 1716060238.0, 1716060299.0, 1716060360.0, 1716060421.0, 1716060482.0, 1716060543.0, 1716060604.0, 1716060665.0, 1716
[2024-05-18 23:42:06] 2024-05-18 21:41:50,346 | INFO     | sum of square deviations: 814878534.5
[2024-05-18 23:42:06] 2024-05-18 21:41:50,347 | INFO     | sum of deviations: 49358326869.5
[2024-05-18 23:42:06] 2024-05-18 21:41:50,347 | INFO     | mean x: 1716064294.5
[2024-05-18 23:42:06] 2024-05-18 21:41:50,347 | INFO     | mean y: 2239400.6304347827
[2024-05-18 23:42:06] 2024-05-18 21:41:50,347 | INFO     | -- intersect: -103942163097.32114
[2024-05-18 23:42:06] 2024-05-18 21:41:50,347 | INFO     | intersect: -103942163097.32114
[2024-05-18 23:42:06] 2024-05-18 21:41:50,347 | INFO     | chi2: 4.996118387064906
[2024-05-18 23:42:06] 2024-05-18 21:41:50,348 | INFO     | model: linear, x: [1716060116.0, 1716060177.0, 1716060238.0, 1716060299.0, 1716060360.0, 1716060421.0, 1716060482.0, 1716060543.0, 1716060604.0, 1716060665.0, 1716
[2024-05-18 23:42:06] 2024-05-18 21:41:50,348 | INFO     | sum of square deviations: 729472282.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,349 | INFO     | sum of deviations: 56226207526.99999
[2024-05-18 23:42:06] 2024-05-18 21:41:50,349 | INFO     | mean x: 1716064142.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,349 | INFO     | mean y: 2251192.037593985
[2024-05-18 23:42:06] 2024-05-18 21:41:50,349 | INFO     | -- intersect: -132268406595.25197
[2024-05-18 23:42:06] 2024-05-18 21:41:50,349 | INFO     | intersect: -132268406595.25197
[2024-05-18 23:42:06] 2024-05-18 21:41:50,349 | INFO     | chi2: 4.161847331679125
[2024-05-18 23:42:06] 2024-05-18 21:41:50,349 | INFO     | current chi2=4.161847331679125 (change=16.698384440723686 %)
[2024-05-18 23:42:06] 2024-05-18 21:41:50,349 | INFO     | right removable region: 132
[2024-05-18 23:42:06] 2024-05-18 21:41:50,350 | INFO     | model: linear, x: [1716060421.0, 1716060482.0, 1716060543.0, 1716060604.0, 1716060665.0, 1716060726.0, 1716060787.0, 1716060848.0, 1716060909.0, 1716060970.0, 1716
[2024-05-18 23:42:06] 2024-05-18 21:41:50,350 | INFO     | sum of square deviations: 729472282.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,351 | INFO     | sum of deviations: 17970513563.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,351 | INFO     | mean x: 1716064447.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,351 | INFO     | mean y: 2295225.2932330826
[2024-05-18 23:42:06] 2024-05-18 21:41:50,351 | INFO     | -- intersect: -42272867492.67223
[2024-05-18 23:42:06] 2024-05-18 21:41:50,351 | INFO     | intersect: -42272867492.67223
[2024-05-18 23:42:06] 2024-05-18 21:41:50,351 | INFO     | chi2: 2.4561092106752644
[2024-05-18 23:42:06] 2024-05-18 21:41:50,351 | INFO     | current chi2=2.4561092106752644 (change=50.839651497566564 %)
[2024-05-18 23:42:06] 2024-05-18 21:41:50,352 | INFO     | model: linear, x: [1716060726.0, 1716060787.0, 1716060848.0, 1716060909.0, 1716060970.0, 1716061031.0, 1716061092.0, 1716061153.0, 1716061214.0, 1716061275.0, 1716
[2024-05-18 23:42:06] 2024-05-18 21:41:50,352 | INFO     | sum of square deviations: 650252192.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,352 | INFO     | sum of deviations: -7285425078.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,352 | INFO     | mean x: 1716064599.5
[2024-05-18 23:42:06] 2024-05-18 21:41:50,353 | INFO     | mean y: 2343859.828125
[2024-05-18 23:42:06] 2024-05-18 21:41:50,353 | INFO     | -- intersect: 19229130362.787468
[2024-05-18 23:42:06] 2024-05-18 21:41:50,353 | INFO     | intersect: 19229130362.787468
[2024-05-18 23:42:06] 2024-05-18 21:41:50,353 | INFO     | chi2: 0.9395579441979163
[2024-05-18 23:42:06] 2024-05-18 21:41:50,353 | INFO     | current chi2=0.9395579441979163 (change=61.74608441211776 %)
[2024-05-18 23:42:06] 2024-05-18 21:41:50,353 | INFO     | model: linear, x: [1716061031.0, 1716061092.0, 1716061153.0, 1716061214.0, 1716061275.0, 1716061336.0, 1716061397.0, 1716061458.0, 1716061519.0, 1716061580.0, 1716
[2024-05-18 23:42:06] 2024-05-18 21:41:50,354 | INFO     | sum of square deviations: 576985702.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,354 | INFO     | sum of deviations: -10513917666.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,354 | INFO     | mean x: 1716064752.0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,354 | INFO     | mean y: 2350443.7804878047
[2024-05-18 23:42:06] 2024-05-18 21:41:50,355 | INFO     | -- intersect: 31272732793.831696
[2024-05-18 23:42:06] 2024-05-18 21:41:50,355 | INFO     | intersect: 31272732793.831696
[2024-05-18 23:42:06] 2024-05-18 21:41:50,355 | INFO     | chi2: 0.8837027669597729
[2024-05-18 23:42:06] 2024-05-18 21:41:50,355 | INFO     | current chi2=0.8837027669597729 (change=5.944835822321308 %)
[2024-05-18 23:42:06] 2024-05-18 21:41:50,355 | INFO     | left removable region: 30
[2024-05-18 23:42:06] 2024-05-18 21:41:50,355 | INFO     | model: linear, x: [1716061946.0, 1716062007.0, 1716062068.0, 1716062129.0, 1716062190.0, 1716062251.0, 1716062312.0, 1716062373.0, 1716062434.0, 1716062495.0, 1716
[2024-05-18 23:42:06] 2024-05-18 21:41:50,356 | INFO     | sum of square deviations: 329031285.5
[2024-05-18 23:42:06] 2024-05-18 21:41:50,356 | INFO     | sum of deviations: -2001140959.4999998
[2024-05-18 23:42:06] 2024-05-18 21:41:50,356 | INFO     | mean x: 1716065026.5
[2024-05-18 23:42:06] 2024-05-18 21:41:50,356 | INFO     | mean y: 2367673.225490196
[2024-05-18 23:42:06] 2024-05-18 21:41:50,357 | INFO     | -- intersect: 10439332682.422474
[2024-05-18 23:42:06] 2024-05-18 21:41:50,357 | INFO     | intersect: 10439332682.422474
[2024-05-18 23:42:06] 2024-05-18 21:41:50,357 | INFO     | chi2: 0.0023627992404656583
[2024-05-18 23:42:06] 2024-05-18 21:41:50,357 | INFO     | -- intersect: 10439332682.422474
[2024-05-18 23:42:06] 2024-05-18 21:41:50,357 | INFO     | current memory leak: -6.08 B/s (using 102 data points, chi2=0.00)
[2024-05-18 23:42:06] 2024-05-18 21:41:50,357 | INFO     | ..............................
[2024-05-18 23:42:06] 2024-05-18 21:41:50,358 | INFO     | . Timing measurements:
[2024-05-18 23:42:06] 2024-05-18 21:41:50,358 | INFO     | . get job = 0 s
[2024-05-18 23:42:06] 2024-05-18 21:41:50,358 | INFO     | . initial setup = 1 s
[2024-05-18 23:42:06] 2024-05-18 21:41:50,358 | INFO     | . payload setup = 5 s
[2024-05-18 23:42:06] 2024-05-18 21:41:50,358 | INFO     | . stage-in = 0 s
[2024-05-18 23:42:06] 2024-05-18 21:41:50,358 | INFO     | . payload execution = 8385 s
[2024-05-18 23:42:06] 2024-05-18 21:41:50,358 | INFO     | . stage-out = 0 s
[2024-05-18 23:42:06] 2024-05-18 21:41:50,358 | INFO     | . log creation = 0 s
[2024-05-18 23:42:06] 2024-05-18 21:41:50,358 | INFO     | ..............................
[2024-05-18 23:42:06] 2024-05-18 21:41:50,577 | INFO     | 
[2024-05-18 23:42:06] 2024-05-18 21:41:50,577 | INFO     | job summary report
[2024-05-18 23:42:06] 2024-05-18 21:41:50,577 | INFO     | --------------------------------------------------
[2024-05-18 23:42:06] 2024-05-18 21:41:50,577 | INFO     | PanDA job id: 6207355418
[2024-05-18 23:42:06] 2024-05-18 21:41:50,577 | INFO     | task id: 38776104
[2024-05-18 23:42:06] 2024-05-18 21:41:50,577 | INFO     | errors: (none)
[2024-05-18 23:42:06] 2024-05-18 21:41:50,577 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | pilot state: finished 
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | transexitcode: 0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | exeerrorcode: 0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | exeerrordiag: 
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | exitcode: 0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | exitmsg: OK
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | cpuconsumptiontime: 30797 s
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | nevents: 400
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | neventsw: 0
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | pid: 3165996
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | pgrp: 3165996
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | corecount: 4
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | event service: False
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | sizes: {0: 2392258, 4: 2392464, 11: 2392492, 8394: 2420331, 8397: 2429315, 8400: 2429371, 8404: 2429669}
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | --------------------------------------------------
[2024-05-18 23:42:06] 2024-05-18 21:41:50,578 | INFO     | 
[2024-05-18 23:42:06] 2024-05-18 21:41:50,579 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,597 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,598 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,598 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 23:42:06] 2024-05-18 21:41:50,598 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,598 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 23:42:06] 2024-05-18 21:41:50,598 | INFO     | job 6207355418 has completed (purged errors)
[2024-05-18 23:42:06] 2024-05-18 21:41:50,598 | INFO     | overall cleanup function is called
[2024-05-18 23:42:06] 2024-05-18 21:41:51,605 | INFO     | --- collectZombieJob: --- 10, [3165996]
[2024-05-18 23:42:06] 2024-05-18 21:41:51,605 | INFO     | zombie collector waiting for pid 3165996
[2024-05-18 23:42:06] 2024-05-18 21:41:51,605 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 23:42:06] 2024-05-18 21:41:52,610 | INFO     | collected zombie processes
[2024-05-18 23:42:06] 2024-05-18 21:41:52,611 | INFO     | will now attempt to kill all subprocesses of pid=3165996
[2024-05-18 23:42:06] 2024-05-18 21:41:52,789 | INFO     | process IDs to be killed: [3165996] (in reverse order)
[2024-05-18 23:42:06] 2024-05-18 21:41:52,939 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 23:42:06] 2024-05-18 21:41:52,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 23:42:06] 2024-05-18 21:41:52,954 | INFO     | did not find any defunct processes belonging to 3165996
[2024-05-18 23:42:06] 2024-05-18 21:41:52,963 | INFO     | did not find any defunct processes belonging to 3165996
[2024-05-18 23:42:06] 2024-05-18 21:41:52,963 | INFO     | ready for new job
[2024-05-18 23:42:06] 2024-05-18 21:41:52,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 23:42:06] 2024-05-18 21:41:52,965 | INFO     | *************************************
[2024-05-18 23:42:06] 2024-05-18 21:41:52,965 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 23:42:06] 2024-05-18 21:41:52,965 | INFO     | *************************************
[2024-05-18 23:42:06] 2024-05-18 21:41:52,965 | INFO     | 
[2024-05-18 23:42:06] 2024-05-18 21:41:52,970 | INFO     | architecture information:
[2024-05-18 23:42:06] 2024-05-18 21:41:52,970 | INFO     | executing command: cat /etc/os-release
[2024-05-18 23:42:06] 2024-05-18 21:41:52,984 | INFO     | cat /etc/os-release:
[2024-05-18 23:42:06] NAME="CentOS Linux"
[2024-05-18 23:42:06] VERSION="7 (Core)"
[2024-05-18 23:42:06] ID="centos"
[2024-05-18 23:42:06] ID_LIKE="rhel fedora"
[2024-05-18 23:42:06] VERSION_ID="7"
[2024-05-18 23:42:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 23:42:06] ANSI_COLOR="0;31"
[2024-05-18 23:42:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 23:42:06] HOME_URL="https://www.centos.org/"
[2024-05-18 23:42:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 23:42:06] 
[2024-05-18 23:42:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 23:42:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 23:42:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 23:42:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 23:42:06] 
[2024-05-18 23:42:06] 2024-05-18 21:41:52,984 | INFO     | *************************************
[2024-05-18 23:42:06] 2024-05-18 21:41:53,362 | INFO     | 8423s have passed since pilot start
[2024-05-18 23:42:06] 2024-05-18 21:41:53,486 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-05-18 23:42:06] 2024-05-18 21:41:53,506 | INFO     | sufficient remaining disk space (2974487150592 B)
[2024-05-18 23:42:06] 2024-05-18 21:41:53,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 23:42:06] 2024-05-18 21:41:53,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 23:42:06] 2024-05-18 21:41:53,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 23:42:06] 2024-05-18 21:41:53,807 | INFO     | all data control threads have been joined
[2024-05-18 23:42:06] 2024-05-18 21:41:53,917 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 23:42:06] 2024-05-18 21:41:53,917 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 23:42:06] 2024-05-18 21:41:53,917 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:42:06] 2024-05-18 21:41:53,917 | INFO     | will abort loop
[2024-05-18 23:42:06] 2024-05-18 21:41:54,094 | INFO     | all job control threads have been joined
[2024-05-18 23:42:06] 2024-05-18 21:41:54,368 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 23:42:06] 2024-05-18 21:41:54,368 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 23:42:06] 2024-05-18 21:41:54,368 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 23:42:06] 2024-05-18 21:41:54,396 | INFO     | all payload control threads have been joined
[2024-05-18 23:42:06] 2024-05-18 21:41:54,512 | INFO     | [job] retrieve thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:54,529 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:54,648 | INFO     | [job] validate thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:54,706 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:54,812 | INFO     | [data] control thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:54,923 | INFO     | [job] job monitor thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:55,018 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:55,100 | INFO     | [job] control thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:55,339 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:55,401 | INFO     | [payload] control thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:55,450 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:42:06] 2024-05-18 21:41:55,513 | INFO     | [data] copytool_out thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:55,598 | INFO     | [payload] failed_post thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:55,852 | INFO     | [data] copytool_in thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:55,942 | INFO     | [payload] validate_post thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:41:56,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 23:42:06] 2024-05-18 21:41:56,451 | INFO     | [job] queue monitor thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:42:00,238 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 23:42:06] 2024-05-18 21:42:00,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47454524916800)>', '<ExcThread(monitor, started 47454967838464)>']
[2024-05-18 23:42:06] 2024-05-18 21:42:01,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 23:42:06] 2024-05-18 21:42:01,400 | INFO     | [monitor] control thread has ended
[2024-05-18 23:42:06] 2024-05-18 21:42:05,683 | INFO     | all workflow threads have been joined
[2024-05-18 23:42:06] 2024-05-18 21:42:05,683 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 23:42:06] 2024-05-18 21:42:05,684 | INFO     | traces error code: 0
[2024-05-18 23:42:06] 2024-05-18 21:42:05,684 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 23:42:06] 2024-05-18 21:42:05,751 [wrapper] ==== pilot stdout END ====
[2024-05-18 23:42:06] 2024-05-18 21:42:05,753 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 23:42:06] 2024-05-18 21:42:05,756 [wrapper] pilotpid: 3158289
[2024-05-18 23:42:06] 2024-05-18 21:42:05,758 [wrapper] Pilot exit status: 0
[2024-05-18 23:42:06] 2024-05-18 21:42:05,766 [wrapper] pandaids: 6207355418
[2024-05-18 23:42:06] 2024-05-18 21:42:05,857 [wrapper] cleanup: SIGTERM to supervisor_pilot 3748938 3158290
[2024-05-18 23:42:06] 2024-05-18 21:42:05,860 [wrapper] Test setup, not cleaning
[2024-05-18 23:42:06] 2024-05-18 21:42:05,862 [wrapper] ==== wrapper stdout END ====
[2024-05-18 23:42:06] 2024-05-18 21:42:05,864 [wrapper] ==== wrapper stderr END ====
[2024-05-18 23:42:06] 2024-05-18 21:42:05,870 [wrapper] apfmon messages muted
[2024-05-18 23:42:06]  *** Error codes and diagnostics ***
[2024-05-18 23:42:06]     "exeErrorCode": 0,
[2024-05-18 23:42:06]     "exeErrorDiag": "",
[2024-05-18 23:42:06]     "pilotErrorCode": 0,
[2024-05-18 23:42:06]     "pilotErrorDiag": "",
[2024-05-18 23:42:06]  *** Listing of results directory ***
[2024-05-18 23:42:06] total 827716
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc    467845 May 16 15:54 pilot3.tar.gz
[2024-05-18 23:42:06] -rwx------ 1 boinc boinc     32251 May 16 15:57 runpilot2-wrapper.sh
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc      5633 May 16 15:57 queuedata.json
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc       100 May 18 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 23:42:06] -rwxr-xr-x 1 boinc boinc      7986 May 18 21:21 run_atlas
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc       105 May 18 21:21 job.xml
[2024-05-18 23:42:06] -rw-r--r-- 2 boinc boinc 603998220 May 18 21:21 EVNT.38776100._000019.pool.root.1
[2024-05-18 23:42:06] -rw-r--r-- 2 boinc boinc     17537 May 18 21:21 start_atlas.sh
[2024-05-18 23:42:06] drwxrwx--x 2 boinc boinc      4096 May 18 21:21 shared
[2024-05-18 23:42:06] -rw-r--r-- 2 boinc boinc    479997 May 18 21:21 input.tar.gz
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc      6646 May 18 21:21 init_data.xml
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc         0 May 18 21:21 boinc_lockfile
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc      2638 May 18 21:21 pandaJob.out
[2024-05-18 23:42:06] -rw------- 1 boinc boinc       424 May 18 21:21 setup.sh.local
[2024-05-18 23:42:06] -rw------- 1 boinc boinc   1019083 May 18 21:21 agis_schedconf.cvmfs.json
[2024-05-18 23:42:06] -rw------- 1 boinc boinc         0 May 18 21:21 agis_ddmendpoints.agis.ALL.json
[2024-05-18 23:42:06] -rw------- 1 boinc boinc   1324701 May 18 21:21 cric_ddmendpoints.json
[2024-05-18 23:42:06] drwx------ 4 boinc boinc      4096 May 18 21:21 pilot3
[2024-05-18 23:42:06] -rw------- 1 boinc boinc 237772683 May 18 23:41 HITS.38776104._009968.pool.root.1
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc       530 May 18 23:41 boinc_task_state.xml
[2024-05-18 23:42:06] -rw------- 1 boinc boinc      1035 May 18 23:41 memory_monitor_summary.json
[2024-05-18 23:42:06] -rw------- 1 boinc boinc    276613 May 18 23:41 log.38776104._009968.job.log.tgz.1
[2024-05-18 23:42:06] -rw------- 1 boinc boinc      7708 May 18 23:41 heartbeat.json
[2024-05-18 23:42:06] -rw------- 1 boinc boinc        95 May 18 23:41 pilot_heartbeat.json
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc      8192 May 18 23:42 boinc_mmap_file
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc        27 May 18 23:42 wrapper_checkpoint.txt
[2024-05-18 23:42:06] -rw------- 1 boinc boinc      4482 May 18 23:42 pilotlog.txt
[2024-05-18 23:42:06] -rw------- 1 boinc boinc    862757 May 18 23:42 log.38776104._009968.job.log.1
[2024-05-18 23:42:06] -rw------- 1 boinc boinc       357 May 18 23:42 output.list
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc       620 May 18 23:42 runtime_log
[2024-05-18 23:42:06] -rw------- 1 boinc boinc   1157120 May 18 23:42 result.tar.gz
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc     11428 May 18 23:42 runtime_log.err
[2024-05-18 23:42:06] -rw------- 1 boinc boinc       652 May 18 23:42 qIWLDmumqR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmXaPKDmLbVvGo.diag
[2024-05-18 23:42:06] -rw-r--r-- 1 boinc boinc     21300 May 18 23:42 stderr.txt
[2024-05-18 23:42:06] HITS file was successfully produced:
[2024-05-18 23:42:06] -rw------- 1 boinc boinc 237772683 May 18 23:41 shared/HITS.pool.root.1
[2024-05-18 23:42:06]  *** Contents of shared directory: ***
[2024-05-18 23:42:06] total 823676
[2024-05-18 23:42:06] -rw-r--r-- 2 boinc boinc 603998220 May 18 21:21 ATLAS.root_0
[2024-05-18 23:42:06] -rw-r--r-- 2 boinc boinc     17537 May 18 21:21 start_atlas.sh
[2024-05-18 23:42:06] -rw-r--r-- 2 boinc boinc    479997 May 18 21:21 input.tar.gz
[2024-05-18 23:42:06] -rw------- 1 boinc boinc 237772683 May 18 23:41 HITS.pool.root.1
[2024-05-18 23:42:06] -rw------- 1 boinc boinc   1157120 May 18 23:42 result.tar.gz
23:42:07 (3153712): run_atlas exited; CPU time 30621.026830
23:42:07 (3153712): called boinc_finish(0)

</stderr_txt>
]]>

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