Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:54:35 (3657604): wrapper (7.7.26015): starting
18:54:35 (3657604): wrapper: running run_atlas (--nthreads 4)
[2024-05-23 18:54:35] Arguments: --nthreads 4
[2024-05-23 18:54:35] Threads: 4
[2024-05-23 18:54:35] Checking for CVMFS
[2024-05-23 18:54:35] No cvmfs_config command found, will try listing directly
[2024-05-23 18:54:35] CVMFS is ok
[2024-05-23 18:54:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-23 18:54:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-23 18:54:35] Further information can be found at the LHC@home message board.
[2024-05-23 18:54:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-23 18:54:35] Checking for apptainer binary...
[2024-05-23 18:54:35] which: no apptainer in ((null))
[2024-05-23 18:54:35] apptainer is not installed, using version from CVMFS
[2024-05-23 18:54:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-23 18:54:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-05-23 18:54:36] apptainer works
[2024-05-23 18:54:36] Set ATHENA_PROC_NUMBER=4
[2024-05-23 18:54:36] Set ATHENA_CORE_NUMBER=4
[2024-05-23 18:54:36] Starting ATLAS job with PandaID=6207333853
[2024-05-23 18:54:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-23 22:04:09]  *** The last 200 lines of the pilot log: ***
[2024-05-23 22:04:09] 2024-05-23 20:03:52,310 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-23 22:04:09] 2024-05-23 20:03:52,310 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-23 22:04:09] 2024-05-23 20:03:52,312 | INFO     | fitting pss+swap vs Time
[2024-05-23 22:04:09] 2024-05-23 20:03:52,312 | INFO     | model: linear, x: [1716483312.0, 1716483373.0, 1716483434.0, 1716483495.0, 1716483556.0, 1716483617.0, 1716483678.0, 1716483739.0, 1716483800.0, 1716483861.0, 1716
[2024-05-23 22:04:09] 2024-05-23 20:03:52,313 | INFO     | sum of square deviations: 1995283922.5
[2024-05-23 22:04:09] 2024-05-23 20:03:52,313 | INFO     | sum of deviations: 70738925506.5
[2024-05-23 22:04:09] 2024-05-23 20:03:52,313 | INFO     | mean x: 1716488954.5
[2024-05-23 22:04:09] 2024-05-23 20:03:52,313 | INFO     | mean y: 2246440.8225806453
[2024-05-23 22:04:09] 2024-05-23 20:03:52,313 | INFO     | -- intersect: -60852543654.89903
[2024-05-23 22:04:09] 2024-05-23 20:03:52,313 | INFO     | intersect: -60852543654.89903
[2024-05-23 22:04:09] 2024-05-23 20:03:52,314 | INFO     | chi2: 4.823520900913211
[2024-05-23 22:04:09] 2024-05-23 20:03:52,314 | INFO     | model: linear, x: [1716483312.0, 1716483373.0, 1716483434.0, 1716483495.0, 1716483556.0, 1716483617.0, 1716483678.0, 1716483739.0, 1716483800.0, 1716483861.0, 1716
[2024-05-23 22:04:09] 2024-05-23 20:03:52,314 | INFO     | sum of square deviations: 1838657730.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,314 | INFO     | sum of deviations: 80632923810.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,314 | INFO     | mean x: 1716488802.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,315 | INFO     | mean y: 2255817.856353591
[2024-05-23 22:04:09] 2024-05-23 20:03:52,315 | INFO     | -- intersect: -75273043404.02992
[2024-05-23 22:04:09] 2024-05-23 20:03:52,315 | INFO     | intersect: -75273043404.02992
[2024-05-23 22:04:09] 2024-05-23 20:03:52,315 | INFO     | chi2: 3.984557505683473
[2024-05-23 22:04:09] 2024-05-23 20:03:52,315 | INFO     | current chi2=3.984557505683473 (change=17.39317424893715 %)
[2024-05-23 22:04:09] 2024-05-23 20:03:52,315 | INFO     | right removable region: 180
[2024-05-23 22:04:09] 2024-05-23 20:03:52,315 | INFO     | model: linear, x: [1716483617.0, 1716483678.0, 1716483739.0, 1716483800.0, 1716483861.0, 1716483922.0, 1716483983.0, 1716484044.0, 1716484105.0, 1716484166.0, 1716
[2024-05-23 22:04:09] 2024-05-23 20:03:52,315 | INFO     | sum of square deviations: 1838657730.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,316 | INFO     | sum of deviations: 29754181304.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,316 | INFO     | mean x: 1716489107.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,316 | INFO     | mean y: 2286213.143646409
[2024-05-23 22:04:09] 2024-05-23 20:03:52,316 | INFO     | -- intersect: -27774894532.73615
[2024-05-23 22:04:09] 2024-05-23 20:03:52,316 | INFO     | intersect: -27774894532.73615
[2024-05-23 22:04:09] 2024-05-23 20:03:52,316 | INFO     | chi2: 2.471964401802652
[2024-05-23 22:04:09] 2024-05-23 20:03:52,316 | INFO     | current chi2=2.471964401802652 (change=48.75186709910082 %)
[2024-05-23 22:04:09] 2024-05-23 20:03:52,316 | INFO     | model: linear, x: [1716483922.0, 1716483983.0, 1716484044.0, 1716484105.0, 1716484166.0, 1716484227.0, 1716484288.0, 1716484349.0, 1716484410.0, 1716484471.0, 1716
[2024-05-23 22:04:09] 2024-05-23 20:03:52,316 | INFO     | sum of square deviations: 1690450300.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,317 | INFO     | sum of deviations: -2464197754.5
[2024-05-23 22:04:09] 2024-05-23 20:03:52,317 | INFO     | mean x: 1716489259.5
[2024-05-23 22:04:09] 2024-05-23 20:03:52,317 | INFO     | mean y: 2319369.039772727
[2024-05-23 22:04:09] 2024-05-23 20:03:52,317 | INFO     | -- intersect: 2504474551.5276976
[2024-05-23 22:04:09] 2024-05-23 20:03:52,317 | INFO     | intersect: 2504474551.5276976
[2024-05-23 22:04:09] 2024-05-23 20:03:52,317 | INFO     | chi2: 1.148909463523305
[2024-05-23 22:04:09] 2024-05-23 20:03:52,317 | INFO     | current chi2=1.148909463523305 (change=53.52241065099983 %)
[2024-05-23 22:04:09] 2024-05-23 20:03:52,318 | INFO     | model: linear, x: [1716484227.0, 1716484288.0, 1716484349.0, 1716484410.0, 1716484471.0, 1716484532.0, 1716484593.0, 1716484654.0, 1716484715.0, 1716484776.0, 1716
[2024-05-23 22:04:09] 2024-05-23 20:03:52,318 | INFO     | sum of square deviations: 1550429070.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,318 | INFO     | sum of deviations: -9956397613.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,318 | INFO     | mean x: 1716489412.0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,318 | INFO     | mean y: 2327342.3625730993
[2024-05-23 22:04:09] 2024-05-23 20:03:52,318 | INFO     | -- intersect: 11025115430.550686
[2024-05-23 22:04:09] 2024-05-23 20:03:52,318 | INFO     | intersect: 11025115430.550686
[2024-05-23 22:04:09] 2024-05-23 20:03:52,319 | INFO     | chi2: 0.8894949958126622
[2024-05-23 22:04:09] 2024-05-23 20:03:52,319 | INFO     | current chi2=0.8894949958126622 (change=22.57919148085951 %)
[2024-05-23 22:04:09] 2024-05-23 20:03:52,319 | INFO     | left removable region: 30
[2024-05-23 22:04:09] 2024-05-23 20:03:52,319 | INFO     | model: linear, x: [1716485142.0, 1716485203.0, 1716485264.0, 1716485325.0, 1716485386.0, 1716485447.0, 1716485508.0, 1716485569.0, 1716485630.0, 1716485691.0, 1716
[2024-05-23 22:04:09] 2024-05-23 20:03:52,319 | INFO     | sum of square deviations: 1046484737.5
[2024-05-23 22:04:09] 2024-05-23 20:03:52,319 | INFO     | sum of deviations: 1443043175.4999998
[2024-05-23 22:04:09] 2024-05-23 20:03:52,319 | INFO     | mean x: 1716489686.5
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | mean y: 2339943.2733333334
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | -- intersect: -2364602104.8613715
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | intersect: -2364602104.8613715
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | chi2: 0.0006146558824455969
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | -- intersect: -2364602104.8613715
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | current memory leak: 1.38 B/s (using 150 data points, chi2=0.00)
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | ..............................
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | . Timing measurements:
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | . get job = 0 s
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | . initial setup = 1 s
[2024-05-23 22:04:09] 2024-05-23 20:03:52,320 | INFO     | . payload setup = 5 s
[2024-05-23 22:04:09] 2024-05-23 20:03:52,321 | INFO     | . stage-in = 0 s
[2024-05-23 22:04:09] 2024-05-23 20:03:52,321 | INFO     | . payload execution = 11314 s
[2024-05-23 22:04:09] 2024-05-23 20:03:52,321 | INFO     | . stage-out = 0 s
[2024-05-23 22:04:09] 2024-05-23 20:03:52,321 | INFO     | . log creation = 0 s
[2024-05-23 22:04:09] 2024-05-23 20:03:52,321 | INFO     | ..............................
[2024-05-23 22:04:09] 2024-05-23 20:03:52,379 | INFO     | 
[2024-05-23 22:04:09] 2024-05-23 20:03:52,379 | INFO     | job summary report
[2024-05-23 22:04:09] 2024-05-23 20:03:52,379 | INFO     | --------------------------------------------------
[2024-05-23 22:04:09] 2024-05-23 20:03:52,379 | INFO     | PanDA job id: 6207333853
[2024-05-23 22:04:09] 2024-05-23 20:03:52,380 | INFO     | task id: 38776104
[2024-05-23 22:04:09] 2024-05-23 20:03:52,380 | INFO     | errors: (none)
[2024-05-23 22:04:09] 2024-05-23 20:03:52,380 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-23 22:04:09] 2024-05-23 20:03:52,380 | INFO     | pilot state: finished 
[2024-05-23 22:04:09] 2024-05-23 20:03:52,380 | INFO     | transexitcode: 0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,380 | INFO     | exeerrorcode: 0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,380 | INFO     | exeerrordiag: 
[2024-05-23 22:04:09] 2024-05-23 20:03:52,380 | INFO     | exitcode: 0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,380 | INFO     | exitmsg: OK
[2024-05-23 22:04:09] 2024-05-23 20:03:52,381 | INFO     | cpuconsumptiontime: 42471 s
[2024-05-23 22:04:09] 2024-05-23 20:03:52,381 | INFO     | nevents: 400
[2024-05-23 22:04:09] 2024-05-23 20:03:52,381 | INFO     | neventsw: 0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,381 | INFO     | pid: 3684207
[2024-05-23 22:04:09] 2024-05-23 20:03:52,381 | INFO     | pgrp: 3684207
[2024-05-23 22:04:09] 2024-05-23 20:03:52,381 | INFO     | corecount: 4
[2024-05-23 22:04:09] 2024-05-23 20:03:52,381 | INFO     | event service: False
[2024-05-23 22:04:09] 2024-05-23 20:03:52,381 | INFO     | sizes: {0: 2378739, 5: 2378945, 11: 2379001, 11323: 2408194, 11324: 2408193, 11326: 2417415, 11330: 2417529}
[2024-05-23 22:04:09] 2024-05-23 20:03:52,382 | INFO     | --------------------------------------------------
[2024-05-23 22:04:09] 2024-05-23 20:03:52,382 | INFO     | 
[2024-05-23 22:04:09] 2024-05-23 20:03:52,382 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | job 6207333853 has completed (purged errors)
[2024-05-23 22:04:09] 2024-05-23 20:03:52,403 | INFO     | overall cleanup function is called
[2024-05-23 22:04:09] 2024-05-23 20:03:53,410 | INFO     | --- collectZombieJob: --- 10, [3684207]
[2024-05-23 22:04:09] 2024-05-23 20:03:53,410 | INFO     | zombie collector waiting for pid 3684207
[2024-05-23 22:04:09] 2024-05-23 20:03:53,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-23 22:04:09] 2024-05-23 20:03:54,415 | INFO     | collected zombie processes
[2024-05-23 22:04:09] 2024-05-23 20:03:54,415 | INFO     | will now attempt to kill all subprocesses of pid=3684207
[2024-05-23 22:04:09] 2024-05-23 20:03:54,584 | INFO     | process IDs to be killed: [3684207] (in reverse order)
[2024-05-23 22:04:09] 2024-05-23 20:03:54,691 | WARNING  | found no corresponding commands to process id(s)
[2024-05-23 22:04:09] 2024-05-23 20:03:54,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-23 22:04:09] 2024-05-23 20:03:54,699 | INFO     | did not find any defunct processes belonging to 3684207
[2024-05-23 22:04:09] 2024-05-23 20:03:54,706 | INFO     | did not find any defunct processes belonging to 3684207
[2024-05-23 22:04:09] 2024-05-23 20:03:54,706 | INFO     | ready for new job
[2024-05-23 22:04:09] 2024-05-23 20:03:54,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-23 22:04:09] 2024-05-23 20:03:54,708 | INFO     | *************************************
[2024-05-23 22:04:09] 2024-05-23 20:03:54,708 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-23 22:04:09] 2024-05-23 20:03:54,708 | INFO     | *************************************
[2024-05-23 22:04:09] 2024-05-23 20:03:54,708 | INFO     | 
[2024-05-23 22:04:09] 2024-05-23 20:03:54,710 | INFO     | architecture information:
[2024-05-23 22:04:09] 2024-05-23 20:03:54,711 | INFO     | executing command: cat /etc/os-release
[2024-05-23 22:04:09] 2024-05-23 20:03:54,723 | INFO     | cat /etc/os-release:
[2024-05-23 22:04:09] NAME="CentOS Linux"
[2024-05-23 22:04:09] VERSION="7 (Core)"
[2024-05-23 22:04:09] ID="centos"
[2024-05-23 22:04:09] ID_LIKE="rhel fedora"
[2024-05-23 22:04:09] VERSION_ID="7"
[2024-05-23 22:04:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-23 22:04:09] ANSI_COLOR="0;31"
[2024-05-23 22:04:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-23 22:04:09] HOME_URL="https://www.centos.org/"
[2024-05-23 22:04:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-23 22:04:09] 
[2024-05-23 22:04:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-23 22:04:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-23 22:04:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-23 22:04:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-23 22:04:09] 
[2024-05-23 22:04:09] 2024-05-23 20:03:54,724 | INFO     | *************************************
[2024-05-23 22:04:09] 2024-05-23 20:03:55,226 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-05-23 22:04:09] 2024-05-23 20:03:55,249 | INFO     | sufficient remaining disk space (637351755776 B)
[2024-05-23 22:04:09] 2024-05-23 20:03:55,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-23 22:04:09] 2024-05-23 20:03:55,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-23 22:04:09] 2024-05-23 20:03:55,250 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-23 22:04:09] 2024-05-23 20:03:55,250 | INFO     | found 0 job(s) in 20 queues
[2024-05-23 22:04:09] 2024-05-23 20:03:55,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-23 22:04:09] 2024-05-23 20:03:55,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-23 22:04:09] 2024-05-23 20:03:55,588 | INFO     | all data control threads have been joined
[2024-05-23 22:04:09] 2024-05-23 20:03:55,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-23 22:04:09] 2024-05-23 20:03:55,886 | INFO     | aborting loop
[2024-05-23 22:04:09] 2024-05-23 20:03:55,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-23 22:04:09] 2024-05-23 20:03:56,255 | INFO     | [job] retrieve thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:56,255 | INFO     | [payload] failed_post thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:56,287 | INFO     | all payload control threads have been joined
[2024-05-23 22:04:09] 2024-05-23 20:03:56,547 | INFO     | [payload] validate_post thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:56,593 | INFO     | [data] control thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:56,682 | INFO     | [job] validate thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:56,695 | INFO     | all job control threads have been joined
[2024-05-23 22:04:09] 2024-05-23 20:03:56,703 | INFO     | [data] copytool_in thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:56,891 | INFO     | [job] job monitor thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:56,935 | INFO     | [payload] execute_payloads thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:57,293 | INFO     | [payload] control thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:57,350 | INFO     | [job] create_data_payload thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:57,388 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-23 22:04:09] 2024-05-23 20:03:57,585 | INFO     | [payload] validate_pre thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:57,633 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:57,700 | INFO     | [job] control thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:57,945 | INFO     | [data] copytool_out thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:58,394 | INFO     | [job] queue monitor thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:03:58,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-23 22:04:09] 2024-05-23 20:04:02,519 | INFO     | [data] queue_monitor thread has finished
[2024-05-23 22:04:09] 2024-05-23 20:04:03,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47392613995584)>', '<ExcThread(monitor, started 47392791549696)>']
[2024-05-23 22:04:09] 2024-05-23 20:04:03,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-23 22:04:09] 2024-05-23 20:04:03,291 | INFO     | [monitor] control thread has ended
[2024-05-23 22:04:09] 2024-05-23 20:04:08,216 | INFO     | all workflow threads have been joined
[2024-05-23 22:04:09] 2024-05-23 20:04:08,216 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-23 22:04:09] 2024-05-23 20:04:08,216 | INFO     | traces error code: 0
[2024-05-23 22:04:09] 2024-05-23 20:04:08,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-23 22:04:09] 2024-05-23 20:04:08,296 [wrapper] ==== pilot stdout END ====
[2024-05-23 22:04:09] 2024-05-23 20:04:08,298 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-23 22:04:09] 2024-05-23 20:04:08,300 [wrapper] pilotpid: 3665428
[2024-05-23 22:04:09] 2024-05-23 20:04:08,302 [wrapper] Pilot exit status: 0
[2024-05-23 22:04:09] 2024-05-23 20:04:08,310 [wrapper] pandaids: 6207333853
[2024-05-23 22:04:09] 2024-05-23 20:04:08,399 [wrapper] cleanup: SIGTERM to supervisor_pilot 4169376 3665429
[2024-05-23 22:04:09] 2024-05-23 20:04:08,402 [wrapper] Test setup, not cleaning
[2024-05-23 22:04:09] 2024-05-23 20:04:08,404 [wrapper] ==== wrapper stdout END ====
[2024-05-23 22:04:09] 2024-05-23 20:04:08,406 [wrapper] ==== wrapper stderr END ====
[2024-05-23 22:04:09] 2024-05-23 20:04:08,411 [wrapper] apfmon messages muted
[2024-05-23 22:04:09]  *** Error codes and diagnostics ***
[2024-05-23 22:04:09]     "exeErrorCode": 0,
[2024-05-23 22:04:09]     "exeErrorDiag": "",
[2024-05-23 22:04:09]     "pilotErrorCode": 0,
[2024-05-23 22:04:09]     "pilotErrorDiag": "",
[2024-05-23 22:04:09]  *** Listing of results directory ***
[2024-05-23 22:04:09] total 818360
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc    467845 May 16 14:44 pilot3.tar.gz
[2024-05-23 22:04:09] -rwx------ 1 boinc boinc     32251 May 16 15:20 runpilot2-wrapper.sh
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc      5633 May 16 15:20 queuedata.json
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc       100 May 23 18:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-23 22:04:09] -rwxr-xr-x 1 boinc boinc      7986 May 23 18:45 run_atlas
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc       105 May 23 18:45 job.xml
[2024-05-23 22:04:09] -rw-r--r-- 2 boinc boinc 598581468 May 23 18:54 EVNT.38776100._000388.pool.root.1
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc      6663 May 23 18:54 init_data.xml
[2024-05-23 22:04:09] -rw-r--r-- 2 boinc boinc     17537 May 23 18:54 start_atlas.sh
[2024-05-23 22:04:09] drwxrwx--x 2 boinc boinc      4096 May 23 18:54 shared
[2024-05-23 22:04:09] -rw-r--r-- 2 boinc boinc    480003 May 23 18:54 input.tar.gz
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc         0 May 23 18:54 boinc_lockfile
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc      2640 May 23 18:54 pandaJob.out
[2024-05-23 22:04:09] -rw------- 1 boinc boinc       424 May 23 18:54 setup.sh.local
[2024-05-23 22:04:09] -rw------- 1 boinc boinc   1009177 May 23 18:54 agis_schedconf.cvmfs.json
[2024-05-23 22:04:09] -rw------- 1 boinc boinc   1317222 May 23 18:54 cric_ddmendpoints.json
[2024-05-23 22:04:09] drwx------ 4 boinc boinc      4096 May 23 18:54 pilot3
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc       530 May 23 22:03 boinc_task_state.xml
[2024-05-23 22:04:09] -rw------- 1 boinc boinc 232766668 May 23 22:03 HITS.38776104._009861.pool.root.1
[2024-05-23 22:04:09] -rw------- 1 boinc boinc        95 May 23 22:03 pilot_heartbeat.json
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc        27 May 23 22:03 wrapper_checkpoint.txt
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc      8192 May 23 22:03 boinc_mmap_file
[2024-05-23 22:04:09] -rw------- 1 boinc boinc      1063 May 23 22:03 memory_monitor_summary.json
[2024-05-23 22:04:09] -rw------- 1 boinc boinc         0 May 23 22:03 agis_ddmendpoints.agis.ALL.json
[2024-05-23 22:04:09] -rw------- 1 boinc boinc    328005 May 23 22:03 log.38776104._009861.job.log.tgz.1
[2024-05-23 22:04:09] -rw------- 1 boinc boinc      7766 May 23 22:03 heartbeat.json
[2024-05-23 22:04:09] -rw------- 1 boinc boinc      4344 May 23 22:04 pilotlog.txt
[2024-05-23 22:04:09] -rw------- 1 boinc boinc   1235246 May 23 22:04 log.38776104._009861.job.log.1
[2024-05-23 22:04:09] -rw------- 1 boinc boinc       357 May 23 22:04 output.list
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc       620 May 23 22:04 runtime_log
[2024-05-23 22:04:09] -rw------- 1 boinc boinc   1587200 May 23 22:04 result.tar.gz
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc     11410 May 23 22:04 runtime_log.err
[2024-05-23 22:04:09] -rw------- 1 boinc boinc       657 May 23 22:04 Ck1MDmtCqR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmhZPKDm1sbWdm.diag
[2024-05-23 22:04:09] -rw-r--r-- 1 boinc boinc     21317 May 23 22:04 stderr.txt
[2024-05-23 22:04:09] HITS file was successfully produced:
[2024-05-23 22:04:09] -rw------- 1 boinc boinc 232766668 May 23 22:03 shared/HITS.pool.root.1
[2024-05-23 22:04:09]  *** Contents of shared directory: ***
[2024-05-23 22:04:09] total 813920
[2024-05-23 22:04:09] -rw-r--r-- 2 boinc boinc 598581468 May 23 18:54 ATLAS.root_0
[2024-05-23 22:04:09] -rw-r--r-- 2 boinc boinc     17537 May 23 18:54 start_atlas.sh
[2024-05-23 22:04:09] -rw-r--r-- 2 boinc boinc    480003 May 23 18:54 input.tar.gz
[2024-05-23 22:04:09] -rw------- 1 boinc boinc 232766668 May 23 22:03 HITS.pool.root.1
[2024-05-23 22:04:09] -rw------- 1 boinc boinc   1587200 May 23 22:04 result.tar.gz
22:04:10 (3657604): run_atlas exited; CPU time 42205.525934
22:04:10 (3657604): called boinc_finish(0)

</stderr_txt>
]]>

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