Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:59:26 (1106103): wrapper (7.7.26015): starting
08:59:26 (1106103): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 08:59:26] Arguments: --nthreads 4
[2024-05-19 08:59:26] Threads: 4
[2024-05-19 08:59:26] Checking for CVMFS
[2024-05-19 08:59:26] No cvmfs_config command found, will try listing directly
[2024-05-19 08:59:26] CVMFS is ok
[2024-05-19 08:59:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 08:59:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 08:59:26] Further information can be found at the LHC@home message board.
[2024-05-19 08:59:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 08:59:26] Checking for apptainer binary...
[2024-05-19 08:59:26] which: no apptainer in ((null))
[2024-05-19 08:59:26] apptainer is not installed, using version from CVMFS
[2024-05-19 08:59:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 08:59:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2024-05-19 08:59:27] apptainer works
[2024-05-19 08:59:27] Set ATHENA_PROC_NUMBER=4
[2024-05-19 08:59:27] Set ATHENA_CORE_NUMBER=4
[2024-05-19 08:59:27] Starting ATLAS job with PandaID=6207333837
[2024-05-19 08:59:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 11:18:39]  *** The last 200 lines of the pilot log: ***
[2024-05-19 11:18:39] 2024-05-19 09:18:25,398 | INFO     | -- intersect: -4792552619.957142
[2024-05-19 11:18:39] 2024-05-19 09:18:25,398 | INFO     | intersect: -4792552619.957142
[2024-05-19 11:18:39] 2024-05-19 09:18:25,398 | INFO     | chi2: 0.000519225463729535
[2024-05-19 11:18:39] 2024-05-19 09:18:25,398 | INFO     | current chi2=0.000519225463729535 (change=98.85452143043622 %)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,398 | INFO     | model: linear, x: [1716103219.0, 1716103280.0, 1716103341.0, 1716103402.0, 1716103463.0, 1716103524.0, 1716103585.0, 1716103646.0, 1716103707.0, 1716103768.0, 1716
[2024-05-19 11:18:39] 2024-05-19 09:18:25,399 | INFO     | sum of square deviations: 483971865.0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,399 | INFO     | sum of deviations: 1016523245.5
[2024-05-19 11:18:39] 2024-05-19 09:18:25,399 | INFO     | mean x: 1716106726.5
[2024-05-19 11:18:39] 2024-05-19 09:18:25,399 | INFO     | mean y: 2339335.6810344825
[2024-05-19 11:18:39] 2024-05-19 09:18:25,399 | INFO     | -- intersect: -3602131306.9381614
[2024-05-19 11:18:39] 2024-05-19 09:18:25,399 | INFO     | intersect: -3602131306.9381614
[2024-05-19 11:18:39] 2024-05-19 09:18:25,400 | INFO     | chi2: 0.0001231808872678464
[2024-05-19 11:18:39] 2024-05-19 09:18:25,400 | INFO     | current chi2=0.0001231808872678464 (change=76.2760311516595 %)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,400 | INFO     | model: linear, x: [1716103524.0, 1716103585.0, 1716103646.0, 1716103707.0, 1716103768.0, 1716103829.0, 1716103890.0, 1716103951.0, 1716104012.0, 1716104073.0, 1716
[2024-05-19 11:18:39] 2024-05-19 09:18:25,400 | INFO     | sum of square deviations: 424045160.0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,401 | INFO     | sum of deviations: 778797858.0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,401 | INFO     | mean x: 1716106879.0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,401 | INFO     | mean y: 2339938.7477477477
[2024-05-19 11:18:39] 2024-05-19 09:18:25,401 | INFO     | -- intersect: -3149447860.137317
[2024-05-19 11:18:39] 2024-05-19 09:18:25,401 | INFO     | intersect: -3149447860.137317
[2024-05-19 11:18:39] 2024-05-19 09:18:25,401 | INFO     | chi2: 7.619485418063425e-05
[2024-05-19 11:18:39] 2024-05-19 09:18:25,401 | INFO     | current chi2=7.619485418063425e-05 (change=38.14393135929035 %)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,401 | INFO     | model: linear, x: [1716103829.0, 1716103890.0, 1716103951.0, 1716104012.0, 1716104073.0, 1716104134.0, 1716104195.0, 1716104256.0, 1716104317.0, 1716104378.0, 1716
[2024-05-19 11:18:39] 2024-05-19 09:18:25,401 | INFO     | sum of square deviations: 369281342.5
[2024-05-19 11:18:39] 2024-05-19 09:18:25,402 | INFO     | sum of deviations: 605363450.9999999
[2024-05-19 11:18:39] 2024-05-19 09:18:25,402 | INFO     | mean x: 1716107031.5
[2024-05-19 11:18:39] 2024-05-19 09:18:25,402 | INFO     | mean y: 2340421.0943396227
[2024-05-19 11:18:39] 2024-05-19 09:18:25,402 | INFO     | -- intersect: -2810876374.1034994
[2024-05-19 11:18:39] 2024-05-19 09:18:25,402 | INFO     | intersect: -2810876374.1034994
[2024-05-19 11:18:39] 2024-05-19 09:18:25,402 | INFO     | chi2: 5.5315313276115296e-05
[2024-05-19 11:18:39] 2024-05-19 09:18:25,402 | INFO     | current chi2=5.5315313276115296e-05 (change=27.402822840266968 %)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,402 | INFO     | model: linear, x: [1716104134.0, 1716104195.0, 1716104256.0, 1716104317.0, 1716104378.0, 1716104439.0, 1716104500.0, 1716104561.0, 1716104622.0, 1716104683.0, 1716
[2024-05-19 11:18:39] 2024-05-19 09:18:25,402 | INFO     | sum of square deviations: 319447850.0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | sum of deviations: 463128225.99999994
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | mean x: 1716107184.0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | mean y: 2340854.8514851485
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | -- intersect: -2485632301.8054633
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | intersect: -2485632301.8054633
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | chi2: 3.794587115791483e-05
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | current chi2=3.794587115791483e-05 (change=31.40078414000495 %)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | model: linear, x: [1716104439.0, 1716104500.0, 1716104561.0, 1716104622.0, 1716104683.0, 1716104744.0, 1716104805.0, 1716104866.0, 1716104927.0, 1716104988.0, 1716
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | sum of square deviations: 274312120.0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | sum of deviations: 396913275.0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | mean x: 1716107336.5
[2024-05-19 11:18:39] 2024-05-19 09:18:25,403 | INFO     | mean y: 2341077.2083333335
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | -- intersect: -2480763873.3922524
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | intersect: -2480763873.3922524
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | chi2: 3.613401013816711e-05
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | current chi2=3.613401013816711e-05 (change=4.774856827525489 %)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | left removable region: 80
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | model: linear, x: [1716106879.0, 1716106940.0, 1716107001.0, 1716107062.0, 1716107123.0, 1716107184.0, 1716107245.0, 1716107306.0, 1716107367.0, 1716107428.0, 1716
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | sum of square deviations: 38744912.5
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | sum of deviations: 1227015.0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | mean x: 1716108373.5
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | mean y: 2342930.84
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | -- intersect: -52004610.038046956
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | intersect: -52004610.038046956
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | chi2: 4.86847279566058e-07
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | -- intersect: -52004610.038046956
[2024-05-19 11:18:39] 2024-05-19 09:18:25,404 | INFO     | current memory leak: 0.03 B/s (using 50 data points, chi2=0.00)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | ..............................
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | . Timing measurements:
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | . get job = 0 s
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | . initial setup = 1 s
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | . payload setup = 5 s
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | . stage-in = 0 s
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | . payload execution = 8294 s
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | . stage-out = 1 s
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | . log creation = 0 s
[2024-05-19 11:18:39] 2024-05-19 09:18:25,405 | INFO     | ..............................
[2024-05-19 11:18:39] 2024-05-19 09:18:25,672 | INFO     | 
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | job summary report
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | --------------------------------------------------
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | PanDA job id: 6207333837
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | task id: 38776104
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | errors: (none)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | pilot state: finished 
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | transexitcode: 0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | exeerrorcode: 0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | exeerrordiag: 
[2024-05-19 11:18:39] 2024-05-19 09:18:25,673 | INFO     | exitcode: 0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | exitmsg: OK
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | cpuconsumptiontime: 29954 s
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | nevents: 400
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | neventsw: 0
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | pid: 1118246
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | pgrp: 1118246
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | corecount: 4
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | event service: False
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | sizes: {0: 2390641, 1: 2392189, 5: 2392395, 12: 2392451, 8302: 2420264, 8304: 2429248, 8308: 2429432, 8315: 2429602}
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | --------------------------------------------------
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | 
[2024-05-19 11:18:39] 2024-05-19 09:18:25,674 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/2
[2024-05-19 11:18:39] 2024-05-19 09:18:25,696 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,696 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,696 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,696 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,697 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,698 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,698 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 11:18:39] 2024-05-19 09:18:25,698 | INFO     | job 6207333837 has completed (purged errors)
[2024-05-19 11:18:39] 2024-05-19 09:18:25,698 | INFO     | overall cleanup function is called
[2024-05-19 11:18:39] 2024-05-19 09:18:26,704 | INFO     | --- collectZombieJob: --- 10, [1118246]
[2024-05-19 11:18:39] 2024-05-19 09:18:26,705 | INFO     | zombie collector waiting for pid 1118246
[2024-05-19 11:18:39] 2024-05-19 09:18:26,705 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 11:18:39] 2024-05-19 09:18:27,710 | INFO     | collected zombie processes
[2024-05-19 11:18:39] 2024-05-19 09:18:27,710 | INFO     | will now attempt to kill all subprocesses of pid=1118246
[2024-05-19 11:18:39] 2024-05-19 09:18:27,896 | INFO     | process IDs to be killed: [1118246] (in reverse order)
[2024-05-19 11:18:39] 2024-05-19 09:18:28,090 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 11:18:39] 2024-05-19 09:18:28,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 11:18:39] 2024-05-19 09:18:28,108 | INFO     | did not find any defunct processes belonging to 1118246
[2024-05-19 11:18:39] 2024-05-19 09:18:28,122 | INFO     | did not find any defunct processes belonging to 1118246
[2024-05-19 11:18:39] 2024-05-19 09:18:28,122 | INFO     | ready for new job
[2024-05-19 11:18:39] 2024-05-19 09:18:28,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 11:18:39] 2024-05-19 09:18:28,124 | INFO     | *************************************
[2024-05-19 11:18:39] 2024-05-19 09:18:28,124 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 11:18:39] 2024-05-19 09:18:28,124 | INFO     | *************************************
[2024-05-19 11:18:39] 2024-05-19 09:18:28,124 | INFO     | 
[2024-05-19 11:18:39] 2024-05-19 09:18:28,131 | INFO     | architecture information:
[2024-05-19 11:18:39] 2024-05-19 09:18:28,131 | INFO     | executing command: cat /etc/os-release
[2024-05-19 11:18:39] 2024-05-19 09:18:28,144 | INFO     | cat /etc/os-release:
[2024-05-19 11:18:39] NAME="CentOS Linux"
[2024-05-19 11:18:39] VERSION="7 (Core)"
[2024-05-19 11:18:39] ID="centos"
[2024-05-19 11:18:39] ID_LIKE="rhel fedora"
[2024-05-19 11:18:39] VERSION_ID="7"
[2024-05-19 11:18:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 11:18:39] ANSI_COLOR="0;31"
[2024-05-19 11:18:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 11:18:39] HOME_URL="https://www.centos.org/"
[2024-05-19 11:18:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 11:18:39] 
[2024-05-19 11:18:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 11:18:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 11:18:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 11:18:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 11:18:39] 
[2024-05-19 11:18:39] 2024-05-19 09:18:28,144 | INFO     | *************************************
[2024-05-19 11:18:39] 2024-05-19 09:18:28,647 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/2
[2024-05-19 11:18:39] 2024-05-19 09:18:28,676 | INFO     | sufficient remaining disk space (3118323466240 B)
[2024-05-19 11:18:39] 2024-05-19 09:18:28,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 11:18:39] 2024-05-19 09:18:28,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 11:18:39] 2024-05-19 09:18:28,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 11:18:39] 2024-05-19 09:18:28,732 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 11:18:39] 2024-05-19 09:18:28,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 11:18:39] 2024-05-19 09:18:28,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 11:18:39] 2024-05-19 09:18:29,057 | INFO     | all data control threads have been joined
[2024-05-19 11:18:39] 2024-05-19 09:18:29,142 | INFO     | all job control threads have been joined
[2024-05-19 11:18:39] 2024-05-19 09:18:29,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 11:18:39] 2024-05-19 09:18:29,576 | INFO     | aborting loop
[2024-05-19 11:18:39] 2024-05-19 09:18:29,682 | INFO     | [job] retrieve thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:29,697 | INFO     | all payload control threads have been joined
[2024-05-19 11:18:39] 2024-05-19 09:18:29,738 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:29,741 | INFO     | [job] validate thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:29,839 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:30,063 | INFO     | [data] control thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:30,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 11:18:39] 2024-05-19 09:18:30,146 | INFO     | [job] control thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:30,149 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:30,166 | INFO     | [payload] failed_post thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:30,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 11:18:39] 2024-05-19 09:18:30,581 | INFO     | [job] job monitor thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:30,701 | INFO     | [payload] control thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:30,786 | INFO     | [data] copytool_in thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:30,790 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:31,009 | INFO     | [payload] validate_post thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:31,481 | INFO     | [job] queue monitor thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:32,075 | INFO     | [data] copytool_out thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:32,683 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 11:18:39] 2024-05-19 09:18:33,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47821885764672)>', '<ExcThread(monitor, started 47822191744768)>']
[2024-05-19 11:18:39] 2024-05-19 09:18:33,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 11:18:39] 2024-05-19 09:18:33,757 | INFO     | [monitor] control thread has ended
[2024-05-19 11:18:39] 2024-05-19 09:18:38,628 | INFO     | all workflow threads have been joined
[2024-05-19 11:18:39] 2024-05-19 09:18:38,629 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 11:18:39] 2024-05-19 09:18:38,629 | INFO     | traces error code: 0
[2024-05-19 11:18:39] 2024-05-19 09:18:38,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 11:18:39] 2024-05-19 09:18:38,721 [wrapper] ==== pilot stdout END ====
[2024-05-19 11:18:39] 2024-05-19 09:18:38,723 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 11:18:39] 2024-05-19 09:18:38,725 [wrapper] pilotpid: 1110672
[2024-05-19 11:18:39] 2024-05-19 09:18:38,727 [wrapper] Pilot exit status: 0
[2024-05-19 11:18:39] 2024-05-19 09:18:38,741 [wrapper] pandaids: 6207333837
[2024-05-19 11:18:39] 2024-05-19 09:18:38,863 [wrapper] cleanup: SIGTERM to supervisor_pilot 1712062 1110673
[2024-05-19 11:18:39] 2024-05-19 09:18:38,865 [wrapper] Test setup, not cleaning
[2024-05-19 11:18:39] 2024-05-19 09:18:38,867 [wrapper] ==== wrapper stdout END ====
[2024-05-19 11:18:39] 2024-05-19 09:18:38,889 [wrapper] ==== wrapper stderr END ====
[2024-05-19 11:18:39] 2024-05-19 09:18:38,914 [wrapper] apfmon messages muted
[2024-05-19 11:18:39]  *** Error codes and diagnostics ***
[2024-05-19 11:18:39]     "exeErrorCode": 0,
[2024-05-19 11:18:39]     "exeErrorDiag": "",
[2024-05-19 11:18:39]     "pilotErrorCode": 0,
[2024-05-19 11:18:39]     "pilotErrorDiag": "",
[2024-05-19 11:18:39]  *** Listing of results directory ***
[2024-05-19 11:18:39] total 811020
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc    467845 May 16 14:44 pilot3.tar.gz
[2024-05-19 11:18:39] -rwx------ 1 boinc boinc     32251 May 16 15:08 runpilot2-wrapper.sh
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc      5633 May 16 15:08 queuedata.json
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc       100 May 19 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 11:18:39] -rwxr-xr-x 1 boinc boinc      7986 May 19 08:17 run_atlas
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc       105 May 19 08:17 job.xml
[2024-05-19 11:18:39] -rw-r--r-- 2 boinc boinc 598581468 May 19 08:59 EVNT.38776100._000388.pool.root.1
[2024-05-19 11:18:39] -rw-r--r-- 2 boinc boinc     17537 May 19 08:59 start_atlas.sh
[2024-05-19 11:18:39] drwxrwx--x 2 boinc boinc      4096 May 19 08:59 shared
[2024-05-19 11:18:39] -rw-r--r-- 2 boinc boinc    480006 May 19 08:59 input.tar.gz
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc         0 May 19 08:59 boinc_lockfile
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc      2639 May 19 08:59 pandaJob.out
[2024-05-19 11:18:39] -rw------- 1 boinc boinc       424 May 19 08:59 setup.sh.local
[2024-05-19 11:18:39] -rw------- 1 boinc boinc   1013987 May 19 08:59 agis_schedconf.cvmfs.json
[2024-05-19 11:18:39] -rw------- 1 boinc boinc         0 May 19 08:59 agis_ddmendpoints.agis.ALL.json
[2024-05-19 11:18:39] -rw------- 1 boinc boinc   1324701 May 19 08:59 cric_ddmendpoints.json
[2024-05-19 11:18:39] drwx------ 4 boinc boinc      4096 May 19 08:59 pilot3
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc      6651 May 19 09:17 init_data.xml
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc       530 May 19 11:17 boinc_task_state.xml
[2024-05-19 11:18:39] -rw------- 1 boinc boinc 226067534 May 19 11:17 HITS.38776104._009845.pool.root.1
[2024-05-19 11:18:39] -rw------- 1 boinc boinc        95 May 19 11:17 pilot_heartbeat.json
[2024-05-19 11:18:39] -rw------- 1 boinc boinc      1040 May 19 11:18 memory_monitor_summary.json
[2024-05-19 11:18:39] -rw------- 1 boinc boinc    271112 May 19 11:18 log.38776104._009845.job.log.tgz.1
[2024-05-19 11:18:39] -rw------- 1 boinc boinc      7709 May 19 11:18 heartbeat.json
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc      8192 May 19 11:18 boinc_mmap_file
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc        27 May 19 11:18 wrapper_checkpoint.txt
[2024-05-19 11:18:39] -rw------- 1 boinc boinc      4223 May 19 11:18 pilotlog.txt
[2024-05-19 11:18:39] -rw------- 1 boinc boinc    881455 May 19 11:18 log.38776104._009845.job.log.1
[2024-05-19 11:18:39] -rw------- 1 boinc boinc       357 May 19 11:18 output.list
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc       620 May 19 11:18 runtime_log
[2024-05-19 11:18:39] -rw------- 1 boinc boinc   1167360 May 19 11:18 result.tar.gz
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc     11428 May 19 11:18 runtime_log.err
[2024-05-19 11:18:39] -rw------- 1 boinc boinc       656 May 19 11:18 kgyLDmh1pR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWZPKDmUGkyfn.diag
[2024-05-19 11:18:39] -rw-r--r-- 1 boinc boinc     21348 May 19 11:18 stderr.txt
[2024-05-19 11:18:39] HITS file was successfully produced:
[2024-05-19 11:18:39] -rw------- 1 boinc boinc 226067534 May 19 11:17 shared/HITS.pool.root.1
[2024-05-19 11:18:39]  *** Contents of shared directory: ***
[2024-05-19 11:18:39] total 806968
[2024-05-19 11:18:39] -rw-r--r-- 2 boinc boinc 598581468 May 19 08:59 ATLAS.root_0
[2024-05-19 11:18:39] -rw-r--r-- 2 boinc boinc     17537 May 19 08:59 start_atlas.sh
[2024-05-19 11:18:39] -rw-r--r-- 2 boinc boinc    480006 May 19 08:59 input.tar.gz
[2024-05-19 11:18:39] -rw------- 1 boinc boinc 226067534 May 19 11:17 HITS.pool.root.1
[2024-05-19 11:18:39] -rw------- 1 boinc boinc   1167360 May 19 11:18 result.tar.gz
11:18:41 (1106103): run_atlas exited; CPU time 29744.809531
11:18:41 (1106103): called boinc_finish(0)

</stderr_txt>
]]>

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