Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:21:06 (984043): wrapper (7.7.26015): starting
12:21:06 (984043): wrapper: running run_atlas (--nthreads 8)
[2024-05-16 12:21:06] Arguments: --nthreads 8
[2024-05-16 12:21:06] Threads: 8
[2024-05-16 12:21:06] Checking for CVMFS
[2024-05-16 12:21:06] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 12:21:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 12:21:06] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 12:21:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 12:21:07] 2.11.2.0 464178 117 56896 132807 2 60 10645783 18432000 3584 130560 0 672498 99.991 40739 67898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-16 12:21:07] CVMFS is ok
[2024-05-16 12:21:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 12:21:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 12:21:07] Further information can be found at the LHC@home message board.
[2024-05-16 12:21:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 12:21:07] Checking for apptainer binary...
[2024-05-16 12:21:07] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 12:21:07] Running /usr/bin/apptainer --version
[2024-05-16 12:21:07] apptainer version 1.2.4-1.el7
[2024-05-16 12:21:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 12:21:08] gc-9-36.aglt2.org
[2024-05-16 12:21:08] apptainer works
[2024-05-16 12:21:08] Set ATHENA_PROC_NUMBER=8
[2024-05-16 12:21:08] Set ATHENA_CORE_NUMBER=8
[2024-05-16 12:21:08] Starting ATLAS job with PandaID=6207333754
[2024-05-16 12:21:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/data/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 13:53:57]  *** The last 200 lines of the pilot log: ***
[2024-05-16 13:53:57]  mtime=0
[2024-05-16 13:53:57]  protocol_id=None
[2024-05-16 13:53:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-16 13:53:57]  replicas=None
[2024-05-16 13:53:57]  scope=mc23_13p6TeV
[2024-05-16 13:53:57]  status=None
[2024-05-16 13:53:57]  status_code=0
[2024-05-16 13:53:57]  storage_token=
[2024-05-16 13:53:57]  surl=/data/boinchome/slots/1/PanDA_Pilot-6207333754/log.38776104._009762.job.log.tgz.1
[2024-05-16 13:53:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/a6/log.38776104._009762.job.log.tgz.1
[2024-05-16 13:53:57]  workdir=None
[2024-05-16 13:53:57] ]
[2024-05-16 13:53:57] 2024-05-16 17:53:27,790 | INFO     | transferring file log.38776104._009762.job.log.tgz.1 from /data/boinchome/slots/1/PanDA_Pilot-6207333754/log.38776104._009762.job.log.tgz.1 to /data/boinchome/slot
[2024-05-16 13:53:57] 2024-05-16 17:53:27,790 | INFO     | executing command: /usr/bin/env mv /data/boinchome/slots/1/PanDA_Pilot-6207333754/log.38776104._009762.job.log.tgz.1 /data/boinchome/slots/1/log.38776104._009762.j
[2024-05-16 13:53:57] 2024-05-16 17:53:27,870 | INFO     | adding to output.list: log.38776104._009762.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2d/a6/log.38776104._009762.job.log.tg
[2024-05-16 13:53:57] 2024-05-16 17:53:27,870 | INFO     | summary of transferred files:
[2024-05-16 13:53:57] 2024-05-16 17:53:27,870 | INFO     |  -- lfn=log.38776104._009762.job.log.tgz.1, status_code=0, status=transferred
[2024-05-16 13:53:57] 2024-05-16 17:53:27,871 | INFO     | stage-out finished correctly
[2024-05-16 13:53:57] 2024-05-16 17:53:30,145 | WARNING  | process 994732 is no longer using CPU - aborting
[2024-05-16 13:53:57] 2024-05-16 17:53:30,146 | INFO     | will not send any job update
[2024-05-16 13:53:57] 2024-05-16 17:53:31,372 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-16 13:53:57] 2024-05-16 17:53:32,650 | INFO     | monitor loop #419: job 0:6207333754 is in state 'finished'
[2024-05-16 13:53:57] 2024-05-16 17:53:32,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 13:53:57] 2024-05-16 17:53:33,870 | INFO     | job 6207333754 has state=finished
[2024-05-16 13:53:57] 2024-05-16 17:53:33,870 | INFO     | preparing for final server update for job 6207333754 in state='finished'
[2024-05-16 13:53:57] 2024-05-16 17:53:33,871 | INFO     | this job has now completed (state=finished)
[2024-05-16 13:53:57] 2024-05-16 17:53:33,871 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 13:53:57] 2024-05-16 17:53:33,871 | INFO     | job 6207333754 has finished - writing final server update
[2024-05-16 13:53:57] 2024-05-16 17:53:33,871 | INFO     | total number of processed events: 400 (read)
[2024-05-16 13:53:57] 2024-05-16 17:53:33,881 | INFO     | executing command: lscpu
[2024-05-16 13:53:57] 2024-05-16 17:53:33,959 | INFO     | found 24 cores (12 cores per socket, 2 sockets)
[2024-05-16 13:53:57] 2024-05-16 17:53:33,959 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 13:53:57] 2024-05-16 17:53:34,088 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 13:53:57] 2024-05-16 17:53:35,156 | INFO     | monitor loop #420: job 0:6207333754 is in state 'finished'
[2024-05-16 13:53:57] 2024-05-16 17:53:35,156 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 13:53:57] 2024-05-16 17:53:37,659 | INFO     | monitor loop #421: job 0:6207333754 is in state 'finished'
[2024-05-16 13:53:57] 2024-05-16 17:53:37,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 13:53:57] 2024-05-16 17:53:39,683 | INFO     | 5543s have passed since pilot start
[2024-05-16 13:53:57] 2024-05-16 17:53:40,164 | INFO     | monitor loop #422: job 0:6207333754 is in state 'finished'
[2024-05-16 13:53:57] 2024-05-16 17:53:40,164 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 13:53:57] 2024-05-16 17:53:42,671 | INFO     | monitor loop #423: job 0:6207333754 is in state 'finished'
[2024-05-16 13:53:57] 2024-05-16 17:53:42,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 13:53:57] 2024-05-16 17:53:43,829 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-16 13:53:57] 2024-05-16 17:53:43,830 | INFO     | using path: /data/boinchome/slots/1/PanDA_Pilot-6207333754/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 13:53:57] 2024-05-16 17:53:43,830 | INFO     | extracted standard info from prmon json
[2024-05-16 13:53:57] 2024-05-16 17:53:43,830 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 13:53:57] 2024-05-16 17:53:43,831 | WARNING  | GPU info not found in prmon json
[2024-05-16 13:53:57] 2024-05-16 17:53:43,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 13:53:57] 2024-05-16 17:53:43,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 13:53:57] 2024-05-16 17:53:43,833 | INFO     | fitting pss+swap vs Time
[2024-05-16 13:53:57] 2024-05-16 17:53:43,833 | INFO     | model: linear, x: [1715876807.0, 1715876868.0, 1715876929.0, 1715876990.0, 1715877051.0, 1715877112.0, 1715877173.0, 1715877234.0, 1715877295.0, 1715877356.0, 1715
[2024-05-16 13:53:57] 2024-05-16 17:53:43,833 | INFO     | sum of square deviations: 183761585.0
[2024-05-16 13:53:57] 2024-05-16 17:53:43,834 | INFO     | sum of deviations: -3177447818.5
[2024-05-16 13:53:57] 2024-05-16 17:53:43,834 | INFO     | mean x: 1715879338.5
[2024-05-16 13:53:57] 2024-05-16 17:53:43,834 | INFO     | mean y: 2589548.1785714286
[2024-05-16 13:53:57] 2024-05-16 17:53:43,834 | INFO     | -- intersect: 29672104321.49775
[2024-05-16 13:53:57] 2024-05-16 17:53:43,834 | INFO     | intersect: 29672104321.49775
[2024-05-16 13:53:57] 2024-05-16 17:53:43,834 | INFO     | chi2: 0.03656061618061335
[2024-05-16 13:53:57] 2024-05-16 17:53:43,834 | INFO     | -- intersect: 29672104321.49775
[2024-05-16 13:53:57] 2024-05-16 17:53:43,834 | INFO     | current memory leak: -17.29 B/s (using 84 data points, chi2=0.04)
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | ..............................
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | . Timing measurements:
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | . get job = 0 s
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | . initial setup = 1 s
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | . payload setup = 4 s
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | . stage-in = 0 s
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | . payload execution = 5506 s
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | . stage-out = 1 s
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | . log creation = 0 s
[2024-05-16 13:53:57] 2024-05-16 17:53:43,835 | INFO     | ..............................
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | 
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | job summary report
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | --------------------------------------------------
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | PanDA job id: 6207333754
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | task id: 38776104
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | errors: (none)
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | pilot state: finished 
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | transexitcode: 0
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | exeerrorcode: 0
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | exeerrordiag: 
[2024-05-16 13:53:57] 2024-05-16 17:53:43,924 | INFO     | exitcode: 0
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | exitmsg: OK
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | cpuconsumptiontime: 35545 s
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | nevents: 400
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | neventsw: 0
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | pid: 994732
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | pgrp: 994732
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | corecount: 8
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | event service: False
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | sizes: {0: 2392152, 4: 2392358, 11: 2392386, 5515: 2418912, 5516: 2427874, 5520: 2427930, 5532: 2428228}
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | --------------------------------------------------
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | 
[2024-05-16 13:53:57] 2024-05-16 17:53:43,925 | INFO     | executing command: ls -lF /data/boinchome/slots/1
[2024-05-16 13:53:57] 2024-05-16 17:53:43,948 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,948 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,948 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,948 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 13:53:57] 2024-05-16 17:53:43,949 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,950 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 13:53:57] 2024-05-16 17:53:43,950 | INFO     | job 6207333754 has completed (purged errors)
[2024-05-16 13:53:57] 2024-05-16 17:53:43,950 | INFO     | overall cleanup function is called
[2024-05-16 13:53:57] 2024-05-16 17:53:44,962 | INFO     | --- collectZombieJob: --- 10, [994732]
[2024-05-16 13:53:57] 2024-05-16 17:53:44,962 | INFO     | zombie collector waiting for pid 994732
[2024-05-16 13:53:57] 2024-05-16 17:53:44,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 13:53:57] 2024-05-16 17:53:45,967 | INFO     | collected zombie processes
[2024-05-16 13:53:57] 2024-05-16 17:53:45,967 | INFO     | will now attempt to kill all subprocesses of pid=994732
[2024-05-16 13:53:57] 2024-05-16 17:53:46,075 | INFO     | process IDs to be killed: [994732] (in reverse order)
[2024-05-16 13:53:57] 2024-05-16 17:53:46,143 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 13:53:57] 2024-05-16 17:53:46,143 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 13:53:57] 2024-05-16 17:53:46,148 | INFO     | did not find any defunct processes belonging to 994732
[2024-05-16 13:53:57] 2024-05-16 17:53:46,153 | INFO     | did not find any defunct processes belonging to 994732
[2024-05-16 13:53:57] 2024-05-16 17:53:46,154 | INFO     | ready for new job
[2024-05-16 13:53:57] 2024-05-16 17:53:46,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 13:53:57] 2024-05-16 17:53:46,155 | INFO     | *************************************
[2024-05-16 13:53:57] 2024-05-16 17:53:46,155 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 13:53:57] 2024-05-16 17:53:46,155 | INFO     | *************************************
[2024-05-16 13:53:57] 2024-05-16 17:53:46,155 | INFO     | 
[2024-05-16 13:53:57] 2024-05-16 17:53:46,157 | INFO     | architecture information:
[2024-05-16 13:53:57] 2024-05-16 17:53:46,158 | INFO     | executing command: cat /etc/os-release
[2024-05-16 13:53:57] 2024-05-16 17:53:46,173 | INFO     | cat /etc/os-release:
[2024-05-16 13:53:57] NAME="CentOS Linux"
[2024-05-16 13:53:57] VERSION="7 (Core)"
[2024-05-16 13:53:57] ID="centos"
[2024-05-16 13:53:57] ID_LIKE="rhel fedora"
[2024-05-16 13:53:57] VERSION_ID="7"
[2024-05-16 13:53:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 13:53:57] ANSI_COLOR="0;31"
[2024-05-16 13:53:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 13:53:57] HOME_URL="https://www.centos.org/"
[2024-05-16 13:53:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 13:53:57] 
[2024-05-16 13:53:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 13:53:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 13:53:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 13:53:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 13:53:57] 
[2024-05-16 13:53:57] 2024-05-16 17:53:46,174 | INFO     | *************************************
[2024-05-16 13:53:57] 2024-05-16 17:53:46,677 | INFO     | executing command: df -mP /data/boinchome/slots/1
[2024-05-16 13:53:57] 2024-05-16 17:53:46,696 | INFO     | sufficient remaining disk space (905781968896 B)
[2024-05-16 13:53:57] 2024-05-16 17:53:46,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 13:53:57] 2024-05-16 17:53:46,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 13:53:57] 2024-05-16 17:53:46,696 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 13:53:57] 2024-05-16 17:53:46,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 13:53:57] 2024-05-16 17:53:46,697 | INFO     | aborting loop
[2024-05-16 13:53:57] 2024-05-16 17:53:46,697 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 13:53:57] 2024-05-16 17:53:46,711 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 13:53:57] 2024-05-16 17:53:46,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 13:53:57] 2024-05-16 17:53:46,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 13:53:57] 2024-05-16 17:53:47,168 | INFO     | all data control threads have been joined
[2024-05-16 13:53:57] 2024-05-16 17:53:47,187 | INFO     | all payload control threads have been joined
[2024-05-16 13:53:57] 2024-05-16 17:53:47,529 | INFO     | all job control threads have been joined
[2024-05-16 13:53:57] 2024-05-16 17:53:47,702 | INFO     | [job] job monitor thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:47,702 | INFO     | [job] retrieve thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:47,762 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:47,796 | INFO     | [job] validate thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,172 | INFO     | [data] control thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,192 | INFO     | [payload] control thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,535 | INFO     | [job] control thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,633 | INFO     | [payload] validate_post thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,704 | INFO     | [data] copytool_out thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,735 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,772 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,773 | INFO     | [payload] failed_post thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,810 | INFO     | [data] copytool_in thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:48,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 13:53:57] 2024-05-16 17:53:48,946 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:49,941 | INFO     | [job] queue monitor thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:50,704 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 13:53:57] 2024-05-16 17:53:51,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962708371264)>', '<ExcThread(monitor, started 139962288686848)>']
[2024-05-16 13:53:57] 2024-05-16 17:53:51,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 13:53:57] 2024-05-16 17:53:51,740 | INFO     | [monitor] control thread has ended
[2024-05-16 13:53:57] 2024-05-16 17:53:56,511 | INFO     | all workflow threads have been joined
[2024-05-16 13:53:57] 2024-05-16 17:53:56,511 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 13:53:57] 2024-05-16 17:53:56,511 | INFO     | traces error code: 0
[2024-05-16 13:53:57] 2024-05-16 17:53:56,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 13:53:57] 2024-05-16 17:53:56,577 [wrapper] ==== pilot stdout END ====
[2024-05-16 13:53:57] 2024-05-16 17:53:56,580 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 13:53:57] 2024-05-16 17:53:56,582 [wrapper] pilotpid: 988269
[2024-05-16 13:53:57] 2024-05-16 17:53:56,585 [wrapper] Pilot exit status: 0
[2024-05-16 13:53:57] 2024-05-16 17:53:56,608 [wrapper] pandaids: 6207333754
[2024-05-16 13:53:57] 2024-05-16 17:53:56,662 [wrapper] cleanup: SIGTERM to supervisor_pilot 1389940 988270
[2024-05-16 13:53:57] 2024-05-16 17:53:56,665 [wrapper] Test setup, not cleaning
[2024-05-16 13:53:57] 2024-05-16 17:53:56,667 [wrapper] ==== wrapper stdout END ====
[2024-05-16 13:53:57] 2024-05-16 17:53:56,672 [wrapper] ==== wrapper stderr END ====
[2024-05-16 13:53:57] 2024-05-16 17:53:56,683 [wrapper] apfmon messages muted
[2024-05-16 13:53:57]  *** Error codes and diagnostics ***
[2024-05-16 13:53:57]     "exeErrorCode": 0,
[2024-05-16 13:53:57]     "exeErrorDiag": "",
[2024-05-16 13:53:57]     "pilotErrorCode": 0,
[2024-05-16 13:53:57]     "pilotErrorDiag": "",
[2024-05-16 13:53:57]  *** Listing of results directory ***
[2024-05-16 13:53:57] total 814388
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas    467845 May 16 07:34 pilot3.tar.gz
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas      5633 May 16 08:13 queuedata.json
[2024-05-16 13:53:57] -rwx------ 1 boincer umatlas     32251 May 16 08:14 runpilot2-wrapper.sh
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas       100 May 16 12:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 13:53:57] -rwxr-xr-x 1 boincer umatlas      7986 May 16 12:20 run_atlas
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas       105 May 16 12:20 job.xml
[2024-05-16 13:53:57] -rw-r--r-- 2 boincer umatlas 600317001 May 16 12:21 EVNT.38776100._000384.pool.root.1
[2024-05-16 13:53:57] -rw-r--r-- 2 boincer umatlas     17537 May 16 12:21 start_atlas.sh
[2024-05-16 13:53:57] drwxrwx--x 2 boincer umatlas      4096 May 16 12:21 shared
[2024-05-16 13:53:57] -rw-r--r-- 2 boincer umatlas    480006 May 16 12:21 input.tar.gz
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas         0 May 16 12:21 boinc_lockfile
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas      2640 May 16 12:21 pandaJob.out
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas       461 May 16 12:21 setup.sh.local
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas   1018958 May 16 12:21 agis_schedconf.cvmfs.json
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas         0 May 16 12:21 agis_ddmendpoints.agis.ALL.json
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas   1324701 May 16 12:21 cric_ddmendpoints.json
[2024-05-16 13:53:57] drwx------ 4 boincer umatlas      4096 May 16 12:21 pilot3
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas      9220 May 16 13:47 init_data.xml
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas 228297835 May 16 13:52 HITS.38776104._009762.pool.root.1
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas       530 May 16 13:52 boinc_task_state.xml
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas      1045 May 16 13:53 memory_monitor_summary.json
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas    321544 May 16 13:53 log.38776104._009762.job.log.tgz.1
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas        95 May 16 13:53 pilot_heartbeat.json
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas      7746 May 16 13:53 heartbeat.json
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas      8192 May 16 13:53 boinc_mmap_file
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas        27 May 16 13:53 wrapper_checkpoint.txt
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas      4213 May 16 13:53 pilotlog.txt
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas    571496 May 16 13:53 log.38776104._009762.job.log.1
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas       357 May 16 13:53 output.list
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas       620 May 16 13:53 runtime_log
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas    911360 May 16 13:53 result.tar.gz
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas     11381 May 16 13:53 runtime_log.err
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas       645 May 16 13:53 HIULDmbBpR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmmYPKDmmtl0Dm.diag
[2024-05-16 13:53:57] -rw-r--r-- 1 boincer umatlas     21690 May 16 13:53 stderr.txt
[2024-05-16 13:53:57] HITS file was successfully produced:
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas 228297835 May 16 13:52 shared/HITS.pool.root.1
[2024-05-16 13:53:57]  *** Contents of shared directory: ***
[2024-05-16 13:53:57] total 810588
[2024-05-16 13:53:57] -rw-r--r-- 2 boincer umatlas 600317001 May 16 12:21 ATLAS.root_0
[2024-05-16 13:53:57] -rw-r--r-- 2 boincer umatlas     17537 May 16 12:21 start_atlas.sh
[2024-05-16 13:53:57] -rw-r--r-- 2 boincer umatlas    480006 May 16 12:21 input.tar.gz
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas 228297835 May 16 13:52 HITS.pool.root.1
[2024-05-16 13:53:57] -rw------- 1 boincer umatlas    911360 May 16 13:53 result.tar.gz
13:53:58 (984043): run_atlas exited; CPU time 35434.055998
13:53:58 (984043): called boinc_finish(0)

</stderr_txt>
]]>

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