Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:21:04 (986308): wrapper (7.7.26015): starting
03:21:04 (986308): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 03:21:04] Arguments: --nthreads 4
[2024-05-20 03:21:04] Threads: 4
[2024-05-20 03:21:04] Checking for CVMFS
[2024-05-20 03:21:04] No cvmfs_config command found, will try listing directly
[2024-05-20 03:21:04] CVMFS is ok
[2024-05-20 03:21:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 03:21:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 03:21:04] Further information can be found at the LHC@home message board.
[2024-05-20 03:21:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 03:21:04] Checking for apptainer binary...
[2024-05-20 03:21:04] which: no apptainer in ((null))
[2024-05-20 03:21:04] apptainer is not installed, using version from CVMFS
[2024-05-20 03:21:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 03:21:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-20 03:21:05] apptainer works
[2024-05-20 03:21:05] Set ATHENA_PROC_NUMBER=4
[2024-05-20 03:21:05] Set ATHENA_CORE_NUMBER=4
[2024-05-20 03:21:05] Starting ATLAS job with PandaID=6207333141
[2024-05-20 03:21:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 06:07:52]  *** The last 200 lines of the pilot log: ***
[2024-05-20 06:07:52]  direct_access_wan=False
[2024-05-20 06:07:52]  domain=
[2024-05-20 06:07:52]  filesize=276800
[2024-05-20 06:07:52]  filetype=log
[2024-05-20 06:07:52]  guid=129d724b-8bf6-4382-99ae-f868a77781ed
[2024-05-20 06:07:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-20 06:07:52]  is_tar=False
[2024-05-20 06:07:52]  lfn=log.38776104._009669.job.log.tgz.1
[2024-05-20 06:07:52]  mtime=0
[2024-05-20 06:07:52]  protocol_id=None
[2024-05-20 06:07:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-20 06:07:52]  replicas=None
[2024-05-20 06:07:52]  scope=mc23_13p6TeV
[2024-05-20 06:07:52]  status=None
[2024-05-20 06:07:52]  status_code=0
[2024-05-20 06:07:52]  storage_token=
[2024-05-20 06:07:52]  surl=/scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6207333141/log.38776104._009669.job.log.tgz.1
[2024-05-20 06:07:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/48/log.38776104._009669.job.log.tgz.1
[2024-05-20 06:07:52]  workdir=None
[2024-05-20 06:07:52] ]
[2024-05-20 06:07:52] 2024-05-20 04:07:21,855 | INFO     | transferring file log.38776104._009669.job.log.tgz.1 from /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6207333141/log.38776104._009669.job.log.tgz.1 to /scratch/b
[2024-05-20 06:07:52] 2024-05-20 04:07:21,856 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6207333141/log.38776104._009669.job.log.tgz.1 /scratch/boinc/var/slot56/slots/0/lo
[2024-05-20 06:07:52] 2024-05-20 04:07:21,874 | INFO     | adding to output.list: log.38776104._009669.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6d/48/log.38776104._009669.job.log.tg
[2024-05-20 06:07:52] 2024-05-20 04:07:21,875 | INFO     | summary of transferred files:
[2024-05-20 06:07:52] 2024-05-20 04:07:21,875 | INFO     |  -- lfn=log.38776104._009669.job.log.tgz.1, status_code=0, status=transferred
[2024-05-20 06:07:52] 2024-05-20 04:07:21,875 | INFO     | stage-out finished correctly
[2024-05-20 06:07:52] 2024-05-20 04:07:21,983 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-20 06:07:52] 2024-05-20 04:07:22,034 | INFO     | job 6207333141 has state=finished
[2024-05-20 06:07:52] 2024-05-20 04:07:22,034 | INFO     | preparing for final server update for job 6207333141 in state='finished'
[2024-05-20 06:07:52] 2024-05-20 04:07:22,040 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /scratch/boinc/var/slot56/slots/0/PanDA_Pilot
[2024-05-20 06:07:52] 2024-05-20 04:07:27,177 | INFO     | this job has now completed (state=finished)
[2024-05-20 06:07:52] 2024-05-20 04:07:27,178 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-20 06:07:52] 2024-05-20 04:07:27,184 | INFO     | job 6207333141 has finished - writing final server update
[2024-05-20 06:07:52] 2024-05-20 04:07:27,185 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2290861/.job.ad'
[2024-05-20 06:07:52] 2024-05-20 04:07:27,185 | INFO     | total number of processed events: 400 (read)
[2024-05-20 06:07:52] 2024-05-20 04:07:27,190 | INFO     | executing command: lscpu
[2024-05-20 06:07:52] 2024-05-20 04:07:27,321 | WARNING  | process 998138 is no longer using CPU - aborting
[2024-05-20 06:07:52] 2024-05-20 04:07:27,322 | INFO     | will not send any job update
[2024-05-20 06:07:52] 2024-05-20 04:07:27,363 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-05-20 06:07:52] 2024-05-20 04:07:27,363 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-20 06:07:52] 2024-05-20 04:07:27,394 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-20 06:07:52] 2024-05-20 04:07:29,825 | INFO     | monitor loop #770: job 0:6207333141 is in state 'finished'
[2024-05-20 06:07:52] 2024-05-20 04:07:29,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,359 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-20 06:07:52] 2024-05-20 04:07:30,359 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6207333141/memory_monitor_summary.json (trf name=prmon)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,360 | INFO     | extracted standard info from prmon json
[2024-05-20 06:07:52] 2024-05-20 04:07:30,360 | INFO     | extracted standard memory fields from prmon json
[2024-05-20 06:07:52] 2024-05-20 04:07:30,360 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 06:07:52] 2024-05-20 04:07:30,361 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 06:07:52] 2024-05-20 04:07:30,362 | INFO     | fitting pss+swap vs Time
[2024-05-20 06:07:52] 2024-05-20 04:07:30,364 | INFO     | current chi2=4.463252533180057 (change=-0.17353780924427065 %)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,364 | INFO     | right removable region: 157
[2024-05-20 06:07:52] 2024-05-20 04:07:30,364 | INFO     | current chi2=1.7983143919403821 (change=59.63851173673201 %)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,365 | INFO     | current chi2=0.21113938395635162 (change=88.25903941476373 %)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,365 | INFO     | current chi2=0.13204323339276788 (change=37.46158063051615 %)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,366 | INFO     | current chi2=0.12943433555546732 (change=1.9757906333149915 %)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,366 | INFO     | left removable region: 40
[2024-05-20 06:07:52] 2024-05-20 04:07:30,366 | INFO     | current memory leak: -8.83 B/s (using 117 data points, chi2=0.06)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | ..............................
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | . Timing measurements:
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | . get job = 0 s
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | . initial setup = 1 s
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | . payload setup = 4 s
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | . stage-in = 0 s
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | . payload execution = 9944 s
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | . stage-out = 0 s
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | . log creation = 0 s
[2024-05-20 06:07:52] 2024-05-20 04:07:30,367 | INFO     | ..............................
[2024-05-20 06:07:52] 2024-05-20 04:07:30,605 | INFO     | 
[2024-05-20 06:07:52] 2024-05-20 04:07:30,605 | INFO     | job summary report
[2024-05-20 06:07:52] 2024-05-20 04:07:30,605 | INFO     | --------------------------------------------------
[2024-05-20 06:07:52] 2024-05-20 04:07:30,605 | INFO     | PanDA job id: 6207333141
[2024-05-20 06:07:52] 2024-05-20 04:07:30,605 | INFO     | task id: 38776104
[2024-05-20 06:07:52] 2024-05-20 04:07:30,605 | INFO     | errors: (none)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,605 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 06:07:52] 2024-05-20 04:07:30,605 | INFO     | pilot state: finished 
[2024-05-20 06:07:52] 2024-05-20 04:07:30,605 | INFO     | transexitcode: 0
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | exeerrorcode: 0
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | exeerrordiag: 
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | exitcode: 0
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | exitmsg: OK
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | cpuconsumptiontime: 37059 s
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | nevents: 400
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | neventsw: 0
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | pid: 998138
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | pgrp: 998138
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | corecount: 4
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | event service: False
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | sizes: {0: 2392208, 4: 2392414, 11: 2392442, 9953: 2421052, 9954: 2430090, 9962: 2430204}
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | --------------------------------------------------
[2024-05-20 06:07:52] 2024-05-20 04:07:30,606 | INFO     | 
[2024-05-20 06:07:52] 2024-05-20 04:07:30,607 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2024-05-20 06:07:52] 2024-05-20 04:07:30,627 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,627 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,627 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,627 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,628 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 06:07:52] 2024-05-20 04:07:30,629 | INFO     | job 6207333141 has completed (purged errors)
[2024-05-20 06:07:52] 2024-05-20 04:07:30,629 | INFO     | overall cleanup function is called
[2024-05-20 06:07:52] 2024-05-20 04:07:31,635 | INFO     | --- collectZombieJob: --- 10, [998138]
[2024-05-20 06:07:52] 2024-05-20 04:07:31,636 | INFO     | zombie collector waiting for pid 998138
[2024-05-20 06:07:52] 2024-05-20 04:07:31,636 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 06:07:52] 2024-05-20 04:07:32,641 | INFO     | collected zombie processes
[2024-05-20 06:07:52] 2024-05-20 04:07:32,641 | INFO     | will now attempt to kill all subprocesses of pid=998138
[2024-05-20 06:07:52] 2024-05-20 04:07:32,787 | INFO     | process IDs to be killed: [998138] (in reverse order)
[2024-05-20 06:07:52] 2024-05-20 04:07:32,915 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 06:07:52] 2024-05-20 04:07:32,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 06:07:52] 2024-05-20 04:07:32,922 | INFO     | did not find any defunct processes belonging to 998138
[2024-05-20 06:07:52] 2024-05-20 04:07:32,928 | INFO     | did not find any defunct processes belonging to 998138
[2024-05-20 06:07:52] 2024-05-20 04:07:32,928 | INFO     | ready for new job
[2024-05-20 06:07:52] 2024-05-20 04:07:32,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 06:07:52] 2024-05-20 04:07:32,930 | INFO     | *************************************
[2024-05-20 06:07:52] 2024-05-20 04:07:32,930 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-05-20 06:07:52] 2024-05-20 04:07:32,930 | INFO     | *************************************
[2024-05-20 06:07:52] 2024-05-20 04:07:32,930 | INFO     | 
[2024-05-20 06:07:52] 2024-05-20 04:07:32,933 | INFO     | architecture information:
[2024-05-20 06:07:52] 2024-05-20 04:07:32,933 | INFO     | executing command: cat /etc/os-release
[2024-05-20 06:07:52] 2024-05-20 04:07:32,947 | INFO     | cat /etc/os-release:
[2024-05-20 06:07:52] NAME="CentOS Linux"
[2024-05-20 06:07:52] VERSION="7 (Core)"
[2024-05-20 06:07:52] ID="centos"
[2024-05-20 06:07:52] ID_LIKE="rhel fedora"
[2024-05-20 06:07:52] VERSION_ID="7"
[2024-05-20 06:07:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 06:07:52] ANSI_COLOR="0;31"
[2024-05-20 06:07:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 06:07:52] HOME_URL="https://www.centos.org/"
[2024-05-20 06:07:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 06:07:52] 
[2024-05-20 06:07:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 06:07:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 06:07:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 06:07:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 06:07:52] 
[2024-05-20 06:07:52] 2024-05-20 04:07:32,947 | INFO     | *************************************
[2024-05-20 06:07:52] 2024-05-20 04:07:33,450 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2024-05-20 06:07:52] 2024-05-20 04:07:33,472 | INFO     | sufficient remaining disk space (593257037824 B)
[2024-05-20 06:07:52] 2024-05-20 04:07:33,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 06:07:52] 2024-05-20 04:07:33,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 06:07:52] 2024-05-20 04:07:33,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 06:07:52] 2024-05-20 04:07:33,474 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 06:07:52] 2024-05-20 04:07:33,474 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 06:07:52] 2024-05-20 04:07:33,474 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 06:07:52] 2024-05-20 04:07:33,475 | INFO     | aborting loop
[2024-05-20 06:07:52] 2024-05-20 04:07:33,475 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 06:07:52] 2024-05-20 04:07:33,475 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 06:07:52] 2024-05-20 04:07:34,145 | INFO     | all payload control threads have been joined
[2024-05-20 06:07:52] 2024-05-20 04:07:34,236 | INFO     | all data control threads have been joined
[2024-05-20 06:07:52] 2024-05-20 04:07:34,479 | INFO     | [job] retrieve thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:34,481 | INFO     | [job] job monitor thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:34,499 | INFO     | all job control threads have been joined
[2024-05-20 06:07:52] 2024-05-20 04:07:34,624 | INFO     | [job] validate thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:34,839 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:34,880 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:34,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 06:07:52] 2024-05-20 04:07:35,035 | INFO     | [payload] validate_post thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:35,151 | INFO     | [payload] control thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:35,238 | INFO     | [data] control thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:35,427 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 06:07:52] 2024-05-20 04:07:35,505 | INFO     | [job] control thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:35,654 | INFO     | [data] copytool_in thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:35,678 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:36,003 | INFO     | [payload] failed_post thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:36,432 | INFO     | [job] queue monitor thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:36,955 | INFO     | [data] copytool_out thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:37,475 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:44,065 | INFO     | job.realtimelogging is not enabled
[2024-05-20 06:07:52] 2024-05-20 04:07:45,071 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 06:07:52] 2024-05-20 04:07:46,695 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47795052491840)>', '<ExcThread(monitor, started 47795223725824)>']
[2024-05-20 06:07:52] 2024-05-20 04:07:47,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 06:07:52] 2024-05-20 04:07:47,537 | INFO     | [monitor] control thread has ended
[2024-05-20 06:07:52] 2024-05-20 04:07:51,720 | INFO     | all workflow threads have been joined
[2024-05-20 06:07:52] 2024-05-20 04:07:51,721 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 06:07:52] 2024-05-20 04:07:51,721 | INFO     | traces error code: 0
[2024-05-20 06:07:52] 2024-05-20 04:07:51,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 06:07:52] 2024-05-20 04:07:51,822 [wrapper] ==== pilot stdout END ====
[2024-05-20 06:07:52] 2024-05-20 04:07:51,824 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 06:07:52] 2024-05-20 04:07:51,826 [wrapper] pilotpid: 990612
[2024-05-20 06:07:52] 2024-05-20 04:07:51,828 [wrapper] Pilot exit status: 0
[2024-05-20 06:07:52] 2024-05-20 04:07:51,836 [wrapper] pandaids: 6207333141
[2024-05-20 06:07:52] 2024-05-20 04:07:51,899 [wrapper] cleanup: SIGTERM to supervisor_pilot 1429558 990613
[2024-05-20 06:07:52] 2024-05-20 04:07:51,902 [wrapper] Test setup, not cleaning
[2024-05-20 06:07:52] 2024-05-20 04:07:51,903 [wrapper] ==== wrapper stdout END ====
[2024-05-20 06:07:52] 2024-05-20 04:07:51,905 [wrapper] ==== wrapper stderr END ====
[2024-05-20 06:07:52] 2024-05-20 04:07:51,910 [wrapper] apfmon messages muted
[2024-05-20 06:07:52]  *** Error codes and diagnostics ***
[2024-05-20 06:07:52]     "exeErrorCode": 0,
[2024-05-20 06:07:52]     "exeErrorDiag": "",
[2024-05-20 06:07:52]     "pilotErrorCode": 0,
[2024-05-20 06:07:52]     "pilotErrorDiag": "",
[2024-05-20 06:07:52]  *** Listing of results directory ***
[2024-05-20 06:07:52] total 815888
[2024-05-20 06:07:52] -rwx------ 1 boinc boinc     32251 May 16 13:19 runpilot2-wrapper.sh
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc      5633 May 16 13:19 queuedata.json
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc    468593 May 16 13:19 pilot3.tar.gz
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc       100 May 20 03:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 06:07:52] -rwxr-xr-x 1 boinc boinc      7986 May 20 03:20 run_atlas
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc       105 May 20 03:20 job.xml
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc      6663 May 20 03:21 init_data.xml
[2024-05-20 06:07:52] -rw-r--r-- 2 boinc boinc 599750250 May 20 03:21 EVNT.38776100._000381.pool.root.1
[2024-05-20 06:07:52] -rw-r--r-- 2 boinc boinc     17537 May 20 03:21 start_atlas.sh
[2024-05-20 06:07:52] drwxrwx--x 2 boinc boinc      4096 May 20 03:21 shared
[2024-05-20 06:07:52] -rw-r--r-- 2 boinc boinc    481387 May 20 03:21 input.tar.gz
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc         0 May 20 03:21 boinc_lockfile
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc      2639 May 20 03:21 pandaJob.out
[2024-05-20 06:07:52] -rw------- 1 boinc boinc       424 May 20 03:21 setup.sh.local
[2024-05-20 06:07:52] -rw------- 1 boinc boinc   1013669 May 20 03:21 agis_schedconf.cvmfs.json
[2024-05-20 06:07:52] -rw------- 1 boinc boinc         0 May 20 03:21 agis_ddmendpoints.agis.ALL.json
[2024-05-20 06:07:52] -rw------- 1 boinc boinc   1324701 May 20 03:21 cric_ddmendpoints.json
[2024-05-20 06:07:52] drwx------ 6 boinc boinc      4096 May 20 03:21 pilot3
[2024-05-20 06:07:52] -rw------- 1 boinc boinc        95 May 20 06:06 pilot_heartbeat.json
[2024-05-20 06:07:52] -rw------- 1 boinc boinc 229728131 May 20 06:06 HITS.38776104._009669.pool.root.1
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc       530 May 20 06:06 boinc_task_state.xml
[2024-05-20 06:07:52] -rw------- 1 boinc boinc      1054 May 20 06:07 memory_monitor_summary.json
[2024-05-20 06:07:52] -rw------- 1 boinc boinc    276800 May 20 06:07 log.38776104._009669.job.log.tgz.1
[2024-05-20 06:07:52] -rw------- 1 boinc boinc      7751 May 20 06:07 heartbeat.json
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc      8192 May 20 06:07 boinc_mmap_file
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc        28 May 20 06:07 wrapper_checkpoint.txt
[2024-05-20 06:07:52] -rw------- 1 boinc boinc      4416 May 20 06:07 pilotlog.txt
[2024-05-20 06:07:52] -rw------- 1 boinc boinc    956860 May 20 06:07 log.38776104._009669.job.log.1
[2024-05-20 06:07:52] -rw------- 1 boinc boinc       357 May 20 06:07 output.list
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc       620 May 20 06:07 runtime_log
[2024-05-20 06:07:52] -rw------- 1 boinc boinc   1249280 May 20 06:07 result.tar.gz
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc     11410 May 20 06:07 runtime_log.err
[2024-05-20 06:07:52] -rw------- 1 boinc boinc       657 May 20 06:07 rA2KDmHKoR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmmXPKDmkYVt9m.diag
[2024-05-20 06:07:52] -rw-r--r-- 1 boinc boinc     21138 May 20 06:07 stderr.txt
[2024-05-20 06:07:52] HITS file was successfully produced:
[2024-05-20 06:07:52] -rw------- 1 boinc boinc 229728131 May 20 06:06 shared/HITS.pool.root.1
[2024-05-20 06:07:52]  *** Contents of shared directory: ***
[2024-05-20 06:07:52] total 811760
[2024-05-20 06:07:52] -rw-r--r-- 2 boinc boinc 599750250 May 20 03:21 ATLAS.root_0
[2024-05-20 06:07:52] -rw-r--r-- 2 boinc boinc     17537 May 20 03:21 start_atlas.sh
[2024-05-20 06:07:52] -rw-r--r-- 2 boinc boinc    481387 May 20 03:21 input.tar.gz
[2024-05-20 06:07:52] -rw------- 1 boinc boinc 229728131 May 20 06:06 HITS.pool.root.1
[2024-05-20 06:07:52] -rw------- 1 boinc boinc   1249280 May 20 06:07 result.tar.gz
06:07:54 (986308): run_atlas exited; CPU time 36840.924446
06:07:54 (986308): called boinc_finish(0)

</stderr_txt>
]]>

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